BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037911
(609 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/604 (65%), Positives = 486/604 (80%), Gaps = 14/604 (2%)
Query: 14 NFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGD 73
N I+ + FS+ S L I DS +SLSNPLY+ LP+TQNPN IV+++ SSLK+ +
Sbjct: 11 NSITNSSNGRFSTQPPS-KLLAIPDSNSRSLSNPLYHLLPQTQNPNNIVNIVYSSLKQHN 69
Query: 74 SHLTLLQN---DLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYC 130
++ + L D+K LLPHLG EISRVLLRCQSDS+SALTFF+WVKNDL ++P+ NYC
Sbjct: 70 NNNSHLNLLQNDVKHLLPHLGTDEISRVLLRCQSDSISALTFFSWVKNDLGLQPSIQNYC 129
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW----------AY 180
+VHILAW+ +F AMK L EL++LVKDC + DVFQ L+ C +DCNW AY
Sbjct: 130 FLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAY 189
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G+I+E F TFRK ++VG PS++SCN LLNGLLKLN IDQCWQVY+EM R+GI PN+
Sbjct: 190 VREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNS 249
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+TFNILTHVFC++GDVDKVN FLE++EEEGF+PD+VTYNTLIS YC+KGRL+DAFYLYRI
Sbjct: 250 YTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRI 309
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
MYRRNVLPDLV+YT LMNGLCKEGKVREAHQLFHRM+HRGL+PDIVS+NTLI YCKEGK
Sbjct: 310 MYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGK 369
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+ES+SLL+EM+G+GI PD TCQ++++GY KE R++SALNLVVEL+RFGV IS DIYDY
Sbjct: 370 MRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDY 429
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+V++C++ RPFAA SLL+RI Q GYVP +EIYN+L+ESLCK DS+ADALL+K EM RN
Sbjct: 430 LMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRN 489
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
IKPS TY+ALICC C RS EA SLM+EML+SGMLPD ICR L++ YC E+D+ KAE
Sbjct: 490 IKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAE 549
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL FAK+FQI+D+ESYN + + ED D ++LMELQ R L++GFAPN T + MIH L
Sbjct: 550 TLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGL 609
Query: 601 WKGM 604
WK M
Sbjct: 610 WKAM 613
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 2/311 (0%)
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+V DL+S T N K G +RE+ + F + + G P IVS N L+ G K + +
Sbjct: 314 NVLPDLVSYTALMN-GLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRE 372
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+ EM GICP+ T +L + K + + ++E G Y+ L+
Sbjct: 373 SRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMV 432
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
S C++GR A L + + +R +P + Y L+ LCK + +A + M HR + P
Sbjct: 433 SICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKP 492
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++Y LI C+ + E++SL+ EM+ +G+ PD C+ ++ Y KE + A L+
Sbjct: 493 SAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLL 552
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ + Y+ L+ C+D L +R+ + G+ P+++ + +++ L K
Sbjct: 553 QTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKA 612
Query: 464 DSV-ADALLLK 473
+V D LLL+
Sbjct: 613 MAVEKDKLLLE 623
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/588 (66%), Positives = 483/588 (82%), Gaps = 13/588 (2%)
Query: 28 SSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQND-LKPL 86
SSS SLQ IQ+S SLSNPLY+FLPE QNPN V+LI SSLK+ ++ LTLLQND +K L
Sbjct: 31 SSSSSLQTIQNSNSISLSNPLYSFLPENQNPNNFVNLIYSSLKRDNTQLTLLQNDDIKGL 90
Query: 87 LPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAM 146
+ HLGA+EISRVLLRCQSDSVSALTFFNWVKNDL +KP++ NYCLI+H+LAW+ +F AM
Sbjct: 91 IHHLGANEISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLNYCLILHVLAWSKEFEQAM 150
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNW----------AYVKVGLIRESFKTFRKT 196
K L EL+ LVKD DVFQ L C +DCNW AYVK G+I+E F+TF +
Sbjct: 151 KFLTELILLVKDTDE--DVFQCLFLCCQDCNWDPIIFDLLLKAYVKAGMIKEGFRTFMQI 208
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L+VG+ PS+++CN+LLNGLLK N I CW VY EMGR+G+ PN++TFNILTH+FCK+GD+
Sbjct: 209 LEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHLFCKDGDI 268
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
DK+N FLEK+EEEGF+PD+VTYNTLI+ YC +GRL+DAFYLYRIMYRR VLPDLV+YT L
Sbjct: 269 DKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYTAL 328
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
MNGLCKEG+VREAHQL HRMVHRGL+PD+VSYNTLI YCKEGKM ESKSLLYEM+GNGI
Sbjct: 329 MNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGI 388
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+PD+FTC++++QGY KEG L+SALNLVVEL++FGVSIS DIYDYL+ +LC+++RPFAA +
Sbjct: 389 FPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKT 448
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LLER+ Q GY+P +EIYN+L+ESLCK D VADAL LK E+V NI P+L TY+ALI C C
Sbjct: 449 LLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLC 508
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+GRS EA LM+EML G+ PD +ICR +I+GYC EKD KAE+LL FAK+FQI+D+E
Sbjct: 509 RMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESLLVLFAKEFQIFDSE 568
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
SY+ + + EDGD++K MELQ+R L++GFAPN+LTCKYMI L K +
Sbjct: 569 SYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMIDGLRKNV 616
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Query: 162 SVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S D++ L++ C ED +A K L R S + G+ P + N L+ L K +
Sbjct: 426 SPDIYDYLVASLCEEDRPFA-AKTLLERMSQR--------GYIPHVEIYNKLIESLCKGD 476
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
C+ + E+ I PN T+ L C+ G + +E++ G PD
Sbjct: 477 CVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICR 536
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+I YC++ A L + + + D +Y+TL+ +C++G V + +L RM+
Sbjct: 537 AMIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKV 596
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
G +P+ ++ +I K + + K +L
Sbjct: 597 GFAPNSLTCKYMIDGLRKNVGLVKEKLIL 625
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/581 (65%), Positives = 473/581 (81%), Gaps = 10/581 (1%)
Query: 33 LQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA 92
LQ + S+ S+SN LY+ LP+TQNPN IV+LICS+LK+ +S+L LL ++ LLPHLGA
Sbjct: 86 LQTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLPHLGA 145
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
EISRVLLRCQSDS +AL+FFNWVKNDL ++P++ NYC+IVH LAW+ FS A+K LCEL
Sbjct: 146 QEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVHTLAWSRNFSQAIKFLCEL 205
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNW----------AYVKVGLIRESFKTFRKTLDVGFQ 202
VELVKD DVF++LI CTEDCNW AY+++G +RE ++FR+ L VGF
Sbjct: 206 VELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFV 265
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++++ N+LLNGLLKLN D+CW+VYEEM R GI PN +TFNILTHV CK+GD KVN F
Sbjct: 266 PTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKF 325
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LEK+EEEGFDPD+VTYNTLI+SYC+KGRL+DAFYLY+IMYRR V+PDLV+YT LMNGLCK
Sbjct: 326 LEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCK 385
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG+VREAHQLFHRMVHRGLSPDIV+YNTLI YCKEGKMQES+SLL++M+ NGI PD+FT
Sbjct: 386 EGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 445
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C ++V+GYGKEG+ LSALNLVVELQRFGVSIS+DIY YLIVALC++NRPFAA +LLER+
Sbjct: 446 CWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMS 505
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
QDG+ LEIYNEL++S C+CD +A+ALLLK EMVD+ IKP+L+TYRA+J C + RS
Sbjct: 506 QDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSM 565
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E SL+ EM+ SG LPD +ICR L GYC E D++KAE+LL F AK+FQI+DTES+NA+
Sbjct: 566 EGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALI 625
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + GD+++ +E+Q L++G PN LTCKY+I LWK
Sbjct: 626 RITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKA 666
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 117/305 (38%), Gaps = 71/305 (23%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ- 223
V DL+S T N K G +RE+ + F + + G P IV+ N L++G K + +
Sbjct: 369 VVPDLVSYTALMN-GLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQES 427
Query: 224 ------------------CWQVYE----------------EMGRIGICPNTHTFNILTHV 249
CW + E E+ R G+ + ++ L
Sbjct: 428 RSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVA 487
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C+ LE++ ++G +L YN LI S+C+ + +A L M + + P+
Sbjct: 488 LCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 547
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
L TY ++ L + + E L MV G PD+ L + YC+E + +++SLL
Sbjct: 548 LATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLS 607
Query: 370 -----------------------------------EMMGNGIYPDTFTCQIIVQGYGKEG 394
M+ G+ P+ TC+ ++ G K
Sbjct: 608 FXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKAR 667
Query: 395 RLLSA 399
R+ SA
Sbjct: 668 RVDSA 672
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 163 VDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
++++ +LI C DC I E+ + +D +P++ + +J L +L+
Sbjct: 513 LEIYNELIKSFCQCDC---------IAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSR 563
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + EM G P+ L + +C+ D+DK L +E D ++N
Sbjct: 564 SMEGESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNA 623
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
LI KG + + + +M + +LP+ +T +++GL K +V A
Sbjct: 624 LIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCKYVIDGLWKARRVDSA 672
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/571 (65%), Positives = 470/571 (82%), Gaps = 10/571 (1%)
Query: 33 LQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA 92
LQ + S+ S+SN LY+ LP+TQNPN IV+LICS+LK+ +S+L LL ++ LLPHLGA
Sbjct: 41 LQTLNQSQTNSISNSLYHLLPQTQNPNNIVNLICSNLKQHNSNLALLHTEVNALLPHLGA 100
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
EISRVLLRCQSDS +AL+FFNWVKNDL ++P++ NYC++VH LAW+ FS AMK LCEL
Sbjct: 101 QEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCEL 160
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNW----------AYVKVGLIRESFKTFRKTLDVGFQ 202
VELVKD S DVF++LI CTEDCNW AY+++G +RE ++FR+ L VGF
Sbjct: 161 VELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFV 220
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++++ N+LLNGLLKLN D+CW+VYEEM R GI PN +TFNILTHV CK+GD KVN F
Sbjct: 221 PTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKF 280
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LEK+EEEGFDPD+VTYNTLI+SYC+KGRL+DAFYLY+IMYRR V+PDLV+YT LMNGLCK
Sbjct: 281 LEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCK 340
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG+VREAHQLFHRMVHRGLSPDIV+YNTLI YCKEGKMQES+SLL++M+ NGI PD+FT
Sbjct: 341 EGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 400
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C ++V+GYGKEG+ LSALNLVVELQRFGVSIS+DIY YLIVALC++NRPFAA +LLER+
Sbjct: 401 CWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMS 460
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+DG+ P LEIYNEL++S C+CD +A+ALLLK EMVD+ IKP+L+TYRA+I C + RS
Sbjct: 461 KDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSM 520
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E SL+ EM+ SGMLPD +ICR L GYC E D++KAE+LL FFAK+FQI+DTES+NA+
Sbjct: 521 EGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALI 580
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ + GD+++ +E+Q L++G PN LTC
Sbjct: 581 RITSAKGDIARSLEIQDMMLKMGLLPNPLTC 611
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 165/386 (42%), Gaps = 19/386 (4%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE-------------------EGFDPD 274
+G+ P+T + I+ H + + + FL ++ E E + D
Sbjct: 128 LGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLILCTEDCNWD 187
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
V ++ L+ +Y + GR+ + +R M R +P ++T L+NGL K +++
Sbjct: 188 PVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYE 247
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M G++P++ ++N L CK+G + L +M G PD T ++ Y ++G
Sbjct: 248 EMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKG 307
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
RL A L + R GV Y L+ LC++ R A L R+ G P + YN
Sbjct: 308 RLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYN 367
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ CK + ++ L +M+ I P T L+ + G+ A++L+ E+
Sbjct: 368 TLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRF 427
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+ I LI C E A+ LL +K + E YN + F + +++
Sbjct: 428 GVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEA 487
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSL 600
+ L+ + PN T + +I L
Sbjct: 488 LLLKMEMVDKEIKPNLATYRAVIGCL 513
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++V+ Y + GR+ L + R G + +YL+ L + N +
Sbjct: 187 DPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G P+L +N L LCK ++M + P + TY LI +C
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR +A L M G++PD L+NG C E V +A L + D +Y
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
N + + + ++G + + L + G +P++ TC ++ G E KF
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGY--GKEGKF 414
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 91/233 (39%), Gaps = 19/233 (8%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P S ++V KF A+ ++ EL V + QD+ ++Y+
Sbjct: 394 ISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRF------GVSISQDI--------YSYL 439
Query: 182 KVGLIRESFKTFRKTL-----DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
V L RE+ K L G +P + N L+ + +CI + + EM I
Sbjct: 440 IVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEI 499
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+ + + + + ++ G PDL L YC++ ++ A
Sbjct: 500 KPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAES 559
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
L + + D ++ L+ +G + + ++ M+ GL P+ ++ N
Sbjct: 560 LLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCN 612
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/580 (58%), Positives = 461/580 (79%), Gaps = 10/580 (1%)
Query: 36 IQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI 95
I +SE K + NPLY+FLP+ QNP IV+L+ S LK + L LLQ+ +K L+PHLG +I
Sbjct: 42 IPESEAKLIVNPLYHFLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQI 101
Query: 96 SRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
S++LLRCQS+ VSAL FFNWVK DL+I+ +S NYCLI+HILAW+ +F AMK L EL+EL
Sbjct: 102 SKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIEL 161
Query: 156 VKDCPHSVDVFQDLISCTEDCNW----------AYVKVGLIRESFKTFRKTLDVGFQPSI 205
KD S DVFQ+L+ CTE CNW AYVK+ LI ES+ +F+K + +GF P++
Sbjct: 162 SKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNV 221
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++CN +LNGL K+ QCW++YEEMGRIG+ N +TFNILT+V C++GDV+K+NGFLEK
Sbjct: 222 IACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEK 281
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+EEEGFDPD+VTYNTLI SY ++GRL DAFYLY+IMYRR V+PDLV+YT+LM GLC+ G+
Sbjct: 282 MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 341
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
VREAHQLFHRM+ RG+ PD+V YNTLI AYCK+G +QE++SLL+EM+G GI+PD+FTC+I
Sbjct: 342 VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 401
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+V+GYG+EGRL+SALNLVVE+Q+ GV+++ DIY YLI++LC+++RPFAA SLLERI +D
Sbjct: 402 LVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS 461
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ P +IYN+L+ES C+ ++V++ALLLK EM++RN KP+ TY++LI C C I RS +
Sbjct: 462 FQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGE 521
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
LM EM+ES ++PD +ICR L+NGYC E + +KAE+LL FAK FQ +D+ES+N++ ++
Sbjct: 522 GLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVY 581
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ G+ +KLMELQ R L+ GF PN+LTC+Y+IH +WK M
Sbjct: 582 RDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMR 621
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/579 (58%), Positives = 461/579 (79%), Gaps = 10/579 (1%)
Query: 36 IQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI 95
I +SE K + NPLY+FLP+ QNP IV+L+ S LK + L LLQ+ +K L+PHLG +I
Sbjct: 46 IPESEAKLIVNPLYHFLPQNQNPFNIVELVSSHLKTNNPRLALLQSHIKELIPHLGHRQI 105
Query: 96 SRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
S++LLRCQS+ VSAL FFNWVK DL+I+ +S NYCLI+HILAW+ +F AMK L EL+EL
Sbjct: 106 SKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIEL 165
Query: 156 VKDCPHSVDVFQDLISCTEDCNW----------AYVKVGLIRESFKTFRKTLDVGFQPSI 205
KD S DVFQ+L+ CTE CNW AYVK+ LI ES+ +F+K + +GF P++
Sbjct: 166 SKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNV 225
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++CN +LNGL K+ QCW++YEEMGRIG+ N +TFNILT+V C++GDV+K+NGFLEK
Sbjct: 226 IACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEK 285
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+EEEGFDPD+VTYNTLI SY ++GRL DAFYLY+IMYRR V+PDLV+YT+LM GLC+ G+
Sbjct: 286 MEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGR 345
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
VREAHQLFHRM+ RG+ PD+V YNTLI AYCK+G +QE++SLL+EM+G GI+PD+FTC+I
Sbjct: 346 VREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRI 405
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+V+GYG+EGRL+SALNLVVE+Q+ GV+++ DIY YLI++LC+++RPFAA SLLERI +D
Sbjct: 406 LVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDS 465
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ P +IYN+L+ES C+ ++V++ALLLK EM++RN KP+ TY++LI C C I RS +
Sbjct: 466 FQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGE 525
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
LM EM+ES ++PD +ICR L+NGYC E + +KAE+LL FA+ FQ +D+ES+N++ ++
Sbjct: 526 GLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVY 585
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ G+ +KLMELQ R L+ GF PN+LTC+Y+IH +WK M
Sbjct: 586 RDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSM 624
>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Glycine max]
Length = 626
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/588 (58%), Positives = 450/588 (76%), Gaps = 17/588 (2%)
Query: 36 IQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQN---DLKPLLPHLGA 92
+ DS KS +P YN LP TQNPN IV+LI S LK S+L+LL + D+K +LPH+G
Sbjct: 27 LHDSHSKSTLSPFYNLLPPTQNPNNIVNLISSILKHKSSNLSLLHSSNNDIKGILPHMGP 86
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
HEISR+LLRCQSD S LTFFNWVKNDL I PT NYC+IVHILAW+ FS AM +L EL
Sbjct: 87 HEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNLLSEL 146
Query: 153 VELVKD----CPHSVDVFQDLISCTEDCNW----------AYVKVGLIRESFKTFRKTLD 198
++LV+ P + ++++L+ CTEDCNW AYVK G++ + TFR+ ++
Sbjct: 147 IQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFRRNIE 206
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
F P++++CN LL+GL + N I QCW VYEEMGR+GI N +TFNI+THV CK+GD DK
Sbjct: 207 ACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDGDTDK 266
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
V FL+K+EEEGF+PDLVTYNTL++SYCKK RL DAFYLY+IMY R V+P+L+T+T LMN
Sbjct: 267 VTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMN 326
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLC+EGKV+EAHQLFH+MVHRG+ PD+VSYNTL+ YC+EGKMQ +SLL+EM+GNGI P
Sbjct: 327 GLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICP 386
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D+ TC++IV+G+ ++G+LLSALN VVEL+RF + I D+YDYLIVALC + RPFAA S L
Sbjct: 387 DSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFL 446
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
RI QDGY+P + YN+L+ESLCK ++V +AL+LK EMV R++ +L YRA+I C C +
Sbjct: 447 LRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRV 506
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R+ EA L++EM+ SG+LPD +I R LINGYC E V+KA +LL FFA +FQ+YDTESY
Sbjct: 507 NRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYDTESY 566
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
NAV +F + G++++L+ELQ + L++G+ N LTCKY+IH L K ME+
Sbjct: 567 NAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHGLQKAMEQ 614
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/621 (56%), Positives = 458/621 (73%), Gaps = 20/621 (3%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQ-------IIQDSEHKSLSNPLYNFLPETQN 57
SP + F IS +S S + YS I+ DS+ +S+P YN LP T N
Sbjct: 10 SPAMKGFTFPRISNSIYSLSDSIFTKYSSFSSSSSSLILHDSDSNPISSPFYNLLPPTHN 69
Query: 58 PNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVK 117
PN IV+LI ++LK+ HL+ Q K +LPHLGAHEISRVL+R QSD+ SALTFFNWVK
Sbjct: 70 PNNIVNLISTALKQKSFHLSHFQTQFKTILPHLGAHEISRVLIRTQSDASSALTFFNWVK 129
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK-DCPHSVDVFQDLISCTEDC 176
NDL + NYCLIVHIL WN F AMK+LCEL++L + DV++ LI CTEDC
Sbjct: 130 NDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNVNVVSYDDVYKCLIDCTEDC 189
Query: 177 NW----------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
NW AYVK+G++ + +TF K ++ F P++V+CN LLNGL K+N I +CW+
Sbjct: 190 NWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCLLNGLSKINYIGECWE 249
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
VYEEMGR+GI N +TFNI+THV C+ GD DKVNGFLEK+EEEGF+PDLVTYN LI+ YC
Sbjct: 250 VYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYC 309
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
KK RL DAFYLY+IM R V+P+L++Y+ LMNGLCKEGK++EAHQLF++MV RG+ PD+V
Sbjct: 310 KKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVV 369
Query: 347 SYNTLIFAYCKE-GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
SYNTLI YCKE GKMQ +SLL+EM+G GI PD TC+I+ QGY +EG+LLSALN+V E
Sbjct: 370 SYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAE 429
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG-YVPSLEIYNELMESLCKCD 464
LQRFG+ I ++YDYL+VALC++ RPFAA S L RI QDG YVP + Y +L ESLC +
Sbjct: 430 LQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFN 489
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+V +AL+LK EM +++K +L+TY+A+I C C + R+ EA +L++EM+ G+LPD +I R
Sbjct: 490 NVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKR 549
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LINGYC E DV+KA +LL FFAK+FQ+YDTESYNA+ +F E G++++LMELQ + +++
Sbjct: 550 ALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKI 609
Query: 585 GFAPNNLTCKYMIHSLWKGME 605
G+ PN+LTCKY+I L KGME
Sbjct: 610 GYVPNSLTCKYVIRGLQKGME 630
>gi|297805650|ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 608
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/600 (56%), Positives = 442/600 (73%), Gaps = 21/600 (3%)
Query: 15 FISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDS 74
+SKL F FSS+S I K + NPLYN LP+TQNPNKIVD+ICS+L D
Sbjct: 4 LVSKLRF--FSSSSIVPRCNNIP----KPILNPLYNLLPQTQNPNKIVDVICSTLNHRDH 57
Query: 75 HLTL--LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLI 132
+ L L++++K L+PHLG EISRVLLR QSD+ ALTFF WVK DL +P NYCL+
Sbjct: 58 SVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRALTFFKWVKFDLGKRPNVGNYCLL 117
Query: 133 VHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW----------AYVK 182
+HILA + KF AM+ LCEL+EL DVF L+S +++CNW Y+K
Sbjct: 118 LHILASSKKFPLAMQFLCELIELTSK-KEEEDVFSVLVSASDECNWDPVVFDMLVKGYLK 176
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+GL+ + F TFRK +D GF+ S+V+CN LLNGLLKL+ ++ CWQVY M R+GI PNT+T
Sbjct: 177 LGLVEDGFSTFRKVIDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVYNVMCRVGIHPNTYT 236
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FNILT+VFC N + +V+ FLEK+EEEGF+PDLVTYNTL+SSYC++GRL +AFYLY+IMY
Sbjct: 237 FNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 296
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
RR V+PDLVTYT+L+ GLCK+G+VREAHQ FHRMV RG+ PD +SYNTLI+AYCKEG MQ
Sbjct: 297 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 356
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+SK LL+EM+GN + PD FTC++IV+G+ +EGRLL+A+N VVEL+R V I ++ D+LI
Sbjct: 357 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLAAVNFVVELRRLKVIIPIEVCDFLI 416
Query: 423 VALCQDNRPFAATSLLERIG-QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+LCQ+ +PFAA LLERI ++G+ E YN L+ESLC CD++ +AL+LK ++ ++N
Sbjct: 417 KSLCQEGKPFAAKHLLERISKEEGHEAKPETYNNLIESLCCCDAIEEALVLKGKLKNQNQ 476
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TYRALI C C IGR+ EA SLM EML+S + PDS IC L+N YC E D +KAE+
Sbjct: 477 VLDVKTYRALIGCLCRIGRNREAESLMAEMLDSEVKPDSIICGALVNRYCKELDFDKAES 536
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL FFA +F+I+DT SYN++ N E G K+++LQ+R RLGF PN+LTCKY+I L
Sbjct: 537 LLSFFAMEFRIFDTLSYNSLVNALCETGSGYDKVLDLQERMQRLGFVPNSLTCKYLIQVL 596
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ YL + L +D S ++ G+ S+ N L+ L K D + D + + M
Sbjct: 171 VKGYLKLGLVED-----GFSTFRKVIDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVYNVM 225
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I P+ T+ L FC GE +++M E G PD L++ YC +
Sbjct: 226 CRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 285
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A L ++ + D +Y ++ +DG + + + R + G P+ ++ +
Sbjct: 286 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 345
Query: 597 IHSLWK-GM 604
I++ K GM
Sbjct: 346 IYAYCKEGM 354
>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/601 (55%), Positives = 438/601 (72%), Gaps = 19/601 (3%)
Query: 14 NFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGD 73
N +S L F FSS SSS + + K + NPLYN LP++QNP+KIVD+ICS+L D
Sbjct: 3 NLVSNLRF--FSSYSSSIVPRC--SNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSD 58
Query: 74 SHLTL--LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCL 131
+ L L++++K L+PHLG EISRVLLR QSD+ A+TFF WVK DL +P NYCL
Sbjct: 59 YSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCL 118
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW----------AYV 181
++HIL + KF AM+ LCEL+EL VDVF+ L+S T++CNW Y+
Sbjct: 119 LLHILVSSKKFPLAMQFLCELIELTSK-KEEVDVFRVLVSATDECNWDPVVFDMLVKGYL 177
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+GL+ E F+ FR+ LD GF S+V+CN LLNGLLKL+ ++ CWQVY M R+GI PNT+
Sbjct: 178 KLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTY 237
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNILT+VFC + + +V+ FLEK+EEEGF+PDLVTYNTL+SSYC++GRL +AFYLY+IM
Sbjct: 238 TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIM 297
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
YRR V+PDLVTYT+L+ GLCK+G+VREAHQ FHRMV RG+ PD +SYNTLI+AYCKEG M
Sbjct: 298 YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q+SK LL+EM+GN + PD FTC++IV+G+ +EGRLLSA+N VVEL+R V I ++ D+L
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFL 417
Query: 422 IVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
IV+LCQ+ +PFAA LL+R I ++G+ E YN L+ESL +CD++ +AL+LK ++ ++N
Sbjct: 418 IVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQN 477
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
TYRALI C C IGR+ EA SLM EM +S + PDS IC L+ GYC E D +KAE
Sbjct: 478 QVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAE 537
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDG-DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL FA +F+I+D ESYN++ E G K +ELQ+R RLGF PN LTCKY+I
Sbjct: 538 RLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQV 597
Query: 600 L 600
L
Sbjct: 598 L 598
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 37/287 (12%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +RE+ +TF + +D G +P +S N L+ K + Q ++ EM + P+
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RI 300
T ++ F + G + F+ ++ D + LI S C++G+ A +L RI
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ TY L+ L + + EA L ++ ++ D +Y LI C+ G+
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE------GRLLS---------------- 398
+E++SL+ EM + + PD+F C +V GY KE RLLS
Sbjct: 498 NREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNS 557
Query: 399 --------------ALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
AL L +QR G +R YLI L Q + P
Sbjct: 558 LVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLP 604
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P+ T+ L FC E +++M E G PD L++ YC + +A
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L ++ + D +Y ++ +DG + + + R + G P+ ++ +I++
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 601 WK-GM 604
K GM
Sbjct: 352 CKEGM 356
>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
Length = 485
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 259/474 (54%), Positives = 367/474 (77%), Gaps = 14/474 (2%)
Query: 146 MKMLCELVELVKD---CPHSVD-VFQDLISCTEDCNW----------AYVKVGLIRESFK 191
M++L EL+++V+ C S + ++++L+ CTEDCNW AYVKVG++ ++ +
Sbjct: 1 MELLAELIQMVEVEGVCASSNEGIYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEKALE 60
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
TFR+ ++ P++++CN LL+GL + N I QCW+VY EMGR+G+ N +TFNI+THV
Sbjct: 61 TFRRNIETRLIPNVIACNCLLSGLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLS 120
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K+GD DKV GFLEK+EEEGF+PDLVTYNTL++SYCKK RL DAFYLY+IMY R V+P+L+
Sbjct: 121 KDGDTDKVTGFLEKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLI 180
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TYTTLMNGLC+EGKV+EAHQLFH+MVHRG++PDIVSYNTL+ YC+ G+MQ +S+LYEM
Sbjct: 181 TYTTLMNGLCEEGKVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEM 240
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+GN I PD+ TC++IV GY ++G+LLSALN V EL+RF + I ++YDYL+VALC++ +P
Sbjct: 241 IGNRICPDSITCRVIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKP 300
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
FAA S L RI +DGY P + YN+L+ESLC+ ++ +AL+LK +M ++++K + + YRA+
Sbjct: 301 FAARSFLHRISEDGYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAV 360
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C C + R+ EA L++E++ S MLPD +I R LI GYC E V+KA +LL FAK+FQ
Sbjct: 361 IICLCRVKRTVEAEVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQ 420
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YDTESYNAV +F + G++++LME++ + L++G+ PN LTC+++IH L K ME
Sbjct: 421 VYDTESYNAVVKVFCDVGNVTELMEVEDKLLKVGYVPNKLTCRHVIHGLQKAME 474
>gi|357130244|ref|XP_003566760.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Brachypodium distachyon]
Length = 579
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/575 (37%), Positives = 339/575 (58%), Gaps = 21/575 (3%)
Query: 45 SNPLYNFLPETQNPN-KIVDLICSSLKKG-DSHL---TLLQNDLKPLLPHLGAHEISRVL 99
S+ L + LP NP+ +VDL+ + L DS +L LLP+LG E++ V+
Sbjct: 10 SSTLASLLPRALNPHVTVVDLVTAHLTAAVDSDPEDEAAKPINLAGLLPYLGHEELTAVV 69
Query: 100 LRC-QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
LR S + L F + ++P+ + + H LA FS A+ L L+ L
Sbjct: 70 LRAGHSHPLPTLRFL--IALPPPLQPSPPHLAFLAHSLATTRFFSHALDALSHLLRLHP- 126
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFR---------KTLDVGFQPSIVSCN 209
S D L+ ++ + L++ + R + G P V+ N
Sbjct: 127 ---SHDALPTLLLSSQTAPHPSLPGLLVKALLRHARLRDAFRAAHRAAAAGAPPDTVAFN 183
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LL L + D+ W M R + PNTHTFNIL C+ D ++ GFLE++EE+
Sbjct: 184 ALLAALSRAGRFDELWAARAVMARAEVRPNTHTFNILVTALCRGEDAERAQGFLEELEEQ 243
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF+PD+VTYNTL+S YC++G+L DA +L+ +M R V PDLV++T LM+GLCK G++ +A
Sbjct: 244 GFEPDVVTYNTLLSGYCRRGKLQDALHLFGVMPPRGVEPDLVSHTVLMDGLCKAGRLNDA 303
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
++F RMVH G+SPD ++Y+ LI YC E +++E++ LL EM+G+G+ + F + +++
Sbjct: 304 RRMFDRMVHSGVSPDAIAYSVLIAGYCNEQRVREARLLLMEMVGSGLSSEGFALRAVIES 363
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ K G+LL+ LNLV L+++GV I + Y+ LI ALC+D RP AA L + + +DG+ PS
Sbjct: 364 HVKVGKLLTCLNLVSPLRKYGVVIPLESYNCLIGALCEDMRPHAARGLFKWMVEDGHSPS 423
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
LE+YN +++ LC+CDSV DAL +K EM R ++P TY+AL+ C C +G+S + S+M
Sbjct: 424 LEMYNMILDCLCQCDSVDDALDVKVEMSSREVRPDFHTYQALVTCLCRLGKSLDGKSVMA 483
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM+ESG+ P+ IC L+ G+C E +++AE +L F FQ++ ESYNA+ +
Sbjct: 484 EMIESGLQPNEAICTALVCGFCKEGYLDRAELILKAFVLDFQLHCNESYNALMRAYCMTR 543
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
S+ +ELQ R L LGF P++ TC+ +I+ L + +
Sbjct: 544 STSESLELQNRMLDLGFVPSSETCRSLIYGLSRSI 578
>gi|125570756|gb|EAZ12271.1| hypothetical protein OsJ_02159 [Oryza sativa Japonica Group]
Length = 596
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/571 (38%), Positives = 327/571 (57%), Gaps = 19/571 (3%)
Query: 48 LYNFLPETQNPN-KIVDLICSSLKKGDS--HLTLLQNDLKPLLPHLGAHEISRVLLRC-Q 103
L + LP NP +VDL+ L D+ ++++L LLP+LG+ E++ V+LR
Sbjct: 11 LTSLLPRALNPRVAVVDLVAGHLTASDAPDEARPIEDELSRLLPYLGSDELTAVVLRAGH 70
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
S + L F + + PT + + LA + FS A+ L L+ L
Sbjct: 71 SHPLPTLRFLLALPPPAQPSPT--HLAFLAGSLASSRLFSQALDALSHLLRLHP----GH 124
Query: 164 DVFQDLISCTEDCNW---------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
D L+ + A ++ +R++ + + G P + N LL
Sbjct: 125 DALPTLLRSSATAPHPSLPGLLVKALLRHARLRDALRAALRATAAGAPPDAAAFNALLAA 184
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L + D W M R G+ PN HTFNIL C+ D ++ GFLE++EE+GF+PD
Sbjct: 185 LSRAGRFDDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPD 244
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
VTYNTL+S YC++GRL DA +L+ +M R V PDLV++T +M+ LCK G+VR+A ++F
Sbjct: 245 GVTYNTLLSGYCRRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFD 304
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
RM+ GLSPD V+Y+ LI YC EG+++E++ LL EM+G G + F +++V+ + K
Sbjct: 305 RMIQSGLSPDAVAYSVLIAGYCNEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFS 364
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+LL+ LN+V +++ GV I Y LI ALC+D RP AA LL + +DG+ PSL IYN
Sbjct: 365 KLLTCLNMVAPIRKHGVVIPSQSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYN 424
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
++E C+CD V +AL +K EM+ R ++ +TYRALI CFC +GRS + S+M EM+ES
Sbjct: 425 MIIECFCQCDIVEEALDVKVEMISREVRLDFNTYRALITCFCRLGRSLDGESIMAEMIES 484
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G P+ IC L+ G+C E +N+AE +L F F ++ ESYNA+ + E +
Sbjct: 485 GFQPNEAICSALVCGFCKEGALNRAELILRAFVLDFHVHCNESYNALMRAYCETTSSKES 544
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ELQ R L LGF PN+ TC+ +I L K ++
Sbjct: 545 LELQNRMLELGFVPNSETCRSLILGLSKSID 575
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 35/256 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G +RE+ + + GF + ++ +K + + C + + + G+
Sbjct: 324 GYCNEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMVAPIRKHGVVI 383
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +++ L C++ + G L + E+G P L YN +I +C+ + +A +
Sbjct: 384 PSQSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVK 443
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV------------ 346
M R V D TY L+ C+ G+ + + M+ G P+
Sbjct: 444 VEMISREVRLDFNTYRALITCFCRLGRSLDGESIMAEMIESGFQPNEAICSALVCGFCKE 503
Query: 347 -----------------------SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
SYN L+ AYC+ +ES L M+ G P++ TC
Sbjct: 504 GALNRAELILRAFVLDFHVHCNESYNALMRAYCETTSSKESLELQNRMLELGFVPNSETC 563
Query: 384 QIIVQGYGKEGRLLSA 399
+ ++ G K L+S+
Sbjct: 564 RSLILGLSKSIDLVSS 579
>gi|125526348|gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indica Group]
Length = 596
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/571 (38%), Positives = 326/571 (57%), Gaps = 19/571 (3%)
Query: 48 LYNFLPETQNPN-KIVDLICSSLKKGDS--HLTLLQNDLKPLLPHLGAHEISRVLLRC-Q 103
L + LP NP +VDL+ L D+ ++++L LLP+LG+ E++ V+LR
Sbjct: 11 LTSLLPRALNPRVAVVDLVAGHLTASDAPDEARPIEDELSRLLPYLGSDELTAVVLRAGH 70
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
S + L F + + PT + + LA + FS A+ L L+ L
Sbjct: 71 SHPLPTLRFLLALPPPAQPSPT--HLAFLAGSLASSRLFSQALDALSHLLRLHP----GH 124
Query: 164 DVFQDLISCTEDCNW---------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
D L+ + A ++ +R++ + + G P + N LL
Sbjct: 125 DALPTLLRSSATAPHPSLPGLLVKALLRHARLRDALRAALRATAAGAPPDAAAFNALLAA 184
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L + D W M R G+ PN HTFNIL C+ D ++ GFLE++EE+GF+PD
Sbjct: 185 LSRAGRFDDLWAARAVMARAGVRPNAHTFNILVAALCRGEDAERAQGFLEELEEQGFEPD 244
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
VTYNTL+S YC++GRL DA +L+ +M R V PDLV++T +M+ LCK G+VR+A ++F
Sbjct: 245 GVTYNTLLSGYCRRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFD 304
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
RM+ GLSPD V+Y+ LI YC EG+++E++ LL EM+G G + F +++V+ + K
Sbjct: 305 RMIQSGLSPDAVAYSVLIAGYCNEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFS 364
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+LL+ LN+V +++ GV I Y LI ALC+D RP AA LL + +DG+ PSL IYN
Sbjct: 365 KLLTCLNMVAPIRKHGVVIPSQSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYN 424
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
++E C+CD V +AL +K EM+ R ++ +TYRALI CFC +GRS + +M EM+ES
Sbjct: 425 MIIECFCQCDIVEEALDVKVEMISREVRLDFNTYRALITCFCRLGRSLDGELIMAEMIES 484
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G P+ IC L+ G+C E +N+AE +L F F ++ ESYNA+ + E +
Sbjct: 485 GFQPNEAICSALVCGFCKEGALNRAELILRAFVLDFHVHCNESYNALMRAYCETTSSKES 544
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ELQ R L LGF PN+ TC+ +I L K ++
Sbjct: 545 LELQNRMLELGFVPNSETCRSLILGLSKSID 575
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 35/256 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G +RE+ + + GF + ++ +K + + C + + + G+
Sbjct: 324 GYCNEGRLREARFLLMEMVGCGFSSEGFALKVVVESHVKFSKLLTCLNMVAPIRKHGVVI 383
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +++ L C++ + G L + E+G P L YN +I +C+ + +A +
Sbjct: 384 PSQSYSCLIGALCEDMRPNAARGLLHWMIEDGHSPSLAIYNMIIECFCQCDIVEEALDVK 443
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV------------ 346
M R V D TY L+ C+ G+ + + M+ G P+
Sbjct: 444 VEMISREVRLDFNTYRALITCFCRLGRSLDGELIMAEMIESGFQPNEAICSALVCGFCKE 503
Query: 347 -----------------------SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
SYN L+ AYC+ +ES L M+ G P++ TC
Sbjct: 504 GALNRAELILRAFVLDFHVHCNESYNALMRAYCETTSSKESLELQNRMLELGFVPNSETC 563
Query: 384 QIIVQGYGKEGRLLSA 399
+ ++ G K L+S+
Sbjct: 564 RSLILGLSKSIDLVSS 579
>gi|413948245|gb|AFW80894.1| hypothetical protein ZEAMMB73_865420 [Zea mays]
Length = 573
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/573 (38%), Positives = 336/573 (58%), Gaps = 27/573 (4%)
Query: 45 SNPLYNFLPETQNPN-KIVDLICSSLKKGDSHLTLLQNDLKP-----LLPHLGAHEISRV 98
S+ L + LP + NP+ +VDLI HLT + +D KP LLP+LG E++ V
Sbjct: 10 SSTLTSLLPRSLNPHVAVVDLIAI-------HLTAVTDDAKPVNFTYLLPYLGHDELTAV 62
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+LR S T + ++P+ + + H LA + FS A+ L L+ L
Sbjct: 63 VLRA-GHSQPLRTLRFLLALPPPLQPSPPHLAFLAHSLASSRLFSHALDALSHLIRLHP- 120
Query: 159 CPHSVDVFQDLISCTEDCNW---------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
D+ L+ + A ++ +R++F++ + G P + N
Sbjct: 121 ---RHDLLPTLLLASATAPHPSLPGLLVKALLRHARLRDAFRSALRATAAGAPPDAAAFN 177
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LL L + N D+ W M R G+ P+ TFNIL C+ D ++ GFLE++EE+
Sbjct: 178 ALLAALSRANRFDELWAARGAMARAGVRPDARTFNILVAALCRGEDAERAYGFLEELEEQ 237
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF+PD+VTYNTL++ YC+KGRL DA +L+ +M R V PDLV++T LM+GLCK ++++A
Sbjct: 238 GFEPDVVTYNTLLAGYCRKGRLQDALHLFDVMPHRRVPPDLVSHTILMDGLCKAWRLKDA 297
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
++F RMVH GL PD V+Y+ LI YC EG+++E++SLL EM G+G+ F +++VQG
Sbjct: 298 RRMFDRMVHGGLRPDAVAYSVLITGYCNEGQLKEARSLLMEMAGSGLLDIAFALRVVVQG 357
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ K G+LL+ LN+V L+++G+ I Y LI ALC+D RP AA LL+ + +DG+ PS
Sbjct: 358 HVKFGKLLTCLNMVAPLRKYGIVIPSQSYSCLIGALCEDMRPNAARGLLQWMIEDGHCPS 417
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
L++YN +++ C+CD+ +AL +K EM R +KP+ +TY+ LI C C +G+S S+M
Sbjct: 418 LQMYNMIVDCFCRCDNPKEALDVKVEMTSREVKPNYNTYQTLIICLCRLGKSLSGQSVMV 477
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM+ES P+ IC L+ G+C E D+++ E ++ FA FQI ESY A+ + E
Sbjct: 478 EMIESDFHPNEAICTALVCGFCKEGDLDRGELIVKLFALDFQIRCNESYTALMRTYCETR 537
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + LQ R L LGF PN+ TC+ +I+ L +
Sbjct: 538 STADSLALQDRMLELGFVPNSETCRSIIYGLSR 570
>gi|242053243|ref|XP_002455767.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
gi|241927742|gb|EES00887.1| hypothetical protein SORBIDRAFT_03g024580 [Sorghum bicolor]
Length = 558
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 323/573 (56%), Gaps = 42/573 (7%)
Query: 45 SNPLYNFLPETQNPN-KIVDLICSSLKKGDSHLTLLQNDLKP-----LLPHLGAHEISRV 98
S+ L + LP NP+ +VDL+ + HLT + +D +P LLP+LG E++ V
Sbjct: 10 SSTLTSLLPRALNPHVAVVDLVAT-------HLTAVTDDAEPVDLTRLLPYLGHDELTAV 62
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+LR S T + ++P+ + + H LA + FS A+ L L+ L
Sbjct: 63 VLRA-GHSHPLPTLRFLLALPPPLQPSPPHLAFLAHSLASSRLFSHALGALSHLIRLHP- 120
Query: 159 CPHSVDVFQDLISCTEDCNW---------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
D L+ + A ++ +R++F++ + G P + N
Sbjct: 121 ---RHDALPTLLVASATAPHPSLPGLLVKALLRHARLRDAFRSALRAAAAGAPPDAAAFN 177
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LL L + D+ W M R G+ P+ TFNIL C+ D ++ GFLE++EE+
Sbjct: 178 SLLAALSRAGRFDELWAARGAMVRAGVRPDARTFNILVAALCRGEDAERAQGFLEELEEQ 237
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF+PD+VTYNTL++ YC+KGRL DA +L+ +M R V PDLV++T LM+GLCK ++ EA
Sbjct: 238 GFEPDVVTYNTLLAGYCRKGRLQDALHLFGVMPYRRVPPDLVSHTILMDGLCKAWRLNEA 297
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
++F RMV YC EG+++E++SLL EM G+G+ F +++++G
Sbjct: 298 RRMFDRMVQ---------------GYCNEGQLKEARSLLMEMAGSGLLDIAFALRVVIEG 342
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ K G+LL+ LN+V L+++G+ I Y LI ALC+D RP AA LL+ + +DG+ PS
Sbjct: 343 HVKFGKLLTCLNMVAPLRKYGIIIPSQSYSCLISALCEDMRPNAARGLLQWMIEDGHSPS 402
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
L++YN +++ C+CD+ +AL +K EM R +KP+ TY+ALI C C +G+S S+M
Sbjct: 403 LQVYNMIVDCFCRCDNPKEALDVKVEMTTREVKPNYDTYQALITCLCRLGKSLAGQSIMV 462
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM+ES P+ IC L+ G+C E D+++ E ++ FA FQI ES+NA+ + E
Sbjct: 463 EMIESDFHPNEAICAALVCGFCKEGDLDRGELIVKSFALDFQIRCNESFNALMRTYCETR 522
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + LQ R L LGF PN TC+ +I+ L +
Sbjct: 523 STAESLALQDRMLELGFVPNRETCRSIIYGLSR 555
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 272/546 (49%), Gaps = 22/546 (4%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKP---TSSNYCLIVHILAWN 139
L L PH S VLL QSD + L F W + + T CL +HIL
Sbjct: 30 LASLSPHFTPQAASYVLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALHILVRF 89
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV-------------KVGLI 186
+ A + +L + D P +F+ L C+ + ++G +
Sbjct: 90 KLYRTAHSLAADLAATLPD-PTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFV 148
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-----IDQCWQVYEEMGRIGICPNTH 241
++ GF P+++S N +L+ LL+ + D +V+ +M R G+ PN +
Sbjct: 149 PKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVY 208
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N++ GD++K GF+ K+E+EG P++VTYNTLI + CKK ++ +A L R M
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAM 268
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V +L++Y +++NGLC +G++ E +L M +GL PD V+YNTL+ +CKEG +
Sbjct: 269 AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNL 328
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL EM+G G+ P+ T ++ K G L A+ + +++ G+ + Y L
Sbjct: 329 HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTL 388
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I CQ A +L + G+ PS+ YN L+ C V +A+ + MV+R +
Sbjct: 389 IDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGL 448
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + +Y +I FC G+A + +EM+E G+LPD+ LI G C+++ + +A
Sbjct: 449 PPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L ++ D +Y ++ N + DG+LSK + L ++ GF P+N+T +I+ L
Sbjct: 509 LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLN 568
Query: 602 KGMERK 607
K K
Sbjct: 569 KKARTK 574
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 222/470 (47%), Gaps = 23/470 (4%)
Query: 157 KDCPHSVDVFQDLISCTEDCN-WAY-------VKVGLIRESFKTFRKTLDVGFQPSIVSC 208
+D + VF+D++ N + Y V G + + RK G P++V+
Sbjct: 186 RDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTY 245
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L++ K + + + M G+ N ++N + + C G + +V +E++
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G PD VTYNTL++ +CK+G L+ L M + + P++VTYTTL+N +CK G +
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A ++F +M RGL P+ +Y TLI +C++G M E+ +L EM+ +G P T +V
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVH 425
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY GR+ A+ ++ + G+ Y +I C++ A + E + + G +P
Sbjct: 426 GYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLP 485
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
Y+ L++ LC + +A L EM+ R + P TY +LI +C G +A+ L
Sbjct: 486 DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLH 545
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN--------- 559
DEM++ G LPD+ VLING + A+ LL + + D +YN
Sbjct: 546 DEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNN 605
Query: 560 ------AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ F G +++ + K L+ PN MIH +G
Sbjct: 606 EFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRG 655
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 190/405 (46%), Gaps = 20/405 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + + + G P++V+ L+N + K + + +++++M G+ P
Sbjct: 321 GFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRP 380
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L FC+ G +++ L ++ GF P +VTYN L+ YC GR+ +A +
Sbjct: 381 NERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGIL 440
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M R + PD+V+Y+T++ G C+E ++ +A Q+ MV +G+ PD V+Y++LI C +
Sbjct: 441 RGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQ 500
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ E+ L EMM G+ PD T ++ Y +G L AL L E+ + G Y
Sbjct: 501 QKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTY 560
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI L + R A LL ++ + VP YN L+E+ C +
Sbjct: 561 SVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNN-------------- 605
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ L+ FC G EA + ML+ P++ I ++I+G+ +V+K
Sbjct: 606 -----EFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHK 660
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
A L T + A+ A +G +L L + LR
Sbjct: 661 AYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILR 705
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 204/450 (45%), Gaps = 61/450 (13%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +V+ + +L E+V K +V + LI+C K
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVG--KGLSPNVVTYTTLINCM-------CKA 360
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + F + G +P+ + L++G + +++ ++V EM G P+ T+
Sbjct: 361 GNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTY 420
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H +C G V + G L + E G PD+V+Y+T+I+ +C++ L AF + M
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ VLPD VTY++L+ GLC + K+ EA LF M+ RGL PD V+Y +LI AYC +G++ +
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSK 540
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ G PD T +++ G K+ R A L+++L + S+ D+ ++
Sbjct: 541 ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL-FYEESVPDDVTYNTLI 599
Query: 424 ALCQDN---------RPF-------AATSLLERIGQDGYVPSLEIYN------------- 454
C +N + F A + + + Q + P+ IYN
Sbjct: 600 ENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVH 659
Query: 455 -------ELMESLCKCDSVADALLLK--------DEMVD--RNIKPS-----LSTYRALI 492
EL S C +VA L+K DE+ +NI S + L+
Sbjct: 660 KAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLV 719
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
G ++++ EM + G+LPD I
Sbjct: 720 EVNFKEGNMDAVLNVLTEMAKDGLLPDGGI 749
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 245/493 (49%), Gaps = 47/493 (9%)
Query: 163 VDVFQDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
V++ + LIS + C +YV+ + E TF+ GF SI +CN LL
Sbjct: 98 VEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLL 157
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
GL+K+ +D W+VY E+ R GI N +T NI+ + CK+ +D V FL +E++G
Sbjct: 158 GGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIF 217
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
D+VTYNTLI++YC++G L +AF + M + + P L TY ++NGLCK+G+ A +
Sbjct: 218 ADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGV 277
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F+ M+ GLSPD +YNTL+ C+ E+K + +M+ G+ PD + ++ +
Sbjct: 278 FNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSR 337
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G L AL +++ G+ IY LI C++ A + +++ + G +
Sbjct: 338 NGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN ++ LCK +ADA L DEMV+R + P T+ LI C G G+A+SL M
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMT 457
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEAL-------------------------LGFFA 547
+ + PD +LI+G+C ++ KA L LGF +
Sbjct: 458 QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVS 517
Query: 548 KKFQIYDTE----------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ F+++D + N V + GDLSK E + + G P+++T +I
Sbjct: 518 EAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLI 577
Query: 598 HSLWKG--MERKF 608
+ KG M++ F
Sbjct: 578 NGFVKGEYMDKAF 590
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 219/441 (49%), Gaps = 13/441 (2%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+F D+++ N AY + GL+ E+F+ G +P++ + N ++NGL K +
Sbjct: 216 IFADIVTYNTLIN-AYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRA 274
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
V+ EM IG+ P+T T+N L C+N + + + G PDL+++++LI
Sbjct: 275 KGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+ G L+ A +R M ++PD V YT L+NG C+ G + EA ++ +M+ +G + D
Sbjct: 335 SSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YNT++ CK+ + ++ +L EM+ G+ PD T ++ G+ KEG + AL+L
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL-- 452
Query: 405 ELQRFGVSISRDI------YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
FG+ ++I Y+ LI C+ A L + P+ Y L+
Sbjct: 453 ----FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C V++A L DEM+ + IKP+L T +I +C G +A + +M+ G+ P
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGP 568
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
DS LING+ + ++KA L+ K D +YN + N F G + + +
Sbjct: 569 DSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 579 KRFLRLGFAPNNLTCKYMIHS 599
++ + G P+ T +I+
Sbjct: 629 RKMIERGIDPDRSTYTTLING 649
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 207/418 (49%), Gaps = 9/418 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KPT Y +++ L ++ A + E++ + P + L+ + N+
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS-IGLSPDTTTYNTLLVESCRNNNFL-- 307
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
E+ F L G P ++S + L+ + +DQ + +M G+ P+
Sbjct: 308 ------EAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV 361
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ IL + +C+NG + + +K+ E+G D+V YNT+++ CKK L DA L+ M
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V+PD T+TTL++G CKEG + +A LF M + + PDIV+YN LI +CK +M
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEM 481
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L EM+ I+P+ + I+V GY G + A L E+ R G+ + + +
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTV 541
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ A L ++ +G P YN L+ K + + A L ++M + +
Sbjct: 542 IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGL 601
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P + TY ++ FC GR EA ++ +M+E G+ PD LINGY + ++ +A
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEA 659
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 167/336 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ FR G P V L+NG + + + ++ ++M G + +
Sbjct: 339 GHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAY 398
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CK + N +++ E G PD T+ TLI +CK+G + A L+ IM +
Sbjct: 399 NTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ 458
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+N+ PD+VTY L++G CK ++ +A++L++ M+ R + P+ +SY L+ YC G + E
Sbjct: 459 KNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSE 518
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ GI P TC +++GY + G L A + ++ GV Y+ LI
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ A L+ ++ G P + YN ++ C+ + +A L+ +M++R I P
Sbjct: 579 GFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDP 638
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
STY LI + EA DEML+ G +PD
Sbjct: 639 DRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 250/516 (48%), Gaps = 21/516 (4%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDL-EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE- 154
+VL RC+ D L F V K +S + +VH L + S A + +V
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRK 164
Query: 155 -----------LVKDCPH--SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
L+ C + SV + DL+ T YV+ +RE + F+ G
Sbjct: 165 SGVSRVKVVESLISTCFYFGSVGLIYDLLVRT------YVQAKKLREGSEAFQILRRKGV 218
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
SI +CN LL GL++ +D W++Y E+ R GI N +T NI+ + CK+ + V
Sbjct: 219 SVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMF 278
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
FL +E +G D+VTYNTLI++YC++G + +AF L R + P L+TY ++ GLC
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K GK A + M+ GL+P+ +YNTL+ C+ + E++ + EM G+ PD
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ ++ + G L AL E++R G+ IY LI C++ A + + +
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G + YN + LCK ADA +L +EMV+R + P T+ LI +C G
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A++L + M+ + + PD LI+G+C ++ +A+ L +K I D SY V
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
N F G L + + L + L G PN +TC +I
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 249/496 (50%), Gaps = 13/496 (2%)
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
V+ +E+ + N ++V+ L + KF M L ++ VF D+++
Sbjct: 249 VRGGIELNVYTLN--IMVNALCKDRKFENVMFFLSDM--------EGKGVFADIVTYNTL 298
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
N AY + GL+ E+F+ G +P +++ N +L GL K+ D+ V EM ++G
Sbjct: 299 IN-AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ PN T+N L C+ ++ + +++ G PDLV++++LI + G L A
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+R M R ++PD V YT L++G C+ G + +A ++ M+ RG D+V+YNT +
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK+ ++ L EM+ G+ PD +T +++GY K+G + ALNL + R + +
Sbjct: 478 CKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI C+ A L + + + +P Y ++ C + +AL L D+
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQ 597
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+++ I+P+L T LI +C G +A + +M+ +G++PDS LI+GY E +
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ KA L+ K+ ++ +YN + N F +G + + ++ ++ + +G P+ T
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 596 MI--HSLWKGMERKFQ 609
+I H M+ F+
Sbjct: 718 LINGHVSQDNMKEAFR 733
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 163/305 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + ++ K + L G +V+ N LNGL K ++ EM G+ P
Sbjct: 441 GFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP 500
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TF L +CK+G++DK E + PD VTYNTLI +CK G + A L+
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R++++PD ++Y T++NG C G + EA L +M+ +G+ P++V+ NTLI YC+
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M ++ L +M+ NGI PD+F+ ++ GY KE L A L+ E+++ G+ + Y
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ C + + A +L ++ + G P Y+ L+ D++ +A DEM+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 479 RNIKP 483
R + P
Sbjct: 741 RGLVP 745
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 170/363 (46%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+++L + + + + + + + +G + N L+ + G ++ A+ +Y +
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + ++ T ++N LCK+ K M +G+ DIV+YNTLI AYC+EG ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL G+ P T I+ G K G+ A ++++E+ + G++ + Y+ L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
V +C+ + A + + + + G +P L ++ L+ L + + AL+ EM I
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P Y LI FC G +A+ + DEML G D +NG C +K A+ L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + D ++ + + +DG++ K + L + +R P+ +T +I K
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 603 GME 605
E
Sbjct: 550 AGE 552
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +S +LNG + + + ++M GI PN T N L +C++GD+ K +
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ G PD +YNTLI Y K+ L AF L M +R + +++TY ++NG C
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
EGK++EA Q+ +M+ G++PD +Y++LI + + M+E+ EM+ G+ PD
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
D+ D IS N + GL+ E+ + L+ G +P++V+CN L+ G + + +
Sbjct: 567 DIIPDHISYGTVLN-GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPK 625
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ +M GI P++ ++N L + K +++K + ++E+ G +++TYN +++
Sbjct: 626 AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILN 685
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+C +G++ +A + R M + PD TY++L+NG + ++EA + M+ RGL P
Sbjct: 686 GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Query: 344 D 344
D
Sbjct: 746 D 746
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 250/516 (48%), Gaps = 21/516 (4%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDL-EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE- 154
+VL RC+ D L F V K +S + +VH L + S A + +V
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRK 164
Query: 155 -----------LVKDCPH--SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
L+ C + SV + DL+ T YV+ +RE + F+ G
Sbjct: 165 SGVSRVKVVESLISTCFYFGSVGLIYDLLVRT------YVQAKKLREGSEAFQILRRKGV 218
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
SI +CN LL GL++ +D W++Y E+ R GI N +T NI+ + CK+ + V
Sbjct: 219 SVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMF 278
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
FL +E +G D+VTYNTLI++YC++G + +AF L R + P L+TY ++ GLC
Sbjct: 279 FLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLC 338
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K GK A + M+ GL+P+ +YNTL+ C+ + E++ + EM G+ PD
Sbjct: 339 KIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLV 398
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ ++ + G L AL E++R G+ IY LI C++ A + + +
Sbjct: 399 SFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G + YN + LCK ADA +L +EMV+R + P T+ LI +C G
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A++L + M+ + + PD LI+G+C ++ +A+ L +K I D SY V
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
N F G L + + L + L G PN +TC +I
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLI 614
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 249/496 (50%), Gaps = 13/496 (2%)
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
V+ +E+ + N ++V+ L + KF M L ++ VF D+++
Sbjct: 249 VRGGIELNVYTLN--IMVNALCKDRKFENVMFFLSDM--------EGKGVFADIVTYNTL 298
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
N AY + GL+ E+F+ G +P +++ N +L GL K+ D+ V EM ++G
Sbjct: 299 IN-AYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ PN T+N L C+ ++ + +++ G PDLV++++LI + G L A
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+R M R ++PD V YT L++G C+ G + +A ++ M+ RG D+V+YNT +
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK+ ++ L EM+ G+ PD +T +++GY K+G + ALNL + R + +
Sbjct: 478 CKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI C+ A L + + + +P Y ++ C + +AL L D+
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQ 597
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+++ I+P+L T LI +C G +A + +M+ +G++PDS LI+GY E +
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ KA L+ K+ ++ +YN + N F +G + + ++ ++ + +G P+ T
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSS 717
Query: 596 MI--HSLWKGMERKFQ 609
+I H M+ F+
Sbjct: 718 LINGHVSQDNMKEAFR 733
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 163/305 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + ++ K + L G +V+ N LNGL K ++ EM G+ P
Sbjct: 441 GFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVP 500
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TF L +CK+G++DK E + PD VTYNTLI +CK G + A L+
Sbjct: 501 DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R++++PD ++Y T++NG C G + EA L +M+ +G+ P++V+ NTLI YC+
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRS 620
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M ++ L +M+ NGI PD+F+ ++ GY KE L A L+ E+++ G+ + Y
Sbjct: 621 GDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITY 680
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ C + + A +L ++ + G P Y+ L+ D++ +A DEM+
Sbjct: 681 NLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ 740
Query: 479 RNIKP 483
R + P
Sbjct: 741 RGLVP 745
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 170/363 (46%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+++L + + + + + + + +G + N L+ + G ++ A+ +Y +
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + ++ T ++N LCK+ K M +G+ DIV+YNTLI AYC+EG ++
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL G+ P T I+ G K G+ A ++++E+ + G++ + Y+ L+
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
V +C+ + A + + + + G +P L ++ L+ L + + AL+ EM I
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P Y LI FC G +A+ + DEML G D +NG C +K A+ L
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + D ++ + + +DG++ K + L + +R P+ +T +I K
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCK 549
Query: 603 GME 605
E
Sbjct: 550 AGE 552
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +S +LNG + + + ++M GI PN T N L +C++GD+ K +
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ G PD +YNTLI Y K+ L AF L M +R + +++TY ++NG C
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
EGK++EA Q+ +M+ G++PD +Y++LI + + M+E+ EM+ G+ PD
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
D+ D IS N + GL+ E+ + L+ G +P++V+CN L+ G + + +
Sbjct: 567 DIIPDHISYGTVLN-GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPK 625
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ +M GI P++ ++N L + K +++K + ++E+ G +++TYN +++
Sbjct: 626 AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILN 685
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+C +G++ +A + R M + PD TY++L+NG + ++EA + M+ RGL P
Sbjct: 686 GFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Query: 344 D 344
D
Sbjct: 746 D 746
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 244 bits (623), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 167/598 (27%), Positives = 287/598 (47%), Gaps = 24/598 (4%)
Query: 17 SKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHL 76
+K SS + +SSY + +Q E + NP ++PN+ L S L + L
Sbjct: 25 TKTLLSSAPNPNSSYGIPALQTLETSTTLNP-----SSVEDPNQSTSLSDSFLTE-KVLL 78
Query: 77 TLLQ---NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL-EIKPTSSNYCLI 132
L Q N L+ LL L + + VL +C+ + F + + ++ K + ++ +
Sbjct: 79 NLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAM 138
Query: 133 VHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN----------WAYVK 182
+HIL + + A ++ +V K V++ + L+ +C YV+
Sbjct: 139 IHILVRSRRLPDAQAVILRMVR--KSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQ 196
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+RE + FR G SI +CN LL GL+K+ +D W++Y+E+ R G+ N +T
Sbjct: 197 ARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 256
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
NI+ + CKN ++ FL +EE+G PD+VTYNTLI++YC++G L +AF L M
Sbjct: 257 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 316
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P + TY ++NGLCK GK A + M+ G+SPD +YN L+ C+ M
Sbjct: 317 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 376
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++ + EM G+ PD + ++ K G L AL +++ G++ IY LI
Sbjct: 377 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 436
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ A + + + + G V + YN ++ LCK +++A L EM +R +
Sbjct: 437 GGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 496
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P T+ LI + G +AV+L + M++ + PD LI+G+C ++ K L
Sbjct: 497 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 556
Query: 543 LGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ +IY SY + N + G +S+ L + GF +TC ++
Sbjct: 557 WNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKG 613
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 216/435 (49%), Gaps = 1/435 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF D+++ N AY + GL+ E+F+ G +P + + N ++NGL K +
Sbjct: 285 VFPDVVTYNTLIN-AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 343
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
V +EM +IG+ P+T T+NIL C+N ++ +++ +G PDLV+++ LI
Sbjct: 344 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 403
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
K G L+ A +R M + PD V YT L+ G C+ G + EA ++ M+ +G D
Sbjct: 404 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 463
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YNT++ CKE + E+ L EM G++PD +T ++ GY K+G + A+ L
Sbjct: 464 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 523
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ + + Y+ LI C+ + L + P+ Y L+ C
Sbjct: 524 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 583
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V++A L DEMV++ + ++ T ++ +C G + +A + ML G++PD
Sbjct: 584 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 643
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LING+ E+++++A AL+ + D +YN + N F+ G + + + + +
Sbjct: 644 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 703
Query: 585 GFAPNNLTCKYMIHS 599
G P+ T +I+
Sbjct: 704 GVNPDRSTYTSLING 718
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 209/418 (50%), Gaps = 9/418 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y I++ L K+ A +L E+++ + P + L+ C + N
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPDTATYNILLVECCRNDN---- 374
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ ++ + F + G P +VS + L+ L K C+DQ + + +M G+ P+
Sbjct: 375 ----MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 430
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ IL FC+NG + + +++ E+G D+VTYNT+++ CK+ L++A L+ M
Sbjct: 431 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 490
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V PD T+TTL+NG K+G + +A LF M+ R L PD+V+YNTLI +CK +M
Sbjct: 491 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 550
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L +M+ IYP+ + I++ GY G + A L E+ G + + +
Sbjct: 551 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 610
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C+ A L + G VP YN L+ K +++ A L ++M + +
Sbjct: 611 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 670
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + TY ++ F GR EA +M +M+E G+ PD LING+ + ++ +A
Sbjct: 671 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 728
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 199/416 (47%), Gaps = 1/416 (0%)
Query: 188 ESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ K+F ++ G P +V+ N L+N + +++ +++ + M G+ P T+N +
Sbjct: 271 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 330
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+ CK G + G L+++ + G PD TYN L+ C+ + DA ++ M + V
Sbjct: 331 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 390
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+PDLV+++ L+ L K G + +A + F M + GL+PD V Y LI +C+ G M E+
Sbjct: 391 VPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 450
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ EM+ G D T I+ G KE L A L E+ GV + LI
Sbjct: 451 VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS 510
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+D A +L E + Q P + YN L++ CK + L ++M+ R I P+
Sbjct: 511 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 570
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+Y LI +C +G EA L DEM+E G C ++ GYC + KA+ L
Sbjct: 571 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 630
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + D +YN + N F ++ ++ + L + G P+ +T +++ +
Sbjct: 631 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G++ E+ K + L+ G +V+ N +LNGL K + + +++ EM G+ P
Sbjct: 438 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 497
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TF L + + K+G+++K E + + PD+VTYNTLI +CK + L+
Sbjct: 498 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 557
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ ++Y L+NG C G V EA +L+ MV +G I++ NT++ YC+
Sbjct: 558 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 617
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ L M+ GI PD T ++ G+ KE +
Sbjct: 618 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM---------------------- 655
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+R FA L+ ++ G +P + YN ++ + + +A L+ +M++
Sbjct: 656 ----------DRAFA---LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 702
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
R + P STY +LI EA + DEML+ G +PD +
Sbjct: 703 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 168/327 (51%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N+L+ K G ++ A+ +Y+ + R V ++ T ++N LCK K+ M
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+G+ PD+V+YNTLI AYC++G ++E+ L+ M G G+ P FT I+ G K G+ L
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A ++ E+ + G+S Y+ L+V C+++ A + + + G VP L ++ L+
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 402
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
L K + AL +M + + P Y LI FC G EA+ + DEMLE G +
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D ++NG C EK +++A+ L ++ D ++ + N +++DG+++K + L
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ ++ P+ +T +I KG E
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSE 549
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 166/596 (27%), Positives = 286/596 (47%), Gaps = 24/596 (4%)
Query: 17 SKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHL 76
+K SS + +SSY + +Q E + NP ++PN+ L S L + L
Sbjct: 129 TKTLLSSAPNPNSSYGIPALQTLETSTTLNP-----SSVEDPNQSTSLSDSFLTE-KVLL 182
Query: 77 TLLQ---NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL-EIKPTSSNYCLI 132
L Q N L+ LL L + + VL +C+ + F + + ++ K + ++ +
Sbjct: 183 NLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAM 242
Query: 133 VHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN----------WAYVK 182
+HIL + + A ++ +V K V++ + L+ +C YV+
Sbjct: 243 IHILVRSRRLPDAQAVILRMVR--KSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQ 300
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+RE + FR G SI +CN LL GL+K+ +D W++Y+E+ R G+ N +T
Sbjct: 301 ARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYT 360
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
NI+ + CKN ++ FL +EE+G PD+VTYNTLI++YC++G L +AF L M
Sbjct: 361 LNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS 420
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P + TY ++NGLCK GK A + M+ G+SPD +YN L+ C+ M
Sbjct: 421 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 480
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++ + EM G+ PD + ++ K G L AL +++ G++ IY LI
Sbjct: 481 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 540
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ A + + + + G + YN ++ LCK +++A L EM +R +
Sbjct: 541 GGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 600
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P T+ LI + G +AV+L + M++ + PD LI+G+C ++ K L
Sbjct: 601 PDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 660
Query: 543 LGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +IY SY + N + G +S+ L + GF +TC ++
Sbjct: 661 WNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 715
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 216/435 (49%), Gaps = 1/435 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF D+++ N AY + GL+ E+F+ G +P + + N ++NGL K +
Sbjct: 389 VFPDVVTYNTLIN-AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 447
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
V +EM +IG+ P+T T+NIL C+N ++ +++ +G PDLV+++ LI
Sbjct: 448 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 507
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
K G L+ A +R M + PD V YT L+ G C+ G + EA ++ M+ +G D
Sbjct: 508 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLD 567
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YNT++ CKE + E+ L EM G++PD +T ++ GY K+G + A+ L
Sbjct: 568 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFE 627
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ + + Y+ LI C+ + L + P+ Y L+ C
Sbjct: 628 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 687
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V++A L DEMV++ + ++ T ++ +C G + +A + ML G++PD
Sbjct: 688 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 747
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LING+ E+++++A AL+ + D +YN + N F+ G + + + + +
Sbjct: 748 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 807
Query: 585 GFAPNNLTCKYMIHS 599
G P+ T +I+
Sbjct: 808 GVNPDRSTYTSLING 822
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 209/418 (50%), Gaps = 9/418 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y I++ L K+ A +L E+++ + P + L+ C + N
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPDTATYNILLVECCRNDN---- 478
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ ++ + F + G P +VS + L+ L K C+DQ + + +M G+ P+
Sbjct: 479 ----MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 534
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ IL FC+NG + + +++ E+G D+VTYNT+++ CK+ L++A L+ M
Sbjct: 535 IYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEM 594
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V PD T+TTL+NG K+G + +A LF M+ R L PD+V+YNTLI +CK +M
Sbjct: 595 TERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 654
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L +M+ IYP+ + I++ GY G + A L E+ G + + +
Sbjct: 655 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C+ A L + G VP YN L+ K +++ A L ++M + +
Sbjct: 715 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 774
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + TY ++ F GR EA +M +M+E G+ PD LING+ + ++ +A
Sbjct: 775 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 832
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 199/416 (47%), Gaps = 1/416 (0%)
Query: 188 ESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ K+F ++ G P +V+ N L+N + +++ +++ + M G+ P T+N +
Sbjct: 375 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 434
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+ CK G + G L+++ + G PD TYN L+ C+ + DA ++ M + V
Sbjct: 435 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 494
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+PDLV+++ L+ L K G + +A + F M + GL+PD V Y LI +C+ G M E+
Sbjct: 495 VPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 554
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ EM+ G D T I+ G KE L A L E+ GV + LI
Sbjct: 555 VRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYX 614
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+D A +L E + Q P + YN L++ CK + L ++M+ R I P+
Sbjct: 615 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 674
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+Y LI +C +G EA L DEM+E G C ++ GYC + KA+ L
Sbjct: 675 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 734
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + D +YN + N F ++ ++ + L + G P+ +T +++ +
Sbjct: 735 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G++ E+ K + L+ G +V+ N +LNGL K + + +++ EM G+ P
Sbjct: 542 GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 601
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TF L + + K+G+++K E + + PD+VTYNTLI +CK + L+
Sbjct: 602 DFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 661
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ ++Y L+NG C G V EA +L+ MV +G I++ NT++ YC+
Sbjct: 662 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 721
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ L M+ GI PD T ++ G+ KE +
Sbjct: 722 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM---------------------- 759
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+R FA L+ ++ G +P + YN ++ + + +A L+ +M++
Sbjct: 760 ----------DRAFA---LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 806
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
R + P STY +LI EA + DEML+ G +PD +
Sbjct: 807 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N+L+ K G ++ A+ +Y+ + R V ++ T ++N LCK K+ M
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+G+ PD+V+YNTLI AYC++G ++E+ L+ M G G+ P FT I+ G K G+ L
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A ++ E+ + G+S Y+ L+V C+++ A + + + G VP L ++ L+
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
L K + AL +M + + P Y LI FC G EA+ + DEMLE G
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D ++NG C EK +++A+ L ++ D ++ + N + +DG+++K + L
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ ++ P+ +T +I KG E
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSE 653
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 166/623 (26%), Positives = 285/623 (45%), Gaps = 92/623 (14%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVK-ND 119
+V+ IC SLK+G+S++ L PL + VL RC++D F + + N
Sbjct: 44 LVEKICFSLKQGNSNVRNHLIRLNPL-------AVVEVLYRCRNDLSLGQRFVDQLGFNF 96
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN-- 177
K TS + ++HIL + + S A C L + + V++ L+S +C
Sbjct: 97 PNFKHTSLSLSAMIHILVRSGRLSDAQS--CVLRMIRRSGVSRVEIVNSLVSTYSNCGSN 154
Query: 178 --------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+V+ +RE+++ F G+ SI +CN L+ L+++ ++ W++Y+
Sbjct: 155 DSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQ 214
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
E+ R G+ N +T NI+ + CK+G ++KV FL +++E+G PD+VTYNTLIS+Y +G
Sbjct: 215 EISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQG 274
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +AF L M + P + TY T++NGLCK GK A ++F M+ GLSPD +Y
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334
Query: 350 TLIFAYCKEGKMQESKSLLYEMM---------------------GN-------------- 374
+L+ CK+G E++++ +M GN
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ PD I++QGY ++G + A+NL E+ + G ++ Y+ ++ LC+ A
Sbjct: 395 GLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 454
Query: 435 TSLLERIGQDGYVP--------------------SLEIYNELMESLCKCDSVADALLLKD 474
L + + G P ++E++ ++ E K D V LL
Sbjct: 455 DKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDG 514
Query: 475 ---------------EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+MV + I P+ ++ L+ C G EA + DEM+ + P
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPT 574
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
IC +I GYC + + E L + + D SYN + F ++ ++SK L K
Sbjct: 575 VMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVK 634
Query: 580 RF--LRLGFAPNNLTCKYMIHSL 600
+ + G P+ T ++H
Sbjct: 635 KMEEKQGGLVPDVFTYNSILHGF 657
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 213/449 (47%), Gaps = 37/449 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY GL+ E+F+ GF P + + N ++NGL K ++ +V+ EM R G+ P
Sbjct: 269 AYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 328
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ T+ L CK GD + + PDLV +++++S + + G L+ A +
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++PD V YT L+ G C++G + EA L + M+ +G + D+V+YNT++ CK
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ L EM G++PD++T I++ G+ K G L +A+ L +++ + + Y
Sbjct: 449 KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTY 508
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ + A + + +P+ ++ L+ +LC +++A + DEM+
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI----------- 527
++IKP++ ++I +C G + + +++M+ G +PD LI
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSK 628
Query: 528 --------------------------NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+G+C E + +AEA+L ++ D +Y ++
Sbjct: 629 AFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSL 688
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
N F +L++ L+ GF+P++
Sbjct: 689 INGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 3/363 (0%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S DV DL+ C + + G + ++ F + G P V L+ G +
Sbjct: 357 RSRDVVPDLV-CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 415
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + + EM + G + T+N + H CK + + + ++ E G PD T
Sbjct: 416 ISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTI 475
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI +CK G L +A L++ M + + D+VTY TL++G K G + A +++ MV +
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P +S++ L+ A C +G + E+ + EM+ I P C +++GY + G
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI--GQDGYVPSLEIYNELME 458
+ ++ G Y+ LI ++ A L++++ Q G VP + YN ++
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILH 655
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C+ + + +A + +M++R + P STY +LI F EA DEML+ G P
Sbjct: 656 GFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Query: 519 DSQ 521
D +
Sbjct: 716 DDK 718
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 136/325 (41%), Gaps = 35/325 (10%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
++ LI ++ + +L +A+ + ++ + + L+ L + G V A +++ +
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ ++ + N ++ A CK+GKM++ + L E+ G+YPD T ++ Y +G +
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A L+ + G+ P + YN ++
Sbjct: 278 EAF-----------------------------------ELMHAMPSKGFSPGVYTYNTVI 302
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LCK A + EM+ + P +TYR+L+ C G + E ++ +M ++
Sbjct: 303 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVV 362
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD +++ + +++KA + I D Y + + G +S+ M L
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L+ G A + +T ++H L K
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCK 447
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 188/616 (30%), Positives = 283/616 (45%), Gaps = 76/616 (12%)
Query: 47 PLYNFL-PETQNPNKIVD--LICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQ 103
P+ + L ET +PN D L+ + DS + + +K L P+L IS LL
Sbjct: 34 PIIDHLHAETLHPNASTDSPLVITHQSLLDSIQSSQWHLIKHLAPNLSPSLISATLLSLH 93
Query: 104 SDSVSALTFFNWVK-NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL----VKD 158
S AL F + L+IK CL V +++ + + +L + +E VKD
Sbjct: 94 KKSDLALQFVTHIGFKGLDIK----TKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKD 149
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIR---------ESFKTFRKTLDVGFQPSIVSCN 209
H + + +D + + LIR ++F+ F + G P I + N
Sbjct: 150 VFHELAITRDRLGTKSSIVFDM----LIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
+L+ LKLN + W +Y EM R+ I +TFNI+ +V CK G + K F+ +E
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G P++VTYNT+I YC +GR+ A + IM R V PD TY +L++G+CK GK+ EA
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCK-------------------------------- 357
+ +M GL P V+YNTLI YC
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385
Query: 358 ---EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
EGKM E+ ++ +M +GI PD+ T I++ GY + G A NL E+ G+ +
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPT 445
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI L + NR AA L E+I ++G P L ++N L++ C ++ A L
Sbjct: 446 LVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLK 505
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EM RNI P TY L+ C G+ EA L+ EM G+ PD LI+GY
Sbjct: 506 EMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRG 565
Query: 535 DVNKAEAL------LGFFAKKFQIYDTESYNAVFNMFAED--GDLSKLMELQKRFLRLGF 586
D+N A + +GF +YNA+ ++ GDL++ EL K + G
Sbjct: 566 DINDAFTIRDEMLSIGFNPTLL------TYNALIQGLCKNQQGDLAE--ELLKEMVSKGI 617
Query: 587 APNNLTCKYMIHSLWK 602
P++ T +I + K
Sbjct: 618 TPDDSTYFSLIEGIGK 633
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 188/376 (50%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
++G +P++V+ N +++G ++ V + M G+ P+++T+ L CK G ++
Sbjct: 264 NLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLE 323
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ +G LEK++E G P VTYNTLI YC KG L AF M RR +LP + TY L+
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI 383
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ L EGK+ EA + M G+ PD ++YN LI YC+ G +++ +L EM+ GI
Sbjct: 384 HALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQ 443
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P T ++ K R+ +A +L ++ R G S +++ LI C + A +L
Sbjct: 444 PTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFAL 503
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L+ + + VP YN LM+ C+ V +A L EM R I+P +Y LI +
Sbjct: 504 LKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSK 563
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G +A ++ DEML G P LI G C + + AE LL K D +
Sbjct: 564 RGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDST 623
Query: 558 YNAVFNMFAEDGDLSK 573
Y ++ + D S+
Sbjct: 624 YFSLIEGIGKVDDSSE 639
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/578 (28%), Positives = 275/578 (47%), Gaps = 62/578 (10%)
Query: 69 LKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN 128
L++ LTLL + P S +LL+ Q DS L F +W ++
Sbjct: 31 LRRHPEQLTLLSSHFTP-------QASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQCK- 82
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV------- 181
CL +HIL + A + E+V D D+FQ L + C +
Sbjct: 83 -CLALHILTRYKLYKTAQSLAEEVVVNTVD-ETGEDLFQCLKNSYYQCKSSSAVFDLVVK 140
Query: 182 ---KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL-NCIDQCWQVYEEMGRIGIC 237
+V LI ++ GF P ++S N +L+ +++ + +++EM G+
Sbjct: 141 SCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS 200
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN +T+NIL FC G+++ F ++E G P++VTYNT+I +YCK ++ +AF L
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL------------------------- 332
R+M + + P+L++Y ++NGLC+EG+++E ++
Sbjct: 261 LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCN 320
Query: 333 ---FHR-------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
FH+ MV GLSP++V+Y TLI + CK G + + L +M G++P+ T
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ ++G L A ++ E+ G + + Y+ LI C R A+ LL+ +
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G++P + Y+ ++ C+ + A LK EMV + I P ++TY +LI C R G
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E L EML G+ PD LIN YC+E D++KA L +K D +YN +
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Query: 563 NMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMI 597
N F + S+ E ++ L+L + PN +T +I
Sbjct: 561 NGFNKQ---SRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 219/438 (50%), Gaps = 15/438 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+ I E+FK R G P+++S N ++NGL + + + ++ EEM + P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN L + +C G+ + ++ + G P++VTY TLI+S CK G LN A
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ TYTTL++G ++G +++A+Q+ MV G +P I++YN LI +C
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M+++ LL EM+ G PD + I+ G+ + L A L VE+ G+S Y
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R L + + G P Y L+ + C + AL L DEM+
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN---------- 528
+ P + TY LI F R+ EA L+ ++L +P+ LI+
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606
Query: 529 -----GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
G+CM+ +N+A+ +L +K + E YN + + ++ G++ K L K L
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666
Query: 584 LGFAPNNLTCKYMIHSLW 601
GFAP+++T + SL+
Sbjct: 667 SGFAPHSVTIMALAKSLY 684
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 231/498 (46%), Gaps = 39/498 (7%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI------SRVLLRCQSD 105
LP N I+D C K G++ L LK L P+L ++ + ++ S+
Sbjct: 235 LPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSE 294
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
+ ++ +V + + + YC + F A+ + E+V+ +V
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNV-------GNFHQALVLHAEMVK--NGLSPNVVT 345
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+ LI+ + K G + + + + D G P+ + L++G + + Q +
Sbjct: 346 YTTLIN-------SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
Q+ +EM G P T+N L + C G ++ +G L+++ E GF PD+V+Y+T+IS +
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C+ L AF L M + + PD+ TY++L+ GLCK+ ++ E LF M+ GL PD
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+Y +LI AYC EG + ++ L EM+ G PD T +++ G+ K+ R A L+++
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Query: 406 LQRFGVSISRDI-YDYLI---------------VALCQDNRPFAATSLLERIGQDGYVPS 449
L + S+ +I Y+ LI C A +LE + Q GY +
Sbjct: 579 L-LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLN 637
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
E+YN ++ K ++ A L EM+ P T AL G+ E L+D
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
Query: 510 EMLESGMLPDSQICRVLI 527
L+S + ++ + +VLI
Sbjct: 698 YTLKSCRITEAALAKVLI 715
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y I+ N + A ++ E+V K V + LI K
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMV--AKGISPDVATYSSLIQ-------GLCKQ 496
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E F++ L +G P V+ L+N +D+ ++++EM + G P+ T+
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS---------------YCKK 288
N+L + F K + L K+ E P+ +TYNTLI + +C K
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G +N+A + M ++ + Y +++G K G + +A+ L+ M+H G +P V+
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
L + EGK E LL + + + ++++ KEG + + N++ ++
Sbjct: 677 MALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMAL 736
Query: 409 FGV 411
G+
Sbjct: 737 SGL 739
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 164/578 (28%), Positives = 275/578 (47%), Gaps = 62/578 (10%)
Query: 69 LKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN 128
L++ LTLL + P S +LL+ Q DS L F +W ++
Sbjct: 31 LRRHPEQLTLLSSHFTP-------QASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQCK- 82
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV------- 181
CL +HIL + A + E+V D D+FQ L + C +
Sbjct: 83 -CLALHILTRYKLYKTAQSLAEEVVVNTVD-ETGEDLFQCLKNSYYQCKSSSAVFDLVVK 140
Query: 182 ---KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL-NCIDQCWQVYEEMGRIGIC 237
+V LI ++ GF P ++S N +L+ +++ + +++EM G+
Sbjct: 141 SCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVS 200
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN +T+NIL FC G+++ F ++E G P++VTYNT+I +YCK ++ +AF L
Sbjct: 201 PNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKL 260
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL------------------------- 332
R+M + + P+L++Y ++NGLC+EG+++E ++
Sbjct: 261 LRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCN 320
Query: 333 ---FHR-------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
FH+ MV GLSP++V+Y TLI + CK G + + L +M G++P+ T
Sbjct: 321 VGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRT 380
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ ++G L A ++ E+ G + + Y+ LI C R A+ LL+ +
Sbjct: 381 YTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMI 440
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G++P + Y+ ++ C+ + A LK EMV + I P ++TY +LI C R G
Sbjct: 441 ERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLG 500
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E L EML G+ PD LIN YC+E D++KA L +K D +YN +
Sbjct: 501 EVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLI 560
Query: 563 NMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMI 597
N F + S+ E ++ L+L + PN +T +I
Sbjct: 561 NGFNKQ---SRTKEAKRLLLKLLYEESVPNEITYNTLI 595
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 219/438 (50%), Gaps = 15/438 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+ I E+FK R G P+++S N ++NGL + + + ++ EEM + P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN L + +C G+ + ++ + G P++VTY TLI+S CK G LN A
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ TYTTL++G ++G +++A+Q+ MV G +P I++YN LI +C
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M+++ LL EM+ G PD + I+ G+ + L A L VE+ G+S Y
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R L + + G P Y L+ + C + AL L DEM+
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN---------- 528
+ P + TY LI F R+ EA L+ ++L +P+ LI+
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606
Query: 529 -----GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
G+CM+ +N+A+ +L +K + E YN + + ++ G++ K L K L
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666
Query: 584 LGFAPNNLTCKYMIHSLW 601
GFAP+++T + SL+
Sbjct: 667 SGFAPHSVTIMALAKSLY 684
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 231/498 (46%), Gaps = 39/498 (7%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI------SRVLLRCQSD 105
LP N I+D C K G++ L LK L P+L ++ + ++ S+
Sbjct: 235 LPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSE 294
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
+ ++ +V + + + YC + F A+ + E+V+ +V
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNV-------GNFHQALVLHAEMVK--NGLSPNVVT 345
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+ LI+ + K G + + + + D G P+ + L++G + + Q +
Sbjct: 346 YTTLIN-------SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAY 398
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
Q+ +EM G P T+N L + C G ++ +G L+++ E GF PD+V+Y+T+IS +
Sbjct: 399 QIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C+ L AF L M + + PD+ TY++L+ GLCK+ ++ E LF M+ GL PD
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+Y +LI AYC EG + ++ L EM+ G PD T +++ G+ K+ R A L+++
Sbjct: 519 VTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Query: 406 LQRFGVSISRDI-YDYLI---------------VALCQDNRPFAATSLLERIGQDGYVPS 449
L + S+ +I Y+ LI C A +LE + Q GY +
Sbjct: 579 L-LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLN 637
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
E+YN ++ K ++ A L EM+ P T AL G+ E L+D
Sbjct: 638 EEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
Query: 510 EMLESGMLPDSQICRVLI 527
L+S + ++ + +VLI
Sbjct: 698 YTLKSCRITEAALAKVLI 715
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 24/303 (7%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y I+ N + A ++ E+V K V + LI K
Sbjct: 446 PDVVSYSTIISGFCRNQELEKAFQLKVEMV--AKGISPDVATYSSLIQ-------GLCKQ 496
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E F++ L +G P V+ L+N +D+ ++++EM + G P+ T+
Sbjct: 497 RRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTY 556
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS---------------YCKK 288
N+L + F K + L K+ E P+ +TYNTLI + +C K
Sbjct: 557 NVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMK 616
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G +N+A + M ++ + Y +++G K G + +A+ L+ M+H G +P V+
Sbjct: 617 GLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTI 676
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
L + EGK E LL + + + ++++ KEG + + N++ ++
Sbjct: 677 MALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMAL 736
Query: 409 FGV 411
G+
Sbjct: 737 SGL 739
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 237/477 (49%), Gaps = 13/477 (2%)
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT-EDCNW----------AY 180
+VH+ + + S A ++ ++ + V+V + L+S +C Y
Sbjct: 1 MVHVFVRSRRLSDAQALILRMIR--RSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTY 58
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ +RE + FR G+ SI +CN LL GL+K++ ++ W+V+ E+ R GI N
Sbjct: 59 VQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNV 118
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T NI+ + CK+G D V FL ++E G D+VTYNTLI +YC++G L +AF +
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P L TY ++NGLCK+G+ A + M++ GLSPD +YNTL+ C+
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E+K + EM+ G+ PD + ++ + + L AL ++++FG+ IY
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ C++ A + + + + G V + YN ++ LCK + DA L DEMV+R
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P T+ LI C G +A+SL M + + PD LI+G+C ++ KA
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
L + + +Y + N + G +S+ L + G P +TC +I
Sbjct: 419 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVI 475
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 199/414 (48%), Gaps = 35/414 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + GL+ E+F+ D G +PS+ + N ++NGL K + + EM IG+ P
Sbjct: 162 AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP 221
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+N L C+ + + ++ +G PDLV++++LI+ + + L+ A +
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF 281
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + ++PD V YT LM+G C+ G + EA ++ M+ +G D+++YNT++ CKE
Sbjct: 282 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 341
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ ++ L EM+ G PD +T ++ G+ ++G + AL+L FG R+I
Sbjct: 342 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSL------FGTMTQRNIK 395
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
P + YN L++ CK + A L D M+
Sbjct: 396 -----------------------------PDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I P+ TY LI +C +G EA L D M+E G+ P C +I GYC D +K
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 486
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
A+ LG K D SYN + N F + ++ K + + G P+ +T
Sbjct: 487 ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIIT 540
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 213/422 (50%), Gaps = 11/422 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI-SCTEDCN 177
D +KP+ Y I++ L +++ A +L E++ + P + L+ SC D N
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN-IGLSPDTTTYNTLLVESCRRD-N 238
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
++ E+ + F + L G P +VS + L+ + +DQ + +M + G+
Sbjct: 239 FS--------EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLV 290
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ + +L H +C+NG++ + +++ E+G D++ YNT+++ CK+ L DA L
Sbjct: 291 PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKL 350
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M R LPD T+TTL++G C++G + +A LF M R + PDIV+YNTLI +CK
Sbjct: 351 FDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCK 410
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+M+++ L M+ I+P+ T I++ Y G + A L + G+ +
Sbjct: 411 VGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVT 470
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ +I C+ A L R+ G P YN L+ + D++ A L ++M
Sbjct: 471 CNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKME 530
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P + TY ++ FC GR EA ++ +M+E G+ PD LING+ + ++N
Sbjct: 531 KEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLN 590
Query: 538 KA 539
+A
Sbjct: 591 EA 592
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 160/341 (46%), Gaps = 35/341 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + E+ K + L+ G +++ N +LNGL K + ++++EM G P
Sbjct: 302 GYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALP 361
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TF L H C++G++ K + + PD+V YNTLI +CK G + A L+
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ +TY L+N C G V EA +L+ M+ +G+ P +V+ NT+I YC+
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 481
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ L M+ G+ PD + ++ G+ +E + A + ++++
Sbjct: 482 GDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEK---------- 531
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+G +P + YN +M C+ + +A L+ +M++
Sbjct: 532 -------------------------EGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ I P STY ALI EA DEML+ G PD
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 179/396 (45%), Gaps = 35/396 (8%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N F++L + + + + + +G+ + N+L+ K + A+ ++
Sbjct: 47 NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + R + ++ T ++N LCK+GK + M G+ D+V+YNTLI AYC+E
Sbjct: 107 REVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++E+ ++ M G+ P FT I+ G K+GR A +++E+ G+S Y
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL---------------------------- 450
+ L+V C+ + A + + + G VP L
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286
Query: 451 -------EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
IY LM C+ ++ +AL ++DEM+++ + Y ++ C +
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L DEM+E G LPD LI+G+C + ++ KA +L G ++ D +YN + +
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
F + G++ K EL + PN++T +I++
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 442
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 97/168 (57%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY VG + E+F+ + ++ G +P++V+CN ++ G + + + M G+ P
Sbjct: 442 AYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++N L + F + ++DK ++ K+E+EG PD++TYN +++ +C++GR+ +A +
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
R M + + PD TYT L+NG + + EA + M+ RG +PD V
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 166/630 (26%), Positives = 283/630 (44%), Gaps = 92/630 (14%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
+V+ IC SLK+G+ N+++ L L + VL RC++D F + +
Sbjct: 54 LVEKICFSLKQGN-------NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHF 106
Query: 121 -EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN-- 177
K TS + ++HIL + + S A L ++ + +++ L S +C
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIR--RSGVSRLEIVNSLDSTFSNCGSN 164
Query: 178 --------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
YV+ +RE+ + F GF SI +CN L+ L+++ ++ W VY+
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
E+ R G+ N +T NI+ + CK+G ++KV FL +++E+G PD+VTYNTLIS+Y KG
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +AF L M + P + TY T++NGLCK GK A ++F M+ GLSPD +Y
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 350 TLIFAYCKEGKMQESKSLLYEMM---------------------GN-------------- 374
+L+ CK+G + E++ + +M GN
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ PD I++QGY ++G + A+NL E+ + G ++ Y+ ++ LC+ A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 435 TSLLERIGQDGYVP--------------------SLEI---------------YNELMES 459
L + + P ++E+ YN L++
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
K + A + +MV + I P+ +Y L+ C G EA + DEM+ + P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
IC +I GYC + + E+ L + + D SYN + F + ++SK L K
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 580 RF--LRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + G P+ T ++H + + K
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 212/449 (47%), Gaps = 37/449 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY GL+ E+F+ GF P + + N ++NGL K ++ +V+ EM R G+ P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ T+ L CK GDV + + PDLV +++++S + + G L+ A +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++PD V YT L+ G C++G + A L + M+ +G + D+V+YNT++ CK
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ L EM ++PD++T I++ G+ K G L +A+ L +++ + + Y
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ + A + + +P+ Y+ L+ +LC +A+A + DEM+
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI----------- 527
+NIKP++ ++I +C G + + S +++M+ G +PD LI
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 528 --------------------------NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+G+C + + +AE +L ++ D +Y +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
N F +L++ + L+ GF+P++
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 3/363 (0%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S DV DL+ C + + G + ++ F + G P V L+ G +
Sbjct: 367 RSRDVVPDLV-CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + EM + G + T+N + H CK + + + ++ E PD T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI +CK G L +A L++ M + + D+VTY TL++G K G + A +++ MV +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P +SY+ L+ A C +G + E+ + EM+ I P C +++GY + G
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI--GQDGYVPSLEIYNELME 458
+ + ++ G Y+ LI ++ A L++++ Q G VP + YN ++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C+ + + +A ++ +M++R + P STY +I F EA + DEML+ G P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 519 DSQ 521
D +
Sbjct: 726 DDK 728
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 259/524 (49%), Gaps = 19/524 (3%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
LL +D L +F W + + ++ + I++ LA K+S L + V+ KD
Sbjct: 5 LLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKD 64
Query: 159 CPHSVDVFQDLISCTEDC-----------NWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
+SV IS + D A+V+ I F+ F++ D GF+ S++S
Sbjct: 65 --YSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLIS 122
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
CN LL+GL+K + VY EM + I N +FNI+ + CK G +++ +E ++
Sbjct: 123 CNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMK 182
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAF---YLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
G P+++TYNTLI YCK GR+ + + + M + + P+ VTY L++G CK+
Sbjct: 183 VWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDE 242
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
V A ++F M +GL P++V+YN LI C +GK+ E+ +L +M+ + + P+ T
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN 302
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ G+ K + A+NL ++++ GV + Y LI A C+D R A +L +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P + YN L+ LC+ V A L +EMV + + + TY LI C G S +A
Sbjct: 363 GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKA 422
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
V L+DEM E G+ P L++GYC E ++ A + +K + + ++N +
Sbjct: 423 VKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKG 482
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
F G L L L G PN T + + + ME+ F
Sbjct: 483 FCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEM---MEKGF 523
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 156/280 (55%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + F + G +P++V+ N L+NGL +D+ + ++M + PN T N+L +
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
FCKN V++ +E++G DP+ +TY TLI +YCK GR+ DAF LY +M R + P
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP 366
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++ TY L+ GLC++G V+ A L + MV + LS D+V+YN LI + CK+G+ +++ LL
Sbjct: 367 EVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLL 426
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ P T ++ GY +EG L +AL + ++R G + ++ LI C
Sbjct: 427 DEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLK 486
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
R A LL + + G VP+ Y + E + + V D
Sbjct: 487 GRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 187/344 (54%), Gaps = 19/344 (5%)
Query: 179 AYVKVGLIRESFKT---FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
Y K+G I + +K ++ + G P+ V+ N L++G K + +V+ EM R G
Sbjct: 199 GYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG 258
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ PN T+NIL + C +G VD+ +++ +P++VT+N LI+ +CK +N+A
Sbjct: 259 LRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAI 318
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L+ M ++ V P+ +TYTTL++ CK+G++ +A L++ M+ RG+ P++ +YN LI
Sbjct: 319 NLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGL 378
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C++G ++ ++SL+ EM+ + D T I++ K+G A+ L+ E+ G++ S
Sbjct: 379 CRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSH 438
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ L+ C++ AA + R+ + G ++ +N L++ C + DA L +E
Sbjct: 439 VTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNE 498
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
M++R + P+ +TY + +EM+E G +PD
Sbjct: 499 MLERGLVPNRTTYEI----------------IKEEMMEKGFVPD 526
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 173/592 (29%), Positives = 265/592 (44%), Gaps = 67/592 (11%)
Query: 44 LSNPLYNFL--------PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA-HE 94
LS+P FL P + + I+ I ++K S L + LK +LP L H
Sbjct: 13 LSSPRGGFLCFSTWMTPPTSHCHDPILTTISEAIKV--SPTKPLHSSLKRILPSLTPNHL 70
Query: 95 ISRVLLRCQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
I + L S S S L+FF W+ + + +YC + H L + S A +L + V
Sbjct: 71 IDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLL-QFV 129
Query: 154 ELVKDCPHSVDVFQDLISC--TEDCNW-------AYVKVGLIRESFKTFRKTLDVGFQPS 204
K + VF ++ T N AY G ++ + FR Q
Sbjct: 130 VSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIP 189
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
SC +L + L+KLN W YEE+ G P+ FN+L H CK +++
Sbjct: 190 FHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFG 249
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+I + G P +V++NTLI+ YCK G L+ F L R M V PD+ TY+ L+NGLCKEG
Sbjct: 250 EIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEG 309
Query: 325 KVREAHQLF-----------------------------------HRMVHRGLSPDIVSYN 349
++ +A++LF +M+ +G+ PD+++YN
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
TLI CK G ++E+K L+ EM G+ PD FT +++ G KEG L SAL + E+ +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ + + LI C++ + A L + + G P Y ++ CK V
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L EM P + TY L+ C G+ A L+D ML G++PD +L+ G
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEG 549
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL-MELQKR 580
+C + + L ++K + D SY ++ GDL K E QKR
Sbjct: 550 HCKHGNREDFDKLQ---SEKGLVQDYGSYTSLI------GDLRKTCKERQKR 592
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 162/394 (41%), Gaps = 70/394 (17%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
++L V + G + F +E G + ++ L+++Y G +DA +R++ +
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183
Query: 304 RNVL-----------------------------------PDLVTYTTLMNGLCKEGKVRE 328
N+ PD+ + LM+ LCKE K+ E
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINE 243
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A LF + RGL P +VS+NTLI YCK G + + L MM N ++PD FT +++
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G KEG+L D + L + +C G VP
Sbjct: 304 GLCKEGQL-------------------DDANKLFLEMCDR----------------GLVP 328
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + L+ C + + +M+ + +KP + TY LI C +G EA L+
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM + G+ PD +LI+G C E D+ A + K+ D ++ A+ + F +
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + + + L G P++ T +IH K
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 118/291 (40%), Gaps = 18/291 (6%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+Y T+ + LC + EA L L F ++GK S +
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSL------------------LQFVVSRKGKNSASSVFTSVL 146
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G + +++ Y G A+ +++ + I YL L + N
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A + E I GY P + +N LM LCK + +A LL E+ R ++P++ ++ L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I +C G + L M+E+ + PD VLING C E ++ A L +
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++ + N G ME+ ++ LR G P+ +T +I+ L K
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 239/496 (48%), Gaps = 15/496 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE+K + YCL HIL + A +L L ++ S +F
Sbjct: 844 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIG---SKSIF 900
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L+ CN Y+K G+I + +TF VGF+PS+ +CN +L ++
Sbjct: 901 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 960
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K + W ++ EM GICPN TFNIL + C G++ K L+++EE GF P +V
Sbjct: 961 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 1020
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNTL++ YCKKGR A L M + + D+ TY ++ LC + +A+ L +M
Sbjct: 1021 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 1080
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+SP+ V+YNTLI + KEGK+ + + EM + P+ T ++ G+ G
Sbjct: 1081 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 1140
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL L+ ++ G+ ++ Y L+ LC+ + A LLER+ + V Y L
Sbjct: 1141 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 1200
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + +A+ L M + P + TY +LI FC +G A ++ M SG+
Sbjct: 1201 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 1260
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+ + I LI +C +V +A + D + N + + DG L + +
Sbjct: 1261 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 1320
Query: 577 LQKRFLRLGFAPNNLT 592
R+G PN++T
Sbjct: 1321 FLCHMSRIGLVPNSIT 1336
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 190/431 (44%), Gaps = 5/431 (1%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
NW Y K G + + + + G + + + N ++ L + + + + ++M + I
Sbjct: 1027 NW-YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 1085
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+N L + F K G + ++ + P+ VTYN LI +C G +A
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M + + VTY TL+NGLCK K A +L RM + ++Y LI C
Sbjct: 1146 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 1205
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ L+ M +G+ PD T ++ G+ + G + SA ++ + R G+ +++
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 1265
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI CQ A + + +G+ N L+ SLC+ + +A M
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P+ TY +I + IG A S D+M++ G P L+ G C ++
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A+ L D+ YN + + G+L + + L + ++ P++ Y
Sbjct: 1386 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS----YT 1441
Query: 597 IHSLWKGMERK 607
SL G+ RK
Sbjct: 1442 YSSLLTGLCRK 1452
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 189/442 (42%), Gaps = 6/442 (1%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL-KL 218
P +VD E C K G + E+ F K + P + + LL GL K
Sbjct: 1399 PGAVDSVMYNTLLAETC-----KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 1453
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ MGR + PN + L K G F E++ ++G PD V +
Sbjct: 1454 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 1513
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N +I S ++G++ A + M V P+L TY L++G K+ + L+ M+
Sbjct: 1514 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 1573
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G+ PD +++++LI K G LL +M+ G D FT I++ Y + G++
Sbjct: 1574 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRK 1633
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +LV + GV RD Y+++ L + + +T +L + ++G +P Y L+
Sbjct: 1634 AFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 1693
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+C+ + A LKDEM A++ G++ +A+ ++D ML +LP
Sbjct: 1694 GMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1753
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
L++ +C + + +A L G D +YN + +GD + EL
Sbjct: 1754 TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELY 1813
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
+ PN T ++ ++
Sbjct: 1814 EEMRHRDLCPNITTYAVLVDAI 1835
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 209/462 (45%), Gaps = 15/462 (3%)
Query: 148 MLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
ML E V+LV + + V D+I+ + N + +VG I+ + + + G + +
Sbjct: 1209 MLDEAVQLVGNM-YKDGVNPDVITYSSLIN-GFCRVGNIKSAKEIICRMYRSGLVLNKII 1266
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
+ L+ + + + +VY M G + T N+L C++G + + FL +
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G P+ +TY+ +I+ Y G +AF + M + P TY +L+ GLCK G +
Sbjct: 1327 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 1386
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA + +R+ + + D V YNTL+ CK G + E+ +L +M+ N + PD++T ++
Sbjct: 1387 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 1446
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRD-------IYDYLIVALCQDNRPFAATSLLER 440
G ++G+ ++A+ L FG ++ R +Y L+ L + P AA E
Sbjct: 1447 TGLCRKGKAVTAVCL------FGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G P +N +++S + + A M + P+L+TY L+ F
Sbjct: 1501 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 1560
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+SL M+ G+ PD LI G + LLG + + D ++N
Sbjct: 1561 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 1620
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N ++E G + K +L LG P+ T ++ + L K
Sbjct: 1621 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 1662
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 181/402 (45%), Gaps = 5/402 (1%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++ L++GL K +D+ Q+ M + G+ P+ T++ L + FC+ G++ + +
Sbjct: 1195 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 1254
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ G + + Y+TLI ++C+ G + +A +Y +M D T L++ LC++GK
Sbjct: 1255 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 1314
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA + M GL P+ ++Y+ +I Y G + S +M+ G +P FT
Sbjct: 1315 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 1374
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+++G K G L+ A + L ++ +Y+ L+ C+ A +L +++ Q+
Sbjct: 1375 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 1434
Query: 446 YVPSLEIYNELMESLC-KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+P Y+ L+ LC K +V L M + P+ Y L+ G A
Sbjct: 1435 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 1494
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+EM++ G PD+ +I+ + KA + +YN + +
Sbjct: 1495 FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 1554
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
F++ L + + L +R G P+ LT HSL G+ +
Sbjct: 1555 FSKKQALLRYLSLYSTMMREGIFPDKLT----FHSLILGLSK 1592
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 167/359 (46%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F++L V+ K G +D E + GF P + T N +++S K R + L+R M
Sbjct: 916 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++ T+ L+NGLC EG +++A L +M G P IV+YNTL+ YCK+G+
Sbjct: 976 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L+ M+ GI D T + + R A L+ ++++ +S + Y+ L
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ++ + A + + + P+ YN L+ C +AL L D M +
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ + TY L+ C + A L++ M + M+ VLI+G C +++A
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L+G K D +Y+++ N F G++ E+ R R G N + +I++
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 159/362 (43%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + +F F + + G P V+ N +++ + + + + M G+CPN
Sbjct: 1487 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 1546
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NIL H F K + + + EG PD +T+++LI K G + L M
Sbjct: 1547 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 1606
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
L D T+ L+N + GK+R+A L + M G+ PD +YN + K+
Sbjct: 1607 IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 1666
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ES +L+EM+ NG+ P ++ G + G + A L E++ G +
Sbjct: 1667 RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 1726
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L + A +L+ + + +P++ + LM C+ +A+AL LK M +
Sbjct: 1727 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGL 1786
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
K + Y LI C G S A L +EM + P+ VL++ ++ + E
Sbjct: 1787 KLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEK 1846
Query: 542 LL 543
LL
Sbjct: 1847 LL 1848
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 205/486 (42%), Gaps = 23/486 (4%)
Query: 40 EHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLT------LLQNDLKPLLPHLGAH 93
E K N L+ ++P + L+ + K G+ H ++QN++ P ++
Sbjct: 1387 EAKKFLNRLH-YIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP-----DSY 1440
Query: 94 EISRVL--LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
S +L L + +V+A+ F + P Y +V L+ A E
Sbjct: 1441 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 1500
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+++ CP +V + SC+ + G + ++ F G P++ + N L
Sbjct: 1501 MMK-KGTCPDTVAFNAIIDSCS--------RRGQMMKANDFFSTMRWWGVCPNLATYNIL 1551
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
L+G K + + +Y M R GI P+ TF+ L K+G D L K+ EG
Sbjct: 1552 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 1611
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
D T+N LI+ Y + G++ AF L M V PD TY + NGL K+ RE+
Sbjct: 1612 LADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 1671
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ H M+ G+ P Y TLI C+ G +Q + L EM G +V+G
Sbjct: 1672 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 1731
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G+ A+ ++ + R + + + L+ C+D + A L + G +
Sbjct: 1732 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 1791
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
YN L+ +C A A L +EM R++ P+++TY L+ + L+ ++
Sbjct: 1792 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1851
Query: 512 LESGML 517
E G++
Sbjct: 1852 QERGLI 1857
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++D LI ++ A E +G G+ PS+ N ++ S+ K L EM
Sbjct: 916 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
D+ I P++ T+ LI C G +A +L+ +M E+G +P L+N YC +
Sbjct: 976 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A L+ + K D +YN + + +K L K+ + +PN +T +
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095
Query: 597 IHSLWK 602
I+ K
Sbjct: 1096 INGFVK 1101
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 252/508 (49%), Gaps = 17/508 (3%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
L DS L FF W + + I ++H+LA + K+S K+ L +LVK+
Sbjct: 51 LFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYS---KVRSFLDKLVKN 107
Query: 159 CPHSVD-VFQDLI-----SC-----TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
H+V VF L+ C T+ AYV I + + FR+ D GF+ S+ S
Sbjct: 108 EKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNS 167
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
CN LL+ L+K N + VY+EM + I PN TFNI + CK G ++K +E I+
Sbjct: 168 CNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK 227
Query: 268 EEGFDPDLVTYNTLISSYCKKG---RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
GF P++VTYNTLI +CKKG ++ A + + M + P+ +T+ TL++G CK+
Sbjct: 228 AWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDE 287
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
V A F M +GL P+IV+YN+LI GK+ E+ +L +M+G G+ P+ T
Sbjct: 288 NVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFN 347
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ K+ + A L ++ + + ++ +I A C+ +L + +
Sbjct: 348 ALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDE 407
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P++ YN L+ LC+ +V A L +EM + +K + TY LI +C G +A
Sbjct: 408 GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKA 467
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L+ EML G+ P+ L++GYCME ++ A + K+ + + +YN +
Sbjct: 468 EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKG 527
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLT 592
F + G L L L G PN T
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTT 555
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 196/404 (48%), Gaps = 38/404 (9%)
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
C N ++L + N ++ ++++ GF L + N L+S+ K + Y
Sbjct: 127 CANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQY 186
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+Y+ M +R + P+L T+ +NGLCK GK+ +A + + G SP+IV+YNTLI +C
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHC 246
Query: 357 KEG---KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
K+G KM + ++L EM+ N I P+ T ++ G+ K+ +L+A N E+QR G+
Sbjct: 247 KKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKP 306
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y+ LI L + + A +L +++ G P++ +N L+ CK + +A L
Sbjct: 307 NIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLF 366
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD--------SQICR- 524
D++ ++++ P+ T+ +I FC G E +L + ML+ G+ P+ + +CR
Sbjct: 367 DDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRN 426
Query: 525 --------------------------VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+LI G+C + + +KAE LLG + +Y
Sbjct: 427 QNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTY 486
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + + + +G+L ++++ + + G N +T +I K
Sbjct: 487 NTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 156/298 (52%), Gaps = 8/298 (2%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K CP+ + F LI + K + + F + G +P+IV+ N L+NGL
Sbjct: 268 KICPNEI-TFNTLID-------GFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+D+ ++++M +G+ PN TFN L + FCK + + + I E+ P+ +
Sbjct: 320 NNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI 379
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T+NT+I ++CK G + + F L+ M + P++ TY L+ GLC+ VR A +L + M
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ L D+V+YN LI +CK+G+ +++ LL EM+ G+ P+ T ++ GY EG L
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+AL + ++++ G + Y+ LI C+ + A LL + + G P+ Y+
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 165/317 (52%), Gaps = 16/317 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ ++ N L++G K + +EEM R G+ PN T+N L + NG +D+
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+K+ G P++VT+N LI+ +CKK + +A L+ + ++++P+ +T+ T+++ CK
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCK 390
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + E L + M+ G+ P++ +YN LI C+ ++ +K LL EM + D T
Sbjct: 391 AGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVT 450
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ G+ K+G A L+ E+ GV + Y+ L+ C + AA + ++
Sbjct: 451 YNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME 510
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G ++ YN L++ CK + DA L +EM+++ + P+ +TY
Sbjct: 511 KEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY-------------- 556
Query: 503 EAVSLMDEMLESGMLPD 519
+ V L EMLE G +PD
Sbjct: 557 DVVRL--EMLEKGFIPD 571
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 8/228 (3%)
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNW---AYVKVGLIRESFKTFRKTLDVGFQP 203
KM+ E +L D QDL+ N A+ K G++ E F LD G P
Sbjct: 357 KMIKEARKLFDDIAE-----QDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFP 411
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
++ + N L+ GL + + ++ EM + + T+NIL +CK+G+ K L
Sbjct: 412 NVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLL 471
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ G P+ VTYNTL+ YC +G L A + M + ++VTY L+ G CK
Sbjct: 472 GEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKT 531
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
GK+ +A++L + M+ +GL+P+ +Y+ + ++G + + + LY +
Sbjct: 532 GKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPDIEGHLYNI 579
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 125/289 (43%), Gaps = 40/289 (13%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
++ A ++F R+ G + S N L+ A K + E + + EM+ I P+ T
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN---RPFAATSLLERI 441
I + G K G+L A +++ +++ +G S + Y+ LI C+ + + A ++L+ +
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P+ +N L++ CK ++V A +EM + +KP++ TY +LI G+
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EA++L D+M+ G+ P+ ++NA+
Sbjct: 325 DEAIALWDKMVGLGLKPN-----------------------------------IVTFNAL 349
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKF 608
N F + + + +L PN +T MI + K ME F
Sbjct: 350 INGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 5/242 (2%)
Query: 366 SLLYEMMGNGIYP--DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
S+ + ++ G P + ++V Y + SA + +Q +G +S + + L+
Sbjct: 114 SVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLS 173
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
AL + N + + + + P+L +N + LCK + A + +++ P
Sbjct: 174 ALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSP 233
Query: 484 SLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++ TY LI C G +G+ A +++ EML + + P+ LI+G+C +++V A+
Sbjct: 234 NIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAK 293
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + +YN++ N + +G L + + L + + LG PN +T +I+
Sbjct: 294 NAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF 353
Query: 601 WK 602
K
Sbjct: 354 CK 355
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 250/517 (48%), Gaps = 11/517 (2%)
Query: 96 SRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
SRVL+ D+ AL FF W K + + TS YC++VHIL +S A +L EL+ L
Sbjct: 102 SRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICL 161
Query: 156 VKDCPHSVDVFQDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSI 205
+ P S DVF L + C A +++G++ E+ + F K P
Sbjct: 162 RRVLP-SWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKP 220
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
SCN LL+ L K+ D + +++MG GI + T+NI+ CK GD++ +
Sbjct: 221 RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQ 280
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
++E GF PD+VTYN+LI + K G L++ ++ M + PD++TY L+N CK +
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ +A + H M GL P++V+Y+T I A+CKEG +QE+ +M + P+ FT
Sbjct: 341 MPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTS 400
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ K G L AL LV E+ + G+ ++ Y L+ LC++ R A + + G
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+ E Y L+ K + A + EM ++ IKP L Y ++ C R EA
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 520
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ E+ ESG+ ++ I L++ Y +A LL I +Y A+ +
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G + + M R +G PN ++ L K
Sbjct: 581 CKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCK 617
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 208/404 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F + + GF P IV+ N L++G KL +D+C ++E+M P+
Sbjct: 267 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 326
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FCK + K FL +++ G P++VTY+T I ++CK+G L +A + M
Sbjct: 327 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 386
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P+ TYT+L++ CK G + EA +L ++ G+ ++V+Y L+ C+EG+M
Sbjct: 387 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 446
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ + M+ G+ P+ T +V G+ K + A +++ E++ + +Y +
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 506
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC ++R A L+ I + G + IY LM++ K +AL L +EM+D +
Sbjct: 507 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL 566
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY ALI C G EA+ M E G+ P+ + L++G C A+
Sbjct: 567 IATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
L K + D +Y A+ + + G+L + + L+ R + +G
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 152/345 (44%), Gaps = 35/345 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + E+ K + L G + ++V+ LL+GL + + + +V+ M G+ P
Sbjct: 404 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAP 463
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL----------------------- 275
N T+ L H F K +++ L++++E+ PDL
Sbjct: 464 NQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLI 523
Query: 276 ------------VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
V Y TL+ +Y K G+ +A L M ++ VTY L++GLCK
Sbjct: 524 GEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKS 583
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G V+EA F RM GL P++ Y L+ CK + +K L EM+ G+ PD
Sbjct: 584 GLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAY 643
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G L ALNL + G+ + Y LI L + A +LL+ +
Sbjct: 644 TALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIG 703
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
G +P +Y L++ V +AL L++EM R + LS +
Sbjct: 704 KGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGLSDH 748
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 15/293 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTED-CNW 178
+ P Y +VH + +A +L E+ E + D + L C E
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL--CNESRLEE 518
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + +G I+ES G + V L++ K + + EEM +G+
Sbjct: 519 AKLLIGEIKES----------GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIA 568
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ L CK+G V + ++ E G P++ Y L+ CK A L+
Sbjct: 569 TEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLF 628
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + ++PD + YT L++G K G ++EA L RM+ G+ D+ +Y LI+
Sbjct: 629 DEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHS 688
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
G++Q++++LL EM+G G+ PD +++ Y G++ AL L E+ + G+
Sbjct: 689 GQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 156/379 (41%), Gaps = 21/379 (5%)
Query: 232 GRIGICPNTHTFNILTHV-FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
GRIG + + IL H+ FC D N L+ +L+ ++ S+
Sbjct: 124 GRIGFQHTSEAYCILVHILFCARFYSD-ANAVLK---------ELICLRRVLPSW----- 168
Query: 291 LNDAFYLYRIMYRRNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
D F L + RNV +P + L + L + G + EA + F +M + P S N
Sbjct: 169 --DVFDL--LWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCN 224
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
L+ K G+ S+ +M GI FT I++ KEG L A +L +++
Sbjct: 225 ALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA 284
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G + Y+ LI + + E++ P + YN L+ CK + + A
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM +KP++ TY I FC G EA+ +M + P+ LI+
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C ++ +A L+ + + +Y A+ + E+G + + E+ + L G APN
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464
Query: 590 NLTCKYMIHSLWKGMERKF 608
T ++H K E ++
Sbjct: 465 QETYTALVHGFIKAKEMEY 483
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 239/496 (48%), Gaps = 15/496 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE+K + YCL HIL + A +L L ++ S +F
Sbjct: 93 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQM---GIGSKSIF 149
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L+ CN Y+K G+I + +TF VGF+PS+ +CN +L ++
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K + W ++ EM GICPN TFNIL + C G++ K L+++EE GF P +V
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNTL++ YCKKGR A L M + + D+ TY ++ LC + +A+ L +M
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+SP+ V+YNTLI + KEGK+ + + EM + P+ T ++ G+ G
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL L+ ++ G+ ++ Y L+ LC+ + A LLER+ + V Y L
Sbjct: 390 EEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVL 449
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + +A+ L M + P + TY +LI FC +G A ++ M SG+
Sbjct: 450 IDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGL 509
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+ + I LI +C +V +A + D + N + + DG L + +
Sbjct: 510 VLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEK 569
Query: 577 LQKRFLRLGFAPNNLT 592
R+G PN++T
Sbjct: 570 FLCHMSRIGLVPNSIT 585
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 190/431 (44%), Gaps = 5/431 (1%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
NW Y K G + + + + G + + + N ++ L + + + + ++M + I
Sbjct: 276 NW-YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMI 334
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+N L + F K G + ++ + P+ VTYN LI +C G +A
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 394
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M + + VTY TL+NGLCK K A +L RM + ++Y LI C
Sbjct: 395 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 454
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ L+ M +G+ PD T ++ G+ + G + SA ++ + R G+ +++
Sbjct: 455 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 514
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI CQ A + + +G+ N L+ SLC+ + +A M
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P+ TY +I + IG A S D+M++ G P L+ G C ++
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A+ L D+ YN + + G+L + + L + ++ P++ Y
Sbjct: 635 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS----YT 690
Query: 597 IHSLWKGMERK 607
SL G+ RK
Sbjct: 691 YSSLLTGLCRK 701
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 189/442 (42%), Gaps = 6/442 (1%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL-KL 218
P +VD E C K G + E+ F K + P + + LL GL K
Sbjct: 648 PGAVDSVMYNTLLAETC-----KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 702
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ MGR + PN + L K G F E++ ++G PD V +
Sbjct: 703 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 762
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N +I S ++G++ A + M V P+L TY L++G K+ + L+ M+
Sbjct: 763 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 822
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G+ PD +++++LI K G LL +M+ G D FT I++ Y + G++
Sbjct: 823 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRK 882
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +LV + GV RD Y+++ L + + +T +L + ++G +P Y L+
Sbjct: 883 AFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 942
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+C+ + A LKDEM A++ G++ +A+ ++D ML +LP
Sbjct: 943 GMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1002
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
L++ +C + + +A L G D +YN + +GD + EL
Sbjct: 1003 TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELY 1062
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
+ PN T ++ ++
Sbjct: 1063 EEMRHRDLCPNITTYAVLVDAI 1084
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 209/462 (45%), Gaps = 15/462 (3%)
Query: 148 MLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
ML E V+LV + + V D+I+ + N + +VG I+ + + + G + +
Sbjct: 458 MLDEAVQLVGNM-YKDGVNPDVITYSSLIN-GFCRVGNIKSAKEIICRMYRSGLVLNKII 515
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
+ L+ + + + +VY M G + T N+L C++G + + FL +
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G P+ +TY+ +I+ Y G +AF + M + P TY +L+ GLCK G +
Sbjct: 576 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLV 635
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA + +R+ + + D V YNTL+ CK G + E+ +L +M+ N + PD++T ++
Sbjct: 636 EAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 695
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRD-------IYDYLIVALCQDNRPFAATSLLER 440
G ++G+ ++A+ L FG ++ R +Y L+ L + P AA E
Sbjct: 696 TGLCRKGKAVTAVCL------FGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 749
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G P +N +++S + + A M + P+L+TY L+ F
Sbjct: 750 MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 809
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+SL M+ G+ PD LI G + LLG + + D ++N
Sbjct: 810 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNI 869
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N ++E G + K +L LG P+ T ++ + L K
Sbjct: 870 LINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 911
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 167/359 (46%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F++L V+ K G +D E + GF P + T N +++S K R + L+R M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++ T+ L+NGLC EG +++A L +M G P IV+YNTL+ YCK+G+
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L+ M+ GI D T + + R A L+ ++++ +S + Y+ L
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ++ + A + + + P+ YN L+ C +AL L D M +
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ + TY L+ C + A L++ M + M+ VLI+G C +++A
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L+G K D +Y+++ N F G++ E+ R R G N + +I++
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 523
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 181/402 (45%), Gaps = 5/402 (1%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++ L++GL K +D+ Q+ M + G+ P+ T++ L + FC+ G++ + +
Sbjct: 444 IAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 503
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ G + + Y+TLI ++C+ G + +A +Y +M D T L++ LC++GK
Sbjct: 504 MYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGK 563
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA + M GL P+ ++Y+ +I Y G + S +M+ G +P FT
Sbjct: 564 LGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGS 623
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+++G K G L+ A + L ++ +Y+ L+ C+ A +L +++ Q+
Sbjct: 624 LLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNN 683
Query: 446 YVPSLEIYNELMESLC-KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+P Y+ L+ LC K +V L M + P+ Y L+ G A
Sbjct: 684 VLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAA 743
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+EM++ G PD+ +I+ + KA + +YN + +
Sbjct: 744 FYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHG 803
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
F++ L + + L +R G P+ LT HSL G+ +
Sbjct: 804 FSKKQALLRYLSLYSTMMREGIFPDKLT----FHSLILGLSK 841
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 159/362 (43%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + +F F + + G P V+ N +++ + + + + M G+CPN
Sbjct: 736 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 795
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NIL H F K + + + EG PD +T+++LI K G + L M
Sbjct: 796 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 855
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
L D T+ L+N + GK+R+A L + M G+ PD +YN + K+
Sbjct: 856 IMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAF 915
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ES +L+EM+ NG+ P ++ G + G + A L E++ G +
Sbjct: 916 RESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAM 975
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L + A +L+ + + +P++ + LM C+ +A+AL LK M +
Sbjct: 976 VRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGL 1035
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
K + Y LI C G S A L +EM + P+ VL++ ++ + E
Sbjct: 1036 KLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEK 1095
Query: 542 LL 543
LL
Sbjct: 1096 LL 1097
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 205/486 (42%), Gaps = 23/486 (4%)
Query: 40 EHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLT------LLQNDLKPLLPHLGAH 93
E K N L+ ++P + L+ + K G+ H ++QN++ P ++
Sbjct: 636 EAKKFLNRLH-YIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP-----DSY 689
Query: 94 EISRVL--LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
S +L L + +V+A+ F + P Y +V L+ A E
Sbjct: 690 TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 749
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+++ CP +V + SC+ + G + ++ F G P++ + N L
Sbjct: 750 MMK-KGTCPDTVAFNAIIDSCS--------RRGQMMKANDFFSTMRWWGVCPNLATYNIL 800
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
L+G K + + +Y M R GI P+ TF+ L K+G D L K+ EG
Sbjct: 801 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 860
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
D T+N LI+ Y + G++ AF L M V PD TY + NGL K+ RE+
Sbjct: 861 LADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTV 920
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ H M+ G+ P Y TLI C+ G +Q + L EM G +V+G
Sbjct: 921 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 980
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G+ A+ ++ + R + + + L+ C+D + A L + G +
Sbjct: 981 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 1040
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
YN L+ +C A A L +EM R++ P+++TY L+ + L+ ++
Sbjct: 1041 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1100
Query: 512 LESGML 517
E G++
Sbjct: 1101 QERGLI 1106
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++D LI ++ A E +G G+ PS+ N ++ S+ K L EM
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
D+ I P++ T+ LI C G +A +L+ +M E+G +P L+N YC +
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A L+ + K D +YN + + +K L K+ + +PN +T +
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344
Query: 597 IHSLWK 602
I+ K
Sbjct: 345 INGFVK 350
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 271/580 (46%), Gaps = 57/580 (9%)
Query: 72 GDSHLTLLQN---DLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN 128
D LT L+ L L + S +LL+ Q+D L F NW T
Sbjct: 25 ADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRC 82
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW---------- 178
C+ +HIL + A + ++ D ++ VF+ L + C
Sbjct: 83 KCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVK 142
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-LNCIDQCWQVYEEMGRIGIC 237
+Y ++ LI ++ GF P ++S N +L+ ++ I V++EM +
Sbjct: 143 SYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS 202
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+NIL FC G++D +K+E +G P++VTYNTLI YCK +++D F L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R M + + P+L++Y ++NGLC+EG+++E + M RG S D V+YNTLI YCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFT--------CQ------------------------- 384
EG ++ + EM+ +G+ P T C+
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 385 --IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+V G+ ++G + A ++ E+ G S S Y+ LI C + A ++LE +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + Y+ ++ C+ V +AL +K EMV++ IKP TY +LI FC R+
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L +EML G+ PD LIN YCME D+ KA L +K + D +Y+ +
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 563 NMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMIHS 599
N + S+ E ++ L+L + P+++T +I +
Sbjct: 563 NGLNKQ---SRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 224/497 (45%), Gaps = 24/497 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ P Y +++ + A+ + ++ K C +V + LI Y
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKME--TKGCLPNVVTYNTLID-------GY 250
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+ I + FK R G +P+++S N ++NGL + + + V EM R G +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L +CK G+ + ++ G P ++TY +LI S CK G +N A
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + P+ TYTTL++G ++G + EA+++ M G SP +V+YN LI +C GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+++ ++L +M G+ PD + ++ G+ + + AL + E+ G+ Y
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ R A L E + + G P Y L+ + C + AL L +EMV++
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV--------------- 525
+ P + TY LI R+ EA L+ ++ +P
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI G+CM+ + +A+ + K D +YN + + GD+ K L K ++ G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 586 FAPNNLTCKYMIHSLWK 602
F + +T ++ +L K
Sbjct: 671 FLLHTVTVIALVKALHK 687
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 212/429 (49%), Gaps = 15/429 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + L G PS+++ L++ + K +++ + ++M G+CP
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L F + G +++ L ++ + GF P +VTYN LI+ +C G++ DA +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+V+Y+T+++G C+ V EA ++ MV +G+ PD ++Y++LI +C++
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +E+ L EM+ G+ PD FT ++ Y EG L AL L E+ GV Y
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES---------------LCKC 463
LI L + +R A LL ++ + VPS Y+ L+E+ C
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ +A + + M+ +N KP + Y +I C G +A +L EM++SG L +
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ E VN+ +++ + ++ + E + + +G++ ++++ +
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 584 LGFAPNNLT 592
GF PN ++
Sbjct: 739 DGFLPNGIS 747
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 257/547 (46%), Gaps = 27/547 (4%)
Query: 78 LLQNDLKPLLPHLGAHE--------ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNY 129
L QND L HL H I ++L +CQ+ L N ++ P S
Sbjct: 47 LKQNDFSSLRTHL-LHSNSTLTLTLIPQLLQKCQN---YPLLLPNLIQTIASTSPNPSII 102
Query: 130 CLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW----------- 178
++H L + K A +L ++ K V+V LIS +
Sbjct: 103 ATLIHFLVQSKKLPEAQSLLLRIIR--KSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLL 160
Query: 179 --AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
YV+ +RE + F+ GF SI +CN LL ++K+ +D W+VYE+ + G
Sbjct: 161 IRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGN 220
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
N +T NI+ + CK+G +D V +L ++EE+G DLVTYNTL+++YC++G +++AF
Sbjct: 221 IVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFG 280
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M + + P L TY L+NGLCKEG A ++ M+ GL P+ ++N ++ C
Sbjct: 281 LVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESC 340
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
++ + E++ + EM+ G+ PD + IV + + G L AL +++ G+
Sbjct: 341 RKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTV 400
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI C+++ A + + + G V + YN L+ LC+ + DA L EM
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V+R + P T LI +C G +A+SL + M + PD L++G+C ++
Sbjct: 461 VERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEM 520
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
KA+ L + S++ + N F G +S+ L G P +TC +
Sbjct: 521 EKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTI 580
Query: 597 IHSLWKG 603
I +
Sbjct: 581 IKGYLRA 587
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 214/435 (49%), Gaps = 1/435 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V+ DL++ N AY + GL+ E+F G +P + + N L+NGL K ++
Sbjct: 255 VYADLVTYNTLVN-AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERA 313
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+V +EM +G+CPN TFN + C+ DV + ++ + G PDL+++++++
Sbjct: 314 KRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGV 373
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+ + G L A + M ++PD V YT L+NG C+ V A ++ + MV RG D
Sbjct: 374 FSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMD 433
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YNTL+ C+ + ++ L EM+ G++PD +T ++ GY K+G + AL+L
Sbjct: 434 VVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFE 493
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ + Y+ L+ C+ A L + PS ++ L+ C
Sbjct: 494 TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLG 553
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V++A L DEM ++ IKP+L T +I + G +A ++ M+ G+ PD
Sbjct: 554 LVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYN 613
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LIN + E++ ++A L+ ++ + + +YNA+ F+ G + + + + +
Sbjct: 614 TLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDK 673
Query: 585 GFAPNNLTCKYMIHS 599
G P+ T +I+
Sbjct: 674 GINPDKSTYTSLING 688
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 178/357 (49%), Gaps = 1/357 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V DLIS + + + G + + F K VG P V L+NG + + +
Sbjct: 360 VVPDLISFSSIVG-VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGA 418
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ EM G + T+N L + C+ +D + +++ E G PD T TLI
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YCK G + A L+ M R++ PD+VTY TLM+G CK G++ +A +L++ M+ R + P
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+S++ LI +C G + E+ L EM GI P TC I++GY + G L A + +
Sbjct: 539 YISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN 598
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ GV Y+ LI + ++ A L+ + + G +P+L YN ++ +
Sbjct: 599 TMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHG 658
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +A ++ +M+D+ I P STY +LI + EA + DEML+ G +PD +
Sbjct: 659 RMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDK 715
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 227/446 (50%), Gaps = 16/446 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+ I E+FK R G +P++++ N ++NGL ++ I++ V EM R G P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + +CK G+ + ++ G PD+VTY +LI++ CK G LN A +
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R + P+ VTYT+L+NG ++G + EA++++ M+ G P IV+YN L+ +C
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M+E+ LL M G G+ PD + I+ G+ + L A + E+ GVS Y
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R A L + + +P Y L+ CK + +AL L DEM+
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLM-----DEMLESGMLPDSQI----------C 523
+ P TY LI R+ EA L+ DE + +G+ D+ I
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSV 606
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI G+CM+ +N+A+ + K+ Q + YN + + DG++ K +L K +
Sbjct: 607 VALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVD 666
Query: 584 LGFAPNNLTCKYMIHSLW-KGMERKF 608
GF P+ +T ++ +L+ +GM+ +
Sbjct: 667 FGFIPHTVTIIALVKALYSEGMDEQL 692
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 263/550 (47%), Gaps = 31/550 (5%)
Query: 69 LKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN 128
LK+ HL + + + P L S +LL+ Q+D L F N+ K P
Sbjct: 31 LKRYPYHLNSISSQITPELA-------SYLLLQTQNDRTLTLKFINFAKPHQFFNPHCK- 82
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD-----VFQDLISCTEDCNWAYVKV 183
C+ +HIL + A + +L E +SVD FQ L CN +
Sbjct: 83 -CIALHILTKFKLYKTAQNLAQDLAE------NSVDEKGNYFFQCLKDTYFMCNSSSAVF 135
Query: 184 GLIRES---FKTFRKTLDV-------GFQPSIVSCNFLLNGLLK-LNCIDQCWQVYEEMG 232
L+ +S K L++ GF P ++S N +L+ +++ + +VY EM
Sbjct: 136 DLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMI 195
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G+ N ++NIL FC G+++ F E++E P++VTYNT+I +YCK R++
Sbjct: 196 ASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRID 255
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+AF L R M + P+L+TY ++NGLC+ G++ E + M +G +PD V+YNTL+
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLV 315
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
YCK G ++ L EM+ NG+ PD T ++ K G L A+ ++ G+
Sbjct: 316 NGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLR 375
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI Q A + + + + G+ P++ YN L+ C + +A+ L
Sbjct: 376 PNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGL 435
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
M + + P + +Y +I FC A + EM+E G+ PD+ LI G C
Sbjct: 436 LRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCE 495
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
++ +N+A L K + D +Y ++ N + ++GDL++ + L ++ GF P+ +T
Sbjct: 496 QRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVT 555
Query: 593 CKYMIHSLWK 602
+I+ L K
Sbjct: 556 YNVLINGLNK 565
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 209/426 (49%), Gaps = 15/426 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG ++ + L G P +V+ L+N + K +++ + +++M G+ P
Sbjct: 317 GYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + F + G +D+ +++ GF P +VTYN L++ +C GR+ +A L
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + + PD+V+Y+T++ G C+ ++ A Q+ MV +G+SPD ++Y++LI C++
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E+ L EM+ + PD FT ++ GY KEG L ALNL E+ + G Y
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTY 556
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK----- 473
+ LI L + R A LL ++ D +P+ Y+ L+ES + + L+K
Sbjct: 557 NVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMK 616
Query: 474 ----------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ M+ RN KP+ + Y +I C G +A L EM++ G +P +
Sbjct: 617 GLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTI 676
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ E + ++ + ++ D E A+ + ++G++ + L +
Sbjct: 677 IALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAK 736
Query: 584 LGFAPN 589
GF P+
Sbjct: 737 DGFLPS 742
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 256/526 (48%), Gaps = 20/526 (3%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKP-LLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
++ ++C + KG H L LKP + +L + +++VLL D + FF WV
Sbjct: 36 TQLAKIVCGIVVKG--HWNSL---LKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWV 90
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED- 175
+++L K + + ++H LA + +F A +L + V+D S V ++ +D
Sbjct: 91 ESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIA--VRDYLSSPSVLNAVVRIHDDP 148
Query: 176 ------CNWA---YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+W Y + +++ + F GF+P + +C LLN L K + W+
Sbjct: 149 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 208
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
VY++M R+G+ PN H FN+L H CK+GDV+K L ++E PDL TYNTLIS YC
Sbjct: 209 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 268
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE-GKVREAHQLFHRMVHRGLSPDI 345
KKG +A + M R V PD+VTY +L+ G C+E + EA +L M GL P +
Sbjct: 269 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGV 328
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+YN+++ C+EGK++++ LL EM + PD TC ++ Y K G + SA+ + +
Sbjct: 329 VTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKK 388
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G+ + + LI C+ + +A L + G+ PS Y+ L++S D+
Sbjct: 389 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 448
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ L DE+ + + +S YRALI C I + A + M GM DS +
Sbjct: 449 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 508
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L Y A +L K+ + + Y +A DG +
Sbjct: 509 LAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSI 554
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 136/337 (40%), Gaps = 73/337 (21%)
Query: 272 DPDLVT--YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
DPD + + L+ Y DA ++ M P L T L+N L K
Sbjct: 147 DPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMV 206
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+++ +MV G+ P+I +N LI A CK G +++++ LL EM I+PD FT
Sbjct: 207 WKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT------- 259
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y+ LI C+ + A + +R+ + G P
Sbjct: 260 ----------------------------YNTLISLYCKKGMHYEALGIQDRMERGGVSPD 291
Query: 450 LEIYNELMESLCK-CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ YN L+ C+ + + +AL L++ M + P + TY +++ C G+ +A L+
Sbjct: 292 IVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLL 351
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EM E + PD+ C LIN YC +
Sbjct: 352 NEMSERKVEPDNVTCNTLINAYC-----------------------------------KI 376
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
GD+ M+++K+ L G P+ T K +IH K E
Sbjct: 377 GDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHE 413
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS--------------- 465
+I L + + A +LLERI Y+ S + N ++ DS
Sbjct: 106 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 165
Query: 466 --VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
DA+ + + M KP L L+ + + +M+ G++P+ I
Sbjct: 166 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 225
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
VLI+ C DV KAE LL +F D +YN + +++ + G + + +Q R R
Sbjct: 226 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 285
Query: 584 LGFAPNNLTCKYMIHSL 600
G +P+ +T +I+
Sbjct: 286 GGVSPDIVTYNSLIYGF 302
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 263/564 (46%), Gaps = 52/564 (9%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
LKP + VL+ + D L FF+W + L P+ + C++V I +
Sbjct: 84 LKPFESKFRPDHLIWVLMSIRDDYKLVLDFFDWAR--LRRDPSLESLCIVVQIAVASKDL 141
Query: 143 SFAMKMLCELVELVK-DCPHSVDVFQDLISCTEDCNWA------------YVKVGLIRES 189
A +++ E E D +S D F + + T +W V+ GL+ E+
Sbjct: 142 RMAHRLVFEFWEKPHLDVGNSFDRFTERLIYTYK-DWGAHPLVFDVFFQVLVEAGLLLEA 200
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLL-KLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
K F K L+ G S+ SCN L L + I ++V+ E +G+C NT ++NI+ H
Sbjct: 201 GKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILH 260
Query: 249 VFCKNGDVDK-----------------------VNGF------------LEKIEEEGFDP 273
+ C+ G V + V+G+ +E+++ +G P
Sbjct: 261 LLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKP 320
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+ TYN++IS CK GR+ +A + R+M + + PD V YTTL++G K G V ++LF
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLF 380
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M + + PD V+Y ++I C+ GK+ E++ L EM+ G+ PD T ++ GY K
Sbjct: 381 DEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKA 440
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + A +L ++ G++ + Y L+ LC+ A LL + + G P++ Y
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ LCK ++ A+ L +EM P TY ++ +C +G +A L+ ML+
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD 560
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ P VL+NG+CM + E L+ + K + + ++N++ + ++
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+E+ K G P+ T +I
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILI 644
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 189/396 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + R + P V L++G K + +++++EM R I P+
Sbjct: 334 KTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFV 393
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + H C+ G V + ++ +G PD VTY LI YCK G + +AF L+ M
Sbjct: 394 TYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQM 453
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTYT L++GLCK G+V A++L H M +GL P++ +YN LI CK G +
Sbjct: 454 VEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNI 513
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ EM G +PDT T I+ Y K G + A L+ + G+ + ++ L
Sbjct: 514 EQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVL 573
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C L++ + G +P+ +N LM+ C +++ + + M + +
Sbjct: 574 MNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGV 633
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L EM+E G + LI G+ K +A
Sbjct: 634 VPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARK 693
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L I + E Y+ ++ E+G+ +EL
Sbjct: 694 LFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 220/461 (47%), Gaps = 9/461 (1%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL 185
+ +Y +I+H+L K A +L ++ E + P D++S + + Y +V
Sbjct: 252 TVSYNIILHLLCQLGKVKEAHSLLIQM-EFRGNVP-------DVVSYSVIVD-GYCQVEQ 302
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ + K + G +P+ + N +++ L K + + QV M I P+ +
Sbjct: 303 LGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTT 362
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L F K+G+V ++++ + PD VTY ++I C+ G++ +A L+ M +
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD VTYT L++G CK G+++EA L ++MV +GL+P++V+Y L+ CK G++ +
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL+EM G+ P+ T ++ G K G + A+ L+ E+ G Y ++ A
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ A LL + G P++ +N LM C + D L M+D+ I P+
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+T+ +L+ +C + + M G++PD+ +LI G+C +++ +A L
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+K SYN++ F + + +L + GF
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGF 703
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 178/359 (49%), Gaps = 9/359 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+I P Y ++H L K A K+ E+ L K + LI Y
Sbjct: 387 KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM--LSKGLKPDEVTYTALID-------GY 437
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G ++E+F + ++ G P++V+ L++GL K +D ++ EM G+ PN
Sbjct: 438 CKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNV 497
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L + CK G++++ +E+++ GF PD +TY T++ +YCK G + A L RI
Sbjct: 498 CTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRI 557
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P +VT+ LMNG C G + + +L M+ +G+ P+ ++N+L+ YC
Sbjct: 558 MLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNN 617
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+ + + M G+ PDT T I+++G+ K + A L E+ G S++ Y+
Sbjct: 618 MRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNS 677
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI + + A L E + G++ EIY+ ++ + + + L L DE +++
Sbjct: 678 LIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/580 (28%), Positives = 273/580 (47%), Gaps = 57/580 (9%)
Query: 72 GDSHLTLLQN---DLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN 128
D LT L+ L L + S +LL+ Q++ L F W T
Sbjct: 25 ADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNNQELILKFLTWANPHQFF--TLRC 82
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW---------- 178
C+ +HIL + A + ++ D + VF+ L + CN
Sbjct: 83 KCITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVK 142
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN-CIDQCWQVYEEMGRIGIC 237
+Y ++ LI ++ + GF P ++S N +L+ ++ I V++EM + +
Sbjct: 143 SYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVS 202
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+NIL FC G++D F +++E++G P++VTYNTLI YCK +++D F L
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R M + + P+L++Y ++NGLC+EG+++E + M RG S D V+YNTLI YCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFT--------CQ------------------------- 384
EG ++ + EM+ +G+ P T C+
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382
Query: 385 --IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+V G+ ++G + A ++ E+ G S S Y+ LI C + A ++LE +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + Y+ ++ C+ V +AL +K +MV + IKP TY +LI FC R+
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L DEML G+ PD LIN YCME D+ KA L +K + D +Y+ +
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562
Query: 563 NMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMIHS 599
N + ++ E ++ L+L + P+++T +I +
Sbjct: 563 NGLNKQ---ARTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 212/426 (49%), Gaps = 15/426 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + L G PS+++ L++ + K +++ + ++M G+CP
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCP 378
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L F + G +++ L+++ + GF P +VTYN LI+ +C G++ DA +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL 438
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+V+Y+T+++G C+ V EA ++ +MV +G+ PD ++Y++LI +C++
Sbjct: 439 EDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ 498
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +E+ L EM+ G+ PD FT ++ Y EG L A+ L E+ GV Y
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTY 558
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES---------------LCKC 463
LI L + R A LL ++ + VPS Y+ L+E+ C
Sbjct: 559 SVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ +A + + M+++N KP + Y +I C G +A SL EM++SG L +
Sbjct: 619 GMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTV 678
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ E VN+ +++ + ++ + E + + +G++ ++++ +
Sbjct: 679 IALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 584 LGFAPN 589
GF PN
Sbjct: 739 DGFLPN 744
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 224/497 (45%), Gaps = 24/497 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ P Y +++ A++ + + K C +V + LI Y
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEK--KGCLPNVVTYNTLID-------GY 250
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+ I + F+ R G +P+++S N ++NGL + + + V EM + G +
Sbjct: 251 CKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDE 310
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L +CK G+ + ++ G P ++TY +LI S CK G +N A
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + P+ TYTTL++G ++G + EA+++ M+ G SP +V+YN LI +C GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M ++ ++L +M G+ PD + ++ G+ + + AL + ++ G+ Y
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS 490
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ R A L + + + G P Y L+ + C + A+ L +EMV++
Sbjct: 491 LIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV--------------- 525
+ P + TY LI R+ EA L+ ++ +P
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI G+CM+ + +A+ + +K D +YN + + GD+ K L K ++ G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670
Query: 586 FAPNNLTCKYMIHSLWK 602
F + +T ++ +L K
Sbjct: 671 FLLHTVTVIALVKTLHK 687
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/535 (29%), Positives = 246/535 (45%), Gaps = 22/535 (4%)
Query: 44 LSNPLYNFL--------PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA-HE 94
LS+P FL P + + I+ I ++K S L + LK +LP L H
Sbjct: 13 LSSPRGGFLCFSTWMTPPTSHCHDPILTTISEAIKV--SPTKPLHSSLKRILPSLTPNHL 70
Query: 95 ISRVLLRCQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
I + L S S S L+FF W+ + + +YC + H L + S A +L + V
Sbjct: 71 IDLINLNPHSLSPPSLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLL-QFV 129
Query: 154 ELVKDCPHSVDVFQDLISC--TEDCNW-------AYVKVGLIRESFKTFRKTLDVGFQPS 204
K + VF ++ T N AY G ++ + FR Q
Sbjct: 130 VSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIP 189
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
SC +L + L+KLN W YEE+ G P+ FN+L H CK +++
Sbjct: 190 FHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFG 249
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+I + G P +V++NTLI+ YCK G L+ F L R M V PD+ TY+ L+NGLCKEG
Sbjct: 250 EIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEG 309
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
++ +A++LF M RGL P+ V++ TLI +C G+ + +M+ G+ PD T
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G K G L A LV+E+ + G+ + Y LI C++ +A + + + ++
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + L+ C+ V +A EM++ IKP +TY +I FC G
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
L+ EM G +P VL+NG C + + A LL + D +YN
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYN 544
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 163/307 (53%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ F + G +P++VS N L+NG K +DQ +++ M + P+ T+++
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSV 300
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + CK G +D N ++ + G P+ VT+ TLI+ +C GR + +Y+ M R+
Sbjct: 301 LINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKG 360
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V PD++TY TL+NGLCK G +REA +L M RGL PD +Y LI CKEG ++ +
Sbjct: 361 VKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESAL 420
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ EM+ GI D ++ G+ +EG+++ A + E+ G+ Y +I
Sbjct: 421 EIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGF 480
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ LL+ + DG+VP + YN L+ LCK + +A +L D M++ + P
Sbjct: 481 CKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDD 540
Query: 486 STYRALI 492
TY L+
Sbjct: 541 ITYNILL 547
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 162/394 (41%), Gaps = 70/394 (17%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
++L V + G + F +E G + ++ L+++Y G +DA +R++ +
Sbjct: 124 SLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRK 183
Query: 304 RNVL-----------------------------------PDLVTYTTLMNGLCKEGKVRE 328
N+ PD+ + LM+ LCKE K+ E
Sbjct: 184 HNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINE 243
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A LF + RGL P +VS+NTLI YCK G + + L MM N ++PD FT +++
Sbjct: 244 AQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLIN 303
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G KEG+L D + L + +C G VP
Sbjct: 304 GLCKEGQL-------------------DDANKLFLEMCDR----------------GLVP 328
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + L+ C + + +M+ + +KP + TY LI C +G EA L+
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM + G+ PD +LI+G C E D+ A + K+ D ++ A+ + F +
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + + + L G P++ T +IH K
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCK 482
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 112/196 (57%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
+++ L G +P +++ N L+NGL K+ + + ++ EM + G+ P+ T+ +L CK
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD++ +++ +EG + D V + LIS +C++G++ +A R M + PD T
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT +++G CK+G V+ +L M G P +V+YN L+ CK+G+M+ + LL M+
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532
Query: 373 GNGIYPDTFTCQIIVQ 388
G+ PD T I+++
Sbjct: 533 NLGVVPDDITYNILLE 548
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 118/291 (40%), Gaps = 18/291 (6%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+Y T+ + LC + EA L L F ++GK S +
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSL------------------LQFVVSRKGKNSASSVFTSVL 146
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G + +++ Y G A+ +++ + I YL L + N
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A + E I GY P + +N LM LCK + +A LL E+ R ++P++ ++ L
Sbjct: 207 SPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTL 266
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I +C G + L M+E+ + PD VLING C E ++ A L +
Sbjct: 267 INGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++ + N G ME+ ++ LR G P+ +T +I+ L K
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 260/554 (46%), Gaps = 46/554 (8%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ VL + + ++L FF +V +P +YC +VHIL+ + L +LV+
Sbjct: 71 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVD 130
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPS 204
L K ++ +L+ + ++ YV+ GL + + F G PS
Sbjct: 131 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 190
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ SCN LLN L+K VY++M R+GI P+ +I+ + FCK+G VD+ GF++
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
K+E G +P++VTY++LI+ Y G + A + + M + V ++VTYT L+ G CK+
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310
Query: 325 KVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K+ EA ++ M L PD +Y LI YC+ GK+ ++ LL EM+ G+ + F C
Sbjct: 311 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GY K G + A ++ + + + Y+ L+ C++ A +L +++ Q
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP-------------------- 483
+G P++ YN L++ LC+ + DAL + M+ R + P
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 484 ---------------SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
S T+ +I C +G+ EA + D+M + G PD R LI+
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GYC +V +A + G ++ E YN++ + + L ++ +L G P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 610
Query: 589 NNLTCKYMIHSLWK 602
N +T +I K
Sbjct: 611 NIVTYGALIDGWCK 624
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 210/456 (46%), Gaps = 32/456 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G I ++ + + L +G + ++ CN L+NG K I + V M + P
Sbjct: 341 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++++N L +C+ G + +K+ +EG +P ++TYNTL+ C+ G +DA ++
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M +R V PD V Y+TL++GL K A L+ ++ RG + +++NT+I CK
Sbjct: 461 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM E++ + +M G PD T + ++ GY K + A + ++R +S S ++Y
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 580
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + R T LL +G G P++ Y L++ CK + A EM +
Sbjct: 581 NSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ----------------- 521
+ ++ ++ +GR EA LM +M++ G PD +
Sbjct: 641 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIAD 700
Query: 522 ---------------ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ + I G C V+ A + K + D +Y + + ++
Sbjct: 701 SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 760
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++ + L+ LR G PN +T +I+ L K
Sbjct: 761 AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 205/475 (43%), Gaps = 69/475 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G E+F K L G +P++++ N LL GL ++ D Q++ M + G+ P
Sbjct: 411 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 470
Query: 239 NTH-----------------------------------TFNILTHVFCKNGDVDKVNGFL 263
+ TFN + CK G + +
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 530
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+K+++ G PD +TY TLI YCK + AF + M R + P + Y +L++GL K
Sbjct: 531 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKS 590
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
++ E L M RGL+P+IV+Y LI +CKEG + ++ S +EM NG+ + C
Sbjct: 591 RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 650
Query: 384 QIIVQGYGKEGRLLSALNLVVE-----------------------LQRFGVSISRD---- 416
+V G + GR+ A NL+++ +Q+ S+
Sbjct: 651 STMVSGLYRLGRIDEA-NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 709
Query: 417 ------IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+Y+ I LC+ + A + G+VP Y L+ +V +A
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L+DEM+ R + P++ TY ALI C A L ++ + G+ P+ LI+GY
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
C +++ A L ++ +Y+A+ N + GD+ + M+L + ++ G
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 187/395 (47%), Gaps = 36/395 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + E+ + F K D+G P ++ L++G K + + Q ++V M R I P+
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIE 578
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L K+ + +V L ++ G P++VTY LI +CK+G L+ AF Y M
Sbjct: 579 MYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI---------------- 345
+ +++ +T+++GL + G++ EA+ L +MV G PD
Sbjct: 639 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI 698
Query: 346 ----------------VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ YN I CK GK+ +++ + G PD FT ++ G
Sbjct: 699 ADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 758
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y G + A L E+ R G+ + Y+ LI LC+ A L ++ Q G P+
Sbjct: 759 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 818
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L++ CK ++ A LKD+M++ I PS+ TY ALI C G ++ L++
Sbjct: 819 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN 878
Query: 510 EMLESGMLPDSQICR--VLINGYCMEKDVNKAEAL 542
+M+++G+ DS++ L+ GY ++ K L
Sbjct: 879 QMIKAGV--DSKLIEYCTLVQGYIRSGEMQKIHKL 911
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 36/397 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G + E+ +K ++G +P+IV+ + L+NG + L ++ V + M G+
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEE----------------------------- 269
N T+ +L +CK +D+ L ++EE
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 270 -------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
G +L N+LI+ YCK+G +++A + M N+ PD +Y TL++G C+
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG EA L +M+ G+ P +++YNTL+ C+ G ++ + + MM G+ PD
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 474
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K A L ++ G + SR ++ +I LC+ + A + +++
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y L++ CK +V A +K M I PS+ Y +LI R
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 594
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
E L+ EM G+ P+ LI+G+C E ++KA
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--- 235
+ K G++ ++F ++ + + G +I+ C+ +++GL +L ID+ + ++M G
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680
Query: 236 -----------------------------ICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ PN +NI CK G VD F +
Sbjct: 681 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+GF PD TY TLI Y G +++AF L M RR ++P++VTY L+NGLCK V
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A +LFH++ +GL P++V+YNTLI YCK G M + L +M+ GI P T +
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 387 VQGYGKEGRLLSALNLVVELQRFGV 411
+ G K G + ++ L+ ++ + GV
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGV 885
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 109/191 (57%), Gaps = 1/191 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + F GF P + L++G +D+ +++ +EM R G+ PN
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK+ +VD+ K+ ++G P++VTYNTLI YCK G ++ AF L M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P +VTY+ L+NGLCK G + + +L ++M+ G+ ++ Y TL+ Y + G+M
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM 905
Query: 362 QESKSLLYEMM 372
Q+ LY+MM
Sbjct: 906 QKIHK-LYDMM 915
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 94/170 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+F+ + L G P+IV+ N L+NGL K +D+ +++ ++ + G+ P
Sbjct: 758 GYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFP 817
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L +CK G++D +K+ EEG P +VTY+ LI+ CK G + + L
Sbjct: 818 NVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLL 877
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
M + V L+ Y TL+ G + G++++ H+L+ M R LS +S+
Sbjct: 878 NQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISH 927
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 252/523 (48%), Gaps = 21/523 (4%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKP-LLPHLGAHEISRVLLRCQSDSV-SALTFFNWV 116
++ ++C + KG H L LKP + +L + +++VLL D + FF WV
Sbjct: 11 TQLAKIVCGIVVKG--HWNSL---LKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWV 65
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED- 175
+++L K + + ++H LA + +F A +L + V+D S V ++ +D
Sbjct: 66 ESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIA--VRDYLSSPSVLNAVVRIHDDP 123
Query: 176 ------CNWA---YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+W Y + +++ + F GF+P + +C LLN L K + W+
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
VY++M R+G+ PN H FN+L H CK+GDV+K L ++E PDL TYNTLIS YC
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
KKG +A + M R V PD+VTY +L+ G C+EG++REA +LF + G +P+ V
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHV 301
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y TLI YC+ ++E+ L M G++P T I++ +EG++ A L+ E+
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
V + LI A C+ +A + +++ + G P + L+ CK V
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
A EM+D PS STY L+ + + L DE+ G+ D + R L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
I C + AE + K D+ Y ++ + + G
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAG 524
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 2/320 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K G+ E+ + G P IV+ N L+ G + + + +++ E+ G PN
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPN 299
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L +C+ D+++ E +E EG P +VTYN+++ C++G++ DA L
Sbjct: 300 HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 359
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R V PD VT TL+N CK G + A ++ +M+ GL PD ++ LI +CK
Sbjct: 360 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLH 419
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ +K L+EM+ G P T +V Y + + + L EL R G+ + +Y
Sbjct: 420 EVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYR 479
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC+ ++ +A + + G +Y L + K A + DEM R
Sbjct: 480 ALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539
Query: 480 NIKPSLSTYRALICCFCGIG 499
+ +L YR + G G
Sbjct: 540 RLMITLKIYRCFSASYAGDG 559
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 157/374 (41%), Gaps = 54/374 (14%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGF---------------DPDLVT--YNTLISSYCKK 288
+ H K+ LE+I + DPD + + L+ Y
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 140
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
DA ++ M P L T L+N L K +++ +MV G+ P+I +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI A CK G +++++ LL EM I+PD FT ++ Y K+G AL + ++R
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GVS Y+ LI C++ R A L I +G P+ Y L++ C+ + + +
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEE 318
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL L++ M + P + TY +++ C G+ +A L++EM E + PD+ C LI
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI- 377
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
N + + GD+ M+++K+ L G P
Sbjct: 378 ----------------------------------NAYCKIGDMGSAMKVKKKMLEAGLKP 403
Query: 589 NNLTCKYMIHSLWK 602
+ T K +IH K
Sbjct: 404 DQFTFKALIHGFCK 417
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 150/517 (29%), Positives = 256/517 (49%), Gaps = 17/517 (3%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D + L +FNW + +L + + C ++++LA + +L V+ +C S+
Sbjct: 86 DPLLVLRYFNWSRRELNVNYSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISL- 144
Query: 165 VFQDLISCT-EDCN---------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+F L C+ + C AYV+ + F++ D ++ S++SCN LL+
Sbjct: 145 IFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSA 204
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L+K N VY+EM R I PN TFN + + CK G ++K ++ ++ GF P+
Sbjct: 205 LVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPN 264
Query: 275 LVTYNTLISSYCKKGRLNDAF---YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+VTYNTLI YCK GR+ + + + M V P+ VT+ L++G CK+ + A +
Sbjct: 265 VVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALK 324
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+F M +GL P +V+YN+L+ C EGK+ E+K LL EM+ + + P+ T ++ GY
Sbjct: 325 VFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYC 384
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K+ L A L + + G++ + ++ L+ C+ + A L + + + G++P+
Sbjct: 385 KKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNAS 444
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
YN L+ C+ + + L +EM R +K TY LI +C +A L+DEM
Sbjct: 445 TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM 504
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L+ G+ P +L+NGYCME ++ A L K+ + + +YN + + G L
Sbjct: 505 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
L L G PN T + + + ME+ F
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTYEIIKEEM---MEKGF 598
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 184/344 (53%), Gaps = 19/344 (5%)
Query: 179 AYVKVGLIRESFKT---FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
Y K+G + + +K ++ ++ P+ V+ N L++G K + +V+EEM G
Sbjct: 274 GYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG 333
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P T+N L + C G +++ L+++ P+++TYN LI+ YCKK L +A
Sbjct: 334 LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAR 393
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L+ + ++ + P+++T+ TL++G CK GK+ EA L M+ +G P+ +YN LI +
Sbjct: 394 ELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGF 453
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C+EGKM+E K+LL EM G+ DT T I++ + ++ A L+ E+ G+ S
Sbjct: 454 CREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSH 513
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ L+ C + AA +L +++ ++G ++ YN L++ C+ + DA L +E
Sbjct: 514 LTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNE 573
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
M+++ + P+ +TY + +EM+E G LPD
Sbjct: 574 MLEKGLIPNRTTYEI----------------IKEEMMEKGFLPD 601
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 213/418 (50%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+FK F + G P I +CN +L+ LKLN ++ W +Y EM R+ I +TFNI+
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 256
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+V CK G + K F+ +E GF P++V+YNT+I Y +G + A + M + +
Sbjct: 257 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 316
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD TY +L++G+CKEG++ EA LF +MV GL P+ V+YNTLI YC +G ++ + S
Sbjct: 317 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 376
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ GI P T ++V EGR+ A +++ E+++ G+ Y+ LI +
Sbjct: 377 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 436
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A L + G P+ Y L+ L + + + +A L ++++D+ + P +
Sbjct: 437 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 496
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ A++ C G A L+ EM + PD L+ G C E V +A LL
Sbjct: 497 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 556
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++ D SYN + + + GD+ ++ L +GF P LT +I L K E
Sbjct: 557 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 614
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 44/402 (10%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ + F L KP +Y I+H + A ++L + VK
Sbjct: 260 CKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM--RVKGIEP 317
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ LIS K G + E+ F K +++G P+ V+ N L++G +
Sbjct: 318 DSYTYGSLIS-------GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++ + +EM + GI P+ T+N+L H G + + + ++++ ++G PD +TYN L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ Y + G AF L+ M + + P VTYT+L+ L + +++EA LF +++ +G+
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 342 SPDI-----------------------------------VSYNTLIFAYCKEGKMQESKS 366
SPD+ V++NTL+ C+EGK++E++
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL EM GI PD + ++ GYG+ G + A + E+ G + + Y+ LI LC
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ A LL+ + G P Y L+E + D++ +
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 183/390 (46%), Gaps = 35/390 (8%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L V C+ D+ ++E+G P + T N ++S + K R+ A+ LY M+
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY------- 355
R + + T+ ++N LCKEGK+++A + M G P++VSYNT+I Y
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 301
Query: 356 ----------------------------CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
CKEG+++E+ L +M+ G+ P+ T ++
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY +G L A + E+ + G+ S Y+ L+ AL + R A +++ + + G +
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 421
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P YN L+ +C + A L +EM+ + I+P+ TY +LI R EA L
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+++L+ G+ PD + +++G+C +V +A LL +K D ++N +
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 541
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+G + + L R G P++++ +I
Sbjct: 542 EGKVEEARMLLDEMKRRGIKPDHISYNTLI 571
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 163/335 (48%), Gaps = 2/335 (0%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ ++ L+ C+ R ++AF + +M + ++P + T +++ K ++ A L+
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M +S + ++N ++ CKEGK+++++ + M G G P+ + I+ GY G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A ++ ++ G+ Y LI +C++ R A+ L +++ + G VP+ YN
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L++ C + A +DEMV + I PS+STY L+ GR GEA ++ EM + G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++PD+ +LINGY + KA L K +Y ++ + + + +
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479
Query: 576 ELQKRFLRLGFAPNNLTCKYMI--HSLWKGMERKF 608
+L ++ L G +P+ + M+ H +ER F
Sbjct: 480 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 213/418 (50%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+FK F + G P I +CN +L+ LKLN ++ W +Y EM R+ I +TFNI+
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMV 234
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+V CK G + K F+ +E GF P++V+YNT+I Y +G + A + M + +
Sbjct: 235 NVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE 294
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD TY +L++G+CKEG++ EA LF +MV GL P+ V+YNTLI YC +G ++ + S
Sbjct: 295 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 354
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ GI P T ++V EGR+ A +++ E+++ G+ Y+ LI +
Sbjct: 355 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 414
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A L + G P+ Y L+ L + + + +A L ++++D+ + P +
Sbjct: 415 CGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 474
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ A++ C G A L+ EM + PD L+ G C E V +A LL
Sbjct: 475 FNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 534
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++ D SYN + + + GD+ ++ L +GF P LT +I L K E
Sbjct: 535 RRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQE 592
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 44/402 (10%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ + F L KP +Y I+H + A ++L + VK
Sbjct: 238 CKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM--RVKGIEP 295
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ LIS K G + E+ F K +++G P+ V+ N L++G +
Sbjct: 296 DSYTYGSLIS-------GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++ + +EM + GI P+ T+N+L H G + + + ++++ ++G PD +TYN L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ Y + G AF L+ M + + P VTYT+L+ L + +++EA LF +++ +G+
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 342 SPDI-----------------------------------VSYNTLIFAYCKEGKMQESKS 366
SPD+ V++NTL+ C+EGK++E++
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL EM GI PD + ++ GYG+ G + A + E+ G + + Y+ LI LC
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ A LL+ + G P Y L+E + D++ +
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 183/390 (46%), Gaps = 35/390 (8%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L V C+ D+ ++E+G P + T N ++S + K R+ A+ LY M+
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY------- 355
R + + T+ ++N LCKEGK+++A + M G P++VSYNT+I Y
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 279
Query: 356 ----------------------------CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
CKEG+++E+ L +M+ G+ P+ T ++
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY +G L A + E+ + G+ S Y+ L+ AL + R A +++ + + G +
Sbjct: 340 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 399
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P YN L+ +C + A L +EM+ + I+P+ TY +LI R EA L
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+++L+ G+ PD + +++G+C +V +A LL +K D ++N +
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCR 519
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+G + + L R G P++++ +I
Sbjct: 520 EGKVEEARMLLDEMKRRGIKPDHISYNTLI 549
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 163/335 (48%), Gaps = 2/335 (0%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ ++ L+ C+ R ++AF + +M + ++P + T +++ K ++ A L+
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M +S + ++N ++ CKEGK+++++ + M G G P+ + I+ GY G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A ++ ++ G+ Y LI +C++ R A+ L +++ + G VP+ YN
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L++ C + A +DEMV + I PS+STY L+ GR GEA ++ EM + G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++PD+ +LINGY + KA L K +Y ++ + + + +
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457
Query: 576 ELQKRFLRLGFAPNNLTCKYMI--HSLWKGMERKF 608
+L ++ L G +P+ + M+ H +ER F
Sbjct: 458 DLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 260/554 (46%), Gaps = 46/554 (8%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ VL + + ++L FF +V +P +YC +VHIL+ + L +LV+
Sbjct: 37 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVD 96
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPS 204
L K ++ +L+ + ++ YV+ GL + + F G PS
Sbjct: 97 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 156
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ SCN LLN L+K VY++M R+GI P+ +I+ + FCK+G VD+ GF++
Sbjct: 157 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 216
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
K+E G +P++VTY++LI+ Y G + A + + M + V ++VTYT L+ G CK+
Sbjct: 217 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 276
Query: 325 KVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K+ EA ++ M L PD +Y LI YC+ GK+ ++ LL EM+ G+ + F C
Sbjct: 277 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 336
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GY K G + A ++ + + + Y+ L+ C++ A +L +++ Q
Sbjct: 337 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP-------------------- 483
+G P++ YN L++ LC+ + DAL + M+ R + P
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456
Query: 484 ---------------SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
S T+ +I C +G+ EA + D+M + G PD R LI+
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 516
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GYC +V +A + G ++ E YN++ + + L ++ +L G P
Sbjct: 517 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTP 576
Query: 589 NNLTCKYMIHSLWK 602
N +T +I K
Sbjct: 577 NIVTYGALIDGWCK 590
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 210/456 (46%), Gaps = 32/456 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G I ++ + + L +G + ++ CN L+NG K I + V M + P
Sbjct: 307 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 366
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++++N L +C+ G + +K+ +EG +P ++TYNTL+ C+ G +DA ++
Sbjct: 367 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 426
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M +R V PD V Y+TL++GL K A L+ ++ RG + +++NT+I CK
Sbjct: 427 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 486
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM E++ + +M G PD T + ++ GY K + A + ++R +S S ++Y
Sbjct: 487 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMY 546
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + R T LL +G G P++ Y L++ CK + A EM +
Sbjct: 547 NSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 606
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ----------------- 521
+ ++ ++ +GR EA LM +M++ G PD +
Sbjct: 607 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIAD 666
Query: 522 ---------------ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ + I G C V+ A + K + D +Y + + ++
Sbjct: 667 SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 726
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++ + L+ LR G PN +T +I+ L K
Sbjct: 727 AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 762
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 36/397 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G + E+ +K ++G +P+IV+ + L+NG + L ++ V + M G+
Sbjct: 201 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 260
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEE----------------------------- 269
N T+ +L +CK +D+ L ++EE
Sbjct: 261 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320
Query: 270 -------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
G +L N+LI+ YCK+G +++A + M N+ PD +Y TL++G C+
Sbjct: 321 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 380
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG EA L +M+ G+ P +++YNTL+ C+ G ++ + + MM G+ PD
Sbjct: 381 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVG 440
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K A L ++ G + SR ++ +I LC+ + A + +++
Sbjct: 441 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y L++ CK +V A +K M I PS+ Y +LI R
Sbjct: 501 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 560
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
E L+ EM G+ P+ LI+G+C E ++KA
Sbjct: 561 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 188/451 (41%), Gaps = 105/451 (23%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G E+F K L G +P++++ N LL GL ++ D Q++ M + G+ P
Sbjct: 377 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAP 436
Query: 239 NTH-----------------------------------TFNILTHVFCKNGDVDKVNGFL 263
+ TFN + CK G + +
Sbjct: 437 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 496
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+K+++ G PD +TY TLI YCK + AF + M R + P + Y +L++GL K
Sbjct: 497 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKS 556
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
++ E L M RGL+P+IV+Y LI +CKEG + ++ S +EM NG+ + C
Sbjct: 557 RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 616
Query: 384 QIIVQGYGKEGRLLSALNLVVE-----------------------LQRFGVSISRD---- 416
+V G + GR+ A NL+++ +Q+ S+
Sbjct: 617 STMVSGLYRLGRIDEA-NLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF 675
Query: 417 ------IYDYLIVALCQ-----DNRPF------------------------------AAT 435
+Y+ I LC+ D R F A
Sbjct: 676 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 735
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
L + + + G VP++ YN L+ LCK ++V A L ++ + + P++ TY LI +
Sbjct: 736 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 795
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
C IG A L D+M+E G+ P Q C +L
Sbjct: 796 CKIGNMDAAFKLKDKMIEEGISPSIQ-CNLL 825
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 282/624 (45%), Gaps = 60/624 (9%)
Query: 24 FSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDL 83
FS S S + D+ +P + +T+ ++I ++I L++ + L+ L
Sbjct: 25 FSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVI--KLRRAEP----LRRSL 78
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
KP + VL++ + D L FF+W ++ + S C+++H+ +
Sbjct: 79 KPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLES--LCIVIHLAVASKDLK 136
Query: 144 FAMKMLCELVELVK-DCPHSVDVFQDLISCTEDCNWA------------YVKVGLIRESF 190
A ++ E K + S F DL+ T +W V GL+RE+
Sbjct: 137 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYK-DWGSDPRVFDVFFQVLVDFGLLREAR 195
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ--VYEEMGRIGICPNTHTFNILTH 248
+ F K L+ G S+ SCN L L K +C V+ E +G+C N ++NI+ H
Sbjct: 196 RVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN--- 305
C+ G + + + L +E +G+ PD+++Y+T+++ YC+ G L+ + L +M R+
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 306 --------------------------------VLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+LPD V YTTL++G CK G +R A + F
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ M R ++PD+++Y +I +C+ G M E+ L +EM G+ PD+ T ++ GY K
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + A + + + G S + Y LI LC++ +A LL + + G P++ Y
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK ++ +A+ L E + TY L+ +C G +A ++ EML
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ P VL+NG+C+ + E LL + K + ++N++ + +L
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+ K G P+ T + ++
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLV 638
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 229/477 (48%), Gaps = 9/477 (1%)
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
++Y +++H + + A +L L+EL P D+IS + N Y + G +
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTP-------DVISYSTVVN-GYCRFGEL 297
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ +K G +P+ ++ L ++ + + + + EM R GI P+T + L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
FCK GD+ + F ++ PD++TY +IS +C+ G + +A L+ M+ + +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD VT+T L+NG CK G +++A ++ + M+ G SP++V+Y TLI CKEG + +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL+EM G+ P+ FT IV G K G + A+ LV E + G++ Y L+ A C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A +L+ + G P++ +N LM C + D L + M+ + I P+ +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
T+ +L+ +C A ++ +M G+ PD + L+ G+C +++ +A L
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K +Y+ + F + + E+ + R G A + + + +KG
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 181/418 (43%), Gaps = 53/418 (12%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P + I+ L+C K ++ + + +LP + + + C+ + A +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY-TTLIDGFCKRGDIRAASK 372
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK----MLCELVELVKDCPHSVDVFQD 168
F + + +I P Y I+ A K M C+ +E P SV F +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-----PDSV-TFTE 426
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+ Y K G ++++F+ + G P++V+ L++GL K +D ++
Sbjct: 427 LIN-------GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 229 EEMGRIGICPNTHTFN-----------------------------------ILTHVFCKN 253
EM +IG+ PN T+N L +CK+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G++DK L+++ +G P +VT+N L++ +C G L D L M + + P+ T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+L+ C ++ A ++ M RG+ PD +Y L+ +CK M+E+ L EM G
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G T ++++G+ K + L A + +++R G++ ++I+D+ + RP
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 258/563 (45%), Gaps = 47/563 (8%)
Query: 56 QNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNW 115
++ ++V IC+++ KG + LL+ + +L H++ L + F W
Sbjct: 8 RSETQLVQNICATVIKGGWN-NLLRPKICSILTASTLHQVLYQLSLHSQGPCLSWALFKW 66
Query: 116 VKNDL-EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
+++ + K + + ++HIL A +L ++ +D + V L+ +
Sbjct: 67 IESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIA--YRDFLSTQSVLSALVRLHD 124
Query: 175 DCN-------W---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
D + W Y + +E+ + F + GF+P + +C LLN L K D
Sbjct: 125 DPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMV 184
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W+VY++M RIG+ N H +N+L H CK+GDV+K + L ++E + PDL TYNTLIS
Sbjct: 185 WKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISL 244
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF----------- 333
YCKKG +A + M R + PD+VTY +L++G CKEG++REA +LF
Sbjct: 245 YCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHV 304
Query: 334 ----------------------HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
M +GL P +V+YN+++ C+ G+++++ LL EM
Sbjct: 305 TYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEM 364
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
I PD TC ++ Y K G + SAL + + G+ + + Y LI C+
Sbjct: 365 SEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREM 424
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A LL + G+ PS Y+ L++ C + L L DE V + + S YRAL
Sbjct: 425 DGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRAL 484
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I FC + A + M E G L DS I L Y N A LL K+
Sbjct: 485 IRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRL 544
Query: 552 IYDTESYNAVFNMFAEDGDLSKL 574
+ + Y A+ +A D + L
Sbjct: 545 MITLKIYRALNASYAGDNSILSL 567
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 171/369 (46%), Gaps = 19/369 (5%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGF---------------DPDLVT--YNTLISSYCKK 288
+ H+ K + LEKI F DPD+ + ++ L+ Y
Sbjct: 84 MIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANT 143
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+A ++ M P L T L+N L K+ +++ +M G+ +I Y
Sbjct: 144 KMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVY 203
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI A CK G ++++ +LL EM ++PD FT ++ Y K+G AL++ ++R
Sbjct: 204 NVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMER 263
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ Y+ LI C++ R A L + I +D P+ Y L++ C+ + +
Sbjct: 264 EGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI-RDA-TPNHVTYTTLIDGYCRLNDLDQ 321
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL L++EM + + P++ TY +++ C IGR +A L++EM E + PD+ C LIN
Sbjct: 322 ALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLIN 381
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
YC D+ A + + D +Y A+ + F + ++ EL L GF+P
Sbjct: 382 AYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSP 441
Query: 589 NNLTCKYMI 597
+ T +++
Sbjct: 442 SYCTYSWLV 450
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 216/427 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY ++ E+ + F + GF P+I +CN +L+ LKLN W +Y EM R+ I
Sbjct: 155 AYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRS 214
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TFNI+ +V CK G + K F+ +E G P++VTYNT+I +C +G+ A ++
Sbjct: 215 SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIF 274
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + PD TY + ++GLCKEG++ EA L +M+ GL P+ V+YN LI YC +
Sbjct: 275 QTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNK 334
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ + EM+ GI T + + EGR+ A N++ E++ G+ +
Sbjct: 335 GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTH 394
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ A LL+ + G P+L Y L+ L K + + +A L ++
Sbjct: 395 NILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P + + ALI C G A L+ EM +LPD L+ GYC E V +
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEE 514
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A LL ++ D SYN + + +++ GD+ ++ + GF P LT +I
Sbjct: 515 ARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQ 574
Query: 599 SLWKGME 605
L K E
Sbjct: 575 GLCKNQE 581
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 181/373 (48%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G +P++V+ N +++G + +++ M G+ P+ +T+N CK G +++
Sbjct: 245 LGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEE 304
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+G + K+ E G P+ VTYN LI YC KG L+ A+ M + ++ LVTY ++
Sbjct: 305 ASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIH 364
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
L EG++ +A + M +G+ PD V++N LI YC+ G + + LL EM+G GI P
Sbjct: 365 ALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
T ++ GK R+ A L ++Q+ G+ +++ LI C + A LL
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + +P YN LM+ C+ V +A L DEM R IKP +Y LI +
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G +A + DEM+ +G P LI G C ++ AE LL K D +Y
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604
Query: 559 NAVFNMFAEDGDL 571
++ DL
Sbjct: 605 LSIIEAMETVDDL 617
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + F+ D G +P + N ++GL K +++ + +M G+ PN T+
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +C GD+DK + +++ +G LVTYN I + +GR+ DA + + M
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++PD VT+ L+NG C+ G + A L MV +G+ P +V+Y +LI+ K +M+E
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L ++ G+ PD ++ G+ G + A L+ E+ V Y+ L+
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C++ + A LL+ + + G P YN L+ K + DA ++DEM+ P
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
++ TY ALI C A L+ EM+ G+ PD
Sbjct: 565 TILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 176/360 (48%), Gaps = 14/360 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVF 166
A F +K D ++P Y + L + A ++C+++E LV P++V +
Sbjct: 270 ARVIFQTMK-DKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV---PNAV-TY 324
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI Y G + +++ + + G S+V+ N ++ L +
Sbjct: 325 NALID-------GYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADN 377
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ +EM G+ P+ T NIL + +C+ GD + G L+++ +G P LVTY +LI
Sbjct: 378 MIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLG 437
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K+ R+ +A L+ + + +LPD++ + L++G C G + A QL M + + PD +
Sbjct: 438 KRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEI 497
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YNTL+ YC+EGK++E++ LL EM GI PD + ++ GY K G + A + E+
Sbjct: 498 TYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G + Y+ LI LC++ A LL+ + G P Y ++E++ D +
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDL 617
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 159/334 (47%), Gaps = 2/334 (0%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
++ L+ +YC+ + N+A + ++ + +P++ T +++ K + + A L+ M
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ + ++N +I CKEGK++++K + M G+ P+ T I+ G+ G+
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A + ++ G+ Y+ I LC++ R A+ L+ ++ + G VP+ YN L+
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ C + A +DEM+ + I SL TY I GR G+A +++ EM E GM+
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD+ +LINGYC D +A LL K +Y ++ + + + + L
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448
Query: 578 QKRFLRLGFAPNNLTCKYMI--HSLWKGMERKFQ 609
+ + G P+ + +I H ++R FQ
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQ 482
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
I+D L+ A C+ +P A I + G+VP++E N+++ K + A +L EM
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
NI+ SL T+ +I C G+ +A + M G+ P+ +I+G+C+
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A + K D +YN+ + ++G L + L + L G PN +T +
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNAL 327
Query: 597 I 597
I
Sbjct: 328 I 328
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 280/590 (47%), Gaps = 49/590 (8%)
Query: 16 ISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSH 75
I +L F S+S+A++S+ I S K + L+N +P +V
Sbjct: 23 IFRLPFVSYSNANNSFQYLDI-GSLRKIIQQDLWN------DPKIVV------------- 62
Query: 76 LTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHI 135
L + L P+ +S++LL + D AL FF W + + + T+ +YC+IVH+
Sbjct: 63 --LFDSALAPIW-------VSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHL 113
Query: 136 LAWNNKFSFAMKMLCELVELVK-DCPHSV-DVFQDLISCTEDCNWA----------YVKV 183
+ ++ A + E++ + D V ++F L S C +V++
Sbjct: 114 VFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVEL 173
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ E+ + F + + P SCNFLL+ L K + + +M GI P+ T+
Sbjct: 174 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 233
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ CK GD++ ++ E G PD+VTYN+LI Y K G L + L+ M
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+PD++TY L+N CK K+ A + F M + GL P++V+Y+TLI A+CKEG MQ
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 353
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL +M G+ P+ FT ++ K G L A L+ ++ + GV ++ Y L+
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 413
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R A + + +DG P+ ++Y L+ K + + DA+ + +M + NIKP
Sbjct: 414 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 473
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L Y ++I C + E +++EM G+ + I +I+ Y K+ L
Sbjct: 474 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF---KAGKSSDAL 530
Query: 544 GFFAKKFQIYDTE----SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
FF ++ Q E +Y + + E G + ++ R L LG PN
Sbjct: 531 NFF-QEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPN 579
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 198/404 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + S + F + ++G P +V+ N L++G K+ +++ ++ EM +G P+
Sbjct: 242 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 301
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + +CK + + + +++ G P++VTY+TLI ++CK+G + A L M
Sbjct: 302 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM 361
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R +LP+ TYT+L++ CK G + EA +L + M+ G+ +IV+Y L+ CK G+M
Sbjct: 362 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 421
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ + M+ +GI P+ +V GY K R+ A+ ++ ++ + +Y +
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 481
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C + +LE + G + I ++++ K +DAL EM D +
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 541
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ ++ TY LI C G AV ML G+ P+ + LI+G C + A+
Sbjct: 542 EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKK 601
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
L + D ++ A+ + + G+L + + L R L
Sbjct: 602 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 645
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 203/444 (45%), Gaps = 35/444 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + E F + DVG P I++ N L+N K + + ++ + EM G+ P
Sbjct: 274 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 333
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L FCK G + L + G P+ TY +LI + CK G L +A+ L
Sbjct: 334 NVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 393
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS---------------- 342
M + V ++VTYT L++GLCK G++ EA ++F M+ G+S
Sbjct: 394 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 453
Query: 343 -------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
PD++ Y ++I+ +C + K++E+K +L EM GI +
Sbjct: 454 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 513
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ Y K G+ ALN E+Q GV + Y LI LC+ A R+
Sbjct: 514 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P++ +Y L++ LC + + A L DEM R + P ++ + ALI G E
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ L+ M E + D + L++G+ ++++A +K + + +
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693
Query: 564 MFAEDGDLSKLMELQKRFLRLGFA 587
+ + G L + +EL+ R+ ++
Sbjct: 694 EYYKRGQLDEAIELKNEMERMAYS 717
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 9/295 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +VH + AMK+L ++ E ++ DLI W +
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTE--------CNIKPDLI-LYGSIIWGHC 486
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ E+ + G + V +++ K ++EM +G+
Sbjct: 487 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 546
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L C+ G V+ + ++ G P++ Y +LI C + A L+ M
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEM 606
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + PD+ +T L++G K G ++EA L RM + D+ Y +L+ + + G++
Sbjct: 607 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 666
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+++ EM+ GI P+ C +++ Y K G+L A+ L E++R S D
Sbjct: 667 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFD 721
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 119/292 (40%), Gaps = 35/292 (11%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+ L + + G + EA++ F RM + P S N L+ K G Q + +M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+G GI P FT +++ KEG L ++ L V+++ G+S
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLS------------------- 262
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
P + YN L++ K S+ + L +EM D P + TY L
Sbjct: 263 ----------------PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGL 306
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C+C + A EM +G+ P+ LI+ +C E + A LL +
Sbjct: 307 INCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGL 366
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +Y ++ + + G+L++ +L L+ G N +T ++ L K
Sbjct: 367 LPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 418
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/523 (29%), Positives = 251/523 (47%), Gaps = 21/523 (4%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKP-LLPHLGAHEISRVLLRCQSDSV-SALTFFNWV 116
++ ++C + KG H L LKP + +L + +++VLL D + FF WV
Sbjct: 11 TQLAKIVCGIVVKG--HWNSL---LKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWV 65
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED- 175
+++L + + ++H LA + +F A +L + V+D S V ++ +D
Sbjct: 66 ESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIA--VRDYLSSPSVLNAVVRIHDDP 123
Query: 176 ------CNWA---YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+W Y + +++ + F GF+P + +C LLN L K + W+
Sbjct: 124 DSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWK 183
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
VY++M R+G+ PN H FN+L H CK+GDV+K L ++E PDL TYNTLIS YC
Sbjct: 184 VYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
KKG +A + M R V PD+VTY +L+ G C+EG++REA +LF + G +P+ V
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHV 301
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y TLI YC+ ++E+ L M G++P T I++ +EG++ A L+ E+
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
V + LI A C+ +A + +++ + G P + L+ CK V
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
A EM+D PS STY L+ + + L DE+ G+ D + R L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
I C + AE + K D+ Y ++ + + G
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAG 524
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 2/320 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K G+ E+ + G P IV+ N L+ G + + + +++ E+ G PN
Sbjct: 242 YCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GATPN 299
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L +C+ D+++ E +E EG P +VTYN+++ C++G++ DA L
Sbjct: 300 HVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 359
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R V PD VT TL+N CK G + A ++ +M+ GL PD ++ LI +CK
Sbjct: 360 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLH 419
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ +K L+EM+ G P T +V Y + + + L EL R G+ + +Y
Sbjct: 420 EVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYR 479
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC+ ++ +A + + G +Y L + K A + DEM R
Sbjct: 480 ALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKR 539
Query: 480 NIKPSLSTYRALICCFCGIG 499
+ +L YR + G G
Sbjct: 540 RLMITLKIYRCFSASYAGDG 559
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 158/374 (42%), Gaps = 54/374 (14%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGF---------------DPDLVT--YNTLISSYCKK 288
+ H K+ LE+I + DPD + + L+ Y
Sbjct: 81 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 140
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
DA ++ M P L T L+N L K +++ +MV G+ P+I +
Sbjct: 141 RMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIF 200
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI A CK G +++++ LL EM I+PD FT ++ Y K+G AL + ++R
Sbjct: 201 NVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMER 260
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GVS Y+ LI C++ R A L I +G P+ Y L++ C+ + + +
Sbjct: 261 GGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEE 318
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL L++ M + P + TY +++ C G+ +A L++EM E + PD+ C LIN
Sbjct: 319 ALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLIN 378
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
YC + GD+ M+++K+ L G P
Sbjct: 379 AYC-----------------------------------KIGDMGSAMKVKKKMLEAGLKP 403
Query: 589 NNLTCKYMIHSLWK 602
+ T K +IH K
Sbjct: 404 DQFTFKALIHGFCK 417
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/609 (26%), Positives = 280/609 (45%), Gaps = 66/609 (10%)
Query: 47 PLYNFLPETQNPN----KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRC 102
P ++ P +NP+ +V + ++LK+ HL + LKP + VL+
Sbjct: 34 PFPDYSP--RNPSISDTDLVRRVTTTLKR--RHLEPFRRVLKPYESRFKPSHLIWVLINL 89
Query: 103 QSDSVSALTFFNWVKND--LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK-DC 159
++D L FNW K+ + PT + C++VH+ +N A +++ E K D
Sbjct: 90 KNDYPLVLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDV 149
Query: 160 PHSVDVFQDLISCTEDCNWA--------YVKV----GLIRESFKTFRKTLDVGFQPSIVS 207
S +F +++ T +W Y +V G + E+ K F K L G S+ S
Sbjct: 150 SKSFHLFTEMLIYTYK-DWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDS 208
Query: 208 CNFLLNGLLKLNC----IDQCWQVYEEMGRIGICPNTHTFNILTHVF------------- 250
CN L+ +L+C I +V+EE +G+C NT + NI+ H
Sbjct: 209 CNLFLS---RLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLL 265
Query: 251 ----------------------CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
C+ G++DKV +++++ +G PD YN +I CK
Sbjct: 266 VQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKN 325
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + +A L R M + V PD V YTT+++G CK G V A +LF M + + PDIV+Y
Sbjct: 326 GEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTY 385
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
++I CK GKM E++ + EM+ G+ PD T ++ GY K G + A ++ ++ +
Sbjct: 386 TSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ 445
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G++ + Y L LC++ A LL + + G P++ YN ++ LCK ++
Sbjct: 446 KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQ 505
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
+ L +EM P TY L+ +C +G +A L+ ML + P VL+N
Sbjct: 506 TVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
G+CM + E L+ + +K + + ++N++ + ++ E+ K G P
Sbjct: 566 GFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMP 625
Query: 589 NNLTCKYMI 597
++ T +I
Sbjct: 626 DSNTYNILI 634
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 228/427 (53%), Gaps = 2/427 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G +RE+ + D G P +VS +++G ++ +D+ ++ +E+ G+ P+ +
Sbjct: 254 QLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEY 313
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N + + CKNG+V + L + + G PD V Y T+IS +CK G ++ A L+ M
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ ++PD+VTYT++++G+CK GK+ EA ++F+ M+ +GL PD V+Y LI YCK G+M
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEM 433
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ S+ +M+ G+ P+ T + G K G + A L+ E+ R G+ + Y+ +
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ L+E + G+ P Y LM++ CK +A A L M+++ +
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+L T+ L+ FC G + L++ MLE G++P++ L+ YC++ ++
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ + + D+ +YN + + ++ + L K + G++ T +I +
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673
Query: 602 KGMERKF 608
K +KF
Sbjct: 674 K--RKKF 678
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 195/401 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + R G P V +++G KL + ++++EM R I P+
Sbjct: 324 KNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIV 383
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + H CK+G + + ++ +G +PD VTY LI YCK G + +AF ++ M
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + P++VTYT L +GLCK G++ A++L H M +GL P++ +YNT++ CK G +
Sbjct: 444 VQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNI 503
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ EM G YPDT T ++ Y K G + A L+ + + + ++ L
Sbjct: 504 EQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVL 563
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C L+E + + G +P+ +N LM+ C +++ + M DR +
Sbjct: 564 MNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGV 623
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L EM+E G + LI G+ K +A
Sbjct: 624 MPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARK 683
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L K + + + Y+ ++ E+G+ +EL F+
Sbjct: 684 LFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFM 724
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 186/377 (49%), Gaps = 12/377 (3%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+I P Y ++H + + K A +M E+ LVK + LI Y
Sbjct: 377 KIVPDIVTYTSVIHGICKSGKMVEAREMFNEM--LVKGLEPDEVTYTALID-------GY 427
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G ++E+F + + G P++V+ L +GL K ID ++ EM R G+ PN
Sbjct: 428 CKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNV 487
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+N + + CK G++++ +E+++ GF PD +TY TL+ +YCK G + A L RI
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P LVT+ LMNG C G + + +L M+ +G+ P+ ++N+L+ YC +
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+ + + M G+ PD+ T I+++G+ K + A L E+ G S++ YD
Sbjct: 608 MRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDA 667
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI + + A L E + + G V +IY+ ++ + + L L DE +
Sbjct: 668 LIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMT-- 725
Query: 481 IKPSLSTYRALICCFCG 497
+ S + + IC F G
Sbjct: 726 -ELSGTIFVVYICFFIG 741
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 181/364 (49%), Gaps = 1/364 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF D + T + + K+G + + K F + P IV+ +++G+ K + +
Sbjct: 343 VFPDNVVYTTVIS-GFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+++ EM G+ P+ T+ L +CK G++ + ++ ++G P++VTY L
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK G ++ A L M R+ + P++ TY T++NGLCK G + + +L M G PD
Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
++Y TL+ AYCK G+M ++ LL M+ + P T +++ G+ G L L+
Sbjct: 522 TITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIE 581
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ G+ + ++ L+ C N A T + + + G +P YN L++ CK
Sbjct: 582 WMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKAR 641
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ +A L EMV++ + +TY ALI F + EA L +EM + G++ + I
Sbjct: 642 NMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYD 701
Query: 525 VLIN 528
+ ++
Sbjct: 702 IFVD 705
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 258/554 (46%), Gaps = 46/554 (8%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ VL + + ++L FF +V +P +YC +VHIL+ + L +LV+
Sbjct: 71 VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVD 130
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPS 204
L K ++ +L+ + ++ YV+ GL + + F G PS
Sbjct: 131 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 190
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ SCN LLN L+K VY++M R+GI P+ +I+ + FCK+G VD+ GF++
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
K+E G +P++VTY++LI+ Y G + A + + M + V ++VTYT L+ G CK+
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310
Query: 325 KVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K+ EA ++ M L PD +Y LI YC+ GK+ ++ LL EM+ G+ + F C
Sbjct: 311 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GY K G + A ++ + + + Y+ L+ C++ A +L +++ Q
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP-------------------- 483
+G P++ YN L++ LC+ + DAL + M+ + P
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 484 ---------------SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
S T+ +I C +G+ EA + D+M + G PD R LI+
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GYC +V +A + G ++ E YN++ + + L + +L G P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610
Query: 589 NNLTCKYMIHSLWK 602
N +T +I K
Sbjct: 611 NIVTYGALIDGWCK 624
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 209/456 (45%), Gaps = 32/456 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G I ++ + + L +G + ++ CN L+NG K I + V M + P
Sbjct: 341 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++++N L +C+ G + +K+ +EG +P ++TYNTL+ C+ G +DA ++
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M + V PD V Y+TL++GL K A L+ ++ RG + +++NT+I CK
Sbjct: 461 HLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM E++ + +M G PD T + ++ GY K + A + ++R +S S ++Y
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMY 580
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + R T LL +G G P++ Y L++ CK + A EM +
Sbjct: 581 NSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTE 640
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ----------------- 521
+ ++ ++ +GR EA LM +M++ G PD +
Sbjct: 641 NGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIAD 700
Query: 522 ---------------ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ + I G C V+ A + K + D +Y + + ++
Sbjct: 701 SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYS 760
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++ + L+ LR G PN +T +I+ L K
Sbjct: 761 AAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCK 796
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 208/462 (45%), Gaps = 44/462 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G E+F K L G +P++++ N LL GL ++ D Q++ M + G+ P
Sbjct: 411 GYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAP 470
Query: 239 NTH-----------------------------------TFNILTHVFCKNGDVDKVNGFL 263
+ TFN + CK G + +
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 530
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+K+++ G PD +TY TLI YCK + AF + M R + P + Y +L++GL K
Sbjct: 531 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKS 590
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
++ E L M RGL+P+IV+Y LI +CKEG + ++ S +EM NG+ + C
Sbjct: 591 RRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIIC 650
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+V G + GR+ A L+ ++ G + + L D R A + + + +
Sbjct: 651 STMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECF------LKSDIRYAAIQKIADSLDE 704
Query: 444 DG---YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+P+ +YN + LCK V DA + + P TY LI + G
Sbjct: 705 SCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGN 764
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L DEML G++P+ LING C ++V++A+ L +K + +YN
Sbjct: 765 VDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNT 824
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + + G++ +L+ + + G +P+ +T +I+ L K
Sbjct: 825 LIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 190/398 (47%), Gaps = 39/398 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + E+ + F K D+G P ++ L++G K + + Q ++V M R I P+
Sbjct: 519 KMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIE 578
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L K+ + + L ++ G P++VTY LI +CK+G L+ AF Y M
Sbjct: 579 MYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI---------------- 345
+ +++ +T+++GL + G++ EA+ L +MV G PD
Sbjct: 639 TENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKI 698
Query: 346 ----------------VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ YN I CK GK+ +++ + G PD FT ++ G
Sbjct: 699 ADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHG 758
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y G + A L E+ R G+ + Y+ LI LC+ A L ++ Q G P+
Sbjct: 759 YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPN 818
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L++ CK ++ A LKD+M++ I PS+ TY ALI C G ++ L++
Sbjct: 819 VVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLN 878
Query: 510 EMLESGMLPDSQI---CRVLINGYCME--KDVNKAEAL 542
+M+++G+ DS++ C ++ G+ +++K EAL
Sbjct: 879 QMIKAGV--DSKLIEYCTLVQGGFKTSNYNEMSKPEAL 914
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 36/397 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G + E+ +K ++G +P+IV+ + L+NG + L ++ V + M G+
Sbjct: 235 AFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR 294
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEE----------------------------- 269
N T+ +L +CK +D+ L ++EE
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 270 -------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
G +L N+LI+ YCK+G +++A + M N+ PD +Y TL++G C+
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCR 414
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG EA L +M+ G+ P +++YNTL+ C+ G ++ + + MM G+ PD
Sbjct: 415 EGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVG 474
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K A L ++ G + SR ++ +I LC+ + A + +++
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y L++ CK +V A +K M I PS+ Y +LI R
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLV 594
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
E L+ EM G+ P+ LI+G+C E ++KA
Sbjct: 595 EXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 32/265 (12%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--- 235
+ K G++ ++F ++ + + G +I+ C+ +++GL +L ID+ + ++M G
Sbjct: 621 GWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 680
Query: 236 -----------------------------ICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ PN +NI CK G VD F +
Sbjct: 681 DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSML 740
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+GF PD TY TLI Y G +++AF L M RR ++P++VTY L+NGLCK V
Sbjct: 741 SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENV 800
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A +LFH++ +GL P++V+YNTLI YCK G M + L +M+ GI P T +
Sbjct: 801 DRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSAL 860
Query: 387 VQGYGKEGRLLSALNLVVELQRFGV 411
+ G K G + ++ L+ ++ + GV
Sbjct: 861 INGLCKHGDIERSMKLLNQMIKAGV 885
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 246/518 (47%), Gaps = 23/518 (4%)
Query: 86 LLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFA 145
LL HL E L+ C +F W + + +C ++H+LA ++
Sbjct: 76 LLQHLFNSEAQPDLILC---------YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYN-- 124
Query: 146 MKMLCELVELVKDCPHS-VDVFQDL-ISCTEDCN---------WAYVKVGLIRESFKTFR 194
K+ L K+ +S +F L + + C WAYVK G + + + F
Sbjct: 125 -KIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFD 183
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ D GF+ S +SCN +L L+K I VY+EM R I N TF+++ + CK G
Sbjct: 184 RAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG 243
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
K +E ++ GF P ++TYNT+I YCK G++ A L + M + + P+ +T+
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++G C++ V A ++F M +GL P++V+YN+LI C GK+ E+ L +M G
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ P+ T ++ G+ K+ L A ++ ++ + G++ + ++ LI A + R A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L + G P++ YN L+ C+ +V +A L EM +K L TY L+
Sbjct: 424 FLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDA 483
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G + +AV L+DEM E G+ P LI+GY E + A + KK + +
Sbjct: 484 LCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRAN 543
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+YN + F G L + L L G PN T
Sbjct: 544 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 180/341 (52%), Gaps = 16/341 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + ++ ++ + P+ ++ N L++G + + +V+EEM R G+ P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + C NG +D+ G +K+ G P++VTYN LI+ +CKK L +A +
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ +R + P+++T+ TL++ K G++ +A L M+ G+ P++ +YN LI +C+E
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++E++ L EM GNG+ D T I+V K+G A+ L+ E+ G++ S Y
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI ++ AA ++ + + G ++ YN L++ C + +A L +EM++
Sbjct: 513 NALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLE 572
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ + P+ +TY L DEM+E G +PD
Sbjct: 573 KGLIPNRTTYDI----------------LRDEMMEKGFIPD 597
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 159/298 (53%), Gaps = 16/298 (5%)
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
K F + G QP++V+ N L+NGL +D+ + ++M +G+ PN T+N L + F
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK + + L+ I + G P+++T+NTLI +Y K GR++DAF L +M V P++
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
TY L+ G C+EG V+EA +L M GL D+V+YN L+ A CK+G+ +++ LL E
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G+ P T ++ GY +EG +ALN+ +++ G + Y+ LI C +
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A LL + + G +P+ Y+ +L+DEM+++ P + +
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYD----------------ILRDEMMEKGFIPDIDGH 601
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 115/230 (50%), Gaps = 12/230 (5%)
Query: 147 KMLCELVELVKDCPH-----SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
KML E E++ D +V F LI AY K G + ++F LD G
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLID-------AYGKAGRMDDAFLLRSMMLDTGV 435
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P++ + N L+ G + + + ++ +EM G+ + T+NIL CK G+ K
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L+++ E G +P +TYN LI Y ++G A + +M ++ ++VTY L+ G C
Sbjct: 496 LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFC 555
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+GK+ EA++L + M+ +GL P+ +Y+ L ++G + + LY +
Sbjct: 556 NKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNV 605
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%)
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L++AY K G+M + G +C ++ KEGR+ ++ E+ R
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ ++ +D +I LC+ + A ++E + G+ PS+ YN +++ CK + A
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EMV + I P+ T+ LI FC A + +EM G+ P+ LING
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C +++A L + + +YNA+ N F + L + E+ + G APN
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 591 LTCKYMIHSLWKG 603
+T +I + K
Sbjct: 405 ITFNTLIDAYGKA 417
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 106/224 (47%)
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
++ ++V Y K G + AL +G +S + ++V+L ++ R S+
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + ++ ++ ++ LCK A + ++M PS+ TY +I +C
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ +A +L+ EM+ + P+ +LI+G+C +++V A+ + ++ + +Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N++ N +G L + + LQ + +G PN +T +I+ K
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 147/569 (25%), Positives = 259/569 (45%), Gaps = 54/569 (9%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
L+ LKP + VL++ + D L FF+W ++ + S C+++H+
Sbjct: 517 LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLES--LCIVIHLAVA 574
Query: 139 NNKFSFAMKMLCELVELVK-DCPHSVDVFQDLISCTEDCNWA------------YVKVGL 185
+ A ++ E K + S F DL+ T +W V GL
Sbjct: 575 SKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYK-DWGSDPRVFDVFFQVLVDFGL 633
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ--VYEEMGRIGICPNTHTF 243
+RE+ + F K L+ G S+ SCN L L K +C V+ E +G+C N ++
Sbjct: 634 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASY 692
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ H C+ G + + + L +E +G+ PD+++Y+T+++ YC+ G L+ + L +M R
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752
Query: 304 RN-----------------------------------VLPDLVTYTTLMNGLCKEGKVRE 328
+ +LPD V YTTL++G CK G +R
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F+ M R ++PD+++Y +I +C+ G M E+ L +EM G+ PD+ T ++
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY K G + A + + + G S + Y LI LC++ +A LL + + G P
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ YN ++ LCK ++ +A+ L E + TY L+ +C G +A ++
Sbjct: 933 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EML G+ P VL+NG+C+ + E LL + K + ++N++ +
Sbjct: 993 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L + K G P+ T + ++
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLV 1081
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 229/477 (48%), Gaps = 9/477 (1%)
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
++Y +++H + + A +L L+EL P D+IS + N Y + G +
Sbjct: 690 ASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTP-------DVISYSTVVN-GYCRFGEL 740
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ +K G +P+ ++ L ++ + + + + EM R GI P+T + L
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
FCK GD+ + F ++ PD++TY +IS +C+ G + +A L+ M+ + +
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD VT+T L+NG CK G +++A ++ + M+ G SP++V+Y TLI CKEG + +
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL+EM G+ P+ FT IV G K G + A+ LV E + G++ Y L+ A C
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A +L+ + G P++ +N LM C + D L + M+ + I P+ +
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
T+ +L+ +C A ++ +M G+ PD + L+ G+C +++ +A L
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K +Y+ + F + + E+ + R G A + + + +KG
Sbjct: 1101 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 1157
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 163/369 (44%), Gaps = 52/369 (14%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK----MLCELVELVK 157
C+ + A + F + + +I P Y I+ A K M C+ +E
Sbjct: 805 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE--- 861
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
P SV F +LI+ Y K G ++++F+ + G P++V+ L++GL K
Sbjct: 862 --PDSV-TFTELIN-------GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFN--------------------------------- 244
+D ++ EM +IG+ PN T+N
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 245 --ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L +CK+G++DK L+++ +G P +VT+N L++ +C G L D L M
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P+ T+ +L+ C ++ A ++ M RG+ PD +Y L+ +CK M+
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 1091
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L EM G G T ++++G+ K + L A + +++R G++ ++I+D+
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 1151
Query: 423 VALCQDNRP 431
+ RP
Sbjct: 1152 DTKYKGKRP 1160
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 215/422 (50%), Gaps = 2/422 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
YV+ +RE + FR G SI +CN LL GL+K+ +D W++Y+E+ R G+
Sbjct: 36 TYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQV 95
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T NI+ + CKN ++ FL +EE+G PD+VTYNTLI++YC++G L +AF L
Sbjct: 96 NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM 155
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P + TY ++NGLCK GK A + M+ G+SPD +YN L+ C+
Sbjct: 156 DSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRN 215
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M +++ + EM G+ PD + ++ K G L AL +++ G++ IY
Sbjct: 216 DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 275
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ A + + + + G V + YN ++ LCK +++A L EM +
Sbjct: 276 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 335
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R + P T+ LI + G +AV+L + M++ + PD LI+G+C ++ K
Sbjct: 336 RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEK 395
Query: 539 AEALLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
L + +IY SY + N + G +S+ L + GF +TC ++
Sbjct: 396 VNELWNDMISR-RIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIV 454
Query: 598 HS 599
Sbjct: 455 KG 456
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 216/435 (49%), Gaps = 1/435 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF D+++ N AY + GL+ E+F+ G +P + + N ++NGL K +
Sbjct: 128 VFPDVVTYNTLIN-AYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
V +EM +IG+ P+T T+NIL C+N ++ +++ +G PDLV+++ LI
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 246
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
K G L+ A +R M + PD V YT L+ G C+ G + EA ++ M+ +G D
Sbjct: 247 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YNT++ CKE + E+ L EM G++PD +T ++ GY K+G + A+ L
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ + + Y+ LI C+ + L + P+ Y L+ C
Sbjct: 367 MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMG 426
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V++A L DEMV++ + ++ T ++ +C G + +A + ML G++PD
Sbjct: 427 CVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYN 486
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LING+ E+++++A AL+ + D +YN + N F+ G + + + + +
Sbjct: 487 TLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIER 546
Query: 585 GFAPNNLTCKYMIHS 599
G P+ T +I+
Sbjct: 547 GVNPDRSTYTSLING 561
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 209/418 (50%), Gaps = 9/418 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y I++ L K+ A +L E+++ + P + L+ C + N
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK-IGMSPDTATYNILLVECCRNDN---- 217
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ ++ + F + G P +VS + L+ L K C+DQ + + +M G+ P+
Sbjct: 218 ----MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ IL FC+NG + + +++ E+G D+VTYNT+++ CK+ L++A L+ M
Sbjct: 274 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 333
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V PD T+TTL+NG K+G + +A LF M+ R L PD+V+YNTLI +CK +M
Sbjct: 334 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 393
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L +M+ IYP+ + I++ GY G + A L E+ G + + +
Sbjct: 394 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C+ A L + G VP YN L+ K +++ A L ++M + +
Sbjct: 454 VKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGL 513
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + TY ++ F GR EA +M +M+E G+ PD LING+ + ++ +A
Sbjct: 514 LPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 571
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 199/416 (47%), Gaps = 1/416 (0%)
Query: 188 ESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ K+F ++ G P +V+ N L+N + +++ +++ + M G+ P T+N +
Sbjct: 114 ENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAI 173
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+ CK G + G L+++ + G PD TYN L+ C+ + DA ++ M + V
Sbjct: 174 INGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGV 233
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+PDLV+++ L+ L K G + +A + F M + GL+PD V Y LI +C+ G M E+
Sbjct: 234 VPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALK 293
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ EM+ G D T I+ G KE L A L E+ GV + LI
Sbjct: 294 VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS 353
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+D A +L E + Q P + YN L++ CK + L ++M+ R I P+
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 413
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+Y LI +C +G EA L DEM+E G C ++ GYC + KA+ L
Sbjct: 414 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 473
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + D +YN + N F ++ ++ + L + G P+ +T +++ +
Sbjct: 474 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 529
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 168/327 (51%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N+L+ K G ++ A+ +Y+ + R V ++ T ++N LCK K+ M
Sbjct: 66 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+G+ PD+V+YNTLI AYC++G ++E+ L+ M G G+ P FT I+ G K G+ L
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A ++ E+ + G+S Y+ L+V C+++ A + + + G VP L ++ L+
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
L K + AL +M + + P Y LI FC G EA+ + DEMLE G +
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D ++NG C EK +++A+ L ++ D ++ + N +++DG+++K + L
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ ++ P+ +T +I KG E
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSE 392
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G++ E+ K + L+ G +V+ N +LNGL K + + +++ EM G+ P
Sbjct: 281 GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFP 340
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TF L + + K+G+++K E + + PD+VTYNTLI +CK + L+
Sbjct: 341 DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELW 400
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ ++Y L+NG C G V EA +L+ MV +G I++ NT++ YC+
Sbjct: 401 NDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRA 460
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ L M+ GI PD T ++ G+ KE +
Sbjct: 461 GNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM---------------------- 498
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+R FA L+ ++ G +P + YN ++ + + +A L+ +M++
Sbjct: 499 ----------DRAFA---LVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 545
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
R + P STY +LI EA + DEML+ G +PD +
Sbjct: 546 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 243/542 (44%), Gaps = 67/542 (12%)
Query: 79 LQNDLKPLLPHLGAHEISRV--LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHIL 136
L LK +LP L +H I+ + L +S +FFN++ + + T NY + H L
Sbjct: 50 LNPTLKRILPSLTSHHITNLINLNPLSLPPLSLFSFFNYLASRPPFRHTLHNYSTMAHFL 109
Query: 137 AWNNKFSFAMKMLCELVELV-------------KDCP------HSVDVFQDLISCTEDCN 177
+ +N S + ++ + + P HSV VF LI
Sbjct: 110 SSHNLLSQTHSLFLFIISKMGHHSSTSLISSLIQTVPTHHRHNHSVLVFDALI------- 162
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-IDQCWQVYEEMGRIGI 236
AY I ++ + R F + C++LL ++KLN CW+ Y E+ G
Sbjct: 163 IAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGY 222
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN + FNIL H FCK GDV ++I G P +V++NTLIS YC+ + + F
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFV 282
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH------------------ 338
L +M + PD+ TY+ L+NGLCKE +V EA+ LF M
Sbjct: 283 LKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQC 342
Query: 339 -----------------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
RG+ PD+++YN LI C++G ++E++ LL EM+GNG PD
Sbjct: 343 KHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKI 402
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ G K+G + SAL + + G+ + + LI LC+D R A +L+ +
Sbjct: 403 TFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDM 462
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G+ P Y +++ CK V L EM P + TY AL+ FC G+
Sbjct: 463 LSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A L+ ML ++P+ +L++G+C + F +K + D SY A+
Sbjct: 523 KNAKMLLHAMLNMEVVPNDITFNILLDGHCKH---GSSVDFKIFNGEKGLVSDYASYTAL 579
Query: 562 FN 563
N
Sbjct: 580 VN 581
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 214/428 (50%), Gaps = 7/428 (1%)
Query: 177 NWAY-------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+W+Y K G + ++ F+K L G PS V+ L++GL N D +++
Sbjct: 10 SWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M R G P+ T+N++ CK G +++ ++K+ E+G PD+VTYNT++ CK G
Sbjct: 70 DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG 129
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R+ +A L+ M R P+ ++ T++ GLC++ K+ +A Q+FH M R + PD SY
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI K GK+ E+ L M+ +GI P T +++ G L AL L ++
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G SR ++ LI A C+ + A LL+R+ DG+VP + Y+ L+ LC V DA
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L ++MV R KP++ T LI C GR EA ++D M+ SG PD L++G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+C +A LL + + +Y A+ + + L + + + G APN
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 590 NLTCKYMI 597
T +I
Sbjct: 430 LFTYTALI 437
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 219/445 (49%), Gaps = 13/445 (2%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S V AL FN ++ L P ++ I+ L +K A ++ E+ +D P
Sbjct: 126 CKSGRVEEALLLFNEMER-LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME--ARDIP 182
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ LI K G + E++K FR+ LD G PS V+ N +++G+
Sbjct: 183 PDSWSYGILID-------GLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++++ M G P+ TFNIL CK G +D+ L+++ ++G PD+VTY+T
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LIS C R++DA +L M +R P +VT TL++GLCK G+++EA ++ MV G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
SPD+V+YNTL+ +C+ G+ + ++ LL +M+ G+ P+ T +V G K RL A
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+ +++ G + + Y LI+ C + L + G P +Y L L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 461 CKCDSVADALLLKDEMVD--RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK A AL + E + R+ YR + G+ A+ + +M+ G LP
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLP 535
Query: 519 DSQICRVLINGYCMEKDVNKAEALL 543
+ C L+ G C +A A+L
Sbjct: 536 APERCASLVAGLCKSGQGGEARAVL 560
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 209/456 (45%), Gaps = 9/456 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P++ Y ++H L N F A ++ ++ + CP S + +I A
Sbjct: 41 VTPSTVAYTSLIHGLCMANSFDDARELFADMNR--RGCPPSPVTYNVIID-------ASC 91
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ +K ++ G P +V+ N +++GL K +++ ++ EM R+G PN
Sbjct: 92 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRR 151
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ N + C+ +D+ ++E PD +Y LI K G+LN+A+ L+R M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P VTY +++G+C + EA +LF M +G P ++N LI A+CK GKM
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ LL M +G PD T ++ G R+ A +L+ ++ + + + L
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A +L+ + G P + YN L+ C+ A L +MV R +
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY AL+ C R EA + +M SG P+ LI G+C V+
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L G D Y + + G ++ +E+
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 167/369 (45%), Gaps = 35/369 (9%)
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ E PD +Y LI K G+LNDA L++ + V P V YT+L++GLC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+A +LF M RG P V+YN +I A CK G ++E+ L+ +M+ +G PD T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR--------------- 430
++ G K GR+ AL L E++R G + +R ++ +I+ LCQ ++
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 431 --PFA------------------ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
P + A L R+ G PS YN ++ +C ++ +AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L M + +PS T+ LI C G+ EA L+ M + G +PD LI+G
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A LL K+ + N + + + G + + E+ + G +P+
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 591 LTCKYMIHS 599
+T ++H
Sbjct: 361 VTYNTLVHG 369
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 92/228 (40%), Gaps = 37/228 (16%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ + + G P +V+ N L++G + ++ ++ +M G+ PN
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L CK + + G +++ G P+L TY LI +C G+++ L+ M
Sbjct: 397 TYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM 456
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR-------------------------- 335
+ PD V Y TL LCK G+ A ++
Sbjct: 457 VCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAG 516
Query: 336 -----------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
MV G P +L+ CK G+ E++++L E+M
Sbjct: 517 KMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 214/441 (48%), Gaps = 7/441 (1%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI D N A E+F+ F + G P+I +CN LL+ LKLN +
Sbjct: 153 VFDYLIKSCCDMNRA-------DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W +Y EM R+ I + +TFNI+ +V CK G + K F+ +E G P++VTYNT++
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YC GR+ A + M R+ + PD TY +L++G+CK+G++ EA ++F MV +GL P
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V YNTLI +C +G + + + EM+ GI P T ++ E R A ++
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+Q G+S Y+ LI C+ A L + + G P+ + Y L+ L K +
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A L ++ + P + + ALI C A L+ +M + PD
Sbjct: 446 RMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFN 505
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
++ G+C E V +A L ++ D S+N + + ++ GD+ ++ L
Sbjct: 506 TIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDT 565
Query: 585 GFAPNNLTCKYMIHSLWKGME 605
GF P LT ++ L K E
Sbjct: 566 GFNPTVLTYNALVQGLCKNQE 586
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 175/359 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+IV+ N +++G ++ + M R I P++ T+ L CK G +++
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ E++ ++G P V YNTLI +C KG L+ A M ++ + P + TY +L++
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L E + EA + + +G+SPD ++YN LI YC+ +++ L EM+ +GI P
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ K+ R+ A +L ++ GV +++ LI C ++ A LL+
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLK 490
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + P +N +M+ C+ V +A L DEM R IKP ++ LI + G
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+A + +EML++G P L+ G C ++ + AE LL K D +Y
Sbjct: 551 DIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 162/329 (49%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P + L++G+ K +++ +++EEM + G+ P+ +N L FC G++D +
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ +++ ++G P + TYN+LI + + R ++A + + + + + PD +TY L+NG
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C+ ++A L M+ G+ P +Y +L+ K+ +M+E+ L ++ G+ PD
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDV 466
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
++ G+ + A L+ ++ R V ++ ++ C++ + A L +
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G P +N L+ + + DA +++EM+D P++ TY AL+ C
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLING 529
A L+ EM+ GM PD LI G
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 168/378 (44%), Gaps = 44/378 (11%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y IVH + + A +L + + K P S + LIS
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTM-KRQKIEPDSF-TYGSLIS-------GMC 302
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K F + + G +PS V N L++G +D +EM + GI P
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC--------------- 286
T+N L H D+ +++I+E+G PD +TYN LI+ YC
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422
Query: 287 --------------------KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
KK R+ +A L++ + VLPD++ + L++G C V
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNV 482
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+ A +L M + PD V++NT++ +C+EGK++E++ L EM GI PD + +
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + G + A + E+ G + + Y+ L+ LC++ A LL+ + G
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602
Query: 447 VPSLEIYNELMESLCKCD 464
P Y L+E + K +
Sbjct: 603 TPDDTTYFTLIEGIAKVN 620
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 158/320 (49%), Gaps = 1/320 (0%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF +V ++ LI S C R ++AF + M + VLP + T +L++ K + A
Sbjct: 147 GFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L+ M + + ++N +I CKEGK++++K + M +G+ P+ T IV G
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y GR+ +A ++ ++R + Y LI +C+ R A+ + E + Q G PS
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
IYN L++ C ++ A KDEM+ + I P++STY +LI R+ EA ++
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
E+ E G+ PD+ +LINGYC + KA L ++Y ++ ++ ++
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445
Query: 570 DLSKLMELQKRFLRLGFAPN 589
+ + +L K+ G P+
Sbjct: 446 RMKEADDLFKKITSEGVLPD 465
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 4/234 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P ++ N L+NG + + + +++EM GI P T+ L HV K + +
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +KI EG PD++ +N LI +C + AF L + M R V PD VT+ T+M G
Sbjct: 451 DDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+EGKV EA +LF M RG+ PD +S+NTLI Y + G ++++ + EM+ G P
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 380 TFTCQIIVQGYGK--EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
T +VQG K EG L A L+ E+ G++ Y LI + + N P
Sbjct: 571 VLTYNALVQGLCKNQEGDL--AEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%)
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+ + L+ C + EA + F+ M +G+ P I + N+L+ + K + + + L E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M I +T I++ KEG+L A + V ++ GV + Y+ ++ C R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
AA ++L + + P Y L+ +CK + +A + +EMV + ++PS Y
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI FC G A + DEML+ G+ P LI+ ME+ ++AE ++ +K
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + N + + K L L G P T ++H L K
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 98/185 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K ++E+ F+K G P ++ N L++G + + +++ ++M R+ + P+
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN + C+ G V++ ++++ G PD +++NTLIS Y ++G + DAF + M
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P ++TY L+ GLCK + A +L MV +G++PD +Y TLI K
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622
Query: 362 QESKS 366
E+K+
Sbjct: 623 DENKN 627
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 167/603 (27%), Positives = 283/603 (46%), Gaps = 49/603 (8%)
Query: 16 ISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSH 75
I +L F S+S+A++S+ I S K + L+N +P +V
Sbjct: 82 IFRLPFVSYSNANNSFQYLDI-GSLRKIIQQDLWN------DPKIVV------------- 121
Query: 76 LTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHI 135
L + L P+ +S++LL + D AL FF W + + + T+ +YC+IVH+
Sbjct: 122 --LFDSALAPIW-------VSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHL 172
Query: 136 LAWNNKFSFAMKMLCELVELVK-DCPHSV-DVFQDLISCTEDCNWA----------YVKV 183
+ ++ A + E++ + D V ++F L S C +V++
Sbjct: 173 VFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVEL 232
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ E+ + F + + P SCNFLL+ L K + + +M GI P+ T+
Sbjct: 233 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 292
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ CK GD++ ++ E G PD+VTYN+LI Y K G L + L+ M
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+PD++TY L+N CK K+ A + F M + GL P++V+Y+TLI A+CKEG MQ
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 412
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +M G+ P+ FT ++ K G L A L+ ++ + GV ++ Y L+
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 472
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R A + + +DG P+ ++Y L+ K + + DA+ + +M + NIKP
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 532
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L Y ++I C + E +++EM G+ + I +I+ Y K+ L
Sbjct: 533 DLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF---KAGKSSDAL 589
Query: 544 GFFAKKFQIYDTE----SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
FF ++ Q E +Y + + + G + ++ R L LG PN +I
Sbjct: 590 NFF-QEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648
Query: 600 LWK 602
L K
Sbjct: 649 LCK 651
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 207/454 (45%), Gaps = 35/454 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + E F + DVG P I++ N L+N K + + ++ + EM G+ P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L FCK G + + G P+ TY +LI + CK G L +A+ L
Sbjct: 393 NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 452
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS---------------- 342
M + V ++VTYT L++GLCK G++ EA ++F M+ G+S
Sbjct: 453 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 512
Query: 343 -------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
PD++ Y ++I+ +C + K++E+K +L EM GI +
Sbjct: 513 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 572
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ Y K G+ ALN E+Q GV + Y LI LC+ A R+
Sbjct: 573 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P++ +Y L++ LCK + + A L DEM R + P ++ + ALI G E
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 692
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ L+ M E + D + L++G+ ++++A +K + + +
Sbjct: 693 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + G L + +EL+ R+G + T ++ +
Sbjct: 753 EYYKRGQLDEAIELKNEMERMGLITESATMQFPV 786
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 199/404 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + S + F + ++G P +V+ N L++G K+ +++ ++ EM +G P+
Sbjct: 301 KEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDII 360
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + +CK + + + +++ G P++VTY+TLI ++CK+G + A L+ M
Sbjct: 361 TYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM 420
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R +LP+ TYT+L++ CK G + EA +L + M+ G+ +IV+Y L+ CK G+M
Sbjct: 421 RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRM 480
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ + M+ +GI P+ +V GY K R+ A+ ++ ++ + +Y +
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 540
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C + +LE + G + I ++++ K +DAL EM D +
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ ++ TY LI C G AV ML G+ P+ + LI+G C + A+
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKK 660
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
L + D ++ A+ + + G+L + + L R L
Sbjct: 661 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +VH + AMK+L ++ E ++ DLI W +
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTE--------CNIKPDLI-LYGSIIWGHC 545
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ E+ + G + V +++ K ++EM +G+
Sbjct: 546 SQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L CK G V+ + ++ G P++ Y +LI CK + A L+ M
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEM 665
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + PD+ +T L++G K G ++EA L RM + D+ Y +L+ + + G++
Sbjct: 666 QCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL 725
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
+++ EM+ GI P+ C +++ Y K G+L A+ L E++R G+
Sbjct: 726 HQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 211/409 (51%), Gaps = 2/409 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G+ PS+ + N +L L + + + M R G+ PN +T+NIL C G +++
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR-NVLPDLVTYTTLMN 318
G + + G P+ VTYNTL++++C+ G L+ A + +M N P+LVT+ +++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK G++ A ++F MV GL+PD+VSYNTL+ YCK G + ES ++ EM G+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ K G L A+ LV +++ G+ ++ + LI C+ A +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G PS+ YN L+ CK + A L EM + +KP + TY +I +C +
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G A L +ML+ G+LPD+ LI G C EK +N A L + D +Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + ++G++ K + L +R G P+ +T +I+ L K K
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 201/393 (51%), Gaps = 1/393 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++ + N L+ L +++ V +M G PN T+N L FC+ G++D
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 206
Query: 260 NGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ + EEG P+LVT+N++++ CK GR+ A ++ M R + PD+V+Y TL++
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 266
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK G + E+ +F M RGL PD+V++ +LI A CK G ++++ +L+ +M G+
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ G+ K+G L AL V E+++ G+ S Y+ LI C+ R A L+
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ P + Y+ ++ CK ++ A L +M+ + + P TY +LI C
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R +A L + ML+ G+ PD LI+G+C E +V KA +L +K + D +Y
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ + N ++ + L + P+N+
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 235/499 (47%), Gaps = 29/499 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC---TEDCNW 178
+ P Y ++V L + A+ ++ ++ C + + L++ + +
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRG--AGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A V L+RE +P++V+ N ++NGL K ++ +V++EM R G+ P
Sbjct: 206 AERVVSLMREEGNA---------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++N L +CK G + + ++ + G PD+VT+ +LI + CK G L A L
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + + VT+T L++G CK+G + +A M G+ P +V YN LI YCK
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M ++ L+ EM + PD T I+ GY K G L SA L ++ + GV Y
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ R A L E + Q G P Y L++ CK +V AL L DEM+
Sbjct: 437 SSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 496
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS------QIC--------- 523
+ + P + TY LI R+ EA L+ ++ +PD+ +C
Sbjct: 497 KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ G+CM+ + +A+ + + D Y+ + + G++ K + K+ LR
Sbjct: 557 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF+PN+ + ++ L++
Sbjct: 617 SGFSPNSTSTISLVRGLFE 635
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 209/438 (47%), Gaps = 50/438 (11%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + K F + + G P +VS N LL+G K+ C+ + V+ EM + G+ P+
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 242 TFNILTHVFCKNGDVDK-----------------------VNGF------------LEKI 266
TF L H CK G++++ ++GF +E++
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ G P +V YN LI+ YCK GR++ A L R M + V PD+VTY+T+++G CK G +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A QL +M+ +G+ PD ++Y++LI C+E ++ ++ L M+ G+ PD FT +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL+L E+ R GV Y LI L + R A LL ++ +
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 447 VPSLEIYNELMESLCKCDSVADALLLK---------------DEMVDRNIKPSLSTYRAL 491
VP Y+ LM K + + LLK M+DRN K S Y L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C G +A+S +ML SG P+S L+ G E V +A+ +
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654
Query: 552 IYDTESYNAVFNMFAEDG 569
+ D E+ A+ ++ ++G
Sbjct: 655 LADAEASKALIDLNRKEG 672
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+D LI + RP A + L GY PS+ YN ++ +L S+ A M+
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P++ TY L+ C GR EAV ++ +M +G P++ L+ +C +++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 538 KAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
AE ++ ++ + ++N++ N + G + ++ +R G AP+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/409 (31%), Positives = 211/409 (51%), Gaps = 2/409 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G+ PS+ + N +L L + + + M R G+ PN +T+NIL C G +++
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR-NVLPDLVTYTTLMN 318
G + + G P+ VTYNTL++++C+ G L+ A + +M N P+LVT+ +++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK G++ A ++F MV GL+PD+VSYNTL+ YCK G + ES ++ EM G+ P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ K G L A+ LV +++ G+ ++ + LI C+ A +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G PS+ YN L+ CK + A L EM + +KP + TY +I +C +
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G A L +ML+ G+LPD+ LI G C EK +N A L + D +Y
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTY 471
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + ++G++ K + L +R G P+ +T +I+ L K K
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 520
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 201/393 (51%), Gaps = 1/393 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++ + N L+ L +++ V +M G PN T+N L FC+ G++D
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 206
Query: 260 NGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ + EEG P+LVT+N++++ CK GR+ A ++ M R + PD+V+Y TL++
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 266
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK G + E+ +F M RGL PD+V++ +LI A CK G ++++ +L+ +M G+
Sbjct: 267 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 326
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ G+ K+G L AL V E+++ G+ S Y+ LI C+ R A L+
Sbjct: 327 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 386
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ P + Y+ ++ CK ++ A L +M+ + + P TY +LI C
Sbjct: 387 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 446
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R +A L + ML+ G+ PD LI+G+C E +V KA +L +K + D +Y
Sbjct: 447 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 506
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ + N ++ + L + P+N+
Sbjct: 507 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 539
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 235/499 (47%), Gaps = 29/499 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC---TEDCNW 178
+ P Y ++V L + A+ ++ ++ C + + L++ + +
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRG--AGCAPNAVTYNTLVAAFCRAGELDG 205
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A V L+RE +P++V+ N ++NGL K ++ +V++EM R G+ P
Sbjct: 206 AERVVSLMREEGNA---------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++N L +CK G + + ++ + G PD+VT+ +LI + CK G L A L
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + + VT+T L++G CK+G + +A M G+ P +V YN LI YCK
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M ++ L+ EM + PD T I+ GY K G L SA L ++ + GV Y
Sbjct: 377 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ R A L E + Q G P Y L++ CK +V AL L DEM+
Sbjct: 437 SSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 496
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS------QIC--------- 523
+ + P + TY LI R+ EA L+ ++ +PD+ +C
Sbjct: 497 KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ G+CM+ + +A+ + + D Y+ + + G++ K + K+ LR
Sbjct: 557 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF+PN+ + ++ L++
Sbjct: 617 SGFSPNSTSTISLVRGLFE 635
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 220/459 (47%), Gaps = 50/459 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + K F + + G P +VS N LL+G K+ C+ + V+ EM + G+ P+
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294
Query: 242 TFNILTHVFCKNGDVDK-----------------------VNGF------------LEKI 266
TF L H CK G++++ ++GF +E++
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ G P +V YN LI+ YCK GR++ A L R M + V PD+VTY+T+++G CK G +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A QL +M+ +G+ PD ++Y++LI C+E ++ ++ L M+ G+ PD FT +
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL+L E+ R GV Y LI L + R A LL ++ +
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534
Query: 447 VPSLEIYNELMESLCKCDSVADALLLK---------------DEMVDRNIKPSLSTYRAL 491
VP Y+ LM K + + LLK M+DRN K S Y L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C G +A+S +ML SG P+S L+ G E V +A+ +
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ D E+ A+ ++ ++G++ L+++ R G P++
Sbjct: 655 LADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 693
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 2/173 (1%)
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+D LI + RP A + L GY PS+ YN ++ +L S+ A M+
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDA-SLPSARRFLSSML 144
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P++ TY L+ C GR EAV ++ +M +G P++ L+ +C +++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 538 KAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
AE ++ ++ + ++N++ N + G + ++ +R G AP+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPD 257
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 255/547 (46%), Gaps = 30/547 (5%)
Query: 84 KPLLPHLGAHEISRVLLRCQSD--SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK 141
K L+PHL E L +S+ +AL FF++V + + T+ +YC+++H+L N+
Sbjct: 76 KELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLLVGNDL 135
Query: 142 FSFAMKMLCELV-----------------ELVKDCPHSVDVFQ--------DLISCTEDC 176
S A +L L+ E+ + VF+ DL+
Sbjct: 136 LSPARLLLIRLIDGKVPAFYARNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYST 195
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ ++ G + F K G PS+ +C FLL+ L+K N + + ++VY+ + GI
Sbjct: 196 QFKHLGFGFAADVFSLLAKK---GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGI 252
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ H F+ + + FCK D G K+E+ G P++VTYN +I CK GRL++A+
Sbjct: 253 IPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYR 312
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M + V P L+TY+ +NGL K K+ EA+ + M G P+ V YNTLI YC
Sbjct: 313 FKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYC 372
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ + +M+ GI P++ T ++QG+ K ++ A N++ E+ G+ I++
Sbjct: 373 KMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQG 432
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ +I LC R A + + P+ + L+ LCK +A+ L +
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRL 492
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + P++ T ALI C G E + L+ +MLE G++ D LI+G C E V
Sbjct: 493 LGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKV 552
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ L KK D ++N + + + + L + G+ PN T M
Sbjct: 553 KEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVM 612
Query: 597 IHSLWKG 603
I K
Sbjct: 613 IDGYCKA 619
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 213/456 (46%), Gaps = 35/456 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+++ K + PS+++ + +NGL+KL ID+ V +EM +G PN
Sbjct: 303 KSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEV 362
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK-------------- 287
+N L +CK G++ + + + +G P+ VT N+LI +CK
Sbjct: 363 VYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEM 422
Query: 288 ---------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
K R A + R M RN+ P+ TTL++GLCK GK
Sbjct: 423 IGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQ 482
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA +L+ R++ +G P+IV+ N LI CK G MQE+ LL +M+ G+ D T +
Sbjct: 483 GEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTL 542
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G KEG++ L E+ + G+ ++ L+ LC ++ A+ L ++GY
Sbjct: 543 ISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGY 602
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
VP++ Y +++ CK + V + L +E+V + ++ + Y +LI +C G A
Sbjct: 603 VPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFR 662
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L D+M G+L L++G C V+ A+ LL K+ + + Y + ++
Sbjct: 663 LRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYS 722
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G ++K+ + + PN T MI K
Sbjct: 723 KLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 221/488 (45%), Gaps = 44/488 (9%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ P+ Y + ++ L K A +L E+ EL P+ V V+ LI Y
Sbjct: 321 KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSEL-GFVPNEV-VYNTLID-------GY 371
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+G I E+ K L G P+ V+ N L+ G K + I Q V EEM G+ N
Sbjct: 372 CKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQ 431
Query: 241 HTFNI-----------------------------------LTHVFCKNGDVDKVNGFLEK 265
+F++ L CK G + +
Sbjct: 432 GSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCR 491
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ +GF P++VT N LI CK G + + L R M R ++ D +TY TL++G CKEGK
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGK 551
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V+E +L MV +G+ PDI ++N L+ C K+ E+ L +E NG P+ +T +
Sbjct: 552 VKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGV 611
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ GY K ++ NL+ EL + ++ +Y+ LI A C + AA L + + G
Sbjct: 612 MIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ S Y+ LM LC V DA L DEM + P++ Y +I + +G+ +
Sbjct: 672 VLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVN 731
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++ EM + P+ ++I+G+C +A LL +K + D +YNA N
Sbjct: 732 IVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791
Query: 566 AEDGDLSK 573
++G + +
Sbjct: 792 CKEGKVEE 799
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 190/385 (49%), Gaps = 11/385 (2%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
NW +K + + R+ L +P+ L++GL K + +++ + G
Sbjct: 439 NWLCLKFRFV-TALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF 497
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T N L H CK G++ + L + E G D +TYNTLIS CK+G++ + F
Sbjct: 498 VPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFE 557
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M ++ + PD+ T+ L++GLC K+ EA +L+H G P++ +Y +I YC
Sbjct: 558 LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYC 617
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K K++E ++LL E++ + ++ +++ Y G + +A L +++ GV +S
Sbjct: 618 KANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCA 677
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+ LC A LL+ + ++G +P++ Y ++ K + ++ EM
Sbjct: 678 TYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
NI P+ TY +I FC +G++ EA L++EM E G+LPD+ NG C E V
Sbjct: 738 SSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKV 797
Query: 537 NKAEALLGFFAKKFQIYDTESYNAV 561
+A F++ D S AV
Sbjct: 798 EEA----------FKVCDEMSSGAV 812
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 4/181 (2%)
Query: 213 NGLLKLNCID----QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L++ CI+ +++ ++M G+ + T++ L H C G VD L+++ +
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
EG P++V Y T+I Y K G++N + + M N+ P+ TYT +++G CK GK +E
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +L + M +G+ PD V+YN CKEGK++E+ + EM + D T ++
Sbjct: 765 AAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLID 824
Query: 389 G 389
G
Sbjct: 825 G 825
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 86/164 (52%), Gaps = 3/164 (1%)
Query: 192 TFRKTLDVGFQPSIVSC---NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
FR D+ + ++SC + L++GL + +D + +EM + G+ PN + +
Sbjct: 660 AFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIG 719
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+ K G ++KVN L+++ P+ TY +I +CK G+ +A L M + +LP
Sbjct: 720 GYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP 779
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
D VTY NGLCKEGKV EA ++ M + D ++Y TLI
Sbjct: 780 DAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+GL+ ++ + G P++V ++ G KL +++ V +EM I PN T
Sbjct: 689 IGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFT 748
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ I+ FCK G + L ++ E+G PD VTYN + CK+G++ +AF + M
Sbjct: 749 YTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMS 808
Query: 303 RRNVLPDLVTYTTLMNG 319
V D +TYTTL++G
Sbjct: 809 SGAVCLDEITYTTLIDG 825
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDL-----ISCTEDCNWAYVKVGLIRESFKTFRKT 196
+S M LC + LV D H +D + + C Y K+G + + ++
Sbjct: 679 YSSLMHGLCN-IGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
P+ + +++G KL + ++ EM GI P+ T+N T+ CK G V
Sbjct: 738 SSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKV 797
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLI 282
++ +++ D +TY TLI
Sbjct: 798 EEAFKVCDEMSSGAVCLDEITYTTLI 823
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 217/458 (47%), Gaps = 16/458 (3%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ RVL+ + D A FF W K + +YC++ HIL + A +L E+V
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAY----------VKVGLIRESFKTFRKTLDVGFQPS 204
DC DVF L S C + + +G++ E+ + F K P
Sbjct: 171 SKADC----DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPK 226
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
SCN LL+ KL D + +++M G P T+NI+ CK GDV+ G E
Sbjct: 227 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+++ G PD VTYN++I + K GRL+D + M PD++TY L+N CK G
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ + + M GL P++VSY+TL+ A+CKEG MQ++ +M G+ P+ +T
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ K G L A L E+ + GV + Y LI LC R A L ++
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G +P+L YN L+ K ++ AL L +E+ R IKP L Y I C + + A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+M+EM E G+ +S I L++ Y K N E L
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYF--KSGNPTEGL 562
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 213/449 (47%), Gaps = 46/449 (10%)
Query: 154 ELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
E +KD C V + LI+C C + + +GL + +R+ G +P++VS + L
Sbjct: 321 EEMKDMCCEPDVITYNALINCF--CKFGKLPIGL-----EFYREMKGNGLKPNVVSYSTL 373
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++ K + Q + Y +M R+G+ PN +T+ L CK G++ ++ + G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+ ++VTY LI C R+ +A L+ M V+P+L +Y L++G K + A +
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L + + RG+ PD++ Y T I+ C K++ +K ++ EM GI ++ ++ Y
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 392 KEGRLLSALNLVVELQR------------------------------------FGVSISR 415
K G L+L+ E++ FG+ +
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
I+ +I LC+DN+ AAT+L E++ Q G VP Y LM+ K +V +AL L+D+
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + +K L Y +L+ + +A S ++EM+ G+ PD +C ++ +
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+++A L + K Q+ +++ NA+ NM
Sbjct: 734 IDEAVELQSYLMKH-QLLTSDNDNALPNM 761
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 213/441 (48%), Gaps = 7/441 (1%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI D N A E+F+ F + G P+I +CN LL+ LKLN +
Sbjct: 153 VFDYLIKSCCDMNRA-------DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W +Y EM R+ I + +TFNI+ +V CK G + K F+ +E G P++VTYNT++
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YC GR+ A + M R+ + PD TY +L++G+CK+G++ EA ++F MV +GL P
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V YNTLI +C +G + + + EM+ GI P T ++ E R A ++
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+Q G+S Y+ LI C+ A L + + G P+ + Y L+ L K +
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A L ++ + P + ALI C A L+ +M + PD
Sbjct: 446 RMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFN 505
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
++ G+C E V +A L ++ D S+N + + ++ GD+ ++ L
Sbjct: 506 TIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDT 565
Query: 585 GFAPNNLTCKYMIHSLWKGME 605
GF P LT ++ L K E
Sbjct: 566 GFNPTVLTYNALVQGLCKNQE 586
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 175/359 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+IV+ N +++G ++ + M R I P++ T+ L CK G +++
Sbjct: 251 GVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEA 310
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ E++ ++G P V YNTLI +C KG L+ A M ++ + P + TY +L++
Sbjct: 311 SKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHA 370
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L E + EA + + +G+SPD ++YN LI YC+ +++ L EM+ +GI P
Sbjct: 371 LFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPT 430
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ K+ R+ A +L ++ GV +++ LI C ++ A LL+
Sbjct: 431 KKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLK 490
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + P +N +M+ C+ V +A L DEM R IKP ++ LI + G
Sbjct: 491 DMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRG 550
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+A + +EML++G P L+ G C ++ + AE LL K D +Y
Sbjct: 551 DIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTY 609
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 162/329 (49%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P + L++G+ K +++ +++EEM + G+ P+ +N L FC G++D +
Sbjct: 287 IEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMAS 346
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ +++ ++G P + TYN+LI + + R ++A + + + + + PD +TY L+NG
Sbjct: 347 AYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGY 406
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C+ ++A L M+ G+ P +Y +L+ K+ +M+E+ L ++ G+ PD
Sbjct: 407 CRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDA 466
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
++ G+ + A L+ ++ R V ++ ++ C++ + A L +
Sbjct: 467 IMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDE 526
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G P +N L+ + + DA +++EM+D P++ TY AL+ C
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQE 586
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLING 529
A L+ EM+ GM PD LI G
Sbjct: 587 GDLAEELLKEMVSKGMTPDDTTYFTLIEG 615
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 167/378 (44%), Gaps = 44/378 (11%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y IVH + + A +L + + K P S + LIS
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTM-KRQKIEPDSF-TYGSLIS-------GMC 302
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K F + + G +PS V N L++G +D +EM + GI P
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC--------------- 286
T+N L H D+ +++I+E+G PD +TYN LI+ YC
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEM 422
Query: 287 --------------------KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
KK R+ +A L++ + VLPD + + L++G C V
Sbjct: 423 LASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNV 482
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+ A +L M + PD V++NT++ +C+EGK++E++ L EM GI PD + +
Sbjct: 483 KGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + G + A + E+ G + + Y+ L+ LC++ A LL+ + G
Sbjct: 543 ISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGM 602
Query: 447 VPSLEIYNELMESLCKCD 464
P Y L+E + K +
Sbjct: 603 TPDDTTYFTLIEGIAKVN 620
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 161/328 (49%), Gaps = 1/328 (0%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF +V ++ LI S C R ++AF + M + VLP + T +L++ K + A
Sbjct: 147 GFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L+ M + + ++N +I CKEGK++++K + M +G+ P+ T IV G
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y GR+ +A ++ ++R + Y LI +C+ R A+ + E + Q G PS
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
IYN L++ C ++ A KDEM+ + I P++STY +LI R+ EA ++
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
E+ E G+ PD+ +LINGYC + KA L ++Y ++ ++ ++
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + +L K+ G P+ + +I
Sbjct: 446 RMKEADDLFKKITSEGVLPDAIMFNALI 473
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 4/234 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P ++ N L+NG + + + +++EM GI P T+ L HV K + +
Sbjct: 391 GISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEA 450
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +KI EG PD + +N LI +C + AF L + M R V PD VT+ T+M G
Sbjct: 451 DDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG 510
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+EGKV EA +LF M RG+ PD +S+NTLI Y + G ++++ + EM+ G P
Sbjct: 511 HCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPT 570
Query: 380 TFTCQIIVQGYGK--EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
T +VQG K EG L A L+ E+ G++ Y LI + + N P
Sbjct: 571 VLTYNALVQGLCKNQEGDL--AEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%)
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+ + L+ C + EA + F+ M +G+ P I + N+L+ + K + + + L E
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M I +T I++ KEG+L A + V ++ GV + Y+ ++ C R
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
AA ++L + + P Y L+ +CK + +A + +EMV + ++PS Y
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI FC G A + DEML+ G+ P LI+ ME+ ++AE ++ +K
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + N + + K L L G P T ++H L K
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSK 443
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 97/185 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K ++E+ F+K G P + N L++G + + +++ ++M R+ + P+
Sbjct: 443 KKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEV 502
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN + C+ G V++ ++++ G PD +++NTLIS Y ++G + DAF + M
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P ++TY L+ GLCK + A +L MV +G++PD +Y TLI K
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622
Query: 362 QESKS 366
E+K+
Sbjct: 623 DENKN 627
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 259/586 (44%), Gaps = 61/586 (10%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
+VD + LK HL L + P S LL+ Q D L F W +N
Sbjct: 33 LVDKAITLLKFHPHHLDSLSSRFTP-------QSASYFLLKSQFDQTLTLKFLTWARN-- 83
Query: 121 EIKPTSSNYC--LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
P ++C L +HIL + A + EL D P +FQ L N
Sbjct: 84 --HPFFDSHCKCLSLHILTRFKLYKTAQTLAQELALSASD-PSGSSIFQCLKDSYHVYNS 140
Query: 179 A----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ--CWQ 226
+ Y + +I ++ T GF P ++S N +L+ +++ + +
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
VY EM R + PN +T+NIL FC G++ K G ++E G P++VTYNTLI +YC
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 287 KKGRLNDAFYLYRIMYRR---------NVL--------------------------PDLV 311
K GR+++AF L + M + NV+ PD V
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY TL+NG CKEG +A + MV G+SP +V+Y LI + CK + + +M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G+ P+ T ++ G+ ++G L A ++ E+ G S S Y+ I C R
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A +++ + + G P + Y+ ++ C+ + A +K EMV++ + P TY +L
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C + R EA L EML+ G+ PD LIN YC+E D+NKA L K
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ D +Y+ + N + + L + + P+++T +I
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 214/439 (48%), Gaps = 15/439 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+G I E+F + G QP+++S N ++NGL + + + W++ EEMG G P
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + +CK G+ + ++ G P +VTY LI+S CK LN A +
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ TYTTL++G ++G + EA+++ + M G SP +V+YN I +C
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+M+E+ ++ EM+ G+ PD + I+ G+ ++G L A + E+ GVS Y
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R A L + + G P Y L+ + C + AL L DEM+
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLM-----DEMLESGMLPDSQI----------C 523
+ P TY LI R+ EA L+ +E + S + D+ I
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 617
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI G+CM+ +++A+ + ++ YN + + G+L K L K +
Sbjct: 618 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF P+ +T +I +L+K
Sbjct: 678 SGFVPHTVTVITLIKALFK 696
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 208/432 (48%), Gaps = 15/432 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + + G PS+V+ L+N + K +++ + +++M G+ P
Sbjct: 328 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L F + G +++ L ++ E GF P +VTYN I +C R+ +A +
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + PD+V+Y+T+++G C++G++ A Q+ MV +G+SPD V+Y++LI C+
Sbjct: 448 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E+ L EM+ G+ PD FT ++ Y EG L AL+L E+ G Y
Sbjct: 508 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK----- 473
LI L + R A LL ++ + VPS Y+ L+E+ + + L+K
Sbjct: 568 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 627
Query: 474 ----------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ MV+RN KP + Y +I C G +A +L EM+ SG +P +
Sbjct: 628 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 687
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI E + ++G + ++ + E + + ++G++ ++ + +
Sbjct: 688 ITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAK 747
Query: 584 LGFAPNNLTCKY 595
G PN+ Y
Sbjct: 748 DGLLPNSGKTAY 759
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN L+ C + L EM P++ TY LI +C +GR EA L
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 271
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M GM P+ V+ING C E + +A +L K D +YN + N + +
Sbjct: 272 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 331
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+G+ + + + +R G +P+ +T +I+S+ K
Sbjct: 332 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 2/191 (1%)
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA--DALL 471
S ++D ++ + N A + + G++P + YN +++++ + A
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ EM+ + P++ TY LI FC +G + + EM +G LP+ LI+ YC
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+++A LL + K + SYN + N +G + + E+ + GF P+ +
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320
Query: 592 TCKYMIHSLWK 602
T +++ K
Sbjct: 321 TYNTLLNGYCK 331
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 231/480 (48%), Gaps = 20/480 (4%)
Query: 52 LPETQNPN-KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSAL 110
+PE + P+ V+++ S L D + L L L A + +LL+ Q D V +L
Sbjct: 46 IPEPRGPDLDFVNVVHSHLIHSD------WSKLDCLSMGLTAFRVKHILLKTQKDYVLSL 99
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK-DCPHSVDVFQDL 169
FFNWV T +C+I+HIL KF A +L ++E D P + F+ L
Sbjct: 100 EFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKL--FESL 157
Query: 170 ISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
+ C+ + + + R + TF + D GF P++ SCN L+ LL +
Sbjct: 158 LYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFS 217
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
D Y EM R I PN++T N++ CK G +DK N E++ GF P++ +YN
Sbjct: 218 RGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYN 277
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TLI+ YC KG L+ A L +M + V PD+VT+ TL+NG CK GK++EA +LF M
Sbjct: 278 TLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGM 337
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
LSP V+YN LI Y K G + L EM + D T ++ G KEG+ A
Sbjct: 338 SLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKA 397
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
LV EL G+ + + LI C + A + + + + + P + + L+ +
Sbjct: 398 AYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLST 457
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
C+ + A+ L +EM++R+ P ++ L G+ A+ L E+ +LP+
Sbjct: 458 FCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPE 517
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 141/303 (46%)
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
H F++L F + ++++ GF P + + N +SS R + A YR
Sbjct: 169 HVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYRE 228
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + P+ T ++ CK G++ +A+ +F M G SP++ SYNTLI YC +G
Sbjct: 229 MRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGL 288
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + L M NG+ PD T +V G+ K G+L A L E++ +S + Y+
Sbjct: 289 LSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNI 348
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI + L E + + + YN L+ LCK A L E+ ++
Sbjct: 349 LINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKG 408
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P+ ST+ ALI C +S A + M++S P Q R+L++ +C +D + A
Sbjct: 409 LVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAV 468
Query: 541 ALL 543
LL
Sbjct: 469 QLL 471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 135 ILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFR 194
I + NK + M V P V F L++ + KVG ++E+ K F
Sbjct: 280 IAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVN-------GFCKVGKLQEASKLFG 332
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ + P+ V+ N L+NG K + +++EEM R + + T+N L CK G
Sbjct: 333 EMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEG 392
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
K + +++E+G P+ T++ LI C + + AF +Y+ M + + P T+
Sbjct: 393 KTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFR 452
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ C+ A QL M++R +PD+ + L + GK++ + L E+
Sbjct: 453 MLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQ 512
Query: 375 GIYPDTF 381
+ P+ F
Sbjct: 513 RLLPEGF 519
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 149/380 (39%), Gaps = 63/380 (16%)
Query: 238 PNTHTFN---ILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDLVTYNTLISSYCKKGRLND 293
P++HT I+ H+ K L I E D + +L+ SY RL D
Sbjct: 110 PSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSY----RLCD 165
Query: 294 AF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ +++ ++++ T+ L K R A F RM G P + S N +
Sbjct: 166 SSPHVFDLLFK--------TFAHL-------KKFRNASDTFCRMKDYGFLPTVESCNAYL 210
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+ + + + EM + IYP+++T LNLV
Sbjct: 211 SSLLNFSRGDIALAFYREMRRSRIYPNSYT-----------------LNLV--------- 244
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
I A C+ R A + E +G G+ P++ YN L+ C ++ A+ L
Sbjct: 245 ---------ICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKL 295
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+ M + P + T+ L+ FC +G+ EA L EM + P + +LINGY
Sbjct: 296 RSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSK 355
Query: 533 EKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ L + +FQ+ D +YNA+ ++G K L + G PN
Sbjct: 356 AGNCEMGNRLFEEMS-RFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNAS 414
Query: 592 TCKYMIHS--LWKGMERKFQ 609
T +I+ + K ER FQ
Sbjct: 415 TFSALIYGQCVQKQSERAFQ 434
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 245/498 (49%), Gaps = 19/498 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F NWV + LE++ + + HIL + A +L L ++ S VF
Sbjct: 28 ALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQM---GVGSKSVF 84
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L++ C Y++ G++ ++ +TFR GF PS+ +CN LL L+
Sbjct: 85 GALMNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLV 144
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K + W ++EM +CP+ TFNIL +V C G + K L+K+EE G+ P +V
Sbjct: 145 KERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVV 204
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNT+++ YCKKGR A L M + + D TY L++ LCK + + + L +M
Sbjct: 205 TYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKM 264
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
R +SP+ ++YN++I + KEGK+ + + EM + P+ T ++ G+ +G
Sbjct: 265 RKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNF 324
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL ++ ++ G + Y L+ LC+ + + S+LER+ +G + Y +
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAM 384
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LC+ + +++ L D+M+ + P + T+ LI FC +G+ ++ +M ++G+
Sbjct: 385 IDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGL 444
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY--NAVFNMFAEDGDLSKL 574
P+S I LI YC DV EA + A YD + N + + +DG +
Sbjct: 445 APNSIIYTTLIYNYCKTGDV--VEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVA 502
Query: 575 MELQKRFLRLGFAPNNLT 592
++G PN++T
Sbjct: 503 EYFFHHMSKIGNVPNSIT 520
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 194/419 (46%), Gaps = 4/419 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
K RK + P+ ++ N ++NG +K I ++++EM + + PN T+N L
Sbjct: 261 LKKMRKRM---ISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDG 317
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C +G+ ++ LE +E G P+ V+Y+ L++ C+ + + + M ++
Sbjct: 318 HCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVG 377
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+ YT +++GLC+ G + E+ +L +M+ G+ PD+V+++ LI +C+ GK++ K ++
Sbjct: 378 CIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIIC 437
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M G+ P++ ++ Y K G ++ A + V + R G + I + L+ +LC+D
Sbjct: 438 KMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDG 497
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ A + + G VP+ ++ ++ + A + DEM+ PS TY
Sbjct: 498 KVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYG 557
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
L+ C G+ EA L+D++ D+ ++ + A AL ++
Sbjct: 558 GLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQR 617
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG-FAPNNLTCKYMIHSLWKGMERK 607
+ D+ +Y +F G + + L G +P + + L++ + K
Sbjct: 618 NVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSK 676
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 206/469 (43%), Gaps = 9/469 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S + +++++L K A +L ++ E +++ NW Y K
Sbjct: 166 PDVSTFNILINVLCVEGKLKKAGYLLKKMEE--------SGYVPSVVTYNTVLNW-YCKK 216
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + + G + + N L++ L K N + + + ++M + I PN T+
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + F K G + +++ P+ VTYN LI +C G A + +M
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P+ V+Y+ L+NGLC+ K + + RM G+ ++Y +I C+ G + E
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
S LL +M+ +G+ PD T +++ G+ + G++ + ++ ++ + G++ + IY LI
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ A + + + GY + I N L+ SLCK V A M P
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ +I + G +A S+ DEM+++G P L+ C +A+ LL
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
DT +YN + + G L+ + L ++ P++ T
Sbjct: 577 DKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYT 625
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 176/364 (48%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N F++L V+ + G V + GF+P + T N L+ K+ ++ + +
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R V PD+ T+ L+N LC EGK+++A L +M G P +V+YNT++ YCK+
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ + + L+ +M GI D T ++V K R L+ ++++ +S + Y
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I ++ + AAT + + + +P+ YN L++ C + AL + + M
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
KP+ +Y AL+ C + + S+++ M +GM+ +I+G C +N+
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ LL K + D +++ + N F G + + E+ + + G APN++ +I+
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456
Query: 599 SLWK 602
+ K
Sbjct: 457 NYCK 460
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 176/385 (45%), Gaps = 37/385 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ ES K K L G P +V+ + L+NG ++ I ++ +M + G+ PN+ +
Sbjct: 392 GLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIY 451
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + +CK GDV + + G+D + N L+SS CK G++ A Y + M +
Sbjct: 452 TTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSK 511
Query: 304 RNVLPDLVTYTTLMNG-----------------------------------LCKEGKVRE 328
+P+ +T+ ++NG LC+ GK +E
Sbjct: 512 IGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKE 571
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +L ++ + + D V+YNT++ K G + ++ +L EM+ + PD++T II
Sbjct: 572 AKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFA 631
Query: 389 GYGKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G + G++++AL+ L G VS + +Y + L + + AA E + ++G
Sbjct: 632 GLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLC 691
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAVS 506
L N ++ + +A A + M I PSL+TY L+ + + +
Sbjct: 692 ADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSN 751
Query: 507 LMDEMLESGMLPDSQICRVLINGYC 531
L + M+ +G+ PD C LI G+C
Sbjct: 752 LYNIMMRTGIFPDKLTCHSLILGFC 776
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 184/396 (46%), Gaps = 8/396 (2%)
Query: 190 FKTFRKTLD-VGFQPS---IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
FK ++ LD + + PS V+ N +L K + +++EM + + P+++T+ I
Sbjct: 569 FKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAI 628
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
+ + G + F + +G P+ V Y T + + G+ A Y M +
Sbjct: 629 IFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKN 688
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAYCKEGKMQ 362
+ DL+ ++NG + GK+ +A +F M+ G+ SP + +YN L+ Y K+ +
Sbjct: 689 GLCADLIATNVILNGYSRMGKMAKAGDIF-TMMWSGITISPSLATYNILLHGYAKKKNLS 747
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +L MM GI+PD TC ++ G+ K L L L+ ++ GV++ + ++ LI
Sbjct: 748 KCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLI 807
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+ C+ + A L+ + P + ++ ++ L + +V ++ LL EM++R
Sbjct: 808 MKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCI 867
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P Y AL+ C +G A L DEM G+ L+ G V +A+ +
Sbjct: 868 PDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLV 927
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
L F +K I ++ + +MF + L + ++L+
Sbjct: 928 LDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLK 963
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 189/439 (43%), Gaps = 46/439 (10%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V+AL F+ + + P Y V L + S A CE +E C
Sbjct: 640 VAALHFYGNLLGKGAVSPEKVMYTTFVDGL-FRAGQSKAALYFCEDMEKNGLCA------ 692
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCW 225
DLI+ N Y ++G + ++ F + PS+ + N LL+G K + +C
Sbjct: 693 -DLIATNVILN-GYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCS 750
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+Y M R GI P+ T + L FCK+ +D L+K+ +G D T+N LI Y
Sbjct: 751 NLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKY 810
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C+ + AF L IM ++ PD+ T+ ++++ L + V+E+H L H M+ RG PD
Sbjct: 811 CETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDR 870
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
Y L+ C+ G + + L EM GI +V+G K G+
Sbjct: 871 RQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGK---------- 920
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
V ++ + D+++ + +P++ + LM C+ +S
Sbjct: 921 -----VEEAKLVLDFML--------------------RKSLIPTIATFTTLMHMFCRNES 955
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +AL LKD M ++K + Y LI C G A+ L E+ + G+ P+ +
Sbjct: 956 LVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCI 1015
Query: 526 LING-YCMEKDVNKAEALL 543
LI+ + + + K E LL
Sbjct: 1016 LIDAIFTNDISLAKGEVLL 1034
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 195/466 (41%), Gaps = 45/466 (9%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y K G + E+FK + +G+ + CN L++ L K + + M +IG
Sbjct: 456 YNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV 515
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP------------------------ 273
PN+ TF+ + + + +G+ K +++ + G P
Sbjct: 516 PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRL 575
Query: 274 -----------DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
D VTYNT++ K G L DA L+ M +RNVLPD TY + GL +
Sbjct: 576 LDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIR 635
Query: 323 EGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLY---EMMGNGIYP 378
GK+ A + ++ +G +SP+ V Y T + + G +SK+ LY +M NG+
Sbjct: 636 RGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAG---QSKAALYFCEDMEKNGLCA 692
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRPFAATS 436
D +I+ GY + G++ A ++ + G++IS + Y+ L+ + ++
Sbjct: 693 DLIATNVILNGYSRMGKMAKAGDIFTMMWS-GITISPSLATYNILLHGYAKKKNLSKCSN 751
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L + + G P + L+ CK + L L +M+ + T+ LI +C
Sbjct: 752 LYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYC 811
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+A L++ M + PD +I+ V ++ LL ++ I D
Sbjct: 812 ETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRR 871
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y A+ N G + +L+ LG + ++ ++ L K
Sbjct: 872 QYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAK 917
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/522 (29%), Positives = 252/522 (48%), Gaps = 38/522 (7%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
L+ LKP A + VL+ ++D L+FF W L P+ C++ I
Sbjct: 81 LRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWAC--LRRDPSLEARCIVAQIATA 138
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDL-ISCTEDCNWAYVKVGLIRESFKTFRKTL 197
+ A K++ QD ++ D ++ + K F K L
Sbjct: 139 SKDLKMARKLI-----------------QDFWVNPNLDVGVSFAR--------KLFDKML 173
Query: 198 DVGFQPSIVSCNFLLNGLLK-LNCI------DQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ G S+ SCN ++ L + L+ I + ++ EEM G+ PN +T+N + +
Sbjct: 174 NYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLL 233
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK G V + L ++ EG PD V Y TLI +CK G ++ A+ L+ M +R + PD
Sbjct: 234 CKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDF 293
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+TYT ++ GLC+ G+V EA +LFH MV + L PD V+Y LI YCKEGKM+E+ SL +
Sbjct: 294 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 353
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ G+ P+ T + G K G + +A L+ E+ R G+ ++ Y+ L+ LC+
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN 413
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A L++ + G+ P Y LM++ CK + A L +M+DR ++P++ T+
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ FC G + L+ MLE G++P++ LI YC+ ++ + K
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ D +YN + + ++ + L + + GF NLT
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF---NLT 572
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 191/396 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + R+ + G P V L++G KL + +++++EM + I P+
Sbjct: 235 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 294
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ G V + + ++ + +PD VTY LI YCK+G++ +AF L+ M
Sbjct: 295 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 354
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTYT L +GLCK G+V A++L H M +GL +I +YN+L+ CK G +
Sbjct: 355 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 414
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L+ +M G +PD T ++ Y K ++ A L+ ++ + + ++ L
Sbjct: 415 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 474
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C LL+ + + G +P+ YN L++ C +++ + M + +
Sbjct: 475 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 534
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L +M+ G LI G+ K +A
Sbjct: 535 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 594
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L ++ + D E YN ++ ++G + +EL
Sbjct: 595 LFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 203/427 (47%), Gaps = 19/427 (4%)
Query: 29 SSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLP 88
+ L++I++ + K L Y + N ++ L+C + K ++ L + + + P
Sbjct: 204 GEWVLKLIEEMQIKGLKPNPYTY-------NGVILLLCKTGKVAEAERVLREMISEGIAP 256
Query: 89 HLGAHEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK 147
G + + C+ +VS A F+ ++ +I P Y ++ L + A K
Sbjct: 257 D-GVIYTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADK 314
Query: 148 MLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
+ E+V K + LI Y K G ++E+F + L +G P+IV+
Sbjct: 315 LFHEMV--CKRLEPDEVTYTALID-------GYCKEGKMKEAFSLHNQMLQMGLTPNIVT 365
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
L +GL K +D ++ EM R G+ N +T+N L + CK G++D+ ++ +E
Sbjct: 366 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 425
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
GF PD VTY TL+ +YCK + A L R M R + P +VT+ LMNG C G +
Sbjct: 426 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 485
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+ +L M+ +G+ P+ +YN+LI YC M+ + + M G+ PD T I++
Sbjct: 486 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+G+ K + A L ++ G +++ Y+ LI + + A L E++ ++G V
Sbjct: 546 KGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 605
Query: 448 PSLEIYN 454
EIYN
Sbjct: 606 ADREIYN 612
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ + K + L+ G P+ + N L+ N + ++Y M G+ P+ +T+
Sbjct: 482 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 541
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL CK ++ + + +GF+ + +YN LI + K+ + +A L+ M R
Sbjct: 542 NILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
++ D Y + EGK+ +L + + L DI + NT
Sbjct: 602 EGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 256/523 (48%), Gaps = 28/523 (5%)
Query: 102 CQSDSVSALTFFNWVKN---------------DLEIKPTSSNYCLIVHILAWNNKFSFAM 146
C DSV+ T N + D P +Y ++H N+ A+
Sbjct: 40 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 99
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
+L ++V ++ CP V + +I+ K+ + E+ + K + G QP+++
Sbjct: 100 WLLEQMV--MRGCPPDVVSYTTVIN-------GLCKLDQVDEACRVMDKMIQRGCQPNVI 150
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ L++G ++ +D ++ +M G PN T+N + H C +D +++
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210
Query: 267 EEEGF-DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
EE G PD+ TY+T++ S K G+++DA L M + P++VTY++L++GLCK GK
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGK 270
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA L RM G SP+IV+YNT+I +CK G++ E+ LL EM+ G P+ T +
Sbjct: 271 LDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTV 330
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ + K G+ A+ LV + G + Y+ L+ C+ + A LL + Q G
Sbjct: 331 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
VP++ YN ++ LCK V + +LL ++M+ N P + T+ +I C R A
Sbjct: 391 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAY 450
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNM 564
L + + ESG P+ L++G C + ++AE LL +K D +YN V +
Sbjct: 451 ELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 510
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL--WKGME 605
+ + + +L + L G AP+++T +I SL W+ M+
Sbjct: 511 LCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMD 553
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 237/482 (49%), Gaps = 13/482 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y I+H L K A+++ E+ E CP V + ++ + VK
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEE-SGSCPPDVFTYSTIVD-------SLVK 232
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + ++ + + G P++V+ + LL+GL K +D+ + + M R G PN T
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + CK G +D+ LE++ + G P++VTY L+ ++CK G+ DA L +M
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ +P+L TY +L++ CK+ +V A QL M+ +G P++VSYNT+I CK K+
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E LL +M+ N PD T I+ K R+ A L +Q G + + Y+ L+
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472
Query: 423 VALCQDNRPFAATSLL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
LC+ R A LL E + G P + YN +++ LCK V A L +M+ +
Sbjct: 473 HGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY +I C EA ++++ ML++G P + LI+G+C +++KA
Sbjct: 533 APDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALE 592
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K D +++ + ++ G L + EL + LR G P+ +T ++L
Sbjct: 593 ILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT----YNTLL 648
Query: 602 KG 603
KG
Sbjct: 649 KG 650
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 229/496 (46%), Gaps = 14/496 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV--KDCPHSVDV 165
SAL F ++ P Y IV L + K A C LVE + K C +V
Sbjct: 202 SALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA----CRLVEAMVSKGCSPNVVT 257
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+ L+ K G + E+ ++ G P+IV+ N +++G KL ID+ +
Sbjct: 258 YSSLLH-------GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ EEM G PN T+ +L FCK G + G +E + E+G+ P+L TYN+L+ +
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CKK + A L M ++ +P++V+Y T++ GLCK KV E L +M+ PDI
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++NT+I A CK ++ + L + +G P+ T +V G K R A L+ E
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 490
Query: 406 LQRF-GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ R G S Y+ +I LC+ R A L ++ DG P Y+ ++ SLCK
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A + + M+ P TY LI FC G +A+ ++ +L G PD
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+ I+ + +A LL + + DT +YN + F + ++L + +
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQC 670
Query: 585 GFAPNNLTCKYMIHSL 600
G P+N T ++ L
Sbjct: 671 GCEPDNATYTTLVGHL 686
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 48/448 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++H L K A +L + C ++ + +I + K+
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTR--SGCSPNIVTYNTIID-------GHCKL 303
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E++ + +D G QP++V+ LL+ K + + E M G PN T+
Sbjct: 304 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 363
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +FCK +V++ L + ++G P++V+YNT+I+ CK ++++ L M
Sbjct: 364 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFH---------------RMVH---------- 338
N +PD+VT+ T+++ +CK +V A++LF+ +VH
Sbjct: 424 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 483
Query: 339 -----------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+G SPDI++YNT+I CK ++ + L +M+ +G+ PD T I++
Sbjct: 484 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVI 543
Query: 388 QGYGKEGRLLSALNLVVELQ-RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
K R + N V+EL + G Y LI C+ A +L+ + G
Sbjct: 544 SSLCK-WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 602
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + ++ ++ L K + A L + M+ + P TY L+ FC R+ +AV
Sbjct: 603 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVD 662
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEK 534
L + M + G PD+ L+ G+ ++K
Sbjct: 663 LFEVMRQCGCEPDNATYTTLV-GHLVDK 689
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 143/303 (47%), Gaps = 2/303 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + E + L P IV+ N +++ + K +D ++++ + G PN
Sbjct: 407 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 466
Query: 242 TFNILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L H CK+ D+ L E ++G PD++TYNT+I CK R++ A+ L+
Sbjct: 467 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 526
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD VTY+ +++ LCK + EA+ + M+ G P ++Y TLI +CK G
Sbjct: 527 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 586
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ +L ++ G YPD T I + K GRL A L+ + R G+ Y+
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 646
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL-LKDEMVDR 479
L+ C +R A L E + Q G P Y L+ L S D L + MVD
Sbjct: 647 LLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDT 706
Query: 480 NIK 482
K
Sbjct: 707 GFK 709
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 2/303 (0%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R+ + + +++ GLC G+ +A F M + PD V+YNT+I K +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ LL EM+ NG P+ F+ ++ G+ K R+ +AL L+ ++ G Y
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC+ ++ A +++++ Q G P++ Y L++ C+ + A+ L +M +R
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML-PDSQICRVLINGYCMEKDVNKA 539
+P+ TY ++ C + A+ L EM ESG PD +++ V+ A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L+ K + +Y+++ + + G L + L +R R G +PN +T +I
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299
Query: 600 LWK 602
K
Sbjct: 300 HCK 302
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 213/428 (49%), Gaps = 7/428 (1%)
Query: 177 NWAY-------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+W+Y K G + ++ F+K L G PS V+ L++GL N D +++
Sbjct: 10 SWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M R G P+ T+N++ CK G +++ ++K+ E+G PD+VTYNT++ CK
Sbjct: 70 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 129
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R+ +A L+ M R P+ ++ T++ GLC++ K+ +A Q+FH M + + PD SY
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYG 189
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI K GK+ E+ L M+ +GI P T +++ G L AL L ++
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G SR ++ LI A C+ + A LL+R+ DG+VP + Y+ L+ LC V DA
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L ++MV R KP++ T LI C GR EA ++D M+ SG PD L++G
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+C +A LL + + +Y A+ + + L + + + G APN
Sbjct: 370 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 429
Query: 590 NLTCKYMI 597
T +I
Sbjct: 430 LFTYTALI 437
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 219/445 (49%), Gaps = 13/445 (2%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S V AL FN ++ L P ++ I+ L +K A ++ E+ KD P
Sbjct: 126 CKSSRVEEALLLFNEMER-LGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME--AKDIP 182
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ LI K G + E++K F++ LD G PS V+ N +++G+
Sbjct: 183 PDSWSYGILID-------GLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++++ M G P+ TFNIL CK G +D+ L+++ ++G PD+VTY+T
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LIS C R++DA +L M +R P +VT TL++GLCK G+++EA ++ MV G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
SPD+V+YNTL+ +C+ G+ + ++ LL +M+ G+ P+ T +V G K RL A
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+ +++ G + + Y LI+ C + L + G P +Y L L
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475
Query: 461 CKCDSVADALLLKDEMVD--RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK A AL + E + R+ YR + G+ A+ + +M+ G LP
Sbjct: 476 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 535
Query: 519 DSQICRVLINGYCMEKDVNKAEALL 543
+ C L+ G C +A A+L
Sbjct: 536 APERCASLVAGLCKSGQGGEARAVL 560
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 211/456 (46%), Gaps = 9/456 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P++ Y ++H L N F A ++ ++ + CP S + +I A
Sbjct: 41 VTPSTVAYTSLIHGLCMANSFDDARELFADMNR--RGCPPSPVTYNVMID-------ASC 91
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ +K ++ G P +V+ N +++GL K + +++ ++ EM R+G PN
Sbjct: 92 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 151
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ N + C+ +D+ ++E + PD +Y LI K G+LN+A+ L++ M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P VTY +++G+C + EA +LF M +G P ++N LI A+CK GK+
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ LL M +G PD T ++ G R+ A +L+ ++ + + + L
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A +L+ + G P + YN L+ C+ A L +MV R +
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY AL+ C R EA + +M SG P+ LI G+C V+
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L G D Y + + G ++ +E+
Sbjct: 452 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 167/369 (45%), Gaps = 35/369 (9%)
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ E PD +Y LI K G+LNDA L++ + V P V YT+L++GLC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+A +LF M RG P V+YN +I A CK G ++E+ L+ +M+ +G PD T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR--------------- 430
++ G K R+ AL L E++R G + +R ++ +I+ LCQ ++
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 431 --PFA------------------ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
P + A L +R+ G PS YN ++ +C ++ +AL
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L M + +PS T+ LI C G+ EA L+ M + G +PD LI+G
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A LL K+ + N + + + G + + E+ + G +P+
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360
Query: 591 LTCKYMIHS 599
+T ++H
Sbjct: 361 VTYNTLVHG 369
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 17/257 (6%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNW 178
+ KPT ++H L + A ++L +V S DV + L+
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS----SGQSPDVVTYNTLVH------- 368
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + + + G P++V+ L++GL K N + + V+ +M G P
Sbjct: 369 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L FC G VD ++ G PD V Y TL + CK GR A +
Sbjct: 429 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Query: 299 RI---MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
R R D V Y ++GL + GK+ A MV G P +L+
Sbjct: 489 REGRESLRSEAWGDEV-YRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547
Query: 356 CKEGKMQESKSLLYEMM 372
CK G+ E++++L E+M
Sbjct: 548 CKSGQGGEARAVLEEIM 564
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 255/558 (45%), Gaps = 64/558 (11%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL----- 152
++R Q+D ++AL FN VK + K T Y ++ L + KF +L E+
Sbjct: 12 AVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVD 71
Query: 153 --------VELVKD------CPHSVDVFQ--DLISCTEDCNWAY-------VKVGLIRES 189
+ +++D +V+VF+ D C E +Y V+ G ++
Sbjct: 72 SKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDC-EPSVQSYNAIMNILVEYGYFSQA 130
Query: 190 FKTFRKTLDVGFQPSIVS----------------------------CNF-------LLNG 214
K + + D+G P + + C F +++G
Sbjct: 131 HKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISG 190
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
K NC + + +++EM + GICP+ TFN L HV CK G+V + K+ + G P+
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
L T+N I C+KG +++A L + + PD+++Y TL+ G CK K+ EA H
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+MV+ G+ P+ +YNT+I +CK G MQ + +L + M G PD FT ++ G +G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ A+ + E G S +Y+ L+ L + A L++ + + G P + YN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
++ LCK ++DA + ++ + + P + T+ LI +C +A+ ++D ML
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+ PD L+NG C + ++ +K + +YN + F +D +S+
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 575 MELQKRFLRLGFAPNNLT 592
MEL K G P+ +T
Sbjct: 551 MELFKEMKTRGLTPDIVT 568
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 177/337 (52%), Gaps = 1/337 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + F + ++ GF+ SI+ N L+ GL K + Q Q+ ++M G P+ T+
Sbjct: 370 GDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTY 429
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ + CK G + NG L +G PD+ T+NTLI YCK+ ++ A + M
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD++TY TL+NGLCK K+ F M+ +G +P+I++YN LI ++CK+ K+ E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDIYDYLI 422
+ L EM G+ PD T ++ G G L A L V +++ + S S I++ +I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A C+ A L ++G P Y +++S CK ++ A E + + +
Sbjct: 610 NAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
PS +T ++ C C R EAV +++ M+++G++P+
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 210/455 (46%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ES K F K + G P++ + N + GL + ID+ ++ E + G+ P+
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++N L FCK+ + + +L K+ G +P+ TYNT+I+ +CK G + +A + R
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ +PD TY++L+NGLC K+G V
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A QL M+ G SPDI +YN ++ CK G + ++ +L + + G PD FT +
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K+ + A+ ++ + G++ Y+ L+ LC+ + + + + G
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN L+ES CK V++A+ L EM R + P + T LIC C G +A
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 507 LMDEM-LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L + E + I ++IN +C + +V+ AE L D +Y + + +
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ + G P+ TC +++ L
Sbjct: 648 CKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/529 (29%), Positives = 258/529 (48%), Gaps = 25/529 (4%)
Query: 82 DLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEI----KPTSSNYCLIVHILA 137
+LKP L LL DS L FF W + + + +PTS ++H LA
Sbjct: 34 ELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSK----VLHFLA 89
Query: 138 WNNKFSFAMKMLCELVELVKDCPHSVD-VFQDLIS----------CTEDCNWAYVKVGLI 186
+ ++S K+ L VK+ H+V VF L+ + AYVK +
Sbjct: 90 NSKRYS---KVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLEL 146
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+++ F + D GF+ S+ SCN LL+ L+K N I VY+EM + I N +TFNI
Sbjct: 147 HCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIF 206
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK---GRLNDAFYLYRIMYR 303
+ C+ G ++K +E ++ G P++VTYNTL+ YCK+ G++ A + M
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P+ VT+ TL++G CK+ V A + F M +GL P+IV+YN+LI C GK++E
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +M+G G+ P+ T ++ G+ K+ + A + ++ + + + ++ +I
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C++ SL + +G +P++ YN L+ LC+ + A L +EM ++ +K
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY LI C +S A L++EM G+ P+ L++GYCME + A +
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
K+ + + +YN + + + L L L G PN T
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 170/317 (53%), Gaps = 16/317 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ V+ N L++G K + + +EEM + G+ PN T+N L + C NG +++
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+K+ G P++VTYN LI+ +CKK + +A ++ + ++ ++P+++T+ T+++ CK
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG + E L M+ G+ P++ +YN LI C++ +Q +K LL EM G+ D T
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ G K + +A L+ E+ G+ + Y+ L+ C + + AA ++ R+
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++ P++ YN L++ CK + + A L +EM+++ + P+ +TY
Sbjct: 511 KERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY-------------- 556
Query: 503 EAVSLMDEMLESGMLPD 519
+ V L EMLE G PD
Sbjct: 557 DIVRL--EMLEKGFSPD 571
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 187/398 (46%), Gaps = 38/398 (9%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++L + KN ++ + ++ GF L + N L+S+ K+ ++ D Y+Y+ M
Sbjct: 133 IDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMI 192
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG--- 359
+R + +L T+ +NGLC+ GK+ +A M G+SP++V+YNTL+ YCK G
Sbjct: 193 KRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAG 252
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
KM ++++ + EM+ N I P+ T ++ G+ K+ + +A E+Q+ G+ + Y+
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC + + A L +++ G P++ YN L+ CK + +A + D++ +
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P++ T+ +I +C G E SL ML+ G+LP+ LI G C ++D+ A
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432
Query: 540 EALLGFFAKKFQIYDTESYN--------------------AVFNM--------------- 564
+ LL K D +YN +FN+
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +G L + ++ R + PN +T +I K
Sbjct: 493 YCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G++ E F LD G P++ + N L+ GL + + ++ EM G+
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NIL CKN L ++ G P+ VTYNTL+ YC +G+L A +
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P++VTY L+ G CK K+ A+ L + M+ +GL+P+ +Y+ + ++
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEK 566
Query: 359 GKMQESKSLLYEM 371
G + + LY +
Sbjct: 567 GFSPDIEGHLYNI 579
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/434 (30%), Positives = 219/434 (50%), Gaps = 6/434 (1%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
WAY K R F+ F++ D G + S+ SCN L++GL+K+ I VY+EM R I
Sbjct: 101 WAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIE 160
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-- 295
P +FNI+ + CK G ++K +E ++ G +++TYNTLI YCK G++ +
Sbjct: 161 PTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKA 220
Query: 296 -YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ + M + P+ VT+ L++G CK+ V A ++F M +G+ P++V+YN+LI
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
C GK+ E+ +L +M+ + + P+ T ++ G+ K + A L ++ + G++ +
Sbjct: 281 LCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y+ LI A C+D A +L + G P + YN L+ LC+ + A L
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EM +++K L TY LI C G +A+ L+DEM G+ P +I+GYC E
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ A L K ++ + +YN + F + L L L G PN +T +
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520
Query: 595 YMIHSLWKGMERKF 608
+ + ME+ F
Sbjct: 521 IVTEEM---MEKGF 531
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 13/355 (3%)
Query: 119 DLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVFQDLISCT 173
D++++ S+N Y ++ K K L E+ D CP+ V F LI
Sbjct: 188 DMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEV-TFNILID-- 244
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
+ K + + K F + G +P++V+ N L+NGL +++ + ++M
Sbjct: 245 -----GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVN 299
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ PN T N L + FCKN V + + + ++G P++ TYN LI +YCK + D
Sbjct: 300 SCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMED 359
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
AF LYRIM + V PD+ TY L+ GLC++G + A L M + L D+++YN LI
Sbjct: 360 AFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILID 419
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
+ C +G+M+++ LL EM G+ P T ++ GY KEG L +ALNL ++++ G
Sbjct: 420 SLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLA 479
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ Y+ LI C+ ++ A LL + + G +P+ Y + E + + V D
Sbjct: 480 NVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 16/252 (6%)
Query: 128 NYCLIVHILAWN---NKFSFAMKMLCELVELVKDCPH-----SVDVFQDLISCTEDCNWA 179
N CL +I+ N N F KM+ + EL D P +V + LI A
Sbjct: 299 NSCLKPNIITHNALLNGFC-KNKMVKQAGELFDDMPKQGITPNVTTYNILID-------A 350
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K + ++F +R L G P + + N L+ GL + ++ + EM + +
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+NIL C G++ K L+++ +G P +TYNT+I YCK+G L A L
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + L ++ TY L+ G CK+ K+ +A+ L + M+ +GL P+ ++Y + ++G
Sbjct: 471 QMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Query: 360 KMQESKSLLYEM 371
+ + + LY++
Sbjct: 531 FVPDIEGHLYKV 542
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 207/421 (49%), Gaps = 17/421 (4%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELV---ELVKDCPHSVDVFQDLISCTEDCNWA 179
K T +YC++ HIL + A ++L E+V +KDC DVF L S C
Sbjct: 7 KHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDC----DVFDVLWSTRNVCVPG 62
Query: 180 Y----------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+ ++ + E+ + F K P SCN LL+ +L D + ++
Sbjct: 63 FGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFK 122
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M G P T+NI+ CK GD++ +G E+++ G PD VTYN++I Y K G
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
RL+D Y + M + PD++TY TL+N CK GK+ + + F M GL P++VSY+
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
TL+ A+CKE MQ++ +M G+ P+ T +V Y K G L A L E+ +
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV 302
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
GV + Y LI LC R A L ++ G +P+L Y L+ K ++ A
Sbjct: 303 GVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRA 362
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L L DEM R IKP L Y I CG+ + A +M+EM E G+ ++ I L++
Sbjct: 363 LELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422
Query: 530 Y 530
Y
Sbjct: 423 Y 423
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 178/359 (49%), Gaps = 8/359 (2%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C V + LI+C + K G + + + FR+ G +P++VS + L++ K
Sbjct: 199 CEPDVITYNTLINC-------FCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKE 251
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ + Q + Y +M R+G+ PN HT+ L +CK G++ +++ + G + ++VTY
Sbjct: 252 DMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTY 311
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
LI C R+ +A L+ M V+P+L +YT L++G K + A +L M
Sbjct: 312 TALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKG 371
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD++ Y T I++ C K++ +K ++ EM GI +TF ++ Y K
Sbjct: 372 RGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSE 431
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD-GYVPSLEIYNELM 457
L+L+ E+ + ++ + LI LC++ A RI D G + IY ++
Sbjct: 432 GLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMI 491
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LCK D V A L ++M + + P + Y +LI G +A++L D+M E G+
Sbjct: 492 DGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 181/365 (49%), Gaps = 1/365 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + ++ F + + +P +++ N L+N K + + + + EM + G+ P
Sbjct: 177 GYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKP 236
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +++ L FCK + + F + G P+ TY +L+ +YCK G L+DAF L
Sbjct: 237 NVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLA 296
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + V ++VTYT L++GLC +++EA +LF +MV G+ P++ SY LI + K
Sbjct: 297 DEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKA 356
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M + LL EM G GI PD + ++ +A ++ E+Q G+ + IY
Sbjct: 357 KNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIY 416
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV- 477
L+ A + P LLE + + + + L++ LCK V+ A+ +
Sbjct: 417 TTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN 476
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
D ++ + + Y A+I C + A +L ++M + G++PD LI+G + +V
Sbjct: 477 DFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVV 536
Query: 538 KAEAL 542
+A AL
Sbjct: 537 QALAL 541
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 255/558 (45%), Gaps = 64/558 (11%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL----- 152
++R Q+D ++AL FN VK + K T Y ++ L + KF +L E+
Sbjct: 12 AVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVD 71
Query: 153 --------VELVKD------CPHSVDVFQ--DLISCTEDCNWAY-------VKVGLIRES 189
+ +++D +V+VF+ D C E +Y V+ G ++
Sbjct: 72 SKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDC-EPSVQSYNAIMNILVEYGYFSQA 130
Query: 190 FKTFRKTLDVGFQPSIVS----------------------------CNF-------LLNG 214
K + + D+G P + + C F +++G
Sbjct: 131 HKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISG 190
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
K NC + + +++EM + GICP+ TFN L HV CK G+V + K+ + G P+
Sbjct: 191 FYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPN 250
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
L T+N I C+KG +++A L + + PD+++Y TL+ G CK K+ EA H
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+MV+ G+ P+ +YNT+I +CK G MQ + +L + M G PD FT ++ G +G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ A+ + E G S +Y+ L+ L + A L++ + + G P + YN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
++ LCK ++DA + ++ + + P + T+ LI +C +A+ ++D ML
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+ PD L+NG C + ++ +K + +YN + F +D +S+
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 575 MELQKRFLRLGFAPNNLT 592
MEL K G P+ +T
Sbjct: 551 MELFKEMKTRGLTPDIVT 568
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 176/337 (52%), Gaps = 1/337 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + F + ++ GF+ SI+ N L+ GL K + Q Q+ ++M G P+ T+
Sbjct: 370 GDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTY 429
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ + CK G + NG L +G PD+ T+NTLI YCK+ ++ A + M
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD++TY TL+NGLCK K+ F M+ +G +P+I++YN LI ++CK+ K+ E
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDIYDYLI 422
+ L EM G+ PD T ++ G G L A L V +++ + S S I++ +I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A C A L ++G P Y +++S CK ++ A E + + +
Sbjct: 610 NAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
PS +T ++ C C R EAV +++ M+++G++P+
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 210/455 (46%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ES K F K + G P++ + N + GL + ID+ ++ E + G+ P+
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++N L FCK+ + + +L K+ G +P+ TYNT+I+ +CK G + +A + R
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ +PD TY++L+NGLC K+G V
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A QL M+ G SPDI +YN ++ CK G + ++ +L + + G PD FT +
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K+ + A+ ++ + G++ Y+ L+ LC+ + + + + G
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN L+ES CK V++A+ L EM R + P + T LIC C G +A
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 507 LMDEM-LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L + E + I ++IN +C + +V+ AE L D +Y + + +
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ + G P+ TC +++ L
Sbjct: 648 CKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCL 682
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
TF+ L+ G P+I++ N L+ K + + ++++EM G+ P+ T L C
Sbjct: 518 TFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLC 577
Query: 252 KNGDVDKVNGFLEKIEEE----------------------------------GFD--PDL 275
NG++DK IE+E G D PD
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDN 637
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
TY +I SYCK G ++ A + ++P T ++N LC ++ EA + +
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINL 697
Query: 336 MVHRGLSPDIVS 347
MV G+ P+ V+
Sbjct: 698 MVQNGIVPEEVN 709
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 198/378 (52%), Gaps = 1/378 (0%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R G+ PN +T+NIL C G +++ G + + G P+ VTYNTL++++C+ G
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 291 LNDAFYLYRIMYRR-NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
L+ A + +M N P+LVT+ +++NGLCK G++ A ++F MV GL+PD+VSYN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
TL+ YCK G + ES ++ EM G+ PD T ++ K G L A+ LV +++
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ ++ + LI C+ A +E + + G PS+ YN L+ CK + A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L EM + +KP + TY +I +C +G A L +ML+ G+LPD+ LI G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C EK +N A L + D +Y + + ++G++ K + L +R G P+
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 590 NLTCKYMIHSLWKGMERK 607
+T +I+ L K K
Sbjct: 361 VVTYSVLINGLSKSARTK 378
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 201/393 (51%), Gaps = 1/393 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++ + N L+ L +++ V +M G PN T+N L FC+ G++D
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 260 NGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ + EEG P+LVT+N++++ CK GR+ A ++ M R + PD+V+Y TL++
Sbjct: 65 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK G + E+ +F M RGL PD+V++ +LI A CK G ++++ +L+ +M G+
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ G+ K+G L AL V E+++ G+ S Y+ LI C+ R A L+
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ P + Y+ ++ CK ++ A L +M+ + + P TY +LI C
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R +A L + ML+ G+ PD LI+G+C E +V KA +L +K + D +Y
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ + N ++ + L + P+N+
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNI 397
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/499 (27%), Positives = 235/499 (47%), Gaps = 29/499 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC---TEDCNW 178
+ P Y ++V L + A+ ++ ++ C + + L++ + +
Sbjct: 6 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRG--AGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A V L+RE +P++V+ N ++NGL K ++ +V++EM R G+ P
Sbjct: 64 AERVVSLMREEGNA---------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 114
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++N L +CK G + + ++ + G PD+VT+ +LI + CK G L A L
Sbjct: 115 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 174
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + + VT+T L++G CK+G + +A M G+ P +V YN LI YCK
Sbjct: 175 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 234
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M ++ L+ EM + PD T I+ GY K G L SA L ++ + GV Y
Sbjct: 235 GRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 294
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ R A L E + Q G P Y L++ CK +V AL L DEM+
Sbjct: 295 SSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 354
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS------QIC--------- 523
+ + P + TY LI R+ EA L+ ++ +PD+ +C
Sbjct: 355 KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 414
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ G+CM+ + +A+ + + D Y+ + + G++ K + K+ LR
Sbjct: 415 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 474
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF+PN+ + ++ L++
Sbjct: 475 SGFSPNSTSTISLVRGLFE 493
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 220/459 (47%), Gaps = 50/459 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + K F + + G P +VS N LL+G K+ C+ + V+ EM + G+ P+
Sbjct: 93 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 152
Query: 242 TFNILTHVFCKNGDVDK-----------------------VNGF------------LEKI 266
TF L H CK G++++ ++GF +E++
Sbjct: 153 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 212
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ G P +V YN LI+ YCK GR++ A L R M + V PD+VTY+T+++G CK G +
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 272
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A QL +M+ +G+ PD ++Y++LI C+E ++ ++ L M+ G+ PD FT +
Sbjct: 273 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 332
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL+L E+ R GV Y LI L + R A LL ++ +
Sbjct: 333 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392
Query: 447 VPSLEIYNELMESLCKCDSVADALLLK---------------DEMVDRNIKPSLSTYRAL 491
VP Y+ LM K + + LLK M+DRN K S Y L
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C G +A+S +ML SG P+S L+ G E V +A+ +
Sbjct: 453 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 512
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ D E+ A+ ++ ++G++ L+++ R G P++
Sbjct: 513 LADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 551
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 267/572 (46%), Gaps = 30/572 (5%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVL--LRCQSDSVSA 109
LP P + S+ S+ +L K L+PHL H+ V +R + +A
Sbjct: 103 LPSQNQPPSSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTA 162
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE-----LVKDCPHSVD 164
L FF + + + T +YC+++ L + S A +L L++ L D P +
Sbjct: 163 LNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGD-PKNRH 221
Query: 165 VFQDLISCTEDCN------WAYVKVGLI-------------RESFKTFRKTLDVGFQPSI 205
+ ++ S D N A V L+ R + FR + G P++
Sbjct: 222 I--EIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTV 279
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+C FLL+ L+K N +++ + V+E M R G+ P+ + F+ + FCK G V+
Sbjct: 280 KTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFD 338
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+E+ G P++VTYN LI CK G L++AF M + V L+TY+ L+NGL K K
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA+ + + +G +P+ V YNTLI YCK G + ++ + +M+ GI P++ T
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
I+QG+ K G++ A ++ E+ G SI+ + +I LC ++R +A L +
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+ + L+ LCK +DA+ L ++++ +L T ALI C G EAV
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ +MLE G + D LI+G C E V + L G K+ DT +YN + +
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
G L + + L PN T MI
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 222/487 (45%), Gaps = 44/487 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ T Y ++++ L KF+ A +L E +E P+ V V+ LI Y
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLE-KGFTPNEV-VYNTLID-------GYC 429
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ + + G P+ V+ N ++ G K+ ++Q + EEM G N
Sbjct: 430 KMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG 489
Query: 242 TFNILTHVFCKNGDVDKVNGFLE-----------------------------------KI 266
F + H C N + FL ++
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 549
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E+GF +LVT N LI CK G + +A L + M R + D +TY TL++G CKEGKV
Sbjct: 550 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 609
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E +L MV +G+ PD +YN LI C+ GK+ E+ +L E + P+ +T ++
Sbjct: 610 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 669
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K ++ L EL + ++ +Y+ LI A C++ A L + + G
Sbjct: 670 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 729
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P+ Y+ L+ +C + DA L DEM + P++ Y ALI +C +G+ + V+
Sbjct: 730 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 789
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ EM + P+ V+I+GY D+ A LL K + DT +YN + N F
Sbjct: 790 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 849
Query: 567 EDGDLSK 573
++G + +
Sbjct: 850 KEGKIEE 856
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 213/451 (47%), Gaps = 43/451 (9%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K+ E+ ++TL+ GF P+ V N L++G K+ + ++ +M GI PN+
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T N + FCK G +++ LE++ GF + + T+I C R A R
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGK----------------------------------- 325
M RN+ P+ TTL+ GLCKEGK
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
++EA +L +M+ RG D ++YNTLI CKEGK++E L EM+ GI PDTFT +
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 633
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + G+L A+NL E + + + Y +I C+ ++ L +
Sbjct: 634 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 693
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ +YN L+ + C+ + +A L D+M + I P+ +TY +LI C IGR +A
Sbjct: 694 LELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAK 753
Query: 506 SLMDEMLESGMLPDSQICRVLINGYC----MEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
L+DEM + G+LP+ LI GYC M+K VN + + + +I +Y +
Sbjct: 754 CLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI----TYTVM 809
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ +++ GD+ +L + G P+ +T
Sbjct: 810 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 185/371 (49%), Gaps = 4/371 (1%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + R+ L +P+ L+ GL K +++ + G N T N L H
Sbjct: 507 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIH 566
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G++ + L+K+ E GF D +TYNTLIS CK+G++ + F L M ++ + P
Sbjct: 567 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 626
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D TY L++G+C+ GK+ EA L++ R L P++ +Y +I YCK K++E + L
Sbjct: 627 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 686
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
E++ + ++ +++ Y + G + A L +++ G+ + Y LI +C
Sbjct: 687 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI 746
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A L++ + ++G +P++ Y L+ CK + + + EM +I P+ TY
Sbjct: 747 GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 806
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK----AEALLG 544
+I + G A L+ EM+ G++PD+ VL NG+C E + + AE +G
Sbjct: 807 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAEDGVG 866
Query: 545 FFAKKFQIYDT 555
F + F I++
Sbjct: 867 FNSPLFLIHEA 877
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 179/392 (45%), Gaps = 27/392 (6%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELV----------------ELVKDCPHSVDV------- 165
+ I+H L N++F A++ L E++ L K+ HS V
Sbjct: 491 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 550
Query: 166 ---FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
F + T K G ++E+ + +K L+ GF ++ N L++G K ++
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ +++ EM + GI P+T T+N+L H C+ G +D+ + + P++ TY +I
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YCK ++ + L+ + +N+ + V Y TL+ C+ G EA +L M +G+
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIP 730
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P +Y++LI C G+M+++K L+ EM G+ P+ ++ GY K G++ +N+
Sbjct: 731 PTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNV 790
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E+ + + ++ Y +I + A LL + G VP YN L CK
Sbjct: 791 LQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 850
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + LL ++ V N P + A C
Sbjct: 851 EGKIEEGKLLAEDGVGFN-SPLFLIHEAFRAC 881
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 130/254 (51%), Gaps = 13/254 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKML--CELVELVKDCPHSVDVFQDLISCTEDCNWA 179
I+P + Y L++H + K A+ + C+ +LV + ++ V D
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV-YTYGVMID----------G 672
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K I E K F + L + + V N L+ + + ++++++M GI P
Sbjct: 673 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 732
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T++ L H C G ++ ++++ +EG P++V Y LI YCK G+++ + +
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 792
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M ++ P+ +TYT +++G K G ++ A +L H MV +G+ PD V+YN L +CKEG
Sbjct: 793 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 852
Query: 360 KMQESKSLLYEMMG 373
K++E K L + +G
Sbjct: 853 KIEEGKLLAEDGVG 866
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 268/578 (46%), Gaps = 30/578 (5%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVL--LRCQSDSVSA 109
LP P + S+ S+ +L K L+PHL H+ V +R + +A
Sbjct: 36 LPSQNQPPSSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTA 95
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE-----LVKDCPHSVD 164
L FF + + + T +YC+++ L + S A +L L++ L D P +
Sbjct: 96 LNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGD-PKNRH 154
Query: 165 VFQDLISCTEDCN------WAYVKVGLI-------------RESFKTFRKTLDVGFQPSI 205
+ ++ S D N A V L+ R + FR + G P++
Sbjct: 155 I--EIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTV 212
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+C FLL+ L+K N +++ + V+E M R G+ P+ + F+ + FCK G V+
Sbjct: 213 KTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFD 271
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+E+ G P++VTYN LI CK G L++AF M + V L+TY+ L+NGL K K
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA+ + + +G +P+ V YNTLI YCK G + ++ + +M+ GI P++ T
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
I+QG+ K G++ A ++ E+ G SI+ + +I LC ++R +A L +
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+ + L+ LCK +DA+ L ++++ +L T ALI C G EAV
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ +MLE G + D LI+G C E V + L G K+ DT +YN + +
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
G L + + L PN T MI K
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 609
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 234/516 (45%), Gaps = 45/516 (8%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ T Y ++++ L KF+ A +L E +E P+ V V+ LI Y
Sbjct: 312 VNATLITYSVLINGLMKLEKFNEANSVLKETLE-KGFTPNEV-VYNTLID-------GYC 362
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ + + G P+ V+ N ++ G K+ ++Q + EEM G N
Sbjct: 363 KMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG 422
Query: 242 TFNILTHVFCKNGDVDKVNGFLE-----------------------------------KI 266
F + H C N + FL ++
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E+GF +LVT N LI CK G + +A L + M R + D +TY TL++G CKEGKV
Sbjct: 483 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E +L MV +G+ PD +YN LI C+ GK+ E+ +L E + P+ +T ++
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 602
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K ++ L EL + ++ +Y+ LI A C++ A L + + G
Sbjct: 603 IDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P+ Y+ L+ +C + DA L DEM + P++ Y ALI +C +G+ + V+
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVN 722
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ EM + P+ V+I+GY D+ A LL K + DT +YN + N F
Sbjct: 723 VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFC 782
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + + ++ + G + +T ++H W+
Sbjct: 783 KEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG-WQ 817
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 242/534 (45%), Gaps = 62/534 (11%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILA----WNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
FF+ K L + P Y ++H L + F F KM VKD V
Sbjct: 269 FFDMEK--LGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM-------VKD-----GVNA 314
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ + N +K+ E+ ++TL+ GF P+ V N L++G K+ + ++
Sbjct: 315 TLITYSVLIN-GLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 373
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M GI PN+ T N + FCK G +++ LE++ GF + + T+I C
Sbjct: 374 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK---------------------- 325
R A R M RN+ P+ TTL+ GLCKEGK
Sbjct: 434 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 493
Query: 326 -------------VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
++EA +L +M+ RG D ++YNTLI CKEGK++E L EM+
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
GI PDTFT +++ G + G+L A+NL E + + + Y +I C+ ++
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 613
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
L + + +YN L+ + C+ + +A L D+M + I P+ +TY +LI
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC----MEKDVNKAEALLGFFAK 548
C IGR +A L+DEM + G+LP+ LI GYC M+K VN + + +
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+I +Y + + +++ GD+ +L + G P+ +T + + K
Sbjct: 734 PNKI----TYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCK 783
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 189/384 (49%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + R+ L +P+ L+ GL K +++ + G N T N L H
Sbjct: 440 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIH 499
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G++ + L+K+ E GF D +TYNTLIS CK+G++ + F L M ++ + P
Sbjct: 500 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 559
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D TY L++G+C+ GK+ EA L++ R L P++ +Y +I YCK K++E + L
Sbjct: 560 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 619
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
E++ + ++ +++ Y + G + A L +++ G+ + Y LI +C
Sbjct: 620 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI 679
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A L++ + ++G +P++ Y L+ CK + + + EM +I P+ TY
Sbjct: 680 GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 739
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I + G A L+ EM+ G++PD+ VL NG+C E + + + + ++
Sbjct: 740 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQ 799
Query: 549 KFQIYDTESYNAVFNMFAEDGDLS 572
+ D +Y + + + + L+
Sbjct: 800 EGLPLDEITYTTLVHGWQQPSALT 823
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 13/277 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKML--CELVELVKDCPHSVDVFQDLISCTEDCNWA 179
I+P + Y L++H + K A+ + C+ +LV + ++ V D
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNV-YTYGVMID----------G 605
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K I E K F + L + + V N L+ + + ++++++M GI P
Sbjct: 606 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 665
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T++ L H C G ++ ++++ +EG P++V Y LI YCK G+++ + +
Sbjct: 666 TATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M ++ P+ +TYT +++G K G ++ A +L H MV +G+ PD V+YN L +CKEG
Sbjct: 726 EMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 785
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
K++E + M G+ D T +V G+ + L
Sbjct: 786 KIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 13/174 (7%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVFQDLISCTEDCNWA 179
I PT++ Y ++H + + A C + E+ K+ P+ V C
Sbjct: 662 IPPTTATYSSLIHGMCNIGRMEDAK---CLIDEMRKEGLLPNVV--------CYTALIGG 710
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+G + + ++ P+ ++ +++G K + ++ EM GI P+
Sbjct: 711 YCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPD 770
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
T T+N+LT+ FCK G +++ + + +EG D +TY TL+ + + L +
Sbjct: 771 TVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSALTN 824
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 155/587 (26%), Positives = 248/587 (42%), Gaps = 107/587 (18%)
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
K LL HL HE + L S++V+ T FN+ F
Sbjct: 78 KQLLLHLSPHEFDQCFLAIGSNNVNPRTAFNF--------------------------FH 111
Query: 144 FAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
FA + L E P DL+ + ++ G++ F+ F + G P
Sbjct: 112 FASETLFE--------PAVAVTVVDLLIHVYSTQFKHLGFGVV---FELFSLLANKGLFP 160
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
S+ +CNFLL+ L+K N + +QV++ M G+ P+ + F+ + + FC G VD
Sbjct: 161 SLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELF 220
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
K+E+ G P++VTYN +I CK GRL++AF M + V P LVTY L+NGL K
Sbjct: 221 RKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKL 280
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+ EA+ + M RG +P+ V YNTLI YC+ G + + + +M+ NGI P++ TC
Sbjct: 281 ERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTC 340
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY------------------------- 418
++QGY K ++ A +L+ E+ G I++ +
Sbjct: 341 NSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLL 400
Query: 419 ----------DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS--- 465
L+ LCQ+ + A L R+ + G+ + N L+ LC+ S
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460
Query: 466 --------------------------------VADALLLKDEMVDRNIKPSLSTYRALIC 493
V + LK+EMV R I+P + TY L+
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +G+ EA L E ++G PD+ ++I+GYC V + E L
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ Y + + E+G++ + L+ G + T +IH L
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGL 627
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 234/516 (45%), Gaps = 44/516 (8%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP+ Y ++++ L +F A +L E+ + P++V V+ LI Y
Sbjct: 263 VKPSLVTYGVLINGLVKLERFDEANCILKEMSDR-GYAPNNV-VYNTLID-------GYC 313
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G I + + + G P+ V+CN L+ G K N ++ + EEM G N
Sbjct: 314 RIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQG 373
Query: 242 TFNILTHVFC-----------------------------------KNGDVDKVNGFLEKI 266
TF + H C +NG + ++
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E+GF + VT N LI C+ G +A L + M R ++ D ++Y TL+ CKEGKV
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E +L MV RG+ PD+ +YN L+ C GK++E+ L +E NG +PD +T I+
Sbjct: 494 EEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIM 553
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K R+ L E+ + + +Y LI A C++ A L + + G
Sbjct: 554 IDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGI 613
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ Y+ L+ L V A L DEM + P++ Y ALI +C +G+ + S
Sbjct: 614 PQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ EM + + P+ ++ING+C ++ A LL A+K + D +YNA+ N F
Sbjct: 674 ILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFC 733
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + + +++ G + +++T +I K
Sbjct: 734 KEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 136/520 (26%), Positives = 227/520 (43%), Gaps = 52/520 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNK----FSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+ P Y I+H L N + F F KM E V+ S+ + LI+
Sbjct: 228 VAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVK------PSLVTYGVLIN------ 275
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
VK+ E+ ++ D G+ P+ V N L++G ++ I Q+ ++M GI
Sbjct: 276 -GLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGIS 334
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN+ T N L +CK+ ++ LE++ G + T+ ++I C K R + A
Sbjct: 335 PNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLF 394
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR---------------------- 335
M RN P+ T L++GLC+ GK EA +L++R
Sbjct: 395 IMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCE 454
Query: 336 -------------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
M+ RGL D +SYNTLI A CKEGK++E L EM+ GI PD +T
Sbjct: 455 AGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYT 514
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ G G++ A L E ++ G Y +I C+ NR L + +
Sbjct: 515 YNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMV 574
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ +Y L+ + C+ ++ +A L+D+M R I + +TY +LI IG
Sbjct: 575 TMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVD 634
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A L+DEM + G+ P+ LI GYC ++K +++L + + +Y +
Sbjct: 635 SANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMI 694
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + G++ +L + G P+ +T + + K
Sbjct: 695 NGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCK 734
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 179/398 (44%), Gaps = 12/398 (3%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
I R+ L+C+ DS ++N KP L+V L N K S A+++ L+E
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRN---FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLE 435
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
K + LI + G E+ K ++ L+ G +S N L+
Sbjct: 436 --KGFAANTVTSNALIH-------GLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILA 486
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
K +++ +++ EEM R GI P+ +T+N+L H C G +++ G + ++ G PD
Sbjct: 487 CCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPD 546
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
TY +I YCK R+ + L++ M + + V Y TL+ C+ G +REA +L
Sbjct: 547 AYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRD 606
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M RG+ +Y++LI G + + LL EM G+ P+ ++ GY K G
Sbjct: 607 DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLG 666
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
++ +++ E+ V ++ Y +I C+ AA LL + Q G VP YN
Sbjct: 667 QMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYN 726
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
L CK + +AL + D M I TY LI
Sbjct: 727 ALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 252/542 (46%), Gaps = 35/542 (6%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
L+ LKP A + VL+ ++D L+FF W L P+ C++ I
Sbjct: 81 LRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWAC--LRRDPSLEARCIVAQIATA 138
Query: 139 NNKFSFAMKMLC-------------------ELVELVKDC---PHSVDVFQDLISCTEDC 176
+ A K++ +L+ KD P D+F ++
Sbjct: 139 SKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVL------ 192
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-LNCIDQCWQVYEEMGRIG 235
V+ G++ E+ K F K L+ G S+ SCN ++ L + L+ I +V+ E +G
Sbjct: 193 ----VEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVG 248
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+C NT ++NI+TH C+ G V + + L ++E G PD+++Y+T+I+ YC+ G L
Sbjct: 249 VCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVL 308
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + + P+ TY ++ LCK GKV EA ++ M+ G++PD V Y TLI +
Sbjct: 309 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 368
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK G + + L EM I PD T ++ G + GR++ A L E+ +
Sbjct: 369 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 428
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI C++ + A SL ++ Q G P++ Y L + LCKC V A L E
Sbjct: 429 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + ++ ++ TY +L+ C G +AV LM +M +G PD+ L++ YC ++
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ +A LL + ++N + N F G L +L K L G PN T
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608
Query: 596 MI 597
+I
Sbjct: 609 LI 610
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 217/411 (52%), Gaps = 3/411 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G + E+ + + G P ++S + ++NG ++ + + ++ EEM G+ PN +
Sbjct: 265 QLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPY 324
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + + CK G V + L ++ EG PD V Y TLI +CK G ++ A+ L+ M
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 384
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R + PD +TYT ++ GLC+ G+V EA +LFH MV + L PD V+Y LI YCKEGKM
Sbjct: 385 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 444
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ SL +M+ G+ P+ T + G K G + +A L+ E+ R G+ ++ Y+ L
Sbjct: 445 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 504
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ A L++ + G+ P Y LM++ CK + A L +M+DR +
Sbjct: 505 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 564
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ T+ L+ FC G + L+ MLE G++P++ LI YC+ ++
Sbjct: 565 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 624
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ K + D +YN + + ++ + L + + GF NLT
Sbjct: 625 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF---NLT 672
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 220/464 (47%), Gaps = 9/464 (1%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL 185
+++Y +I H L + A ++L ++ EL P D+IS + N Y +VG
Sbjct: 253 TASYNIITHSLCQLGRVVEAHQLLLQM-ELRGCIP-------DVISYSTVIN-GYCQVGE 303
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++ K + G +P+ + N ++ L K + + +V EM GI P+ +
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L FCK G+V +++++ PD +TY +I C+ GR+ +A L+ M +
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD VTYT L++G CKEGK++EA L ++M+ GL+P+IV+Y L CK G++ +
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL+EM G+ + +T +V G K G + A+ L+ +++ G Y L+ A
Sbjct: 484 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 543
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ A LL ++ P++ +N LM C + D L M+++ I P+
Sbjct: 544 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 603
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+TY +LI +C + M G++PD +LI G+C +++ +A L
Sbjct: 604 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 663
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
K SYNA+ F + + EL ++ R G +
Sbjct: 664 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 707
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 191/396 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + R+ + G P V L++G KL + +++++EM + I P+
Sbjct: 335 KTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFI 394
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ G V + + ++ + +PD VTY LI YCK+G++ +AF L+ M
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTYT L +GLCK G+V A++L H M +GL +I +YN+L+ CK G +
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L+ +M G +PD T ++ Y K ++ A L+ ++ + + ++ L
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C LL+ + + G +P+ YN L++ C +++ + M + +
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L +M+ G LI G+ K +A
Sbjct: 635 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 694
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L ++ + D E YN ++ ++G + +EL
Sbjct: 695 LFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 202/423 (47%), Gaps = 19/423 (4%)
Query: 33 LQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA 92
L++I++ + K L Y + N ++ L+C + K ++ L + + + P G
Sbjct: 308 LKLIEEMQIKGLKPNPYTY-------NGVILLLCKTGKVAEAERVLREMISEGIAPD-GV 359
Query: 93 HEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
+ + C+ +VS A F+ ++ +I P Y ++ L + A K+ E
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKR-KISPDFITYTAVICGLCQTGRVMEADKLFHE 418
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+V K + LI Y K G ++E+F + L +G P+IV+ L
Sbjct: 419 MV--CKRLEPDEVTYTALID-------GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+GL K +D ++ EM R G+ N +T+N L + CK G++D+ ++ +E GF
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD VTY TL+ +YCK + A L R M R + P +VT+ LMNG C G + + +
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L M+ +G+ P+ +YN+LI YC M+ + + M G+ PD T I+++G+
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K + A L ++ G +++ Y+ LI + + A L E++ ++G V E
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709
Query: 452 IYN 454
IYN
Sbjct: 710 IYN 712
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ + K + L+ G P+ + N L+ N + ++Y M G+ P+ +T+
Sbjct: 582 GMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTY 641
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL CK ++ + + +GF+ + +YN LI + K+ + +A L+ M R
Sbjct: 642 NILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 701
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
++ D Y + EGK+ +L + + L DI + NT
Sbjct: 702 EGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK-CDSVADALLLKDE 475
++D L + A L +++ G + S++ N + L + D + AL + E
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ + + ++Y + C +GR EA L+ +M G +PD +INGYC +
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ + L+ K + +YN V + + G +++ + + + G AP+ +
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363
Query: 596 MIHSLWK 602
+I K
Sbjct: 364 LIDGFCK 370
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 257/568 (45%), Gaps = 52/568 (9%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
L+ LKP + VL++ + D L FF+W ++ + S C+++H+
Sbjct: 497 LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLES--LCIVIHLAVA 554
Query: 139 NNKFSFAMKMLCELVELVK-DCPHSVDVFQDLISCTEDCNWA------------YVKVGL 185
+ A ++ E K + S F DL+ T +W V+ G+
Sbjct: 555 SKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYK-DWGSDPRVFDVFFQVLVEFGM 613
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-LNCIDQCWQVYEEMGRIGICPNTHTFN 244
+ E+ K F K L+ G S+ SCN L L K N V+ E +G+C N ++N
Sbjct: 614 LPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYN 673
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I+ H C+ G +++ + L +E +G+ PD+++Y+T+I+ YC+ G L+ + L M ++
Sbjct: 674 IVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQK 733
Query: 305 N-----------------------------------VLPDLVTYTTLMNGLCKEGKVREA 329
+LPD + YTTL++G CK G +R A
Sbjct: 734 GLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAA 793
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ F+ M R ++PD+++Y +I +C+ G M E+ L +EM+ G+ PD T ++ G
Sbjct: 794 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNG 853
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K G + A + + + G S + Y LI LC++ +A LL + + G P+
Sbjct: 854 YCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 913
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN ++ LCK ++ +A+ L E + TY L+ +C G +A ++
Sbjct: 914 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILT 973
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EML G+ P VL+NG+C+ + E LL + K + ++N + +
Sbjct: 974 EMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRN 1033
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L + K G P+ T + ++
Sbjct: 1034 NLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 229/477 (48%), Gaps = 9/477 (1%)
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
++Y +++H + + + A +L L+EL P D+IS + N Y + G +
Sbjct: 670 ASYNIVIHFVCQLGRINEAHHLLL-LMELKGYTP-------DVISYSTVIN-GYCRFGEL 720
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ +K K G +P+ + ++ L ++ + + + + EM GI P+T + L
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
FCK GD+ + F ++ PD++TY +IS +C+ G + +A L+ M R +
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD++T+T LMNG CK G +++A ++ + M+ G SP++V+Y TLI CKEG + +
Sbjct: 841 EPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 900
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL+EM G+ P+ FT IV G K G + A+ LV E + G++ Y L+ A C
Sbjct: 901 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A +L + G P++ +N LM C + D L + M+ + I P+ +
Sbjct: 961 KSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1020
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
T+ L+ +C A ++ +M G+ PD + L+ G+C +++ +A L
Sbjct: 1021 TFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEM 1080
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K +Y+ + F + + E+ + R G A + + + +KG
Sbjct: 1081 KGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKG 1137
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 180/428 (42%), Gaps = 53/428 (12%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P + I+ L+C K ++ + + +LP + + V C+ + A +
Sbjct: 737 PNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVY-TTLVDGFCKRGDIRAASK 795
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK----MLCELVELVKDCPHSVDVFQD 168
F + + +I P Y I+ A K MLC +E D
Sbjct: 796 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLE------------PD 843
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I+ TE N Y K G I+++F+ + G P++V+ L++GL K +D ++
Sbjct: 844 IITFTELMN-GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 902
Query: 229 EEMGRIGICPNTHTFN-----------------------------------ILTHVFCKN 253
EM +IG+ PN T+N L +CK+
Sbjct: 903 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 962
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G++DK L ++ +G P +VT+N L++ +C G L D L M + + P+ T+
Sbjct: 963 GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
L+ C ++ A ++ M RG+ PD +Y L+ +C M+E+ L EM G
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKG 1082
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G T ++++G+ K + + A + +++R G++ ++I+D+ + RP
Sbjct: 1083 KGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDT 1142
Query: 434 ATSLLERI 441
++ I
Sbjct: 1143 IVDPIDEI 1150
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK-CDSVADALLLKDE 475
++D L + A + E++ G V S++ N + L K C+ A A+++ E
Sbjct: 600 VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ + ++++Y +I C +GR EA L+ M G PD +INGYC +
Sbjct: 660 FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
++K L+ +K ++ +Y ++ + L++ E + G P+ +
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779
Query: 596 MIHSLWK 602
++ K
Sbjct: 780 LVDGFCK 786
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 224/448 (50%), Gaps = 17/448 (3%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
L P L +I +LL+ Q+D+V +L FFNWV+ T + ++HIL N F
Sbjct: 59 LTPFSKTLTPFKIQHILLKLQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNF 118
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKT 192
A + +++ + ++F+ L+ CN + + + +R + T
Sbjct: 119 KTAQSIFSKIITT------NSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDT 172
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F K + GF P++ SCN L+ +L L + Y +M R I PN +T N++ +CK
Sbjct: 173 FVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCK 232
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLV 311
G+++K + LEK+++ G P++VT+N+LIS YC KG L A + +M +N V P++V
Sbjct: 233 LGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVV 292
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
T+ TL+NG CKEGK+ EA+++F M ++P++V+YNTLI + + G + L EM
Sbjct: 293 TFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEM 352
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
N + D T ++ G KEG+ A +V EL + + + + LI C N
Sbjct: 353 ERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNS 412
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A + + + G+ P+ + L + CK + A+ + +M++R + P S +
Sbjct: 413 ERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEV 472
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPD 519
C GR A+ L E+ +LP
Sbjct: 473 YSGLCRCGRKQFALMLCSEIEAKRLLPQ 500
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 156/324 (48%), Gaps = 5/324 (1%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS--YCKKGRLNDAFYLYRI 300
F+ L F + K++E GF P + + N +SS Y K+ L +FY R
Sbjct: 153 FDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFY--RQ 210
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + P++ T +++ CK G++ +A ++ +M GL P++V++N+LI YC +G
Sbjct: 211 MRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGL 270
Query: 361 MQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + + MMG NG++P+ T ++ G+ KEG+L A + E++ V+ + Y+
Sbjct: 271 LGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYN 330
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI Q L E + ++ + YN L+ LCK A + E+
Sbjct: 331 TLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKG 390
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P+ ST+ ALI C S A + M+ SG P+ R+L + +C +D + A
Sbjct: 391 NLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGA 450
Query: 540 EALLGFFAKKFQIYDTESYNAVFN 563
+L ++F D+ + V++
Sbjct: 451 VQVLRDMLERFMTPDSSILSEVYS 474
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 114/276 (41%), Gaps = 47/276 (17%)
Query: 151 ELVELVKD---CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIV 206
E++E +KD CP+ V F LIS Y GL+ + K + G P++V
Sbjct: 241 EVLEKMKDMGLCPNVV-TFNSLIS-------GYCDKGLLGLALKVRDLMMGKNGVFPNVV 292
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L+NG K + + +V+ EM + PN T+N L + F + G+ + G E++
Sbjct: 293 TFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEM 352
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYL----------------------------- 297
E D++TYN LI CK+G+ A Y+
Sbjct: 353 ERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNS 412
Query: 298 ------YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
YR M R P+ T+ L + CK A Q+ M+ R ++PD + +
Sbjct: 413 ERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEV 472
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
C+ G+ Q + L E+ + P F + IV
Sbjct: 473 YSGLCRCGRKQFALMLCSEIEAKRLLPQGFDREKIV 508
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/462 (30%), Positives = 226/462 (48%), Gaps = 24/462 (5%)
Query: 74 SHLTLLQNDLKPLLP---HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYC 130
+H L+ +D K L HL + +LL+ Q D V +L FFNWV+ + T +
Sbjct: 38 AHSHLIHSDWKKLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFNWVQTENPSSHTLETHS 97
Query: 131 LIVHILAWNNKFSFAMKMLCE-LVELVKDCPHSVDVFQDLISCTEDCNWA---------- 179
+I+HIL N KF A +L LV+ D P + F+ ++ C+ +
Sbjct: 98 MILHILTKNRKFKSAELILKSVLVKGFIDLPDKL--FEAILYSYRMCDSSPRVFDSLFKT 155
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ R + TF + GF P++ SCN L+ LL L+ +D Y+EM R I PN
Sbjct: 156 LAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPN 215
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T N++ FCK+G ++K E++E G P+ +YNTLI YC+KG LN A L
Sbjct: 216 VYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKN 275
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + V ++VT+ +L++G CKEGK+ EA ++F M ++P+ ++YNTLI + + G
Sbjct: 276 SMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMG 335
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + L EM NG+ D T ++ G KEG+ A +V EL + + + +
Sbjct: 336 NSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFS 395
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C N A L + + + G P+ + +N L+ + CK + A L+ EM +R
Sbjct: 396 ALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFER 455
Query: 480 NIKPSLST----YRALICCFCGIGRSGEAVSLMDEMLESGML 517
P Y L CC G+ A+ L E+ M+
Sbjct: 456 CFTPGSDVLSEIYHGLCCC----GKEHLAMKLSSELKARHMM 493
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF P + + N +SS R++ A Y+ M R + P++ T +M CK GK+ +A
Sbjct: 176 GFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKA 235
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
Q+F M G+SP+ SYNTLI YC++G + + L M G+ + T ++ G
Sbjct: 236 VQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDG 295
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ KEG+L A + E++ V+ + Y+ LI Q L E + ++G
Sbjct: 296 FCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKAD 355
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L+ LCK A + E+ N+ P+ ST+ ALI C S A L
Sbjct: 356 ILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYK 415
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKA 539
M+ G P+ Q +L++ +C +D A
Sbjct: 416 SMVRIGCHPNEQTFNMLVSAFCKNEDFEGA 445
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 158/370 (42%), Gaps = 24/370 (6%)
Query: 238 PNTHTF---NILTHVFCKNGDVDKVNGFLEKIEEEGFD--PDLVTYNTLISSYCKKGRLN 292
P++HT +++ H+ KN L+ + +GF PD + + ++ SY R+
Sbjct: 88 PSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKL-FEAILYSY----RMC 142
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
D+ + +L L K R A F +M G P + S N +
Sbjct: 143 DS--------------SPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYL 188
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+ ++ + + EM I P+ +T ++++ + K G+L A+ + E++ G+S
Sbjct: 189 SSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGIS 248
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y+ LI+ C+ +A L + G ++ +N L++ CK + +A +
Sbjct: 249 PNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKV 308
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM N+ P+ TY LI +G S L +EM +G+ D LI G C
Sbjct: 309 FSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCK 368
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E KA ++ K+ + + +++A+ + + + +L K +R+G PN T
Sbjct: 369 EGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQT 428
Query: 593 CKYMIHSLWK 602
++ + K
Sbjct: 429 FNMLVSAFCK 438
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 236/496 (47%), Gaps = 15/496 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE C+ HIL + A +L EL + S VF
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLM---SGKSSFVF 109
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L++ CN Y++ G+I++S + FR GF PS+ +CN +L ++
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K W +EM + ICP+ TFNIL +V C G +K + ++K+E+ G+ P +V
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNT++ YCKKGR A L M + V D+ TY L++ LC+ ++ + + L M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
R + P+ V+YNTLI + EGK+ + LL EM+ G+ P+ T ++ G+ EG
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL + ++ G++ S Y L+ LC++ A R+ ++G Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + +A++L +EM I P + TY ALI FC +GR A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ I LI C + +A + + D ++N + + G +++ E
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 577 LQKRFLRLGFAPNNLT 592
+ G PN ++
Sbjct: 530 FMRCMTSDGILPNTVS 545
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 215/519 (41%), Gaps = 49/519 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +++ + K A ++L E++ H F LI ++
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT--FNALID-------GHI 344
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G +E+ K F G PS VS LL+GL K D Y M R G+C
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + CKNG +D+ L ++ ++G DPD+VTY+ LI+ +CK GR A + +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 302 YRRNVLPDLVTYTTLM-----------------------------------NGLCKEGKV 326
YR + P+ + Y+TL+ LCK GKV
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA + M G+ P+ VS++ LI Y G+ ++ S+ EM G +P FT +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
++G K G L A + L ++ +Y+ L+ A+C+ A SL + Q
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAV 505
+P Y L+ LC+ A+L E R N+ P+ Y + G+ +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++M G PD +I+GY + K LL + + +YN + + +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
++ D+S L + + G P+ LTC HSL G+
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTC----HSLVLGI 799
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 5/431 (1%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+W Y K G + + + G + + N L++ L + N I + + + +M + I
Sbjct: 236 HW-YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+N L + F G V + L ++ G P+ VT+N LI + +G +A
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ +M + + P V+Y L++GLCK + A + RM G+ ++Y +I C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ LL EM +GI PD T ++ G+ K GR +A +V + R G+S +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI C+ A + E + +G+ +N L+ SLCK VA+A M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I P+ ++ LI + G +A S+ DEM + G P L+ G C +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+AE L DT YN + + G+L+K + L ++ P++ Y
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS----YT 650
Query: 597 IHSLWKGMERK 607
SL G+ RK
Sbjct: 651 YTSLISGLCRK 661
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 201/432 (46%), Gaps = 3/432 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + + + + VG P+ + + L+ ++ C+ + ++YE M G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN+L CK G V + F+ + +G P+ V+++ LI+ Y G AF ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P TY +L+ GLCK G +REA + + + D V YNTL+ A CK
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
G + ++ SL EM+ I PD++T ++ G ++G+ + A+ E + R V ++ +
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + + + + A E++ G+ P + N +++ + + L EM
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++N P+L+TY L+ + + L ++ +G+LPD C L+ G C +
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L F + D ++N + + +G+++ +L K LG + + TC M+
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 866
Query: 598 HSLWKGMERKFQ 609
L + +FQ
Sbjct: 867 SVLNR--NHRFQ 876
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 193/455 (42%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +RE+ K + V V N LL + K + + ++ EM + I P+++
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 242 TFNILTHVFCKNGDV------------------DKV------NG------------FLEK 265
T+ L C+ G +KV +G F E+
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
++ G PD+VT N +I Y + G++ L M +N P+L TY L++G K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V + L+ ++ G+ PD ++ ++L+ C+ ++ +L + G+ D +T +
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + A +LV + G+S+ +D D ++ L +++R + +L + + G
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y L+ LC+ + A ++K+EM+ I P A++ G++ EA
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ ML+ ++P L++ C +V +A L + D SYN +
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
GD++ EL + GF N T K +I L
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 128/325 (39%), Gaps = 35/325 (10%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y+ LI Y ++G + D+ ++R+M P + T ++ + K G+ M+
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
R + PD+ ++N LI C EG ++S L+ +M +G P T ++ Y
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY------- 238
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
C+ R AA LL+ + G + YN L+
Sbjct: 239 ----------------------------CKKGRFKAAIELLDHMKSKGVDADVCTYNMLI 270
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ + +A LL +M R I P+ TY LI F G+ A L++EML G+
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ LI+G+ E + +A + K SY + + ++ +
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
R R G +T MI L K
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCK 415
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F + +G +C+ +++ L + + + V EM + GI P + +
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + C+ GD+ E++ P V + ++ + K G+ ++A L R M +
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++P + ++TTLM+ CK G V EA +L M + GL D+VSYN LI C +G M
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE--LQR---FGVSISRDIY 418
+ L EM G+G + T + +++G S +++++ L R +S+S+D +
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSH 1077
Query: 419 DYLIVAL 425
L +A+
Sbjct: 1078 RNLKMAM 1084
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 36/310 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + SF +R + G P ++C+ L+ G+ + N ++ ++ + G+
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 239 NTHTFNILTHVFCKNGDVD-----------------------------------KVNGFL 263
+ +TFN+L C NG+++ + L
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ ++G P+ Y LI+ C+ G + AF + M + P V + ++ L K
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK EA L M+ L P I S+ TL+ CK G + E+ L M G+ D +
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA-ATSLLERIG 442
+++ G +G + A L E++ G + Y LI L F+ A +L+ +
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1062
Query: 443 QDGYVPSLEI 452
G++ S+ +
Sbjct: 1063 ARGFITSMSL 1072
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 59/151 (39%)
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+Y+ L+ + + D+L + M PS+ T A++ G S + EM
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L+ + PD +LIN C E K+ L+ K +YN V + + + G
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+EL G + T +IH L +
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 236/496 (47%), Gaps = 15/496 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE C+ HIL + A +L EL + S VF
Sbjct: 93 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLM---SGKSSFVF 149
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L++ CN Y++ G+I++S + FR GF PS+ +CN +L ++
Sbjct: 150 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K W +EM + ICP+ TFNIL +V C G +K + ++K+E+ G+ P +V
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNT++ YCKKGR A L M + V D+ TY L++ LC+ ++ + + L M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
R + P+ V+YNTLI + EGK+ + LL EM+ G+ P+ T ++ G+ EG
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL + ++ G++ S Y L+ LC++ A R+ ++G Y +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + +A++L +EM I P + TY ALI FC +GR A ++ + G+
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ I LI C + +A + + D ++N + + G +++ E
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 577 LQKRFLRLGFAPNNLT 592
+ G PN ++
Sbjct: 570 FMRCMTSDGILPNTVS 585
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 215/519 (41%), Gaps = 49/519 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +++ + K A ++L E++ H F LI ++
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT--FNALID-------GHI 384
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G +E+ K F G PS VS LL+GL K D Y M R G+C
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + CKNG +D+ L ++ ++G DPD+VTY+ LI+ +CK GR A + +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 302 YRRNVLPDLVTYTTLM-----------------------------------NGLCKEGKV 326
YR + P+ + Y+TL+ LCK GKV
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA + M G+ P+ VS++ LI Y G+ ++ S+ EM G +P FT +
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
++G K G L A + L ++ +Y+ L+ A+C+ A SL + Q
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAV 505
+P Y L+ LC+ A+L E R N+ P+ Y + G+ +
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++M G PD +I+GY + K LL + + +YN + + +
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
++ D+S L + + G P+ LTC HSL G+
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTC----HSLVLGI 839
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 5/431 (1%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+W Y K G + + + G + + N L++ L + N I + + + +M + I
Sbjct: 276 HW-YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+N L + F G V + L ++ G P+ VT+N LI + +G +A
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 394
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ +M + + P V+Y L++GLCK + A + RM G+ ++Y +I C
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 454
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ LL EM +GI PD T ++ G+ K GR +A +V + R G+S +
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI C+ A + E + +G+ +N L+ SLCK VA+A M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I P+ ++ LI + G +A S+ DEM + G P L+ G C +
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+AE L DT YN + + G+L+K + L ++ P++ Y
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS----YT 690
Query: 597 IHSLWKGMERK 607
SL G+ RK
Sbjct: 691 YTSLISGLCRK 701
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 201/432 (46%), Gaps = 3/432 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + + + + VG P+ + + L+ ++ C+ + ++YE M G
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN+L CK G V + F+ + +G P+ V+++ LI+ Y G AF ++
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P TY +L+ GLCK G +REA + + + D V YNTL+ A CK
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
G + ++ SL EM+ I PD++T ++ G ++G+ + A+ E + R V ++ +
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + + + + A E++ G+ P + N +++ + + L EM
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++N P+L+TY L+ + + L ++ +G+LPD C L+ G C +
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L F + D ++N + + +G+++ +L K LG + + TC M+
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 598 HSLWKGMERKFQ 609
L + +FQ
Sbjct: 907 SVLNR--NHRFQ 916
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 193/455 (42%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +RE+ K + V V N LL + K + + ++ EM + I P+++
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 242 TFNILTHVFCKNGDV------------------DKV------NG------------FLEK 265
T+ L C+ G +KV +G F E+
Sbjct: 690 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
++ G PD+VT N +I Y + G++ L M +N P+L TY L++G K
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V + L+ ++ G+ PD ++ ++L+ C+ ++ +L + G+ D +T +
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + A +LV + G+S+ +D D ++ L +++R + +L + + G
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y L+ LC+ + A ++K+EM+ I P A++ G++ EA
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ ML+ ++P L++ C +V +A L + D SYN +
Sbjct: 990 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
GD++ EL + GF N T K +I L
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 128/326 (39%), Gaps = 35/326 (10%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
Y+ LI Y ++G + D+ ++R+M P + T ++ + K G+ M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ R + PD+ ++N LI C EG ++S L+ +M +G P T ++ Y
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY------ 278
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
C+ R AA LL+ + G + YN L
Sbjct: 279 -----------------------------CKKGRFKAAIELLDHMKSKGVDADVCTYNML 309
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ + +A LL +M R I P+ TY LI F G+ A L++EML G+
Sbjct: 310 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 369
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ LI+G+ E + +A + K SY + + ++ +
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
R R G +T MI L K
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCK 455
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F + +G +C+ +++ L + + + V EM + GI P + +
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + C+ GD+ E++ P V + ++ + K G+ ++A L R M +
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++P + ++TTLM+ CK G V EA +L M + GL D+VSYN LI C +G M
Sbjct: 998 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1057
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE--LQR---FGVSISRDIY 418
+ L EM G+G + T + +++G S +++++ L R +S+S+D +
Sbjct: 1058 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSH 1117
Query: 419 DYLIVAL 425
L +A+
Sbjct: 1118 RNLKMAM 1124
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 36/310 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + SF +R + G P ++C+ L+ G+ + N ++ ++ + G+
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 239 NTHTFNILTHVFCKNGDVD-----------------------------------KVNGFL 263
+ +TFN+L C NG+++ + L
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ ++G P+ Y LI+ C+ G + AF + M + P V + ++ L K
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK EA L M+ L P I S+ TL+ CK G + E+ L M G+ D +
Sbjct: 983 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1042
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA-ATSLLERIG 442
+++ G +G + A L E++ G + Y LI L F+ A +L+ +
Sbjct: 1043 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1102
Query: 443 QDGYVPSLEI 452
G++ S+ +
Sbjct: 1103 ARGFITSMSL 1112
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 236/496 (47%), Gaps = 15/496 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE C+ HIL + A +L EL + S VF
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLM---SGKSSFVF 109
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L++ CN Y++ G+I++S + FR GF PS+ +CN +L ++
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K W +EM + ICP+ TFNIL +V C G +K + ++K+E+ G+ P +V
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNT++ YCKKGR A L M + V D+ TY L++ LC+ ++ + + L M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
R + P+ V+YNTLI + EGK+ + LL EM+ G+ P+ T ++ G+ EG
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL + ++ G++ S Y L+ LC++ A R+ ++G Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + +A++L +EM I P + TY ALI FC +GR A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ I LI C + +A + + D ++N + + G +++ E
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 577 LQKRFLRLGFAPNNLT 592
+ G PN ++
Sbjct: 530 FMRCMTSDGILPNTVS 545
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 215/519 (41%), Gaps = 49/519 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +++ + K A ++L E++ H F LI ++
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT--FNALID-------GHI 344
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G +E+ K F G PS VS LL+GL K D Y M R G+C
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + CKNG +D+ L ++ ++G DPD+VTY+ LI+ +CK GR A + +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 302 YRRNVLPDLVTYTTLM-----------------------------------NGLCKEGKV 326
YR + P+ + Y+TL+ LCK GKV
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA + M G+ P+ VS++ LI Y G+ ++ S+ EM G +P FT +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
++G K G L A + L ++ +Y+ L+ A+C+ A SL + Q
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAV 505
+P Y L+ LC+ A+L E R N+ P+ Y + G+ +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++M G PD +I+GY + K LL + + +YN + + +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
++ D+S L + + G P+ LTC HSL G+
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTC----HSLVLGI 799
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 5/431 (1%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+W Y K G + + + G + + N L++ L + N I + + + +M + I
Sbjct: 236 HW-YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+N L + F G V + L ++ G P+ VT+N LI + +G +A
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ +M + + P V+Y L++GLCK + A + RM G+ ++Y +I C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ LL EM +GI PD T ++ G+ K GR +A +V + R G+S +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI C+ A + E + +G+ +N L+ SLCK VA+A M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I P+ ++ LI + G +A S+ DEM + G P L+ G C +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+AE L DT YN + + G+L+K + L ++ P++ Y
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS----YT 650
Query: 597 IHSLWKGMERK 607
SL G+ RK
Sbjct: 651 YTSLISGLCRK 661
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 201/432 (46%), Gaps = 3/432 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + + + + VG P+ + + L+ ++ C+ + ++YE M G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN+L CK G V + F+ + +G P+ V+++ LI+ Y G AF ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P TY +L+ GLCK G +REA + + + D V YNTL+ A CK
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
G + ++ SL EM+ I PD++T ++ G ++G+ + A+ E + R V ++ +
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + + + + A E++ G+ P + N +++ + + L EM
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++N P+L+TY L+ + + L ++ +G+LPD C L+ G C +
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L F + D ++N + + +G+++ +L K LG + + TC M+
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 866
Query: 598 HSLWKGMERKFQ 609
L + +FQ
Sbjct: 867 SVLNR--NHRFQ 876
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 193/455 (42%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +RE+ K + V V N LL + K + + ++ EM + I P+++
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 242 TFNILTHVFCKNGDV------------------DKV------NG------------FLEK 265
T+ L C+ G +KV +G F E+
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
++ G PD+VT N +I Y + G++ L M +N P+L TY L++G K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V + L+ ++ G+ PD ++ ++L+ C+ ++ +L + G+ D +T +
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + A +LV + G+S+ +D D ++ L +++R + +L + + G
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y L+ LC+ + A ++K+EM+ I P A++ G++ EA
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ ML+ ++P L++ C +V +A L + D SYN +
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
GD++ EL + GF N T K +I L
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 129/326 (39%), Gaps = 35/326 (10%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
Y+ LI Y ++G + D+ ++R+M P + T ++ + K G+ M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ R + PD+ ++N LI C EG ++S L+ +M +G P T ++ Y K+GR
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AA LL+ + G + YN L
Sbjct: 245 K-----------------------------------AAIELLDHMKSKGVDADVCTYNML 269
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ + +A LL +M R I P+ TY LI F G+ A L++EML G+
Sbjct: 270 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ LI+G+ E + +A + K SY + + ++ +
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 389
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
R R G +T MI L K
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCK 415
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F + +G +C+ +++ L + + + V EM + GI P + +
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + C+ GD+ E++ P V + ++ + K G+ ++A L R M +
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++P + ++TTLM+ CK G V EA +L M + GL D+VSYN LI C +G M
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE--LQR---FGVSISRDIY 418
+ L EM G+G + T + +++G S +++++ L R +S+S+D +
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSH 1077
Query: 419 DYLIVAL 425
L +A+
Sbjct: 1078 RNLKMAM 1084
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 36/310 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + SF +R + G P ++C+ L+ G+ + N ++ ++ + G+
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 239 NTHTFNILTHVFCKNGDVD-----------------------------------KVNGFL 263
+ +TFN+L C NG+++ + L
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ ++G P+ Y LI+ C+ G + AF + M + P V + ++ L K
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK EA L M+ L P I S+ TL+ CK G + E+ L M G+ D +
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA-ATSLLERIG 442
+++ G +G + A L E++ G + Y LI L F+ A +L+ +
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1062
Query: 443 QDGYVPSLEI 452
G++ S+ +
Sbjct: 1063 ARGFITSMSL 1072
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 201/415 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ TF + L PS V N LL + K + +M GI P+ +T I+
Sbjct: 28 EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ C VD L KI + G PD T+ TLI C +G++ +A +L+ M
Sbjct: 88 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VTY TL+NGLCK+ +V EA +F M+ +G+SP+IV+YN+LI CK + + +L
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ EM+ + I PD FT +V KEG + A ++V + GV + Y+ L+ C
Sbjct: 208 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 267
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
N A + + + V ++ YN L+ CK SV A+ L +EM + + P+ T
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 327
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C +GR +A+SL EM+ G +PD R L + C + ++KA ALL
Sbjct: 328 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D + Y + + G+L +L G PN T MIH L K
Sbjct: 388 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 442
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 218/453 (48%), Gaps = 19/453 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLIS--CTEDCN 177
I P ++++ L N+ FA L ++++L H D F LI C E
Sbjct: 76 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL----GHQPDATTFTTLIRGLCVE--- 128
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
G I E+ F K + GFQP++V+ L+NGL K + + + ++ EM GI
Sbjct: 129 ------GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGIS 182
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N L H CK + V + ++ + PD+ T NT++ + CK+G + +A +
Sbjct: 183 PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV 242
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+M R V P++VTY LM+G C +V A ++F MVH+ +++SYNTLI YCK
Sbjct: 243 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 302
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ ++ L EM + P+T T ++ G GRL A++L E+ G
Sbjct: 303 IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 362
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L LC++ A +LL+ I + P ++IY +++ +C+ + DA L +
Sbjct: 363 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 422
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ ++P++ TY +I C G EA L EM ++G P+ ++ G+ +
Sbjct: 423 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 482
Query: 538 KA-EALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+ E L A+ F + D + + M ++DG
Sbjct: 483 RTIELLEEMLARGFSV-DVSTTTLLVGMLSDDG 514
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 16/365 (4%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F K L +GFQP +V+ L+NGL K M GI P+ T+N L H
Sbjct: 635 AFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIH 681
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C + V L ++ P++V ++T++ + CK+G + A + +M +R V P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+VTYT LM+G C ++ EA ++F MVH+G P++ SYN LI YC+ +M ++ LL
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 801
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M G+ DT T ++ G GRL A+ L E+ G Y L+ LC++
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 861
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A LL+ I + +YN ++ +C+ + A L + + ++P + TY
Sbjct: 862 HHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTY 921
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR---VLINGYCMEKDVNKAEALLGF 545
+I C G EA L +M E+ + +S R LI M +++ ++
Sbjct: 922 NIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEIDLVYSISVM 981
Query: 546 FAKKF 550
F K F
Sbjct: 982 FEKMF 986
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 170/384 (44%), Gaps = 13/384 (3%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D + M + P+T F L K V +++ G PD+ T
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N LI+S+C RL AF + + + PD+VTY TLMNGLCK M+
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MIT 666
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+G+SPDI +YN+LI A C + + +LL EM+ + I P+ +V KEG +
Sbjct: 667 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 726
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A ++V + + GV Y L+ C + A + + + G VP++ YN L+
Sbjct: 727 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C+ + A+ L ++M + + TY LI C +GR A++L EM+ SG +P
Sbjct: 787 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 846
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D R+L++ C + +A LL D YN + G+L +L
Sbjct: 847 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 906
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
G P+ T MIH L K
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCK 930
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 178/394 (45%), Gaps = 13/394 (3%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ +F + L + PS V LL + K+ + +M GI P+ +T NIL
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 623
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC + L K+ + GF PD+VTY TL++ CK M + +
Sbjct: 624 NSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGIS 670
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ TY +L++ LC + + L + MV+ + P++V ++T++ A CKEG + + +
Sbjct: 671 PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDV 730
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ M+ G+ PD T ++ G+ + A+ + + G + Y+ LI CQ
Sbjct: 731 VDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQ 790
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A LLE++ G + YN L+ LC + A+ L EMV P L T
Sbjct: 791 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 850
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
YR L+ C EA+ L+ + S + D + + I+G C ++ A L +
Sbjct: 851 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 910
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
K D +YN + + + G L + +L ++
Sbjct: 911 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 128/575 (22%), Positives = 234/575 (40%), Gaps = 89/575 (15%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE------- 154
C+ SV + + E+ P + Y ++H L + A+ + E+V
Sbjct: 301 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 360
Query: 155 ---------LVKDCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTF 193
L K+ +D L+ E NW + G + ++ F
Sbjct: 361 VTYRTLSDYLCKN--RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 418
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
G QP++ + N +++GL K + + +++ EM + G PN T+N++T F +N
Sbjct: 419 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 478
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG------------------------ 289
+ + LE++ GF D+ T L+ G
Sbjct: 479 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMR 538
Query: 290 ----------------------RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
L+DA + M + P V +T L+ + K
Sbjct: 539 SLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYS 598
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
L +M G+ PD+ + N LI ++C ++ + S+L +++ G PD T
Sbjct: 599 TVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVT----- 653
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
YG + +N + ++ G+S Y+ LI ALC T+LL + +
Sbjct: 654 --YG------TLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM 705
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ +++ ++++LCK +A A + D M+ R ++P + TY AL+ C EAV +
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D M+ G +P+ + +LINGYC + ++KA LL + + I DT +YN + +
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L + L + G P+ +T + ++ L K
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 11/299 (3%)
Query: 103 QSDSVSALTFFNWVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
Q D V+ T N + + I P Y ++H L ++ +L E+V K P
Sbjct: 648 QPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN-SKIMP 706
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ V VF ++ A K G+I + + G +P +V+ L++G +
Sbjct: 707 NVV-VFSTVVD-------ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 758
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ +V++ M G PN ++NIL + +C+ +DK G LE++ +G D VTYNT
Sbjct: 759 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 818
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI C GRL A L+ M +PDLVTY L++ LCK + EA L +
Sbjct: 819 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 878
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
L DI+ YN I C+ G+++ ++ L + G+ PD T I++ G K G L A
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 937
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 144/324 (44%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++NT S L++A + M + P V + L+ + K L +M
Sbjct: 12 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G+ PD+ + +I + C ++ + S L +++ G PD T +++G EG++
Sbjct: 72 DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL+L ++ G + Y LI LC+D + A ++ + G P++ YN L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LCK L +EMVD I P + T ++ C G EA ++D M+ G+
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ L++G+C+ +V+ A + K + + SYN + N + + + K M
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSL 600
L + R PN +T +IH L
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGL 335
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A S R+ PS +N L+ S+ K + L L +M I P + T +I
Sbjct: 29 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 88
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQI 552
C + R A S + ++L+ G PD+ LI G C+E + +A L + FQ
Sbjct: 89 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ- 147
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ +Y + N +D +++ + + G +PN +T +IH L K E K
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 169/600 (28%), Positives = 252/600 (42%), Gaps = 109/600 (18%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE+K + YCL HIL + A +L L ++ S +F
Sbjct: 93 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIG---SKSIF 149
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L+ CN Y+K G+I + +TF VGF+PS+ +CN +L ++
Sbjct: 150 GALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMV 209
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K + W ++ EM GICPN TFNIL + C G++ K L+++EE GF P +V
Sbjct: 210 KDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIV 269
Query: 277 TYNTLISSYCKKGRLN-----------------------------------DAFYLYRIM 301
TYNTL++ YCKKGR A+ L + M
Sbjct: 270 TYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKM 329
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P+ VTY TL+NG KEGK+ A Q+F+ M LSP+ V+YN LI +C G
Sbjct: 330 RKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDF 389
Query: 362 QESKSLL----------------------YEMMG-NGIYPDTFTCQIIVQGYGKEGRLLS 398
+E+ LL Y +M NG D FTC ++V ++G+L
Sbjct: 390 EEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 449
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A + + R G+ + YD +I P A S + + + G PS Y L++
Sbjct: 450 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 509
Query: 459 SLCK--------------------CDSVA---------------DALLLKDEMVDRNIKP 483
LCK DSV +A+ L D+MV N+ P
Sbjct: 510 GLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLP 569
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGML-PDSQICRVLINGYCMEKDVNKAEAL 542
TY +L+ C G++ AV L + G L P+ + L++G A
Sbjct: 570 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 629
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
KK DT ++NA+ + + G + K + G PN T ++H K
Sbjct: 630 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 689
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 210/484 (43%), Gaps = 24/484 (4%)
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW-AYVKVGLIRES 189
++V L + K A K LC + + P+S+ T DC Y +G +
Sbjct: 436 VLVSSLCRDGKLGEAEKFLCHMSR-IGLVPNSI---------TYDCIINGYGSIGDPLNA 485
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
F F + G PS + LL GL K + + + + I ++ +N L
Sbjct: 486 FSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAE 545
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLP 308
CK+G++ + +K+ + PD TY++L++ C+KG+ A L+ M R + P
Sbjct: 546 TCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFP 605
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ V YT L++GL K G + A F M+ +G PD V++N +I + + G+M ++
Sbjct: 606 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 665
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M G+ P+ T I++ G+ K+ LL L+L + R G+ + + LI+ L +
Sbjct: 666 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 725
Query: 429 NRP------------FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
P +T +L + ++G +P Y L+ +C+ + A LKDEM
Sbjct: 726 GIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEM 785
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
A++ G++ +A+ ++D ML +LP L++ +C + +
Sbjct: 786 EALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKI 845
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A L G D +YN + +GD + EL + PN T +
Sbjct: 846 AEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVL 905
Query: 597 IHSL 600
+ ++
Sbjct: 906 VDAI 909
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 190/464 (40%), Gaps = 48/464 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+VK G I + + F + P+ V+ N L+ G + ++ ++ + M G+
Sbjct: 347 GFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRL 406
Query: 239 NTH-----------------------TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
N H T N+L C++G + + FL + G P+
Sbjct: 407 NEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 466
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+TY+ +I+ Y G +AF + M + P TY +L+ GLCK G + EA + +R
Sbjct: 467 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 526
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ + + D V YNTL+ CK G + E+ +L +M+ N + PD++T ++ G ++G+
Sbjct: 527 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 586
Query: 396 LLSALNLVVELQRFGVSISRD-------IYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
++A+ L FG ++ R +Y L+ L + P AA E + + G P
Sbjct: 587 AVTAVCL------FGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCP 640
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+N +++S + + A M + P+L+TY L+ F +SL
Sbjct: 641 DTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLY 700
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA------------KKFQIYDTE 556
M+ G+ PD LI G + LLG + I
Sbjct: 701 STMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHA 760
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
Y + N GD+ +L+ LGF + + M+ L
Sbjct: 761 QYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGL 804
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 166/397 (41%), Gaps = 18/397 (4%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL-KL 218
P +VD E C K G + E+ F K + P + + LL GL K
Sbjct: 531 PGAVDSVMYNTLLAETC-----KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKG 585
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ MGR + PN + L K G F E++ ++G PD V +
Sbjct: 586 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAF 645
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N +I S ++G++ A + M V P+L TY L++G K+ + L+ M+
Sbjct: 646 NAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR 705
Query: 339 RGLSPDIVSYNTLIFAYCKEGK------------MQESKSLLYEMMGNGIYPDTFTCQII 386
G+ PD +++++LI K G M+ES +L+EM+ NG+ P +
Sbjct: 706 EGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITL 765
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G + G + A L E++ G ++ L + A +L+ + +
Sbjct: 766 INGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRL 825
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P++ + LM C+ +A+AL LK M +K + Y LI C G S A
Sbjct: 826 LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFE 885
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L +EM + P+ VL++ ++ + E LL
Sbjct: 886 LYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLL 922
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 12/327 (3%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ V L++GL K + +EEM + G CP+T FN + + G + K N F
Sbjct: 605 PNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDF 664
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ G P+L TYN L+ + KK L LY M R + PD +T+ +L+ GL K
Sbjct: 665 FSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSK 724
Query: 323 EGK------------VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
G + E+ + H M+ G+ P Y TLI C+ G +Q + L E
Sbjct: 725 SGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 784
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G +V+G G+ A+ ++ + R + + + L+ C+D +
Sbjct: 785 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 844
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A L + G + YN L+ +C A A L +EM R++ P+++TY
Sbjct: 845 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 904
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGML 517
L+ + L+ ++ E G++
Sbjct: 905 LVDAISAANNLIQGEKLLTDLQERGLI 931
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 138/312 (44%), Gaps = 12/312 (3%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + +F F + + G P V+ N +++ + + + + M G+CPN
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 678
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR----------- 290
T+NIL H F K + + + EG PD +T+++LI K G
Sbjct: 679 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 738
Query: 291 -LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ ++ + M V+P Y TL+NG+C+ G ++ A +L M G V+ +
Sbjct: 739 IMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 798
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ GK +++ +L M+ + P T ++ + ++ ++ AL L ++
Sbjct: 799 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 858
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ + Y+ LI+ +C + AA L E + P++ Y L++++ +++
Sbjct: 859 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 918
Query: 470 LLLKDEMVDRNI 481
L ++ +R +
Sbjct: 919 EKLLTDLQERGL 930
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 203/409 (49%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R+ G P + + ++N L LN +D + ++ ++G P+ TF L C
Sbjct: 94 RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 153
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + + +K+ EGF P++VTY TLI+ CK G + A L R M + N P++V +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+TL++ LCK+ +V EA +F M+ +G+SP+IV+YN+LI CK + + +L+ EM+
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+ I PD FT +V KEG + A ++V + GV + Y+ L+ C N
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + + + V ++ YN L+ CK SV A+ L +EM + + P+ TY LI
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +GR +A+SL EM+ G +PD R L + C + ++KA ALL
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D + Y + + G+L +L G PN T MIH L K
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 221/488 (45%), Gaps = 54/488 (11%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD--VFQDLIS--CTEDCN 177
I P ++++ L N+ FA L ++++L H D F LI C E
Sbjct: 101 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL----GHQPDATTFTTLIRGLCVE--- 153
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL----------------NC- 220
G I E+ F K + GFQP++V+ L+NGL K+ NC
Sbjct: 154 ------GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 207
Query: 221 ------------------IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
+ + + ++ EM GI PN T+N L H CK + V
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ ++ + PD+ T NT++ + CK+G + +A + +M R V P++VTY LM+G C
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V A ++F MVH+ +++SYNTLI YCK + ++ L EM + P+T T
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G GRL A++L E+ G Y L LC++ A +LL+ I
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P ++IY +++ +C+ + DA L + + ++P++ TY +I C G
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAV 561
EA L EM ++G P+ ++ G+ + + E L A+ F + D + +
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLL 566
Query: 562 FNMFAEDG 569
M ++DG
Sbjct: 567 VGMLSDDG 574
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P V +N L++S K + L R M + PD+ T ++N LC +V A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ G PD ++ TLI C EGK+ E+ L +M+G G P+ T ++ G K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ L+ +++ + ++ LI +LC+D + A ++ + G P++
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK L +EMVD I P + T ++ C G EA ++D M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ P+ L++G+C+ +V+ A + K + + SYN + N + + +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K M L + R PN +T +IH L
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGL 395
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 70/280 (25%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA F+RM+H+ P V +N L+ + K SL +M GI PD +T I++
Sbjct: 53 EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+LC NR A S L +I + G+
Sbjct: 113 N-----------------------------------SLCHLNRVDFAFSALAKILKLGHQ 137
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + L+ LC + +AL L D+M+ +P++ TY LI C +G + A+ L
Sbjct: 138 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M + P+ + LI+ C ++ V +A FN+F+E
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA----------------------FNIFSE 235
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ G +PN +T +IH L K E K
Sbjct: 236 -------------MITKGISPNIVTYNSLIHGLCKLCEWK 262
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 111/282 (39%), Gaps = 44/282 (15%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y ++ N+ A+K+ +V KDC +V + LI+ Y
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH--KDCVANVISYNTLIN-------GYC 361
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + ++ F + P+ V+ N L++GL + + ++ EM G P+
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV------------------------- 276
T+ L+ CKN +DK L+ IE +DPD+
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481
Query: 277 ----------TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
TYN +I CK+G L +A L+ M + P+ TY + G + +
Sbjct: 482 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 541
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+L M+ RG S D+ + L+ +G Q K +L
Sbjct: 542 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 30/216 (13%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE------- 154
C+ SV + + E+ P + Y ++H L + A+ + E+V
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 155 ---------LVKDCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTF 193
L K+ +D L+ E NW + G + ++ F
Sbjct: 421 VTYRTLSDYLCKN--RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
G QP++ + N +++GL K + + +++ EM + G PN T+N++T F +N
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+ + LE++ GF D+ T L+ G
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 176/679 (25%), Positives = 294/679 (43%), Gaps = 116/679 (17%)
Query: 33 LQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSL--KKGDSHLTLLQNDLKPLLPHL 90
L+I + ++ + NF +TQN + IV+ I + L K +S L L+ N L P + H
Sbjct: 13 LKIKATLKARTQNRKANNFCSKTQNNSNIVNEITTFLNQKNWESLLPLVSNKLSPDVVH- 71
Query: 91 GAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLC 150
V+ + +D L FFNWV+ + ++ ++ IL + FS A ++
Sbjct: 72 ------SVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVN 125
Query: 151 ELV------------ELVKDCPH-------------SVD---VFQDLISCTEDCNWAYVK 182
+++ L+K C + D VF+ LI Y K
Sbjct: 126 QMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLID-------GYKK 178
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
GL E+ F GF ++ CN LL+ LLK N ++ W+ Y M + + +T
Sbjct: 179 KGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYT 238
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ L + + G+ + L ++EE+G P LVTYN +I C+ G +++AF L ++M
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP------------------- 343
++ ++ D+ TY+ L++G K+ + EA + M +GL P
Sbjct: 299 KKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSG 358
Query: 344 ----------------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
++ +YN L+ CK G M+++ +LL EM+ GI PDT T ++
Sbjct: 359 EAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMI 418
Query: 388 QGYGKEGRLLSALNLVVELQR-----------------------------------FGVS 412
+GY KE +L+ E+++ GV
Sbjct: 419 EGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK 478
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ IY LI Q+ R A +L+ + + G P + YN ++ LCK + +A
Sbjct: 479 PNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDY 538
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM++R +KP++ TY ALI +C G A EML G+ P+ +C LI+GYC
Sbjct: 539 LVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCK 598
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E +A ++ + D +Y+A+ + +G L MEL FL G P+ T
Sbjct: 599 EGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT 658
Query: 593 CKYMIHSLWK--GMERKFQ 609
+I K G+ + FQ
Sbjct: 659 YNSIISGFCKQGGIGKAFQ 677
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 208/425 (48%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + + F++ L G P+ V C L++G K + ++ M + P
Sbjct: 560 GYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHP 619
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ L H +NG + L + E+G PD+ TYN++IS +CK+G + AF L+
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLH 679
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P+++TY L+NGLCK G++ A +LF + +GL+ + V+Y T+I YCK
Sbjct: 680 EYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKS 739
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ L EM G+ PD+F ++ G KEG AL+L +E + G + + +
Sbjct: 740 GNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL- 798
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ C+ + A LLE + P Y L++ CK + +A +M
Sbjct: 799 NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK 858
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ P+ TY AL+ + GR E +L DEM+ + PD V+I+ + E D K
Sbjct: 859 RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVK 918
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
L+ KK + + + +S+++++ ++ G + TC ++
Sbjct: 919 TLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVR 978
Query: 599 SLWKG 603
K
Sbjct: 979 CFHKA 983
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 207/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+++ G E+F+ + L G + ++ + N L+ G+ K +++ + EM +GI P
Sbjct: 350 GFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKP 409
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+N + + K + +V L ++++ P T +I+ C+ G + DA ++
Sbjct: 410 DTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVF 469
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
IM V P+ V YTTL+ G +EG+ +EA ++ M +G+ PD++ YN++I CK
Sbjct: 470 EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKS 529
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
KM+E+K L EM+ G+ P+ +T ++ GY K G + A E+ G++ + +
Sbjct: 530 RKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVC 589
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ ATS+ + P + Y+ L+ L + + A+ L E ++
Sbjct: 590 TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE 649
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P + TY ++I FC G G+A L + M + G+ P+ LING C ++ +
Sbjct: 650 KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIER 709
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K ++ +Y + + + + G+LSK L G P++ +I
Sbjct: 710 ARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALID 769
Query: 599 SLWK 602
K
Sbjct: 770 GCRK 773
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 194/397 (48%), Gaps = 5/397 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ +C ++NGL + I+ +V+E M +G+ PN + L + G +
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ ++++G PD++ YN++I CK ++ +A M R + P++ TY L++G CK
Sbjct: 504 LKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCK 563
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+++ A + F M+ G++P+ V LI YCKEG E+ S+ M+G ++PD T
Sbjct: 564 SGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRT 623
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G + G+L A+ L+ E G+ Y+ +I C+ A L E +
Sbjct: 624 YSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMC 683
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
Q G P++ YN L+ LCK + A L D + + + + TY +I +C G
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ--IYDTESYNA 560
+A L DEM G+ PDS + LI+G E + KA L F + Q T S NA
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKA---LSLFLESVQKGFASTSSLNA 800
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + F + G + + +L + + P+++T +I
Sbjct: 801 LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 194/403 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P V+ L++G ++ + ++V EEM G+ N T+N L CK GD++K
Sbjct: 336 GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA 395
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ L ++ G PD TYN +I Y K+ + L M + N++P T ++NG
Sbjct: 396 DALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIING 455
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ G + +A ++F MV G+ P+ V Y TLI + +EG+ QE+ +L M G+ PD
Sbjct: 456 LCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
++ G K ++ A + +VE+ G+ + Y LI C+ A +
Sbjct: 516 VLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFK 575
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P+ + L++ CK S +A + M+ R++ P + TY ALI G
Sbjct: 576 EMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNG 635
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ A+ L+ E LE G++PD +I+G+C + + KA L + +K + +YN
Sbjct: 636 KLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYN 695
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A+ N + G++ + EL G A N +T +I K
Sbjct: 696 ALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCK 738
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 236/513 (46%), Gaps = 47/513 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCNWAYVK 182
PT+ +I++ L + A ++ +V L VK P++V ++ LI +V+
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVK--PNAV-IYTTLIK-------GHVQ 493
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +E+ + + G QP ++ N ++ GL K +++ EM G+ PN +T
Sbjct: 494 EGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYT 553
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ L H +CK+G++ + + +++ G P+ V LI YCK+G +A ++R M
Sbjct: 554 YGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCML 613
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE---- 358
R+V PD+ TY+ L++GL + GK++ A +L + +GL PD+ +YN++I +CK+
Sbjct: 614 GRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIG 673
Query: 359 -------------------------------GKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
G+++ ++ L + G G+ + T I+
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATII 733
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY K G L A L E+ GV +Y LI ++ A SL Q G+
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA 793
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ + N LM+ CK V +A L ++MVD+++KP TY LI C G EA
Sbjct: 794 STSSL-NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQF 852
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+M + ++P++ L++GY M ++ AL K D +++ + + +
Sbjct: 853 FVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLK 912
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+GD K ++L L+ G + C +I L
Sbjct: 913 EGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPL 945
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 182/391 (46%), Gaps = 37/391 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + + + L+ G P + + N +++G K I + +Q++E M + GI PN T+
Sbjct: 635 GKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITY 694
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + CK G++++ + I +G + VTY T+I YCK G L+ AF L+ M
Sbjct: 695 NALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTL 754
Query: 304 RNVLPDLVTYTTL----------------------------------MNGLCKEGKVREA 329
+ V PD Y+ L M+G CK GKV EA
Sbjct: 755 KGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEA 814
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+QL MV + + PD V+Y LI +CK G ++E++ +M + P+ T ++ G
Sbjct: 815 NQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG 874
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y GR L E+ + + +I A ++ L++ + + G S
Sbjct: 875 YNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVS 934
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ + L++ LC+ + V++ L + +++ ++ + SL+T L+ CF G+ A ++
Sbjct: 935 KNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLK 994
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
M+ +PDS LIN +E+D +E
Sbjct: 995 SMVRFKWVPDSTELNDLIN---VEQDSTDSE 1022
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 204/478 (42%), Gaps = 36/478 (7%)
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+V D+ + T N A+ + G +E + + + G PS+V+ N ++ GL + +D
Sbjct: 230 ANVLHDVYTYTHLIN-AHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP--------- 273
+ +++ + M + G+ + T++IL F K + LE++ +G P
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348
Query: 274 --------------------------DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+L TYN L+ CK G + A L M +
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD TY ++ G KE L M L P + +I C+ G ++++ +
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ G+ P+ +++G+ +EGR A+ ++ + + GV Y+ +I+ LC+
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A L + + G P++ Y L+ CK + A EM+ I P+
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVV 588
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
ALI +C G + EA S+ ML + PD + LI+G + A LL F
Sbjct: 589 CTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFL 648
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+K + D +YN++ + F + G + K +L + + G +PN +T +I+ L K E
Sbjct: 649 EKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 171/405 (42%), Gaps = 78/405 (19%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y ++H L N K AM++L E +E K V + +IS +
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE--KGLVPDVFTYNSIIS-------GFC 667
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID------------------- 222
K G I ++F+ G P+I++ N L+NGL K I+
Sbjct: 668 KQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAV 727
Query: 223 ----------------QCWQVYEEMGRIGICPN--------------------------- 239
+ +++++EM G+ P+
Sbjct: 728 TYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES 787
Query: 240 -------THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
T + N L FCK+G V + N LE + ++ PD VTY LI +CK G L
Sbjct: 788 VQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLK 847
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+A + M +RN++P+ +TYT L++G G+ E LF M+ + + PD V+++ +I
Sbjct: 848 EAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMI 907
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
A+ KEG ++ L+ +M+ G C +++ ++ + L ++ +++ G++
Sbjct: 908 DAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLN 967
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+S L+ + + A +L+ + + +VP N+L+
Sbjct: 968 LSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLI 1012
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 203/409 (49%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R+ G P + + ++N L LN +D + ++ ++G P+ TF L C
Sbjct: 94 RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVE 153
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + + +K+ EGF P++VTY TLI+ CK G + A L R M + N P++V +
Sbjct: 154 GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+TL++ LCK+ +V EA +F M+ +G+SP+IV+YN+LI CK + + +L+ EM+
Sbjct: 214 STLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD 273
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+ I PD FT +V KEG + A ++V + GV + Y+ L+ C N
Sbjct: 274 SKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDV 333
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + + + V ++ YN L+ CK SV A+ L +EM + + P+ TY LI
Sbjct: 334 AVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 393
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +GR +A+SL EM+ G +PD R L + C + ++KA ALL
Sbjct: 394 GLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 453
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D + Y + + G+L +L G PN T MIH L K
Sbjct: 454 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 221/488 (45%), Gaps = 54/488 (11%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLIS--CTEDCN 177
I P ++++ L N+ FA L ++++L H D F LI C E
Sbjct: 101 IPPDVYTLAIVINSLCHLNRVDFAFSALAKILKL----GHQPDATTFTTLIRGLCVE--- 153
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL----------------NC- 220
G I E+ F K + GFQP++V+ L+NGL K+ NC
Sbjct: 154 ------GKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 207
Query: 221 ------------------IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
+ + + ++ EM GI PN T+N L H CK + V
Sbjct: 208 PNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 267
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ ++ + PD+ T NT++ + CK+G + +A + +M R V P++VTY LM+G C
Sbjct: 268 MNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCL 327
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V A ++F MVH+ +++SYNTLI YCK + ++ L EM + P+T T
Sbjct: 328 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 387
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G GRL A++L E+ G Y L LC++ A +LL+ I
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 447
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P ++IY +++ +C+ + DA L + + ++P++ TY +I C G
Sbjct: 448 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 507
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAV 561
EA L EM ++G P+ ++ G+ + + E L A+ F + D + +
Sbjct: 508 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV-DVSTTTLL 566
Query: 562 FNMFAEDG 569
M ++DG
Sbjct: 567 VGMLSDDG 574
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P V +N L++S K + L R M + PD+ T ++N LC +V A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ G PD ++ TLI C EGK+ E+ L +M+G G P+ T ++ G K
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ L+ +++ + ++ LI +LC+D + A ++ + G P++
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK L +EMVD I P + T ++ C G EA ++D M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ P+ L++G+C+ +V+ A + K + + SYN + N + + +
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K M L + R PN +T +IH L
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGL 395
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 123/238 (51%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+++S N L+NG K+ +D+ ++EEM R + PNT T+N L H C G +
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ G PDLVTY TL CK L+ A L + + N PD+ YTT+++G+C+
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRA 468
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G++ +A LF + +GL P++ +YN +I CK+G + E+ L EM NG P+ T
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+I +G+ + L + L+ E+ G S+ L+ L D + +L +I
Sbjct: 529 NLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKI 586
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 108/280 (38%), Gaps = 70/280 (25%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA F+RM+H+ P V +N L+ + K SL +M GI PD +T I++
Sbjct: 53 EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+LC NR A S L +I + G+
Sbjct: 113 N-----------------------------------SLCHLNRVDFAFSALAKILKLGHQ 137
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + L+ LC + +AL L D+M+ +P++ TY LI C +G + A+ L
Sbjct: 138 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M + P+ + LI+ C ++ V +A FN+F+E
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA----------------------FNIFSE 235
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ G +PN +T +IH L K E K
Sbjct: 236 -------------MITKGISPNIVTYNSLIHGLCKLCEWK 262
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 111/282 (39%), Gaps = 44/282 (15%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y ++ N+ A+K+ +V KDC +V + LI+ Y
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH--KDCVANVISYNTLIN-------GYC 361
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + ++ F + P+ V+ N L++GL + + ++ EM G P+
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV------------------------- 276
T+ L+ CKN +DK L+ IE +DPD+
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481
Query: 277 ----------TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
TYN +I CK+G L +A L+ M + P+ TY + G + +
Sbjct: 482 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 541
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+L M+ RG S D+ + L+ +G Q K +L
Sbjct: 542 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 583
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 92/236 (38%), Gaps = 33/236 (13%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE------- 154
C+ SV + + E+ P + Y ++H L + A+ + E+V
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 155 ---------LVKDCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTF 193
L K+ +D L+ E NW + G + ++ F
Sbjct: 421 VTYRTLSDYLCKN--RHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLF 478
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
G QP++ + N +++GL K + + +++ EM + G PN T+N++T F +N
Sbjct: 479 SNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRN 538
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG---RLNDAFYLYRIMYRRNV 306
+ + LE++ GF D+ T L+ G + I+Y RN+
Sbjct: 539 NEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIVILYERNL 594
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 154/563 (27%), Positives = 261/563 (46%), Gaps = 25/563 (4%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
E+Q P +++ S+K H +++ L+P L +S LL A F
Sbjct: 40 ESQLPPITSEVLLESIKSSQWHF--IEHVTDKLIPSL----VSTTLLSLVKTPDLAFNFV 93
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT 173
N + DL + CL + +++ + ++L E+V K+ D+F +L+
Sbjct: 94 NHI--DLRCLDFQTQ-CLAIAVVSKLSSPKSVTQLLKEVVSTRKNSVR--DLFDELVLAH 148
Query: 174 EDCNWA-----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+ Y ++ ++ E+ + F + GF P +CN +L+ L +LN I+
Sbjct: 149 DRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIE 208
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
W Y +M R+ I N +TFNI+ +V CK G + K GFL +E G P +VTYNTL+
Sbjct: 209 NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLV 268
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
Y +GR+ A + M + PDL TY +++ +C EG+ A ++ M GL
Sbjct: 269 QGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLV 325
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD VSYN LI G ++ + + EM+ G+ P +T ++ G E ++ +A L
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E++ G+ + Y+ +I CQ A +L + + DG P+ Y L+ LC+
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A L +++V + +KP L L+ C G A SL+ EM + PD
Sbjct: 446 RNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVT 505
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L+ G C E +A L+G ++ D SYN + + +++ GD ++ L
Sbjct: 506 YNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEML 565
Query: 583 RLGFAPNNLTCKYMIHSLWKGME 605
LGF P LT ++ L K +
Sbjct: 566 SLGFNPTLLTYNALLKGLSKNQD 588
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 164/329 (49%), Gaps = 6/329 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GFQP + + N +L+ + + +V EM IG+ P++ ++NIL NGD++
Sbjct: 291 GFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETA 347
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++ ++G P TYNTLI + ++ A L R + + ++ D VTY ++NG
Sbjct: 348 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVING 407
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+ G ++A L M+ G+ P +Y +LI+ C+ K +E+ L +++G G+ PD
Sbjct: 408 YCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPD 467
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
++ G+ G + A +L+ E+ R + Y+ L+ LC + + A L+
Sbjct: 468 LVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMG 527
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P YN L+ K A +++DEM+ P+L TY AL+
Sbjct: 528 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSK-N 586
Query: 500 RSGE-AVSLMDEMLESGMLP-DSQICRVL 526
+ GE A L+ EM G++P DS C V+
Sbjct: 587 QDGELAEELLREMKSEGIVPNDSSFCSVI 615
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 141/282 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +F + + G P+ + N L++GL N I+ + E+ GI ++ T+
Sbjct: 342 GDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 401
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ + +C++GD K +++ +G P TY +LI C++ + +A L+ +
Sbjct: 402 NIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVG 461
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + PDLV TLM+G C G + A L M + PD V+YN L+ C EGK +E
Sbjct: 462 KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ L+ EM GI PD + ++ GY K+G A + E+ G + + Y+ L+
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
L ++ A LL + +G VP+ + ++E++ K D+
Sbjct: 582 GLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 264/581 (45%), Gaps = 72/581 (12%)
Query: 53 PETQNPNKIVDLICSSLKKG-------------DSHLTLLQNDLKPLLPHLGAHEISRVL 99
P + ++ IC+S+ KG D HL ++ +L HL ++ S L
Sbjct: 6 PISNETQLLIQSICASVIKGSWKNLLRPKFGSNDYHLITTTATVRQVLLHLSLYDQSPCL 65
Query: 100 LRCQSDSVSALTFFNWVKNDL-EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+ F W+++ + K + + +++IL + F A L + KD
Sbjct: 66 ---------SWALFKWIESSVPNYKHSLQSSWTMLYILTKHKHFKTAHAFLENIA--FKD 114
Query: 159 CPHSVDVFQDLISCTED-------CNWAYVKVG---LIRESFKTFRKTLDVGFQPSIVSC 208
+ V L+ +D +W + G + E+ + F GF+P + +C
Sbjct: 115 FLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHAC 174
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
LLN L K D W++Y++M ++G+ N H +N+L H CK+GDV+K L ++E
Sbjct: 175 TVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMEL 234
Query: 269 EGFDPDLVTYNTLISSYCKKG-----------------------------------RLND 293
+ PDL TYNTLIS YCKKG R+ +
Sbjct: 235 KCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMRE 294
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A L+R + ++V P+ VTYT+L++G C+ + EA +L M +GL P +++YN+++
Sbjct: 295 AVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILR 352
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C+ G+++++ LL EM I PD TC ++ Y K G + SAL + ++ G+ +
Sbjct: 353 KLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKL 412
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y LI C+ A LL + G+ PS Y+ L++S CK + + L
Sbjct: 413 DQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLP 472
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
DE+V R + +S YRALI FC I + A ++ M + G+ DS + L GY
Sbjct: 473 DELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKV 532
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
VN +L KK + + Y + +A D + L
Sbjct: 533 GKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSL 573
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 37/361 (10%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+H + L V+ + + E + GF P L L++S K + + +Y
Sbjct: 135 NSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIY 194
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + V+ ++ Y L++ CK G V +A ++ M + + PD+ +YNTLI YCK+
Sbjct: 195 KKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKK 254
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G E+ S+ M GI PD FT ++ G+ +EGR+ R V + RDI
Sbjct: 255 GMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRM-----------REAVQLFRDIK 303
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D P+ Y L++ C+ + + +AL LK+ M +
Sbjct: 304 DV--------------------------TPNHVTYTSLIDGYCRVNDLDEALRLKEVMSE 337
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P++ TY +++ C GR +A L++EM E + PD+ C LIN YC D+
Sbjct: 338 KGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRS 397
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A + D +Y A+ + F + ++ K EL + GF+P+ T +++
Sbjct: 398 ALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVD 457
Query: 599 S 599
S
Sbjct: 458 S 458
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 156/377 (41%), Gaps = 54/377 (14%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGF---------------DPDLVTY--NTLISSYCKK 288
+ ++ K+ + FLE I + F DPD+ ++ + L+ Y
Sbjct: 90 MLYILTKHKHFKTAHAFLENIAFKDFLSTQSVLSSLVKIHDDPDVNSHVLSWLVIVYGNS 149
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
++A ++ M P L T L+N L K+ +++ +MV G+ +I Y
Sbjct: 150 KMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVY 209
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N L+ A CK G +++++ +L EM ++PD FT
Sbjct: 210 NVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFT-------------------------- 243
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
Y+ LI C+ + A S+ +R+ G P + YN L+ C+ + +
Sbjct: 244 ---------YNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMRE 294
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+ L ++ D + P+ TY +LI +C + EA+ L + M E G+ P ++
Sbjct: 295 AVQLFRDIKD--VTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILR 352
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
C + A LL +++ D + N + N + + GD+ ++++ + + G
Sbjct: 353 KLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKL 412
Query: 589 NNLTCKYMIHSLWKGME 605
+ T K +IH K E
Sbjct: 413 DQFTYKALIHGFCKAKE 429
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 228/475 (48%), Gaps = 10/475 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y ++ L + A ++L E++ + + LI+ A+
Sbjct: 128 VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLIN-------AFY 180
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ IRE+ K G P +++CN L++G+ K +++ ++ + M G P+
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + H C G V + L+ + PDLVT+NTL+ +CK G L A + M
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R N+LPD++TYT L+NGLC+ G+V+ A L +V +G PD+++Y +L+ CK G++
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ L+ EM G +V GY + G + A ++ E+ + Y+ +
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L +D A SL+ + GYVP + YN L++ LCK + V +A L DEM R
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ T +++ C +GR +A SL+ EM P+ + LI+G C ++ A
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+L + D +Y + + G +++ M + + GF P+ T K +
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 233/496 (46%), Gaps = 14/496 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FF+W K +Y ++ IL + K+ +L L C ++ F+
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDL--LHSGCSPNLVTFKI 67
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI K G + + R + P + N L++GL K DQ +++
Sbjct: 68 LIR-------GNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLF 120
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD--PDLVTYNTLISSYC 286
E M + P T+N + CK+G+++K LE++ +G PD+VTYNTLI+++
Sbjct: 121 ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+ R+ +A M + PD++T L++G+CK+G V EA ++ M G PD++
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN++I A C GK+ E+ +L M PD T ++ G+ K G L AL ++ E+
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R + Y L+ LC+ + A LLE I + GY+P + Y L++ LCK +
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 357
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L EM R + + Y +L+ +C G +A ++ EM+ M+P ++
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+ G + ++KA +L+ + + D +YN + + + + + +L G
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477
Query: 587 APNNLTCKYMIHSLWK 602
PN++T ++ L +
Sbjct: 478 FPNDVTLGSVVFGLCR 493
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 5/341 (1%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E++G+ D+ +YN L+ K G +Y+ + P+LVT+ L+ G CK G+
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A + + ++PD+ +N LI K+G ++ L M + + P+ T +
Sbjct: 79 MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRPFAATSLLERIGQD 444
+ G K G L A L+ E+ R G + DI Y+ LI A + +R A + E++
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P + N L+ +CK V +AL + D M P + TY ++I C G+ EA
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEA 258
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++ M S PD L++G+C + +A +L ++ + D +Y + N
Sbjct: 259 AEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
G + L + +R G+ P+ + ++ L K E
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 356
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 160/606 (26%), Positives = 278/606 (45%), Gaps = 67/606 (11%)
Query: 46 NPLYNFLPETQ-NPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS 104
+PL LPE + +P + + S L K + H LK ++P + +S L
Sbjct: 46 SPLIRNLPEDESDPTSVPHRLFSILSKPNWHKC---PSLKSMVPAISPSHVSS-LFSLDL 101
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D +AL F +W+ + K + +Y ++ +L N K+ + ++K C D
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIR---LLMIKSCDSVAD 158
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC-NFLLNGLLKLNCIDQ 223
L C + ESF+ K I+ C N LLN L + +D+
Sbjct: 159 TLFVLDLCRKMNK---------DESFELKYKL--------IIGCYNTLLNSLARFGLVDE 201
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
QVY EM +CPN +T+N + + +CK G+V++ N ++ I E G DPD TY +LI
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIM 261
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF---------- 333
YC++ L+ AF +++ M + + V YT L++GLC E ++ EA LF
Sbjct: 262 GYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYP 321
Query: 334 -------------------------HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
M +G+ P+I +Y LI + C + K+++++ LL
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M+ G+ P+ T ++ GY K G + AL++V ++ + + Y+ LI C+
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR 441
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
N A +L ++ + +P + YN L++ C+ + A L M DR + P TY
Sbjct: 442 N-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++I C R EA L D + + ++P+ + LI+GYC VN+A +L
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLS 560
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME--- 605
K + ++ ++NA+ + DG L + L+++ +++ P T +IH L K +
Sbjct: 561 KNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDH 620
Query: 606 --RKFQ 609
R+FQ
Sbjct: 621 AYRRFQ 626
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 204/420 (48%), Gaps = 13/420 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQ 167
A+ F +K+D + PT Y +++ L + + S A+ ++ E+ E +K H+ V
Sbjct: 307 AMDLFVKMKDD-DCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D S C + ++ + + L+ G P++++ N L+NG K I+ V
Sbjct: 366 D--SLCSQCK--------LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDV 415
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
E M + PNT T+N L +CK +V K G L K+ E PD+VTYN+LI C+
Sbjct: 416 VELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + A+ L +M R ++PD TYT++++ LCK +V EA LF + + + P++V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVM 534
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y LI YCK GK+ E+ +L +M+ P++ T ++ G +G+L A L ++
Sbjct: 535 YTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ + + LI L +D A +++ G P Y +++ C+ +
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
DA + +M + + P L TY +LI + +GR+ A ++ M ++G P LI
Sbjct: 655 DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLI 714
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 54/396 (13%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ K L+ P +V+ N L++G + D +++ M G+ P+ T+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTS 502
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ CK+ V++ + +E++ P++V Y LI YCK G++N+A + M +N
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKN 562
Query: 306 VLPDLVTYTTLMNGLCKEGKVREA-----------------------HQL---------- 332
LP+ +T+ L++GLC +GK++EA H+L
Sbjct: 563 CLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 333 --FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
F +M+ G PD +Y T I YC+EG++Q+++ ++ +M NG+ PD FT +++GY
Sbjct: 623 RRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGY 682
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL-------CQDNRPFA---------- 433
G GR SA ++ + G S+ + LI L + P
Sbjct: 683 GDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFD 742
Query: 434 -ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRAL 491
LLE++ + G P+ + Y +LM +C+ ++ A + D M + I PS + AL
Sbjct: 743 IVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNAL 802
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+ C C + + EA ++D+M+ G LP + C++LI
Sbjct: 803 LSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILI 838
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 114/530 (21%), Positives = 207/530 (39%), Gaps = 105/530 (19%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTL-LQNDLKPLLPHLGAHEISRVLLRCQSDSVS-A 109
LP+ N ++D C S ++ L L ND + L+P + S + C+S V A
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND-RGLVPDPWTY-TSMIDSLCKSKRVEEA 516
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
F+ ++ ++ P Y ++ K + A ML ++ L K+C + F L
Sbjct: 517 CDLFDSLEQK-DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM--LSKNCLPNSLTFNAL 573
Query: 170 IS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
I CT+ G ++E+ K + + QP++ + L++ LLK D ++
Sbjct: 574 IHGLCTD---------GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+++M G P+ HT+ +C+ G + + K++E G PDL TY++LI Y
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC--KEGKVREAH--------------- 330
GR N AF + + M+ P T+ +L+ L K GKV+
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744
Query: 331 -QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+L +MV G++P+ SY L+ C+ G ++ ++ + M
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ----------------- 787
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Q+ G+S S +++ L+ C+
Sbjct: 788 -----------------QKEGISPSELVFNALLSCCCK---------------------- 808
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
LE +NE A + D+M+ P L + + LIC G S+
Sbjct: 809 LEKHNE-------------AAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQ 855
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+L+ G D +++I+G + V L K + +++Y+
Sbjct: 856 NLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYS 905
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 155/386 (40%), Gaps = 48/386 (12%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPH-LGAHEISRVLLRCQSDSVS 108
+ +P ++D C + K ++HL L + K LP+ L + + L C +
Sbjct: 527 DVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGL--CTDGKLK 584
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVF- 166
T ++++PT S +++H L + F A + +++ K H+ F
Sbjct: 585 EATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Query: 167 ------------QDLISCTEDCNWA------------YVKVGLIRESFKTFRKTLDVGFQ 202
+D+++ ++ + Y +G +F ++ D G +
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCE 704
Query: 203 PSIVSCNFLLNGLLKLN-----------CI-------DQCWQVYEEMGRIGICPNTHTFN 244
PS + L+ LL++ C+ D ++ E+M G+ PN ++
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYE 764
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEE-EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C+ G++ + +++ EG P + +N L+S CK + N+A + M
Sbjct: 765 KLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMIC 824
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
LP L + L+ L K+G+ +F ++ G D +++ +I K+G ++
Sbjct: 825 VGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEA 884
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQG 389
L M NG + T ++++G
Sbjct: 885 FYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 196/372 (52%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R + PN +T+NIL FC G++ K G ++E G P++VTYNTLI +YCK GR
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+++AF L + M + + P+L++Y ++NGLC+EG ++EA ++ M ++G +PD V+YNT
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L+ YCKEG ++ + EM+ NG+ P T ++ K L A+ +++ G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + Y LI + A +L + + G+ PS+ YN + C + + +AL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ EMV++ + P + +Y +I FC G A + EM+E G+ PD+ LI G
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C + + +A L D +Y + N + +GDL+K + L + GF P+
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360
Query: 591 LTCKYMIHSLWK 602
+T +I+ L K
Sbjct: 361 VTYSVLINGLNK 372
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 214/439 (48%), Gaps = 15/439 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+G I E+F + G QP+++S N ++NGL + + + W++ EEMG G P
Sbjct: 54 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 113
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + +CK G+ + ++ G P +VTY LI+S CK LN A +
Sbjct: 114 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 173
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ TYTTL++G ++G + EA+++ + M G SP +V+YN I +C
Sbjct: 174 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 233
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+M+E+ ++ EM+ G+ PD + I+ G+ ++G L A + E+ GVS Y
Sbjct: 234 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 293
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R A L + + G P Y L+ + C + AL L DEM+
Sbjct: 294 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLM-----DEMLESGMLPDSQI----------C 523
+ P TY LI R+ EA L+ +E + S + D+ I
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI G+CM+ +++A+ + ++ YN + + G+L K L K +
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF P+ +T +I +L+K
Sbjct: 474 SGFVPHTVTVITLIKALFK 492
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 197/397 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ + N L+ G + + + + EM R G PN T+N L +CK G +D+ G
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + +G P+L++YN +I+ C++G + +A+ + M + PD VTY TL+NG CK
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG +A + MV G+SP +V+Y LI + CK + + +M G+ P+ T
Sbjct: 128 EGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERT 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ ++G L A ++ E+ G S S Y+ I C R A +++ +
Sbjct: 188 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 247
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + Y+ ++ C+ + A +K EMV++ + P TY +LI C + R
Sbjct: 248 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 307
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L EML+ G+ PD LIN YC+E D+NKA L K + D +Y+ +
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
N + + L + + P+++T +I +
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN 404
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 206/421 (48%), Gaps = 15/421 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + + G PS+V+ L+N + K +++ + +++M G+ P
Sbjct: 124 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L F + G +++ L ++ E GF P +VTYN I +C R+ +A +
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + PD+V+Y+T+++G C++G++ A Q+ MV +G+SPD V+Y++LI C+
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E+ L EM+ G+ PD FT ++ Y EG L AL+L E+ G Y
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK----- 473
LI L + R A LL ++ + VPS Y+ L+E+ + + L+K
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMK 423
Query: 474 ----------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ MV+RN KP + Y +I C G +A +L EM+ SG +P +
Sbjct: 424 GLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTV 483
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI E + ++G + ++ + E + + ++G++ ++ + + + +
Sbjct: 484 ITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLYNK 543
Query: 584 L 584
L
Sbjct: 544 L 544
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 211/407 (51%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ K F + + +G++P +++ + ++NGL K+ Q+ ++M G PN ++
Sbjct: 63 IIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYST 122
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ CK+ + + FL ++ G P++VTY++++ +C GR N+A L++ M RN
Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V+PD VT+ L++GL KEG + EA +F M+ +G+ P++ +YN L+ YC + +M E++
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L M+ G P + I+++G+ K GR+ A L+ E+ ++ Y L+
Sbjct: 243 KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGF 302
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
CQD RP A LLE + G +P L Y+ +++ LCK + +A L M + I+P++
Sbjct: 303 CQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNI 362
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y LI C G+ A L + G+ PD V+I+G N+A L
Sbjct: 363 FIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRD 422
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
A + ++ +YN + F +GD S L + + GF+ ++ T
Sbjct: 423 MAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSST 469
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 230/466 (49%), Gaps = 18/466 (3%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L ++P + +++ L+ K A+K+ E+V++ + D+I+ + N
Sbjct: 41 LGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYE--------PDVITYSTIIN-G 91
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K+G + + +K + G +P++V + +++ L K I + + EM GI PN
Sbjct: 92 LCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPN 151
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T++ + H FC G ++ +++ E PD VT+N L+ K+G + +A ++
Sbjct: 152 VVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFE 211
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + V P++ TY LM+G C + ++ EA +LF+ MV +G +P + SYN LI +CK G
Sbjct: 212 TMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSG 271
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E+K LL EM + PDT T +++G+ ++GR A L+ E++ +G+ Y
Sbjct: 272 RIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYS 331
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC+ A LL+ + + P++ IY L++ +C + A L + +
Sbjct: 332 IVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK 391
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
I+P + TY +I G S EA L +M G LP+S V+I G+ D + A
Sbjct: 392 GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNA 451
Query: 540 EALL------GFFA--KKFQIY-DTESYNAVFNMFAEDGDLSKLME 576
L+ GF A FQ+ D ES + + ++F + M+
Sbjct: 452 GRLIEEMVGRGFSADSSTFQMLSDLESRDEIISLFMHGSSQGRKMK 497
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 193/383 (50%), Gaps = 8/383 (2%)
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ V M ++G+ PN TF+ L + + +++ + G++PD++TY+T+I+
Sbjct: 32 FSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIING 91
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK G A L + M + P++V Y+T+++ LCK+ + EA + MV+RG+SP+
Sbjct: 92 LCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPN 151
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+Y++++ +C G+ E+ SL +M+ + PDT T I+V G KEG +L A +
Sbjct: 152 VVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFE 211
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ GV + + Y+ L+ C ++ A L + + G PS+ YN L++ CK
Sbjct: 212 TMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSG 271
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A L EM + + P TY L+ FC GR +A L++EM G+LPD
Sbjct: 272 RIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYS 331
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED----GDLSKLMELQKR 580
++++G C + +++A LL K Q E ++ + + G L EL
Sbjct: 332 IVLDGLCKQGHLDEAFELL----KAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSN 387
Query: 581 FLRLGFAPNNLTCKYMIHSLWKG 603
G P+ +T MI L KG
Sbjct: 388 LFVKGIQPDVVTYTVMISGLLKG 410
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 43/338 (12%)
Query: 305 NVLPDLVTYT-------------------------------------TLMNGLCKEGKVR 327
N+ PD+ T T TL+NGL + K+
Sbjct: 5 NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+A +LF MV G PD+++Y+T+I CK G + LL +M G P+ I+
Sbjct: 65 DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
K+ + A+ + E+ G+S + Y ++ C R ATSL +++ + +
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +N L++ L K + +A + + M+++ ++P+++TY AL+ +C + EA L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M+ G P + +LI G+C +++A+ LL + K DT +Y+ + F +
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304
Query: 568 DG---DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
DG D KL+E + + G P+ +T ++ L K
Sbjct: 305 DGRPQDAQKLLEEMRSY---GLLPDLMTYSIVLDGLCK 339
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 232/504 (46%), Gaps = 16/504 (3%)
Query: 83 LKPLLPHLGAHEISRVL----LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
++ +LP L H + ++ L S+ A FF ++ + + T Y ++ LA
Sbjct: 73 IRKVLPSLSVHHVVDLINHNPLSLPQRSIFA--FFKFISSQPGFRFTVETYFVLARFLAV 130
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNW-------AYVKVGLIRES 189
+ F+ A + L ELV K + VF L+ T C + Y +G I ++
Sbjct: 131 HEMFTEA-QSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDA 189
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+ FR + F I C LL+ ++KLN W Y E+ G N + FNIL +
Sbjct: 190 IQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNK 249
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
FCK G++ ++I + P +V++NTLI+ YCK G L++ F L M + PD
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+ TY+ L+N LCKE K+ AH LF M RGL P+ V + TLI + + G++ K
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M+ G+ PD +V G+ K G L++A N+V + R G+ + Y LI C+
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A + + + Q+G ++ L+ +CK V DA EM+ IKP TY
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
++ FC G + L+ EM G +P VL+NG C + A+ LL
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 550 FQIYDTESYNAVFNMFAEDGDLSK 573
+ D +YN + + SK
Sbjct: 550 GVVPDDITYNTLLEGHHRHANSSK 573
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+E+ G ++ +++ L+ C++ A + + I + P++ +N L+ CK
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
++ + LK +M +P + TY ALI C + A L DEM + G++P+ I
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 524 RVLINGYCMEKDVN-KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI+G+ +++ E+ +K Q D YN + N F ++GDL + +
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 583 RLGFAPNNLTCKYMIHSLWKG 603
R G P+ +T +I +G
Sbjct: 408 RRGLRPDKITYTTLIDGFCRG 428
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 235/456 (51%), Gaps = 18/456 (3%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+L C++ + AL F+ V ++ Y I+H+L ++ A ++ +L++ +++
Sbjct: 44 ILTCRTAN-QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQN 102
Query: 159 ------CPHSVDVFQDLISCTEDCN------WAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
C +V L S N A+ ++GL+ E+ + K +DV P++
Sbjct: 103 SRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYK-MDV--LPAMQ 159
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L+GL+K D W+VY +M G PN T+ L C+ GD K +++
Sbjct: 160 ACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM 219
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E+ P +V Y LI C + R+++A ++R M +LP+L TY T+M+G CK V
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHV 279
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++A +L+ M+ GL P++V++ LI CK +M ++ L +M G+ P+ F +
Sbjct: 280 KKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G L AL+L E+++ + Y LI LC +R A LL+ + + G+
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P+ YN L++ CK ++ A+ + +M ++ I+P++ T+ LI +C G+ A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
L EM+ G+LPD LI+G+ KD N EA
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHF--KDGNTKEAF 493
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 107/196 (54%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+ + P + + + L+ GL ++ +++ + +EM + G P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L +CK G+++K ++ E+G +P+++T++TLI YCK G++ A LY
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + +LPD+V YT L++G K+G +EA +L M GL P++ + + LI CK+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 359 GKMQESKSLLYEMMGN 374
G++ ++ L G
Sbjct: 522 GRISDAIKLFLAKTGT 537
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L ++ G+V + ++I + +L+++ ++IS+Y R N A L+R M +
Sbjct: 672 LISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQMQMDD 727
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V PD+VT T ++ G + + + HRGL D+ N+LI Y K G++ ++
Sbjct: 728 VQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTAR 787
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 11/153 (7%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++ Q++ +M + P+ T + G +D I G D DL N+L
Sbjct: 714 NKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 773
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRN--VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
I+ Y K G + A RR VLP+ VT+ ++ G V E Q F M
Sbjct: 774 INMYSKCGEIGTA--------RRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKED 825
Query: 340 -GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
L P I + ++ C+ G + E+ + +M
Sbjct: 826 YSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM 858
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 97/225 (43%), Gaps = 16/225 (7%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF+P + +LIS Y G + DA ++ + +N L+++T++++ + +A
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN----LISWTSVISAYVDNQRPNKA 716
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
QLF +M + PDIV+ + A G + + + + G+ D ++
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-- 447
Y K G + +A +RF + + D+ ++ C R ++ Y
Sbjct: 777 YSKCGEIGTA-------RRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLR 829
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
P + + +++ LC+ + +A + ++ ++P+ +R L+
Sbjct: 830 PRISHFGCMVDLLCRAGLLTEAY---EFILKMPVRPNAVVWRTLL 871
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 215/412 (52%), Gaps = 8/412 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G+ PS+++ N +L L + + ++ M R G+ PN +T+NIL C G ++
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 260 NGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
G + + + G P++VTYNTL++++C+ G ++ A L +M V P LVT+ T++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK G++ +A ++F M GL+PD VSYNTL+ YCK G + E+ ++ EM G+ P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ + G L A+ LV +++ G+ ++ + LI C++ A +
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + PS+ YN L+ CK + +A L EM + +KP + TY ++ +C I
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DT 555
G + A L +ML+ G++PD+ LI G C E+ + A L F K Q+ D
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACEL---FEKMLQLGLQPDE 470
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+Y + + ++G++ K + L ++ G P+ +T +I L K K
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTK 522
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 214/454 (47%), Gaps = 50/454 (11%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G P++V+ N L+ + +D ++ M G+ P+ TFN + + CK G ++
Sbjct: 184 AGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMED 243
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+++ EG PD V+YNTL+S YCK G L++A ++ M ++ V+PD+VT+T+L++
Sbjct: 244 ARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIH 303
Query: 319 GLCKEGKVREAHQLFHRMVHRGL-----------------------------------SP 343
+C+ G + A L +M RGL P
Sbjct: 304 AMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQP 363
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+V YN LI YCK G+M E++ L++EM G+ PD T I+ GY K G SA L
Sbjct: 364 SVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELN 423
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
++ + GV Y LI LC++ R A L E++ Q G P Y L++ CK
Sbjct: 424 RKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKE 483
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS--- 520
+V AL L DEM+ + + P + TY LI R+ EA L+ ++ +PD+
Sbjct: 484 GNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKY 543
Query: 521 ----QICR--------VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
CR L+ G+ M+ +N+A+ + + D Y+ + +
Sbjct: 544 EALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRG 603
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++ K + K+ LR GF+PN+ + ++ L++
Sbjct: 604 GNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFE 637
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 206/403 (51%), Gaps = 7/403 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVY-EEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G P++ + N L+ L ++ V ++M G PN T+N L FC+ G+VD
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ + E G P LVT+NT+++ CK GR+ DA ++ M R + PD V+Y TL++
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK G + EA +F M +G+ PD+V++ +LI A C+ G ++ + +L+ +M G+
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ FT ++ G+ + G L AL + E++ + S Y+ LI C+ R A L+
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ G P + Y+ ++ CK A L +M+ + + P TY +LI C
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R G+A L ++ML+ G+ PD LI+G+C E +V KA +L KK + D +Y
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMIH 598
+ + + ++ ++ E Q+ +L + P+N+ + ++H
Sbjct: 509 SVLIDGLSKS---ARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 223/483 (46%), Gaps = 24/483 (4%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ V A V + ++P+ + +V+ L + A KM E+ P
Sbjct: 201 CRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR-EGLTPD 259
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V + L+S Y K G + E+ F + G P +V+ L++ + + +
Sbjct: 260 GVS-YNTLVS-------GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNL 311
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++ + +M G+ N TF L FC+NG +D ++++ E P +V YN L
Sbjct: 312 ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVL 371
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ YCK GR+++A L M + + PD+VTY+T+++G CK G A +L +M+ +G+
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD ++Y++LI C+E ++ ++ L +M+ G+ PD FT ++ G+ KEG + AL+
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E+ + GV Y LI L + R A LL ++ + VP Y LM
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCR 551
Query: 462 KCDSVADALLLK---------------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ + LLK M+DR+ K S Y LI C G +A+S
Sbjct: 552 TAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALS 611
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++L G P+S L+ G E +A+ ++ + D E+ A+ ++
Sbjct: 612 FHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNR 671
Query: 567 EDG 569
++G
Sbjct: 672 KEG 674
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 235/456 (51%), Gaps = 18/456 (3%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+L C++ + AL F+ V ++ Y I+H+L ++ A ++ +L++ +++
Sbjct: 44 ILTCRTAN-QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQN 102
Query: 159 ------CPHSVDVFQDLISCTEDCN------WAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
C +V L S N A+ ++GL+ E+ + K +DV P++
Sbjct: 103 SRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYK-MDV--LPAMQ 159
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L+GL+K D W+VY +M G PN T+ L C+ GD K +++
Sbjct: 160 ACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM 219
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E+ P +V Y LI C + R+++A ++R M +LP+L TY T+M+G CK V
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHV 279
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++A +L+ M+ GL P++V++ LI CK +M ++ L +M G+ P+ F +
Sbjct: 280 KKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G L AL+L E+++ + Y LI LC +R A LL+ + + G+
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P+ YN L++ CK ++ A+ + +M ++ I+P++ T+ LI +C G+ A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
L EM+ G+LPD LI+G+ KD N EA
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHF--KDGNTKEAF 493
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 13/419 (3%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ FR + G P++ + N +++G K+ + + ++Y+EM G+ PN TF I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK ++ FL + G P++ YN LI YCK G L++A L+ + +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+LPD+ TY+ L+ GLC ++ EA L M +G P+ V+YNTLI YCKEG M+++
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ +M GI P+ T ++ GY K G++ +A+ L E+ G+ Y LI
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL------------K 473
+D A L + + + G P++ + L++ LCK ++DA+ L K
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543
Query: 474 DEMVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+DR++ P+ Y ALI C GR +A +M SG+ PD C V+I G+
Sbjct: 544 TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ L K I ++ Y + + E G L + + +G +NL
Sbjct: 604 AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIGCSNL 662
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 13/249 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + ++ + + + G +P+I++ + L++G K ++ +Y EM G+ P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + L K+G+ + ++++E G P++ T + LI CK GR++DA L+
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 299 RI-------------MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ R P+ V YT L+ GLC +G++ +A + F M GL PD+
Sbjct: 532 LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+ +I + + +++ L +++ GI P++ +++ +GY + G L SAL +
Sbjct: 592 FTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSED 651
Query: 406 LQRFGVSIS 414
L G+ S
Sbjct: 652 LSGIGIGCS 660
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 243/512 (47%), Gaps = 55/512 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
+ +F++W + K + + ++ IL +N F A ++L +L + ++ S V +
Sbjct: 63 SWSFYSWTDSLPSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQ--RELLSSPLVLRS 120
Query: 169 LIS-CTED-------CNWA---YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
L+ +ED +W Y K G+I +S F + + G +P + +C LLN L+K
Sbjct: 121 LVGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVK 180
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
D W+++++M ++G+ N H +N+L H K+GD +K L ++EE+G PD+ T
Sbjct: 181 ERLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFT 240
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR-- 335
YNTLIS YCKK +A + M R V PD+VTY +L++G +EG++REA +LF +
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIK 300
Query: 336 --------------------------------MVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
M RG P +V+YN+++ C++G+++E
Sbjct: 301 GVVMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIRE 360
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL EM I PD TC ++ Y K ++SA+ + ++ G+ + Y LI
Sbjct: 361 ANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 424 ALCQ----DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
C+ DN S++E+ G P Y+ L++ + + L +E R
Sbjct: 421 GFCKVLELDNAKEELFSMIEK----GLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKR 476
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P ++ YR LI C + + A L + M + G++ DS I + Y V A
Sbjct: 477 GLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDA 536
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
AL + + + + Y ++ +A D D+
Sbjct: 537 SALFDVMYNRRLMVNLKLYKSLSASYAGDNDV 568
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 201/436 (46%), Gaps = 30/436 (6%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+W + + FKT + LD Q ++S +L L+ G +
Sbjct: 83 SWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLRSLV---------------GGVSE 127
Query: 237 CPN--THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
P +H F+ L + K+G ++ E+I G P L L++S K+ RL D
Sbjct: 128 DPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKE-RLTDT 186
Query: 295 FY-LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ +++ M + V+ ++ Y L++ K G +A +L M +G+ PDI +YNTLI
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
YCK+ E+ S+ M +G+ PD T ++ G+ +EGR+ A L +++ GV +
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIK--GVVM 304
Query: 414 SRDI-YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ + Y LI C+ N A L E + G+ P + YN ++ LC+ + +A L
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRL 364
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM + I+P T LI +C I AV + +M+ESG+ D + LI+G+C
Sbjct: 365 LTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+++ A+ L +K +Y+ + + F ++ +L + F + G P+
Sbjct: 425 VLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDV-- 482
Query: 593 CKYMIHSLWKGMERKF 608
+L++G+ R+
Sbjct: 483 ------ALYRGLIRRI 492
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 232/493 (47%), Gaps = 20/493 (4%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY---- 180
T +YC++ HIL + A +L E+V L K DVF +L S C +
Sbjct: 9 TIESYCIVAHILFCARMYYDANSILREIV-LSKAELEECDVFDELWSTRNVCVPGFGVFD 67
Query: 181 ------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+ +G++ E+ + F K P SCN LL+ KL D + +++M
Sbjct: 68 ALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGA 127
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G P T+NI+ K GD++ G E+++ G PD VTYN++I Y K GRL+D
Sbjct: 128 GSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
Y + M + PD++TY +L+N CK GK+ + + + M GL P++VSY+TL+ A
Sbjct: 188 VYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDA 247
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+CKE MQ++ +M G P+ FT +V K G L A L E+ GV +
Sbjct: 248 FCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWN 307
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI LC R A L ++ G +P+L YN L+ K ++ AL L +
Sbjct: 308 VVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLN 367
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
E+ R I+P L Y I CG+ + A +M+EM E+G+ ++ I L++ Y K
Sbjct: 368 ELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYF--K 425
Query: 535 DVNKAEALLGFFAKKFQIYDTE----SYNAVFNMFAEDGDLSKLMELQKRFLR-LGFAPN 589
N E L ++ Q D E ++ + + ++ +SK ++ R G PN
Sbjct: 426 SGNPTEGL--HLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483
Query: 590 NLTCKYMIHSLWK 602
MI L K
Sbjct: 484 AAVYTAMIDGLCK 496
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 209/441 (47%), Gaps = 44/441 (9%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C V + LI+C + K G + + + +R+ G +P++VS + L++ K
Sbjct: 199 CEPDVITYNSLINC-------FCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKE 251
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ + Q + Y +M R+G PN T+ L CK G++ ++ E G + ++VTY
Sbjct: 252 DMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTY 311
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
LI C R+ +A L+ M V+P+L +Y L++G K + A +L + +
Sbjct: 312 TALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 371
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD++ Y T I+ C K++ +K ++ EM NGI +T ++ Y K G
Sbjct: 372 RGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTE 431
Query: 399 ALNLVVELQR------------------------------------FGVSISRDIYDYLI 422
L+L+ E+Q FG+ + +Y +I
Sbjct: 432 GLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMI 491
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC++N+ AAT+L E++ Q+G VP Y LM+ K ++ +AL L+D+M + +K
Sbjct: 492 DGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMK 551
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
L Y +L+ F + +A S ++EM+ +LPD +C ++ + +++A L
Sbjct: 552 LDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGL 611
Query: 543 LGFFAKKFQIYDTESYNAVFN 563
+ K Q+ +++ NA+ N
Sbjct: 612 QSYLMKH-QLLTSDNNNALPN 631
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 213/421 (50%), Gaps = 1/421 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + + G V+ N L++G + + Q+ +M R + P+ +
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL CK G + + G L + + G PD+VTYN L+ YC + +++A L+ M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R + PD++ Y L++G CK V EA LF + ++ L P I SYN+LI C G++
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
K LL EM G+ PD T I++ KEGR+L AL ++V + + GV + Y+ +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C N A + R+ + G P + YN L+ CK + V +A++L EM +N+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +++Y +LI C +GR L+DEM +SG PD +L++ +C + +KA +
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + D + +A+ + + L + K L G +PN T +I++L
Sbjct: 567 LFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 602 K 602
K
Sbjct: 626 K 626
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 216/443 (48%), Gaps = 7/443 (1%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P VF L+ A V++G + F + G PSI + L+N +
Sbjct: 52 PPPTSVFDKLLG-------AIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQS 104
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ + + + G PN TFN + + FC NG + K F + + +G+ D TY
Sbjct: 105 HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYG 164
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TLI+ K G++ A +L + M + +V P+LV Y+ L++GLCK+G V +A L ++ R
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ D V+YN+LI C G+ QE LL +M+ + PD +T I++ KEGR+L A
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
++ + + G Y+ L+ C A L R+ + G P + YN L++
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK V +A++L E+ ++N+ P++++Y +LI C GR L+DEM S PD
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+LI+ C E + +A +L KK + +YNA+ + + +++ ++
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464
Query: 580 RFLRLGFAPNNLTCKYMIHSLWK 602
R ++ G P+ L +I+ K
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCK 487
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 233/529 (44%), Gaps = 45/529 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+T FN + PTS L+ I+ + + A+ + +L K S+ F
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGH-YPTAISLFTQLQS--KGISPSIATFTI 95
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+C Y +F L G+QP++V+ N ++NG I +
Sbjct: 96 LINC-------YFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFC 148
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ + G + T+ L + KNG + L+++E+ P+LV Y+ LI CK
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++DA L + R +L D VTY +L++G C G+ +E QL +MV + PD ++
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Query: 349 NTLIFAYCKEGKM-----------------------------------QESKSLLYEMMG 373
N LI A CKEG++ E++ L M+
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G+ PD +++ GY K + A+ L EL + + Y+ LI LC R
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
LL+ + P + YN L+++LCK + +AL + M+ + +KP++ TY A++
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
+C A + + M++SG+ PD VLINGYC + V++A L K I
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D SYN++ + G + + EL G +P+ +T ++ + K
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 200/418 (47%), Gaps = 23/418 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K ++ E+ F++ + P+I S N L++GL I ++ +EM P
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NIL CK G + + G L + ++G P++VTYN ++ YC + +N A ++
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD++ Y L+NG CK V EA LF M H+ L PDI SYN+LI C
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ + LL EM +G PD T I++ + K A++L ++ I D Y
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE---GIWPDFY 580
Query: 419 -DYLIV-ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++ IV LC+ + A L+ + G P+++ Y L+ +LCK S +A+LL +M
Sbjct: 581 TNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKM 640
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
D + P T+ +I + +A L +EM I R L+N +EK +
Sbjct: 641 EDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEM----------IARGLVN---IEKSL 687
Query: 537 NKAEALLGFFAKKFQ----IYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPN 589
N++ + + FQ Y ++ +A + F D +S+ ++ RF P+
Sbjct: 688 NQSHNVFFPASSGFQSVTEFYRVQASHAGSHRFNCTTDPISRSNQIHHRFTVQPVGPS 745
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 187/409 (45%), Gaps = 1/409 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G I E+ G +P IV+ N L+ G + + +++ M + G+ P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N+L +CK VD+ +++ + P + +YN+LI C GR++ L
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ PD+VTY L++ LCKEG++ EA + M+ +G+ P+IV+YN ++ YC
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +K + M+ +G+ PD +++ GY K + A+ L E++ + Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC R LL+ + G P + YN L+++ CK A+ L ++V+
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P T A++ C + A + +L G P+ Q +LIN C + +
Sbjct: 574 -GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
A LL + D ++ + + + + K +L++ + G
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D + M R+ P T F+ L + G +++ +G P + T+
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ Y + AF L + + P+LVT+ T++NG C G + +A ++ +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
D +Y TLI K G+++ + LL EM + + P+ ++ G K+G + AL
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L ++ G+ + Y+ LI C R T LL ++ ++ P +N L+++L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + +A + M R KP + TY AL+ +C EA L + M++ G+ PD
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
VLI+GYC K V++A L K + SYN++ + G +S + +L
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
P+ +T +I +L K
Sbjct: 396 MHGSAQPPDVVTYNILIDALCK 417
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%)
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C+ ++DA + M R P + L+ + + G A LF ++ +G+SP I
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++ LI Y + + SLL ++ +G P+ T I+ G+ G + AL+
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
L G + Y LI L ++ + AA LL+ + + P+L +Y+ L++ LCK
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V+DAL L ++ +R I TY +LI C +GR E L+ +M+ + PD +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI+ C E + +A+ +L +K+ + D +YNA+ + ++ + EL R ++ G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 586 FAPNNLTCKYMIHSLWK 602
P+ L +I K
Sbjct: 331 LEPDVLNYNVLIDGYCK 347
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%)
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C+ +V DA+ + MV P S + L+ +G A+SL ++ G+ P
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+LIN Y + A +LL K + ++N + N F +G + K ++ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGMERK 607
L G+ + T +I+ L K + K
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIK 177
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 237/497 (47%), Gaps = 17/497 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD-V 165
AL F NWV + +LE+ + C HIL ++FA L L++L P ++ V
Sbjct: 35 ALKFLNWVIKQPNLELNHVTHIICTTTHILVRARMYNFAKTTLKHLLQL----PIGLNSV 90
Query: 166 FQDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
F L+ CN ++ ++ ++ +TF G PS+ +CN +L L
Sbjct: 91 FGALMETYPICNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSL 150
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K +D W ++ M GICP+ TFNIL + C+ G L K+EE G P
Sbjct: 151 VKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTA 210
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTYNTL++ YCKKGR A L M + + D+ TY ++ LC++ + + + L R
Sbjct: 211 VTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKR 270
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M + P+ ++YNTLI + +EGK++ + + EM + P++ T ++ G+ G
Sbjct: 271 MRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGN 330
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL L+ + G+ + Y L+ L ++ +S+LER+ G S Y
Sbjct: 331 IGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTA 390
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ LCK + +A+ L D+M+ ++ P + T+ LI F +G+ A +M +M ++G
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++P+ + LI YC + +A + D + N + F G L +
Sbjct: 451 LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510
Query: 576 ELQKRFLRLGFAPNNLT 592
R+G PN++T
Sbjct: 511 YFMNHMSRMGLDPNSVT 527
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 215/496 (43%), Gaps = 75/496 (15%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+V+ G I + K F + P+ ++ N L+ G I + ++ + M G+ P
Sbjct: 289 GFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRP 348
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + KN + V+ LE++ G ++Y +I CK G L +A L
Sbjct: 349 NEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLL 408
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + +V PD+VT++ L+NG + GK+ A ++ +M GL P+ + Y+TLI+ YCK
Sbjct: 409 DDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKM 468
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++E+ + M +G D FTC ++V + + G+L A + + R G+ + +
Sbjct: 469 GYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTF 528
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL------------------ 460
D +I A S+ +++ G+ PSL Y L++ L
Sbjct: 529 DCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRC 588
Query: 461 -----------------CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR--- 500
C+ +++DA+ L +EMV + P TY LI C G+
Sbjct: 589 IPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVA 648
Query: 501 ----SGEAV-------------SLMD----------------EMLESGMLPDSQICRVLI 527
SG+A+ SL+D EML + PD+ V+I
Sbjct: 649 ALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVII 708
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+ Y + +K +L K ++ +YN + + +A+ +++ L K +R GF
Sbjct: 709 DQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFL 768
Query: 588 PNNLTCKYMIHSLWKG 603
P+ K+ HSL G
Sbjct: 769 PD----KFSWHSLILG 780
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 218/499 (43%), Gaps = 23/499 (4%)
Query: 112 FFNWVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
F+++ K L I P + + ++++ L KF A +L ++ E V+
Sbjct: 159 FWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEE--------SGVYPTA 210
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
++ NW Y K G + + + G + + N ++ L + + + + + +
Sbjct: 211 VTYNTLLNW-YCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLK 269
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
M R + PN T+N L F + G ++ +++ P+ +TYNTLI+ +C G
Sbjct: 270 RMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTG 329
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +A L +M + P+ VTY L+NGL K + + RM G+ +SY
Sbjct: 330 NIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYT 389
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I CK G ++E+ LL +M+ + PD T +++ G+ + G++ +A ++ ++ +
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ + +Y LI C+ A + + G+V N L+ + C+ + +A
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA 509
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV---SLMDEMLESGMLPDSQICRVL 526
+ M + P+ T+ C G G SG+A+ S+ D+M G P L
Sbjct: 510 EYFMNHMSRMGLDPNSVTFD---CIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGL 566
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQI---YDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+ G C+ +N+A L FF + I D +N G+LS + L +
Sbjct: 567 LKGLCIGGHINEA---LKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVT 623
Query: 584 LGFAPNNLTCKYMIHSLWK 602
F P+N T +I L K
Sbjct: 624 NDFLPDNFTYTNLIAGLCK 642
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 185/445 (41%), Gaps = 37/445 (8%)
Query: 171 SCTEDCNW-AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
S T DC Y G ++F F K G PS+ + LL GL I++ + +
Sbjct: 525 SVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFH 584
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+ I + FN C++G++ + ++ F PD TY LI+ CKKG
Sbjct: 585 RLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKG 644
Query: 290 RLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV-- 346
++ A L + +L P+ YT+L++GL K G R A +F M+++ + PD V
Sbjct: 645 KIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAF 704
Query: 347 ---------------------------------SYNTLIFAYCKEGKMQESKSLLYEMMG 373
+YN L+ Y K M L +M+
Sbjct: 705 NVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIR 764
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+G PD F+ ++ GY + A+ ++ + G I R ++ LI C+ N
Sbjct: 765 HGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKK 824
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A L++++ Q +P+++ YN L L + A + +++ P+ Y LI
Sbjct: 825 AFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLIN 884
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +G A+ L DEM G+ + ++ G K + A +L + I
Sbjct: 885 GMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIP 944
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQ 578
++ + +++ ++ +++K +EL+
Sbjct: 945 TVATFTTLMHVYCKEANVAKALELR 969
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 160/368 (43%)
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ PN + L K+G E++ + +PD V +N +I Y +KG+ +
Sbjct: 662 LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M +N+ +L TY L++G K + L+ M+ G PD S+++LI Y
Sbjct: 722 DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C+ + +L + G D FT +++ + + + A LV ++ +F V +
Sbjct: 782 CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
D Y+ L L + + A +L+ + + G VP+ + Y L+ +C+ ++ A+ L+DE
Sbjct: 842 DTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDE 901
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M I A++ + A+ ++D MLE ++P L++ YC E +
Sbjct: 902 MKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEAN 961
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V KA L D +YN + + +GD+ +L + + PN
Sbjct: 962 VAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIV 1021
Query: 596 MIHSLWKG 603
+I S G
Sbjct: 1022 LIDSFCAG 1029
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 153/324 (47%), Gaps = 7/324 (2%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
++ + N LL+G K + + +C+ +Y++M R G P+ +++ L +C++ D L
Sbjct: 735 NLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKIL 794
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
I EG D T+N LI+ +C++ + AF L + M + V+P++ TY L NGL +
Sbjct: 795 RWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRT 854
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+AH++ ++ G P Y TLI C+ G ++ + L EM GI
Sbjct: 855 SDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAM 914
Query: 384 QIIVQGYGKEGRLLSA---LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
IV+G ++ +A L+L++E+Q + + + L+ C++ A L
Sbjct: 915 SAIVRGLANSKKIENAIWVLDLMLEMQ---IIPTVATFTTLMHVYCKEANVAKALELRSI 971
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + YN L+ LC + A L +EM R++ P+ S Y LI FC
Sbjct: 972 MEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNY 1031
Query: 501 SGEAVSLMDEMLESGMLP-DSQIC 523
E+ L+ ++ + ++ + Q C
Sbjct: 1032 QIESEKLLRDIQDRELMRLNQQFC 1055
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 162/363 (44%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K G R + F + L+ +P V+ N +++ + + + M +C N
Sbjct: 677 LKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNL 736
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+NIL H + K + + + + GF PD ++++LI YC+ + A + R
Sbjct: 737 ATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRW 796
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + D T+ L+ C+ ++++A +L +M + P++ +YN L +
Sbjct: 797 ITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSD 856
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ +L ++ +G P ++ G + G + A+ L E++ G+S
Sbjct: 857 FHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSA 916
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L + A +L+ + + +P++ + LM CK +VA AL L+ M +
Sbjct: 917 IVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCH 976
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+K + Y LI C G A L +EM + + P++ I VLI+ +C ++E
Sbjct: 977 VKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESE 1036
Query: 541 ALL 543
LL
Sbjct: 1037 KLL 1039
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 35/280 (12%)
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V +A Q F+ M RGL+P + + N ++ + KE K+ S M+ GI PD T I
Sbjct: 121 VGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNI 180
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ + G+ +A L+ +++ GV + Y+ L+ C+ R AA+ L++ + G
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ YN +++LC+ A LL M + P+ TY LI F G+ A
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ DEM +LP+S LI G+C
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHC---------------------------------- 326
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
G++ + + L + G PN +T +++ L+K E
Sbjct: 327 -TTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAE 365
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 218/459 (47%), Gaps = 14/459 (3%)
Query: 74 SHLTLLQND---LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYC 130
+H L+ +D L + L + + ++L+ + D V + FFNWVK T Y
Sbjct: 136 AHSHLINSDWAKLNSMSTGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYS 195
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA----------Y 180
+I+HIL N+KF A +L ++ H +F+ ++ C+ + Y
Sbjct: 196 IILHILTKNHKFKSAESVLKGILG-SGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTY 254
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
++ +R + F + D GF P + SCN ++ + L D Y EM R I PN
Sbjct: 255 AQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNV 314
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T N++ FCK G ++K +++E GF P + +YNTLI+ YC KG LN L +
Sbjct: 315 YTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKIL 374
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + V PD VT+ TL+NG C+ GK+ EA+++F M + P+ ++YNTLI Y + G
Sbjct: 375 MEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGN 434
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ L EM+ NGI D T ++ G EGR A LV EL R + + +
Sbjct: 435 SEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSA 494
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C A L + + + G P+ + L+ + CK + A+ + EM +R+
Sbjct: 495 LITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERS 554
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
I P T L G+ A+ L EM ++P+
Sbjct: 555 IAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPE 593
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 153/335 (45%), Gaps = 2/335 (0%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICPNTH-TFNILTHVFCKNGDVDKVNGFLE 264
S +L G+L ID +++E + IC ++ F+ L + + +
Sbjct: 209 SAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFC 268
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++++ GF P + + N IS+ R + A YR M R + P++ T +M CK G
Sbjct: 269 QMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWG 328
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ +A ++F RM G SP I SYNTLI YC +G + L M NG+ PD T
Sbjct: 329 KLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFN 388
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ + G+L A + E++ V + Y+ LI Q L + + ++
Sbjct: 389 TLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRN 448
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + YN L+ LC A L E+ N+ P+ ST+ ALI C S A
Sbjct: 449 GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERA 508
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L M+ SG P+ ++LI+ +C +D + A
Sbjct: 509 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGA 543
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 162/383 (42%), Gaps = 18/383 (4%)
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG--------FDPDLVTY---------- 278
C T++I+ H+ KN L+ I G F+ L +Y
Sbjct: 188 CQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVF 247
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
++L +Y + +L +A ++ M LP + + ++ + A + M
Sbjct: 248 DSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQR 307
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+SP++ + N ++ A+CK GK++++ + M G P + ++ GY +G L S
Sbjct: 308 YRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNS 367
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ L + +++ GV ++ LI C+ + A + + + VP+ YN L+
Sbjct: 368 GMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLIN 427
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ + L DEM+ IK + TY ALI C GR+ +A L+ E+ ++P
Sbjct: 428 GYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVP 487
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+S LI G C+ K+ +A L + + ++ + + F ++ D +E+
Sbjct: 488 NSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVV 547
Query: 579 KRFLRLGFAPNNLTCKYMIHSLW 601
+ AP++ T + LW
Sbjct: 548 REMSERSIAPDSDTLSELCRGLW 570
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + E+ K F + P+ ++ N L+NG ++ + ++++EM R GI
Sbjct: 393 GFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKA 452
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L C G K +++++ E P+ T++ LI+ C + AF LY
Sbjct: 453 DILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLY 512
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R P+ T+ L++ CK A ++ M R ++PD + + L
Sbjct: 513 KSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLS 572
Query: 359 GKMQESKSLLYEMMGNGIYPDTF 381
GK + + L EM + P+ F
Sbjct: 573 GKEELALKLCKEMEMKHLMPEGF 595
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 235/505 (46%), Gaps = 13/505 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
S FF ++ + E + T Y ++ LA + F A + L ELV K + VF
Sbjct: 100 SIFAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEA-QSLIELVVSRKGKNSASSVFI 158
Query: 168 DLISC--TEDCNW-------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
L+ T C++ Y+ +G I + + FR + F I C LL+ ++KL
Sbjct: 159 SLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKL 218
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N W Y E+ G N + FNIL + FCK G++ ++I + P +V++
Sbjct: 219 NPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSF 278
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NTLI+ YCK G L+ F L M + PD+ TY+ L+N LCKE K+ AH+LF+ M
Sbjct: 279 NTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCE 338
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RGL P+ V + TLI + + G++ K +M+ G+ PD +V G+ K G L++
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A N+V + R G+ + Y LI C+ A + + + Q+G ++ L+
Sbjct: 399 ARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALIC 458
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+CK V DA EM+ +KP TY ++ FC G + L+ EM G +P
Sbjct: 459 GMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIP 518
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ VL+NG C + A+ LL + D +YN + + SK
Sbjct: 519 NVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHY--- 575
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKG 603
K+ +G + + K +++ L++
Sbjct: 576 KQKPEIGIVADLASYKSLVNELYRA 600
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 204/403 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G ++ S N L+N L +L+ +D V +M ++GI P+ TFN L + C G + +
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEA 185
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G ++ G +P++++YNT+I+ CK G A ++R M + P++VTY T+++
Sbjct: 186 VGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDS 245
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ V EA + MV RG+ PD+V+YNT++ +C G++ E+ L EM+G + PD
Sbjct: 246 LCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPD 305
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T T I+V G KEG + A + + G + Y+ L+ C N+ A +L
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P+L YN L+ CK + +A L EM ++N+ P TY L+ C +G
Sbjct: 366 IMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVG 425
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA++L EM SG+LPD +L++G+C +++A LL ++ + Y
Sbjct: 426 RPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYT 485
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G L EL + G P+ T MI L K
Sbjct: 486 ILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLK 528
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 213/414 (51%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I+E+ F + + G +P+++S N ++NGL K +V+ +M + PN T+
Sbjct: 180 GKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTY 239
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK+ V++ FL ++ + G PD+VTYNT++ +C G+LN+A L++ M
Sbjct: 240 NTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG 299
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
RNV+PD VT+ L++GLCKEG V EA + M +G P+ +YN L+ YC +M E
Sbjct: 300 RNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDE 359
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M+G G P+ + I++ GY K R+ A L+ E+ ++ Y L+
Sbjct: 360 AIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQ 419
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LCQ RP A +L + + G +P L Y+ L++ CK + +AL L EM +R IKP
Sbjct: 420 GLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKP 479
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y LI G+ A L ++ G+ PD V+I G E ++A
Sbjct: 480 NIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFF 539
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ D+ SYN + F ++ D S ++L + F+ ++ T + ++
Sbjct: 540 RKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 232/490 (47%), Gaps = 14/490 (2%)
Query: 109 ALT-FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
ALT F+ V+ + +P+ + + +A ++S A+ LC ++L H+V
Sbjct: 80 ALTSFYRMVR--MNPRPSVVEFGKFLGSIAKKKQYSSAVS-LCNQMDLF-GVTHNVYSLN 135
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+C C ++V + K +G QP ++ N L+NGL I + +
Sbjct: 136 VLINCL--CRLSHVDFAV-----SVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGL 188
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ EM G PN ++N + + CKNG+ K+E+ P++VTYNT+I S CK
Sbjct: 189 FNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK 248
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+N+A M R + PD+VTY T+++G C G++ EA +LF MV R + PD V+
Sbjct: 249 DRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVT 308
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N L+ CKEG + E++ + M G P+ +T ++ GY ++ A+ ++ +
Sbjct: 309 FNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMI 368
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + + Y+ LI C+ R A LL + + P Y+ LM+ LC+
Sbjct: 369 GKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPR 428
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+AL L EM + P L Y L+ FC G EA+ L+ EM E + P+ + +LI
Sbjct: 429 EALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILI 488
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G + + A+ L + D +YN + ++G + E ++ GF
Sbjct: 489 RGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFL 548
Query: 588 PNNLTCKYMI 597
P+ +C Y +
Sbjct: 549 PD--SCSYNV 556
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+ E+ + + +D G P +V+ N +L+G L +++ ++++EM + P+T TFN
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFN 310
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
IL CK G V + E + E+G +P+ TYN L+ YC ++++A + IM +
Sbjct: 311 ILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK 370
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
P+L +Y L+NG CK ++ EA +L M + L+PD V+Y+TL+ C+ G+ +E+
Sbjct: 371 GCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREA 430
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+L EM +G+ PD I++ G+ K G L AL L+ E+ + + +Y LI
Sbjct: 431 LNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRG 490
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ + A L ++ DG P + YN +++ L K +A +M D P
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPD 550
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
+Y +I F S A+ L+DEM+ DS ++L++
Sbjct: 551 SCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 173/369 (46%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID + M R+ P+ F K +++ G ++ + N
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ C+ ++ A + M++ + PD +T+ TL+NGLC EGK++EA LF+ MV G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
P+++SYNT+I CK G + + +M N P+ T I+ K+ + A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+ E+ G+ Y+ ++ C + AT L + + +P +N L++ L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK V++A + + M ++ +P+ TY AL+ +C + EA+ ++ M+ G P+
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+LINGYC K +N+A+ LL ++K DT +Y+ + + G + + L K
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436
Query: 581 FLRLGFAPN 589
G P+
Sbjct: 437 MCSSGLLPD 445
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 65/173 (37%), Gaps = 35/173 (20%)
Query: 465 SVADALLLKDEMVDRNIKPSLSTY-----------------------------------R 489
S+ DAL MV N +PS+ +
Sbjct: 76 SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI C C + AVS+M +M + G+ PD+ LING C E + +A L
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ SYN V N ++G+ + + ++ + PN +T +I SL K
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCK 248
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 234/456 (51%), Gaps = 18/456 (3%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+L C++ + AL F+ V ++ Y I+H+L ++ A ++ +L++ ++
Sbjct: 44 ILTCRTAN-QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQK 102
Query: 159 ------CPHSVDVFQDLISCTEDCN------WAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
C +V L S N A+ ++GL+ E+ + K +DV P++
Sbjct: 103 SRRSRICCSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYK-MDV--LPAMQ 159
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L+GL+K D W+VY +M G PN T+ L C+ GD K +++
Sbjct: 160 ACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEM 219
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E+ P +V Y LI C + R+++A ++R M +LP+L TY T+M+G CK V
Sbjct: 220 IEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHV 279
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++A +L+ M+ GL P++V++ LI CK +M ++ L +M G+ P+ F +
Sbjct: 280 KKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCL 339
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G L AL+L E+++ + Y LI LC +R A LL+ + + G+
Sbjct: 340 IDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P+ YN L++ CK ++ A+ + +M ++ I+P++ T+ LI +C G+ A+
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
L EM+ G+LPD LI+G+ KD N EA
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHF--KDGNTKEAF 493
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 192/399 (48%), Gaps = 13/399 (3%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ FR + G P++ + N +++G K+ + + ++Y EM G+ PN TF I
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK ++ FL + G P++ YN LI YCK G L++A L+ + +
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+LPD+ TY+ L+ GLC ++ EA L M +G P+ V+YNTLI YCKEG M+++
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ +M GI P+ T ++ GY K G++ +A+ L E+ G+ Y LI
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL------------K 473
+D A L + + + G P++ + L++ LCK ++DA+ L K
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543
Query: 474 DEMVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+DR++ P+ Y ALI C GR +A +M SG+ PD C V+I G+
Sbjct: 544 TNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFR 603
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ L K I ++ Y + + E G L
Sbjct: 604 AMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYL 642
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 119/240 (49%), Gaps = 13/240 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + ++ + + + G +P+I++ + L++G K ++ +Y EM G+ P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + L K+G+ + ++++E G P++ T + LI CK GR++DA L+
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 299 RI-------------MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ R P+ V YT L+ GLC +G++ +A + F M GL PD+
Sbjct: 532 LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+ +I + + +++ L +++ GI P++ +++ +GY + G L SAL+ E
Sbjct: 592 FTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 81/201 (40%), Gaps = 21/201 (10%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + FR+ QP IV+ L+ L +D ++ + G+ + N L
Sbjct: 732 KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 791
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-- 305
+++ K G++ + +++ D+ T+ ++I + G+ +A L+ M N
Sbjct: 792 NMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKR 847
Query: 306 --------------VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNT 350
VLP+ VT+ ++ G V E Q F M L P I +
Sbjct: 848 ARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 907
Query: 351 LIFAYCKEGKMQESKSLLYEM 371
++ C+ G + E+ + +M
Sbjct: 908 MVDLLCRAGLLTEAYEFILKM 928
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R N A L+R M + PD+VT T ++ G + + + HRGL D+ N
Sbjct: 729 RPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN 788
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+LI Y K G++ ++ L + T+T I+ G+ G+ AL L E++
Sbjct: 789 SLINMYSKCGEIGTARRLFDGTQKKDV--TTWTSMIV--GHALHGQAEEALQLFTEMK 842
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 238 PNTHTFNILTHVFCKNGD--VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
P+ H + GD +K +++ + PD+VT +S+ G L+
Sbjct: 710 PSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGE 769
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+++ + R + DL +L+N K G++ A +LF + D+ ++ ++I +
Sbjct: 770 WIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGH 825
Query: 356 CKEGKMQESKSLLYEM 371
G+ +E+ L EM
Sbjct: 826 ALHGQAEEALQLFTEM 841
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 202/403 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+N LN + V ++ ++G+ P+T TF L C G +
Sbjct: 97 GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDA 156
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ EGF P++VTY TLI+ CK G N A L R M + N PD+V YT++++
Sbjct: 157 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDS 216
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF +MV +G+SPDI +Y +LI + C + + +LL +M+ + I PD
Sbjct: 217 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG++ A ++V + GV + Y+ L+ C + A + +
Sbjct: 277 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 336
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +GY P++ YN L+ CK + A L +EM + + P+ TY L+ C +G
Sbjct: 337 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVG 396
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ G +PD R+L++ C + +++A ALL D + Y
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 456
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
V + G+L ++ G PN T MI+ L +
Sbjct: 457 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 499
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 196/417 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ F K + GFQP++V+ L+NGL K+ + ++ M + P+ +
Sbjct: 151 GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVY 210
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ CK+ V + K+ +G PD+ TY +LI S C L M
Sbjct: 211 TSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMIN 270
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++PD+V ++T+++ LCKEGK+ EAH + M+ RG+ P++V+YN L+ +C + +M E
Sbjct: 271 SKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDE 330
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + M+ NG P+ + ++ GY K R+ A L E+ + + + Y+ L+
Sbjct: 331 AVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 390
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC R A +L + G +P L Y L++ LCK + +A+ L + N+ P
Sbjct: 391 GLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDP 450
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C G A + + G+ P+ + ++ING C +++A L
Sbjct: 451 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLF 510
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D +YN + ++ + + ++L + L GF+ + T ++ L
Sbjct: 511 MEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 186/389 (47%), Gaps = 4/389 (1%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N +D + M + P+T FN L K V +++ G PD+
Sbjct: 43 LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 102
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C R AF + + + + PD T+TTL+ GLC EGK+ +A LF +
Sbjct: 103 YTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDK 162
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P++V+Y TLI CK G + LL M PD I+ K+ +
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 222
Query: 396 LLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A NL ++ G IS DI+ Y LI +LC T+LL ++ +P + I+
Sbjct: 223 VTEAFNLFSKM--VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 280
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ ++++LCK + +A + D M+ R ++P++ TY AL+ C EAV + D M+
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G P+ LINGYC + ++KA L +K I +T +YN + + G L
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + G P+ T + ++ L K
Sbjct: 401 AIALFHEMVAHGQIPDLATYRILLDYLCK 429
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 124/241 (51%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K F + G+ P+++S N L+NG K+ +D+ ++EEM + + PNT T+N L
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C G + ++ G PDL TY L+ CKK L++A L + + N+
Sbjct: 390 HGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 449
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ YT +++G+C+ G++ A +F + +GL P++ +Y +I C+ G + E+ L
Sbjct: 450 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM GNG PD T I QG + L A+ L+ E+ G S L+ LC
Sbjct: 510 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 569
Query: 428 D 428
D
Sbjct: 570 D 570
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 149/310 (48%), Gaps = 12/310 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G I E+ + G +P++V+ N L++G + +D+ +V++ M G P
Sbjct: 286 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 345
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++N L + +CK +DK E++ ++ P+ VTYNTL+ C GRL DA L+
Sbjct: 346 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALF 405
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +PDL TY L++ LCK+ + EA L + + PDI Y +I C+
Sbjct: 406 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++ ++ + + G+ P+ T I++ G + G L A L +E+ G S Y
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ + L Q+ A LL+ + G+ + L+E LC D+ +D
Sbjct: 526 NTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC------------DDKLD 573
Query: 479 RNIKPSLSTY 488
+++K LS +
Sbjct: 574 QSVKQILSEF 583
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 156/327 (47%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+++N S L+DA + M + P V + L+ + K + L ++
Sbjct: 33 LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G+ PD+ + N LI ++C + + S+L +++ G+ PDT T +++G EG+
Sbjct: 93 MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL+L ++ G + Y LI LC+ AA LL + Q P + +Y
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++SLCK V +A L +MV + I P + TY +LI C + +L+++M+ S
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++PD I +++ C E + +A ++ + + +YNA+ + ++ + +
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + G+APN ++ +I+ K
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCK 359
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 237/521 (45%), Gaps = 61/521 (11%)
Query: 86 LLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFA 145
LL HL E L+ C +F W + + +C ++H+LA ++
Sbjct: 76 LLQHLFNSEAQPDLILC---------YFKWTQKEFGAIHNVEQFCRLLHLLANAKNYN-- 124
Query: 146 MKMLCELVELVKDCPHS-VDVFQDL-ISCTEDCN---------WAYVKVGLIRESFKTFR 194
K+ L K+ +S +F L + + C WAYVK G + + + F
Sbjct: 125 -KIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFD 183
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ D GF+ S +SCN +L L+K I VY+EM R I N TF+++ + CK G
Sbjct: 184 RAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVG 243
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
K +E ++ GF P ++TYNT+I YCK G++ A L + M + + P+ +T+
Sbjct: 244 KFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFN 303
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++G C++ V A ++F M +GL P++V+YN+LI C GK+ E+ L +M G
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM 363
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ P+ T ++ G+ K+ L A
Sbjct: 364 GLKPNVVTYNALINGFCKKKMLKEA----------------------------------- 388
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+L+ IG+ G P++ +N L+++ K + DA LL+ M+D + P++STY LI
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG---FFAKKFQ 551
FC G EA L EM +G+ D +L++ C + + KA LL KK +
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGR 508
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ +YN + F G L + L L G PN T
Sbjct: 509 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 153/329 (46%), Gaps = 19/329 (5%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLR---CQSD 105
+ F P N I+D C + K + L + K + P+ EI+ +L C+ +
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPN----EITFNILIDGFCRDE 313
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
+V+A ++P Y +++ L N K A+ + ++ + +V
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM--GLKPNVVT 371
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+ LI+ + K +++E+ + G P++++ N L++ K +D +
Sbjct: 372 YNALIN-------GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ M G+CPN T+N L FC+ G+V + +++E G DLVTYN L+ +
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 286 CKKGRLNDAFYL---YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
CKKG A L +M ++ ++VTY L+ G C +GK+ EA++L + M+ +GL
Sbjct: 485 CKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 544
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
P+ +Y+ L ++G + + LY +
Sbjct: 545 PNRTTYDILRDEMMEKGFIPDIDGHLYNV 573
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%)
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L++AY K G+M + G +C ++ KEGR+ ++ E+ R
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ ++ +D +I LC+ + A ++E + G+ PS+ YN +++ CK + A
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EMV + I P+ T+ LI FC A + +EM G+ P+ LING
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C +++A L + + +YNA+ N F + L + E+ + G APN
Sbjct: 345 CSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNV 404
Query: 591 LTCKYMIHSLWKG 603
+T +I + K
Sbjct: 405 ITFNTLIDAYGKA 417
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 106/224 (47%)
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
++ ++V Y K G + AL +G +S + ++V+L ++ R S+
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + ++ ++ ++ LCK A + ++M PS+ TY +I +C
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ +A +L+ EM+ + P+ +LI+G+C +++V A+ + ++ + +Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N++ N +G L + + LQ + +G PN +T +I+ K
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 207/421 (49%), Gaps = 3/421 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ E+ + F + GF P +CN +L L +LN I+ W Y +M R+ I N +TFN
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFN 229
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I+ +V CK G + K GFL +E G P +VTYNTL+ + +GR+ A + M +
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+ TY +++ +C EG+ A ++ M GL PD VSYN LI G ++ +
Sbjct: 290 GFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ EM+ G+ P +T ++ G E ++ +A L+ E++ G+ + Y+ LI
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
CQ A +L + + DG P+ Y L+ LC+ + +A L +++V + +KP
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
L L+ C IG A SL+ EM + PD L+ G C E +A L+G
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
++ D SYN + + +++ GD ++ L LGF P LT ++ L K
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 605 E 605
E
Sbjct: 587 E 587
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 12/391 (3%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ + F + IKPT Y +V + + A ++ E+ K
Sbjct: 236 CKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS--KGFQP 293
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + ++S CN + + R+ ++G P VS N L+ G +
Sbjct: 294 DMQTYNPILSWM--CNEG--------RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ + +EM + G+ P +T+N L H ++ + +I E+G D VTYN L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ YC+ G AF L+ M + P TYT+L+ LC++ K REA +LF ++V +G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V NTL+ +C G M + SLL EM I PD T +++G EG+ A
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ E++R G+ Y+ LI + A + + + G+ P+L YN L++ L
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
K A L EM I P+ S++ ++I
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 4/328 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GFQP + + N +L+ + + +V EM IG+ P++ ++NIL NGD++
Sbjct: 290 GFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++ ++G P TYNTLI + ++ A L R + + ++ D VTY L+NG
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+ G ++A L M+ G+ P +Y +LI+ C++ K +E+ L +++G G+ PD
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
++ G+ G + A +L+ E+ ++ Y+ L+ LC + + A L+
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P YN L+ K A +++DEM+ P+L TY AL+
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 500 RSGEAVSLMDEMLESGMLP-DSQICRVL 526
A L+ EM G++P DS C V+
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 180/401 (44%), Gaps = 32/401 (7%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T F++L C+ VD+ ++E+GF P T N +++ + R+ +A+ Y
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
MYR + ++ T+ ++N LCKEGK+++A M G+ P IV+YNTL+ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI- 417
G+++ ++ ++ EM G PD T I+ EGR L + E+ S+S +I
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333
Query: 418 -------------------------------YDYLIVALCQDNRPFAATSLLERIGQDGY 446
Y+ LI L +N+ AA L+ I + G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
V YN L+ C+ A L DEM+ I+P+ TY +LI C ++ EA
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L ++++ GM PD + L++G+C ++++A +LL D +YN +
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+G + EL R G P++++ +I K + K
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 160/331 (48%), Gaps = 9/331 (2%)
Query: 135 ILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFR 194
IL+W A ++L E+ E + P SV + C+ + G + +F
Sbjct: 301 ILSWMCNEGRASEVLREMKE-IGLVPDSVSYNILIRGCSNN--------GDLEMAFAYRD 351
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ + G P+ + N L++GL N I+ + E+ GI ++ T+NIL + +C++G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
D K +++ +G P TY +LI C+K + +A L+ + + + PDLV
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
TLM+G C G + A L M ++PD V+YN L+ C EGK +E++ L+ EM
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
GI PD + ++ GY K+G A + E+ G + + Y+ L+ L ++ A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
LL + +G VP+ + ++E++ D+
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 213/421 (50%), Gaps = 1/421 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + + G V+ N L++G + + Q+ +M R + P+ +
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL CK G + + G L + + G PD+VTYN L+ YC + +++A L+ M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R + PD++ Y L++G CK V EA LF + ++ L P I SYN+LI C G++
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
K LL EM G+ PD T I++ KEGR+L AL ++V + + GV + Y+ +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C N A + R+ + G P + YN L+ CK + V +A++L EM +N+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +++Y +LI C +GR L+DEM +SG PD +L++ +C + +KA +
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + D + +A+ + + L + K L G +PN T +I++L
Sbjct: 567 LFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 602 K 602
K
Sbjct: 626 K 626
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 216/443 (48%), Gaps = 7/443 (1%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P VF L+ A V++G + F + G PSI + L+N +
Sbjct: 52 PPPTSVFDKLLG-------AIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQS 104
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ + + + G PN TFN + + FC NG + K F + + +G+ D TY
Sbjct: 105 HTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYG 164
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TLI+ K G++ A +L + M + +V P+LV Y+ L++GLCK+G V +A L ++ R
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ D V+YN+LI C G+ QE LL +M+ + PD +T I++ KEGR+L A
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
++ + + G Y+ L+ C A L R+ + G P + YN L++
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK V +A++L E+ ++N+ P++++Y +LI C GR L+DEM S PD
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+LI+ C E + +A +L KK + +YNA+ + + +++ ++
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFN 464
Query: 580 RFLRLGFAPNNLTCKYMIHSLWK 602
R ++ G P+ L +I+ K
Sbjct: 465 RMVKSGLEPDILNYNVLINGYCK 487
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 233/529 (44%), Gaps = 45/529 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+T FN + PTS L+ I+ + + A+ + +L K S+ F
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGH-YPTAISLFTQLQS--KGISPSIATFTI 95
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+C Y +F L G+QP++V+ N ++NG I +
Sbjct: 96 LINC-------YFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFC 148
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ + G + T+ L + KNG + L+++E+ P+LV Y+ LI CK
Sbjct: 149 QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKD 208
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++DA L + R +L D VTY +L++G C G+ +E QL +MV + PD ++
Sbjct: 209 GFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Query: 349 NTLIFAYCKEGKM-----------------------------------QESKSLLYEMMG 373
N LI A CKEG++ E++ L M+
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G+ PD +++ GY K + A+ L EL + + Y+ LI LC R
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
LL+ + P + YN L+++LCK + +AL + M+ + +KP++ TY A++
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMD 448
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
+C A + + M++SG+ PD VLINGYC + V++A L K I
Sbjct: 449 GYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIP 508
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D SYN++ + G + + EL G +P+ +T ++ + K
Sbjct: 509 DIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 175/367 (47%), Gaps = 36/367 (9%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + F + + G +P +++ N L++G K +D+ +++E+ + P ++N
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L C +G + V L+++ PD+VTYN LI + CK+GR+ +A + +M ++
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V P++VTY +M+G C V A +F+RMV GL PDI++YN LI YCK + E+
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAI 495
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM + PD + ++ G GR+ L+ E+ G S Y+ L+ A
Sbjct: 496 VLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555
Query: 426 CQDNRPF-AATSLLERIGQD----------------------------------GYVPSL 450
C+ +PF A SL +I + G P++
Sbjct: 556 CK-TQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+ Y L+ +LCK S +A+LL +M D + P T+ +I + +A L +E
Sbjct: 615 QTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREE 674
Query: 511 MLESGML 517
M+ G++
Sbjct: 675 MIARGLV 681
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 187/409 (45%), Gaps = 1/409 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G I E+ G +P IV+ N L+ G + + +++ M + G+ P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N+L +CK VD+ +++ + P + +YN+LI C GR++ L
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ PD+VTY L++ LCKEG++ EA + M+ +G+ P+IV+YN ++ YC
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +K + M+ +G+ PD +++ GY K + A+ L E++ + Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC R LL+ + G P + YN L+++ CK A+ L ++V+
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P T A++ C + A + +L G P+ Q +LIN C + +
Sbjct: 574 -GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGE 632
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
A LL + D ++ + + + + K +L++ + G
Sbjct: 633 AMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 173/382 (45%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D + M R+ P T F+ L + G +++ +G P + T+
Sbjct: 36 VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ Y + AF L + + P+LVT+ T++NG C G + +A ++ +G
Sbjct: 96 LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
D +Y TLI K G+++ + LL EM + + P+ ++ G K+G + AL
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L ++ G+ + Y+ LI C R T LL ++ ++ P +N L+++L
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + +A + M R KP + TY AL+ +C EA L + M++ G+ PD
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDV 335
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
VLI+GYC K V++A L K + SYN++ + G +S + +L
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
P+ +T +I +L K
Sbjct: 396 MHGSAQPPDVVTYNILIDALCK 417
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 149/317 (47%)
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C+ ++DA + M R P + L+ + + G A LF ++ +G+SP I
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++ LI Y + + SLL ++ +G P+ T I+ G+ G + AL+
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
L G + Y LI L ++ + AA LL+ + + P+L +Y+ L++ LCK
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V+DAL L ++ +R I TY +LI C +GR E L+ +M+ + PD +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI+ C E + +A+ +L +K+ + D +YNA+ + ++ + EL R ++ G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Query: 586 FAPNNLTCKYMIHSLWK 602
P+ L +I K
Sbjct: 331 LEPDVLNYNVLIDGYCK 347
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%)
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C+ +V DA+ + MV P S + L+ +G A+SL ++ G+ P
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+LIN Y + A +LL K + ++N + N F +G + K ++ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGMERK 607
L G+ + T +I+ L K + K
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIK 177
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 247/513 (48%), Gaps = 23/513 (4%)
Query: 95 ISRVLLRCQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
I V+L+ Q D L FF W ++ + T+ ++ LA N S +L+
Sbjct: 57 IRSVILQNQVGDPKRLLNFFYWSQHKMGTS-TAQQDLDVLSALAVNLCNSNWYGPASDLI 115
Query: 154 E-LVKDCPHSVDVFQDLISCTEDCNWA------------YVKVGLIRESFKTFRKTLDVG 200
+ ++++ + V ++ C CN + Y K+G + E+ F +
Sbjct: 116 KCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE 175
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
F+PS++SCN LL LLK N ++ W+V++ M + P+ +T+ + CK G+V
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L ++ E+G P+LVTYN +I C+ L++A L R M + ++PDL TY L+NG
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C E + REA + M+ GL P+ ++YN LI + ++G ++++ + EM+ GI +
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANL 355
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
++ G K G++ AL ++ E+ GV Y LI C+ A LL+
Sbjct: 356 IIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDE 415
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + P++ Y+ ++ LC+C ++ + EMV +KP+ Y L+ GR
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
E+ +++ M E G+LPD LI G+C K + +A L ++ + +Y A
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535
Query: 561 VFNMFAEDGDLSKLMELQKRF----LRLGFAPN 589
+ +++ G+ ME+ R+ L G PN
Sbjct: 536 FIDGYSKAGE----MEIADRYFNEMLSCGVLPN 564
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 222/443 (50%), Gaps = 11/443 (2%)
Query: 159 CPHSV--DVFQ--DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
C H V DV+ ++IS A+ KVG ++++ + + + G P++V+ N ++ G
Sbjct: 207 CAHKVLPDVYTYTNMIS-------AHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L + +D+ ++ M G+ P+ +T++IL + FC + L ++ + G P+
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+TYN LI + ++G + AF + M + +L+ + TL+NG+CK GK+ +A ++
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M+ +G+ PD +Y+ LI +C+ M + LL EM + P T +I+ G + G
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCG 439
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
L ++ E+ G+ + +Y L+ A ++ R + +LER+ + G +P + YN
Sbjct: 440 NLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYN 499
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ CK + +A EM++R ++P+ TY A I + G A +EML
Sbjct: 500 SLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC 559
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+LP+ I LI G+C E +V +A ++ F + + D ++Y+ + + + +G + +
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619
Query: 575 MELQKRFLRLGFAPNNLTCKYMI 597
+ G PN T +I
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLI 642
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 206/415 (49%), Gaps = 1/415 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + + + F + L G P++ L+ G K + + + V+ + +
Sbjct: 539 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ 598
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+++L H +NG + + G +++E+G P+ TYN+LIS CK+G ++ A L
Sbjct: 599 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 658
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+VTY L++GLCK G++ A LF + RGL+P+ V+Y ++ YCK
Sbjct: 659 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 718
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ LL EM+ G+ PD F +I+ KE + AL+L E+ G + S +
Sbjct: 719 KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSF 777
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ + A LLE + + ++P+ Y L++ CK + +A L EM +
Sbjct: 778 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 837
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ P+ TY +L+ + IG E +L +EM+ G+ PD V+I+ YC E +V +
Sbjct: 838 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 897
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
A L K +Y+A+ + + ++++L GF TC
Sbjct: 898 ACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTC 952
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 237/479 (49%), Gaps = 10/479 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ PT Y +I++ L +L E+V + P++V V+ L++ A+
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMV-MNGLKPNAV-VYTTLMT-------AH 470
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + ES + + G P + N L+ G K +++ EM + PN
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
HT+ + K G+++ + + ++ G P++ Y LI +CK+G + +AF ++R
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ R VL D+ TY+ L++GL + GK+ EA +F + +GL P+ +YN+LI CK+G
Sbjct: 591 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 650
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ LL EM GI PD T I++ G K G + A NL +++ G++ + Y
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C+ P AA LLE + G P IYN ++ CK + AL L EM+++
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++S + LI +C G+ EA L++EM+E +P+ LI+ C + +A+
Sbjct: 771 FASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 829
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L ++ + ++Y ++ + + G++S++ L + + G P+ +T MI +
Sbjct: 830 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 888
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/575 (24%), Positives = 253/575 (44%), Gaps = 47/575 (8%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ LP+ ++ C D+ LL+ K P+L + + L C++ +
Sbjct: 209 HKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL-CRARLLD 267
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQ 167
D + P Y ++++ + A ML E++++ +K P + +
Sbjct: 268 EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D +++ G I ++F+ + + G + +++ N LLNG+ K +++ ++
Sbjct: 328 D----------GFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 377
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+EM G+ P++ T+++L C+ ++ + L+++++ P ++TY+ +I+ C+
Sbjct: 378 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 437
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G L + R M + P+ V YTTLM KEG+V E+ + RM +G+ PD+
Sbjct: 438 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 497
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+LI +CK +M+E+++ L EM+ + P+ T + GY K G + A E+
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATS-----LLERIGQD------------------ 444
GV + IY LI C++ A S L R+ QD
Sbjct: 558 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 617
Query: 445 ------------GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
G +P+ YN L+ CK +V A L +EM + I P + TY LI
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G A +L D++ G+ P+ +++GYC K+ A LL +
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 737
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
D YN + N ++ K ++L + L GFA
Sbjct: 738 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA 772
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 198/405 (48%), Gaps = 2/405 (0%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P++++ + ++NGL + + + EM G+ PN + L K G V++
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
LE++ E+G PD+ YN+LI +CK R+ +A M R + P+ TY ++G
Sbjct: 481 MILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY 540
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K G++ A + F+ M+ G+ P++ Y LI +CKEG + E+ S+ ++ + D
Sbjct: 541 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 600
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T +++ G + G++ A + ELQ G+ + Y+ LI C+ A+ LLE
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G P + YN L++ LCK + A L D++ R + P+ TY A++ +C
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L++EML G+ PD+ I V++N C E+ KA L +K T S+N
Sbjct: 721 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNT 779
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI-HSLWKGM 604
+ + + G L + L + + F PN++T +I H+ GM
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 183/374 (48%), Gaps = 1/374 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+F F + + G P+ + N L++G K +D+ Q+ EEM GI P+ T+
Sbjct: 614 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 673
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL CK G++++ + IE G P+ VTY ++ YCK AF L M
Sbjct: 674 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 733
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R V PD Y ++N CKE K +A LF M+ +G + VS+NTLI YCK GK+QE
Sbjct: 734 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQE 792
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL EM+ P+ T ++ K G + A L +E+Q V + Y L+
Sbjct: 793 ANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLH 852
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
++L E + G P Y ++++ C+ +V +A LKDE++ + +
Sbjct: 853 GYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPM 912
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
S++ Y ALI C E + L++E+ ESG C V+ G+ + ++++A +L
Sbjct: 913 SVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVL 972
Query: 544 GFFAKKFQIYDTES 557
K + +T S
Sbjct: 973 RSMVKFGWVSNTTS 986
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 33/415 (7%)
Query: 86 LLPHLGAHEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
+LP++G + + + C+ +V+ A + F ++ + ++ + Y +++H L+ N K
Sbjct: 561 VLPNVGIY-TALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT-YSVLIHGLSRNGKMHE 618
Query: 145 AMKMLCELVE-------------LVKDCPH-SVDVFQDLIS--CTEDCNWAYV------- 181
A + EL E + C +VD L+ C + N V
Sbjct: 619 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILID 678
Query: 182 ---KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K G I + F G P+ V+ +++G K +Q+ EEM G+ P
Sbjct: 679 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 738
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N++ + CK +K +++ E+GF V++NTLI YCK G+L +A +L
Sbjct: 739 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLL 797
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + +P+ VTYT+L++ CK G + EA +L+ M R + P +Y +L+ Y
Sbjct: 798 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI 857
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M E +L EM+ GI PD T +++ Y +EG ++ A L E+ G+ +S Y
Sbjct: 858 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAY 917
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGY---VPSLEIYNELMESLCKCDSVADAL 470
D LI ALC+ F LL IG+ G+ +P+ + + D A+ L
Sbjct: 918 DALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVL 972
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 253/545 (46%), Gaps = 20/545 (3%)
Query: 73 DSHLTLLQNDLKPLLPHLGAHE-----ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSS 127
+S + LQ D PHL +S+ L++ + D SAL FF + +
Sbjct: 74 ESMRSFLQQDG----PHLSDSALAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAE 129
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY------- 180
+YC++ HIL + A ++ E + L ++ P D F L S C +
Sbjct: 130 SYCVLAHILFCGMFYLDARSVIKEWILLGREFP-GCDFFDMLWSTRNVCRPGFGVFDTLF 188
Query: 181 ---VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
V +G++ E+ + F K P + SCN LL+ L K + +++M G+
Sbjct: 189 NVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLS 248
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+N++ + GD++ E+++ +G PD+VTYN+LI Y K G L A +
Sbjct: 249 PSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSV 308
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M PD++TY +L+N CK ++ +A + H M RGL P++V+Y+TLI A+CK
Sbjct: 309 FEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCK 368
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + E+ +M+ G+ P+ FT ++ K G L A L E+Q+ GV+++
Sbjct: 369 AGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT 428
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ LC+D R A L + + G+ + +IY L K + A+ + +EM
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+N+KP L Y I C ++++++ EM++ G+ +S I LI+ Y
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A LL +Y + + + G + + + R G PN + +I
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608
Query: 598 HSLWK 602
L K
Sbjct: 609 DGLCK 613
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 242/522 (46%), Gaps = 52/522 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P+ Y +++ LA A + E+ K + + LI Y
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMK--AKGLRPDIVTYNSLID-------GYG 297
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG++ + F + D G +P +++ N L+N K I Q ++ M + G+ PN
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L FCK G + + N F + G P+ TY +LI + CK G LN+AF L M
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--------------------- 340
+ V ++VTYT L++GLC++G++REA +LF ++ G
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477
Query: 341 --------------LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
L PD++ Y T I+ C++ ++++S +++ EMM G+ +++ +
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTL 537
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ Y K G+ A+NL+ E+Q G+ I+ Y LI LC+ A + + ++G
Sbjct: 538 IDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ IY L++ LCK D + +A L +EM+D+ I P Y +LI G GEA+S
Sbjct: 598 QPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALS 657
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L + M+E GM D LI G+ V A++LL +K I D + +
Sbjct: 658 LRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYY 717
Query: 567 EDGDLSKLMELQKRFLRLGF--------APNNLTCKYMIHSL 600
E GD+++ + L R G P+ LT +H L
Sbjct: 718 ELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKL 759
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C DC + E+ F + LD G P + L++G +K + + M
Sbjct: 612 CKNDC---------LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRM 662
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
IG+ + + L F + G V L+++ +G PD V L+ Y + G +
Sbjct: 663 VEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDI 722
Query: 292 NDAFYLYRIMYRRNVL--------PDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N+A L+ M RR ++ P +T T ++ LC ++ FHR +
Sbjct: 723 NEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLC----ASQSGTDFHRTAN 773
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 162/567 (28%), Positives = 259/567 (45%), Gaps = 30/567 (5%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALT 111
+P P I+DLI SS HL + + P L IS L A
Sbjct: 7 IPTELTPRTILDLIHSSQWHFIKHLA---HKITPSL-------ISTALTSLHKTPDLAFQ 56
Query: 112 FFNWVK-NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV-DVFQDL 169
F + DL+IK +I H A N+K S + L E + +S+ +VF +L
Sbjct: 57 FVTHIGFGDLDIKSKCLAMAVISH--APNSKPSLQL-----LKETINSGVYSIREVFNEL 109
Query: 170 ISCTEDCNW-AYVKVGLI----------RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
YV L+ ++F+ F G P + +CN +L+ LK
Sbjct: 110 GVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKS 169
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N ++ W +Y EM R+ I + TFNI+ +V CK G + K F+ +E G P++VTY
Sbjct: 170 NRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTY 229
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NT+I YC +GR+ A ++ +M R V PD TY + ++G+CKEGK+ EA + +M
Sbjct: 230 NTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKE 289
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
GL P V+YNTLI YC +G ++ + +M+ G+ P T +++ + ++
Sbjct: 290 IGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDE 349
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A ++ E+ G+ Y+ LI C+ A +L + + G P+ Y L+
Sbjct: 350 ADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIY 409
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
L K + A L +++V + I P L + ALI C G A +++ EM + ++P
Sbjct: 410 VLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVP 469
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D L+ G C E V A L+ + D SYN + + +++ GD+ ++
Sbjct: 470 DEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVR 529
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKGME 605
L +GF P LT +I L K E
Sbjct: 530 DEMLSIGFNPTLLTYNALIQGLCKNEE 556
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 177/345 (51%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G +P++V+ N +++G ++ +++ M G+ P+++T+ CK G +++
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+G LEK++E G P VTYNTLI YC KG L AF M R ++P + TY L++
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
L + K+ EA + M +GL PD V+YN LI YC+ G ++++ +L EM+ GI P
Sbjct: 340 ALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQP 399
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
T ++ K GR+ A +L ++ R G+ +++ LI C + A ++L
Sbjct: 400 TRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAML 459
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + Q VP +N LM+ C+ V A L +EM R IKP +Y LI +
Sbjct: 460 KEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKR 519
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
G +A + DEML G P LI G C ++ + AE LL
Sbjct: 520 GDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLL 564
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 144/270 (53%), Gaps = 13/270 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYV 181
PT S Y +++H L + K A ++ E+ E LV P SV + LI+ Y
Sbjct: 329 PTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV---PDSV-TYNILIN-------GYC 377
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++++F + + G QP+ V+ L+ L K + Q ++E++ R GI P+
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L C NG++D+ L+++++ PD VT+NTL+ C++G++ A L M
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + PD ++Y TL++G K G +++A ++ M+ G +P +++YN LI CK +
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEG 557
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
++ LL EM+ GI P+ T +++G G
Sbjct: 558 DHAEQLLKEMISKGITPNDNTYLSLIEGIG 587
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 171/657 (26%), Positives = 293/657 (44%), Gaps = 95/657 (14%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPE--TQNPNKIV 62
S + +F F+S+ + SS+ LQ + P ++ P+ T +++
Sbjct: 25 SASRCNFLPFFLSRRWLTQSQRVPSSFLLQ----------TRPFPDYSPKKPTIRDTELI 74
Query: 63 DLICSSLKKGDSHLTLLQNDLKPLLPHLGAHE-------ISRVLLRCQSDSVSALTFFNW 115
I + +K S +PL L AHE + VL+ ++D L FF+W
Sbjct: 75 HDITAVIKLRRS---------EPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVLAFFDW 125
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVFQDLISCT 173
+ E P+ C+I+HI +N A ELV D +++ + T
Sbjct: 126 ARVRRE--PSLEARCIIIHIAVVSNDLRLAH-------ELVHDYFLNSKLEIGVKMTQFT 176
Query: 174 EDCNWAY-----------------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ Y V++G + E+ K K L G ++ SCN L+ +
Sbjct: 177 HRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIA 236
Query: 217 K-LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
I+ +V+ E G I NT ++NI+ + C+ G V + + L +++ PD+
Sbjct: 237 NNSEGIEMAIKVFCEYG---ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293
Query: 276 VTYNTLISSYCKKGRLNDAF---------------YLY--------------------RI 300
V+Y+T+I YC G L A Y Y R
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + ++PD V YTTL++G K G VR A++ F M+ + +SPD ++Y TLI + + GK
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E ++L +EM+ G+ PD T ++ Y K G +++A +L E+ + G++ + Y
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A LL+ + + G ++ IYN ++ +CK ++ A+ L EM
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P TY +I +C +G +A L+ EML+ G+ P VL+NG+CM + +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LLG+ +K + D +YN + ++ ++ KR G AP++ T +I
Sbjct: 594 RLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 185/396 (46%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G E+ K R+ + P V L++G KL + + ++EM I P+
Sbjct: 340 KIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYI 399
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L F + G V + ++ G PD VTY TLI YCK G + +AF L+ M
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTY L++GLCK G++ A++L M +GL ++ YN+++ CK G +
Sbjct: 460 VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ EM GI PD T ++ Y + G + A L+ E+ G+ + ++ L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C LL + + G VP YN LM+ C +S+ + M ++ +
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L EM+E G +P LI + +K + +A
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L + D E YN +M E+GD+ + L
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 231/492 (46%), Gaps = 18/492 (3%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
Y T + N I+ +C K ++H L+Q D + P + ++ + + C +
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYS-TVIDGYCHLGELK 310
Query: 109 -ALTFFNWVKNDLEIK---PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
AL + D++IK P Y I+ +L K A K+L E++ K P +V
Sbjct: 311 KALKLMD----DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS-QKIIPDNV- 364
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V+ LI + K+G +R + K F + L P ++ L+ G + + +
Sbjct: 365 VYTTLIH-------GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ EM G+ P+ T+ L V+CK G++ ++ + G P++VTY LI
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK G L+ A L M ++ + ++ Y +++NG+CK G + +A +L M G+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
++Y T+I AYC+ G + ++ LL EM+ G+ P T +++ G+ G L L+
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ G+ Y+ L+ C N T + +R+ G P YN L++ CK
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ +A L EM+++ P++++Y ALI F + EA L +EM G++ D +I
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYN 717
Query: 525 VLINGYCMEKDV 536
++ E DV
Sbjct: 718 FFVDMCYEEGDV 729
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 206/449 (45%), Gaps = 9/449 (2%)
Query: 136 LAWNN-KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW------AYVKVGLIRE 188
++WN ++ + LC L + VK+ H + + D S T D Y +G +++
Sbjct: 254 ISWNTTSYNIIIYSLCRLGK-VKEA-HRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ K G +P+ + N ++ L K+ + +V EM I P+ + L H
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIH 371
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
F K G V N + +++ + PD +TY TLI + + G++ + L+ M R + P
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D VTYTTL++ CK G++ A L + MV G++P+IV+Y LI CK G++ + LL
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ + +V G K G + A+ L+ E++ G+ Y +I A C+
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A LL+ + G P++ +N LM C + D L M+++ I P TY
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ C + M G+ PDS +LI G+C +++ +A L +
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
K + SYNA+ F + + + EL
Sbjct: 672 KGYVPTVTSYNALIKRFYKKKKILEAREL 700
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 153/301 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + +F + + +G P+IV+ L++GL K +D ++ +EM + G+
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +N + + CK G++++ ++++E G DPD +TY T+I +YC+ G ++ A L
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R + P +VT+ LMNG C G + + +L M+ +G+ PD ++YNTL+ +C
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M + + M G+ PD+ T I+++G+ K L A L E+ G + Y
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI + + A L E + G V EIYN ++ + V L L DE ++
Sbjct: 682 NALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
Query: 479 R 479
+
Sbjct: 742 K 742
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 171/657 (26%), Positives = 293/657 (44%), Gaps = 95/657 (14%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPE--TQNPNKIV 62
S + +F F+S+ + SS+ LQ + P ++ P+ T +++
Sbjct: 25 SASRCNFLPFFLSRRWLTQSQRVPSSFLLQ----------TRPFPDYSPKKPTIRDTELI 74
Query: 63 DLICSSLKKGDSHLTLLQNDLKPLLPHLGAHE-------ISRVLLRCQSDSVSALTFFNW 115
I + +K S +PL L AHE + VL+ ++D L FF+W
Sbjct: 75 HDITAVIKLRRS---------EPLHRILKAHESNFRYDHLIWVLMNIKNDYNLVLAFFDW 125
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVFQDLISCT 173
+ E P+ C+I+HI +N A ELV D +++ + T
Sbjct: 126 ARVRRE--PSLEARCIIIHIAVVSNDLRLAH-------ELVHDYFLNSKLEIGVKMTQFT 176
Query: 174 EDCNWAY-----------------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ Y V++G + E+ K K L G ++ SCN L+ +
Sbjct: 177 HRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIA 236
Query: 217 K-LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
I+ +V+ E G I NT ++NI+ + C+ G V + + L +++ PD+
Sbjct: 237 NNSEGIEMAIKVFCEYG---ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDV 293
Query: 276 VTYNTLISSYCKKGRLNDAF---------------YLY--------------------RI 300
V+Y+T+I YC G L A Y Y R
Sbjct: 294 VSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLRE 353
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + ++PD V YTTL++G K G VR A++ F M+ + +SPD ++Y TLI + + GK
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E ++L +EM+ G+ PD T ++ Y K G +++A +L E+ + G++ + Y
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A LL+ + + G ++ IYN ++ +CK ++ A+ L EM
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P TY +I +C +G +A L+ EML+ G+ P VL+NG+CM + +
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LLG+ +K + D +YN + ++ ++ KR G AP++ T +I
Sbjct: 594 RLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 231/492 (46%), Gaps = 18/492 (3%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
Y T + N I+ +C K ++H L+Q D + P + ++ + + C +
Sbjct: 252 YGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYS-TVIDGYCHLGELK 310
Query: 109 -ALTFFNWVKNDLEIK---PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
AL + D++IK P Y I+ +L K A K+L E++ K P +V
Sbjct: 311 KALKLMD----DMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMS-QKIIPDNV- 364
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V+ LI + K+G +R + K F + L P ++ L+ G + + +
Sbjct: 365 VYTTLIH-------GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ EM G+ P+ T+ L V+CK G++ ++ + G P++VTY LI
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK G L+ A L M ++ + ++ Y +++NG+CK G + +A +L M G+ PD
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
++Y T+I AYC+ G + ++ LL EM+ G+ P T +++ G+ G L L+
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ G+ Y+ L+ C N T + +R+ G P YN L++ CK
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ +A L EM+++ P++++Y ALI F + EA L +EM G++ D +I
Sbjct: 658 NLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYN 717
Query: 525 VLINGYCMEKDV 536
++ E DV
Sbjct: 718 FFVDMCYEEGDV 729
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 184/396 (46%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G E+ K R+ + P V L++G KL + + ++EM I P+
Sbjct: 340 KIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYI 399
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L F + G V + ++ G PD VTY TLI YCK G + +AF L+ M
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTY L++GLCK G++ A++L M +GL ++ YN+++ CK G +
Sbjct: 460 VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ EM GI PD T ++ Y + G + A L+ E+ G+ + ++ L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C LL + + G VP YN LM+ C +S+ + M ++ +
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L EM+E G +P LI + ++ +A
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L + D E YN +M E+GD+ + L
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNL 735
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 205/449 (45%), Gaps = 9/449 (2%)
Query: 136 LAWNN-KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW------AYVKVGLIRE 188
++WN ++ + LC L + VK+ H + + D S T D Y +G +++
Sbjct: 254 ISWNTTSYNIIIYSLCRLGK-VKEA-HRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKK 311
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ K G +P+ + N ++ L K+ + +V EM I P+ + L H
Sbjct: 312 ALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIH 371
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
F K G V N + +++ + PD +TY TLI + + G++ + L+ M R + P
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D VTYTTL++ CK G++ A L + MV G++P+IV+Y LI CK G++ + LL
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ + +V G K G + A+ L+ E++ G+ Y +I A C+
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A LL+ + G P++ +N LM C + D L M+++ I P TY
Sbjct: 552 GDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY 611
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ C + M G+ PDS +LI G+C +++ +A L +
Sbjct: 612 NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIE 671
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
K + SYNA+ F + + EL
Sbjct: 672 KGYVPTVTSYNALIKRFYKKRKFXEAREL 700
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 153/301 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + +F + + +G P+IV+ L++GL K +D ++ +EM + G+
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +N + + CK G++++ ++++E G DPD +TY T+I +YC+ G ++ A L
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R + P +VT+ LMNG C G + + +L M+ +G+ PD ++YNTL+ +C
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M + + M G+ PD+ T I+++G+ K L A L E+ G + Y
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI + + A L E + G V EIYN ++ + V L L DE ++
Sbjct: 682 NALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
Query: 479 R 479
+
Sbjct: 742 K 742
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 155/519 (29%), Positives = 252/519 (48%), Gaps = 24/519 (4%)
Query: 83 LKPLLPH-LGAHEISRVLLR----CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILA 137
LKP + L + I ++LLR C S+S FF WV+ + K + + ++ IL
Sbjct: 21 LKPKISSSLTSKSIHQILLRLSFYCSGPSLS-WAFFKWVELIPDYKHSLQSSWAMIFILT 79
Query: 138 WNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED-------CNW---AYVKVGLIR 187
+ F A +L ++ KD S V L++ ++ +W YV + +
Sbjct: 80 EHKHFKTAQGLLEKIAH--KDFISSPLVLNALVTSYDNPDVNAHILSWLMIIYVNCKMPQ 137
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + GF+P++ +C LLN L K D W+ Y++M R+G+ PN H +N+L
Sbjct: 138 DAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLI 197
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H CK+GDV+K + ++E + PDL TYNTLIS Y +K +A + M R V
Sbjct: 198 HACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVS 257
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+VTY +L+ G CKEGK+REA +LF + + +SP+ V+Y TLI YC+ +E+ L
Sbjct: 258 PDIVTYNSLIYGFCKEGKMREAVKLFREI--KDVSPNHVTYTTLIDGYCRVNDFEEALRL 315
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M G++ T +++ +EGR+ A L+ E+ V + LI A C+
Sbjct: 316 CKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINAYCK 375
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+A + ++ G Y L+ C + A L M+D + P T
Sbjct: 376 IGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCT 435
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L+ +C +G G +SL+DE L G D +CR LI C ++ V AE +
Sbjct: 436 YSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGFAEKIYSTMH 495
Query: 548 KKFQIYDTESYNAVFNMFAEDGD---LSKLM-ELQKRFL 582
+ D+ Y ++ + +DG +S+++ E+ KR L
Sbjct: 496 LRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSL 534
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 150/359 (41%), Gaps = 58/359 (16%)
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSY-------------------CKKGRLNDAFYLYR 299
G LEKI + F + N L++SY CK + DA +
Sbjct: 87 AQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAHILSWLMIIYVNCKMPQ--DAIQVLE 144
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M P+L T L+N L K+ + + +M+ G+ P+I YN LI A CK G
Sbjct: 145 YMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSG 204
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++++ L+ EM ++PD +T ++ Y ++ AL + ++R GVS Y+
Sbjct: 205 DVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYN 264
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C++ + A L I P+ Y L++ C+ + +AL L M +
Sbjct: 265 SLIYGFCKEGKMREAVKLFREIKDVS--PNHVTYTTLIDGYCRVNDFEEALRLCKVMEAK 322
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ ++TY +++ C GR +A L++EM E + PD+ C LI
Sbjct: 323 GLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLI------------ 370
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
N + + GD+ ++++ + L G ++ T K +IH
Sbjct: 371 -----------------------NAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIH 406
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 141/341 (41%), Gaps = 32/341 (9%)
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPD----LVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+S YC L+ AF+ + ++PD L + ++ L + + A L ++
Sbjct: 41 LSFYCSGPSLSWAFFKWV-----ELIPDYKHSLQSSWAMIFILTEHKHFKTAQGLLEKIA 95
Query: 338 HRGL---------------SPD----IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
H+ +PD I+S+ +I+ CK Q++ +L M +G P
Sbjct: 96 HKDFISSPLVLNALVTSYDNPDVNAHILSWLMIIYVNCKMP--QDAIQVLEYMRLHGFKP 153
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ C +++ K+ + ++ R GV + IY+ LI A C+ A L+
Sbjct: 154 NLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIYNVLIHACCKSGDVEKAEQLV 213
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ P L YN L+ + +AL ++D M + P + TY +LI FC
Sbjct: 214 CEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKE 273
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ EAV L E+ + P+ LI+GYC D +A L K +Y
Sbjct: 274 GKMREAVKLFREIKDVS--PNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATY 331
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
N+V E+G + +L P+N+TC +I++
Sbjct: 332 NSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTLINA 372
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 79/199 (39%), Gaps = 17/199 (8%)
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL-----------------CKC 463
+I L + A LLE+I ++ S + N L+ S C
Sbjct: 74 MIFILTEHKHFKTAQGLLEKIAHKDFISSPLVLNALVTSYDNPDVNAHILSWLMIIYVNC 133
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
DA+ + + M KP+L L+ + +M+ G++P+ I
Sbjct: 134 KMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMIRVGVVPNIHIY 193
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
VLI+ C DV KAE L+ K D +YN + ++++ + + +Q R R
Sbjct: 194 NVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRMER 253
Query: 584 LGFAPNNLTCKYMIHSLWK 602
G +P+ +T +I+ K
Sbjct: 254 AGVSPDIVTYNSLIYGFCK 272
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 230/497 (46%), Gaps = 73/497 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL---NCIDQCWQVYEEMGRIG 235
AYV+ G +F+ F+K + +P++++CN LLN L++ + + + + + ++G
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA- 294
I PN +TFNI+ + +C FL + + PD VTYNT++ + CKKGRL DA
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263
Query: 295 ---------------------FYLY-------------RIMYRRNVLPDLVTYTTLMNGL 320
Y Y +M + N+LPD+ TY L+NGL
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA-------------------------- 354
C EG++ EA +L M + L PD+VSYNTLI
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383
Query: 355 ---------YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
YCKEGKM ++ + + +M +G PD T ++ GY K G + A + E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ R + + + ++ LC++ + A LL + GY Y L+ K +
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V AL L DEM ++ I PS TY +I C G++ +A+S ++E+LESG+LPD
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+++GYC E DV KA + D + N + +G L K ++L ++ G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623
Query: 586 FAPNNLTCKYMIHSLWK 602
A + +T +I SL K
Sbjct: 624 KAIDTVTYNTLITSLCK 640
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 223/511 (43%), Gaps = 90/511 (17%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
YN P+ N I+D +C + GD+ L+ + LLP+ + I
Sbjct: 237 YNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNI------------- 283
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
L + YC + W +K ++EL+ DV+
Sbjct: 284 -LVY---------------GYCK----MGW-------LKEAANVIELMTQNNLLPDVWTY 316
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+ CN G I E+FK + ++ P +VS N L+NG L+ + I + +++
Sbjct: 317 NMLINGLCN-----EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
EEM G+ PN T NI+ +CK G +D + + K+EE GF PD VTYNTLI+ YCK
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + +AF M R+N+ D VT T++ LC+E K+ EA++L RG D VSY
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Query: 349 NTLIFAY-----------------------------------CKEGKMQESKSLLYEMMG 373
TLI Y C+ GK +++ S L E++
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSAL---NLVVELQRFGVSISRDIY--DYLIVALCQD 428
+G+ PD T I+ GY +EG + A N +VE S D++ + L+ LC +
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE-----NSFKPDVFTCNILLRGLCME 606
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A L G YN L+ SLCK + DA L EM ++ + P TY
Sbjct: 607 GVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTY 666
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
A+I GR EA M +MLE G LPD
Sbjct: 667 NAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 198/433 (45%), Gaps = 35/433 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P V+ N +L+ L K + + +M G+ PN +T+NIL + +CK G + +
Sbjct: 241 PDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG--- 319
+E + + PD+ TYN LI+ C +GR+ +AF L M +LPD+V+Y TL+NG
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 320 --------------------------------LCKEGKVREAHQLFHRMVHRGLSPDIVS 347
CKEGK+ +A +M G SPD V+
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTLI YCK G M E+ + EM + D+ T I++ +E +L A L+ +
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G I Y LIV +D A L + + + +PS YN ++ LC+C
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A+ +E+++ + P +TY ++ +C G +A ++M+E+ PD C +L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G CME + KA L + K + DT +YN + ++G L L
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 588 PNNLTCKYMIHSL 600
P++ T +I +L
Sbjct: 661 PDHYTYNAIITAL 673
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 197/414 (47%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y K+G ++E+ P + + N L+NGL I++ +++ +EM + +
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLL 345
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ ++N L + + + + LE++ E+G P+ VT+N ++ YCK+G+++DA
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD VTY TL+NG CK G + EA + M + + D V+ NT++ C+
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR 465
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
E K++E+ LL G + D + ++ GY K+G + AL L E++ + S
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT 525
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ +I LCQ + A S L + + G +P YN ++ C+ V A ++MV
Sbjct: 526 YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + KP + T L+ C G +A+ L + + G D+ LI C E ++
Sbjct: 586 ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLD 645
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
A LL +K D +YNA+ + G + + E + L G P+ +
Sbjct: 646 DAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQV 699
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 168/340 (49%), Gaps = 5/340 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---EGKVREA 329
P +T I +Y + G+ + AF +++ M R + P+L+T TL+N L + V +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ F+ + G+ P++ ++N +I+ YC E K +++ L M PD T I+
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K+GRL A +L+++++ G+ +R+ Y+ L+ C+ A +++E + Q+ +P
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L+ LC + +A L+DEM + + P + +Y LI + EA L++
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM E G+ P++ +++ YC E ++ A + + D +YN + N + + G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
++ + R +++T ++ +L + E+K +
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR--EKKLE 470
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 117/278 (42%), Gaps = 58/278 (20%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + + K + + + PS V+ N ++ GL + +Q E+ G+ P
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL----------------------- 275
+ T+N + H +C+ GDV+K F K+ E F PD+
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLF 616
Query: 276 ------------VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
VTYNTLI+S CK+GRL+DAF L M + + PD TY ++ L
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676
Query: 324 GKVREAHQLFHRMVHRGLSPD-----------------------IVSYNTLIFAYCKEGK 360
G++REA + +M+ +G PD V+Y+ I C EGK
Sbjct: 677 GRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGK 736
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+++ + E GI D T ++ G K + +S
Sbjct: 737 YKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSIS 774
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVF 166
AL ++ +K + EI P++ Y I+ L K A+ L EL+E L+ D +
Sbjct: 507 ALKLWDEMK-EKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
Y + G + ++F+ K ++ F+P + +CN LL GL +++ +
Sbjct: 566 H-----------GYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++ G +T T+N L CK G +D L ++EE+ PD TYN +I++
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674
Query: 287 KKGRLNDAFYLYRIMYRRNVLPD-----------------------LVTYTTLMNGLCKE 323
GR+ +A M + LPD V Y+ + LC E
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTE 734
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
GK ++A ++F +G++ D +Y L+ K K
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/588 (27%), Positives = 258/588 (43%), Gaps = 59/588 (10%)
Query: 43 SLSNP--LYNFLPETQNPNKIVDLICSSLKKG--DSHLTLLQNDLKPLLPHLGAHEISRV 98
SLS P LY+ P + D + +++ ++ L + L+ LLP H +
Sbjct: 12 SLSKPSFLYSTWHSPPPPAVLADPVLAAVSTAINNAQTKPLASSLRRLLPSFKPHHFIDL 71
Query: 99 LLR--CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
+ + S +FFNW+ + + TS +YC + + L+ + F ++ LV
Sbjct: 72 INQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSR- 130
Query: 157 KDCPHSVDVFQDLI--SCTEDCNW-------AYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
K + VF ++ + T N+ AY G + ++ + FR + FQ
Sbjct: 131 KGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHG 190
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
C +LL+ ++ N W Y E+ G P +NIL + FCK G + +I
Sbjct: 191 CGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIR 250
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+ G P V++NTLI+ CK L++ F L + M + PD+ TY+ L++GLCKEG++
Sbjct: 251 KRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLD 310
Query: 328 EAHQLF-----------------------------------HRMVHRGLSPDIVSYNTLI 352
A QLF H+M+ G+ PD+V YNTL+
Sbjct: 311 VAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLL 370
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
CK G + +++ L+ EM G+ PD T ++ GY KEG L SA+ + + GV
Sbjct: 371 NGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ + LI C+D R A L + + G P Y +++ CK +V L
Sbjct: 431 LDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKL 490
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM KP + TY L+ C G+ A L++ ML G+ PD +L+ G+C
Sbjct: 491 LKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
KAE LL +K I D Y ++ + + + L + QKR
Sbjct: 551 N---GKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS-----LKDRQKR 590
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
E+LE G P Q +LIN +C E + A+ + K+ T S+N + N +
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L + L+K P+ T +IH L K
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/497 (29%), Positives = 230/497 (46%), Gaps = 73/497 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL---NCIDQCWQVYEEMGRIG 235
AYV+ G +F+ F+K + +P++++CN LLN L++ + + + + + ++G
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA- 294
I PN +TFNI+ + +C FL + + PD VTYNT++ + CKKGRL DA
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263
Query: 295 ---------------------FYLY-------------RIMYRRNVLPDLVTYTTLMNGL 320
Y Y +M + N+LPD+ TY L+NGL
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA-------------------------- 354
C EG++ EA +L M + L PD+VSYNTLI
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383
Query: 355 ---------YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
YCKEGKM ++ + + +M +G PD T ++ GY K G + A + E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ R + + + ++ LC++ + A LL + GY Y L+ K +
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V AL L DEM ++ I PS TY +I C G++ +A+S ++E+LESG+LPD
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+++GYC E DV KA + D + N + +G L K ++L ++ G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623
Query: 586 FAPNNLTCKYMIHSLWK 602
A + +T +I SL K
Sbjct: 624 KAIDTVTYNTLITSLCK 640
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 228/540 (42%), Gaps = 80/540 (14%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
YN P+ N I+D +C + GD+ L+ + LLP+ + I
Sbjct: 237 YNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNI------------- 283
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
L + YC + W +K ++EL+ DV+
Sbjct: 284 -LVY---------------GYCK----MGW-------LKEAANVIELMTQNNLLPDVWTY 316
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+ CN G I E+FK + ++ P +VS N L+NG L+ + I + +++
Sbjct: 317 NMLINGLCN-----EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLL 371
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
EEM G+ PN T NI+ +CK G +D + + K+EE GF PD VTYNTLI+ YCK
Sbjct: 372 EEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKA 431
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + +AF M R+N+ D VT T++ LC+E K+ EA++L RG D VSY
Sbjct: 432 GNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
TLI Y K+G + + L EM I P T T
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVT-------------------------- 525
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
Y+ +I LCQ + A S L + + G +P YN ++ C+ V
Sbjct: 526 ---------YNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEK 576
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A ++MV+ + KP + T L+ C G +A+ L + + G D+ LI
Sbjct: 577 AFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLIT 636
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
C E ++ A LL +K D +YNA+ + G + + E + L G P
Sbjct: 637 SLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 198/433 (45%), Gaps = 35/433 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P V+ N +L+ L K + + +M G+ PN +T+NIL + +CK G + +
Sbjct: 241 PDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANV 300
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG--- 319
+E + + PD+ TYN LI+ C +GR+ +AF L M +LPD+V+Y TL+NG
Sbjct: 301 IELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360
Query: 320 --------------------------------LCKEGKVREAHQLFHRMVHRGLSPDIVS 347
CKEGK+ +A +M G SPD V+
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTLI YCK G M E+ + EM + D+ T I++ +E +L A L+ +
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G I Y LIV +D A L + + + +PS YN ++ LC+C
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A+ +E+++ + P +TY ++ +C G +A ++M+E+ PD C +L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G CME + KA L + K + DT +YN + ++G L L
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660
Query: 588 PNNLTCKYMIHSL 600
P++ T +I +L
Sbjct: 661 PDHYTYNAIITAL 673
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 168/340 (49%), Gaps = 5/340 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---EGKVREA 329
P +T I +Y + G+ + AF +++ M R + P+L+T TL+N L + V +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ F+ + G+ P++ ++N +I+ YC E K +++ L M PD T I+
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K+GRL A +L+++++ G+ +R+ Y+ L+ C+ A +++E + Q+ +P
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L+ LC + +A L+DEM + + P + +Y LI + EA L++
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM E G+ P++ +++ YC E ++ A + + D +YN + N + + G
Sbjct: 373 EMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAG 432
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
++ + R +++T ++ +L + E+K +
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR--EKKLE 470
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 116/278 (41%), Gaps = 58/278 (20%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + + K + + + PS V+ N ++ GL + +Q E+ G+ P
Sbjct: 497 GYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLP 556
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL----------------------- 275
+ T+N + H +C+ GDV+K F K+ E F PD+
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616
Query: 276 ------------VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
VTYNTLI+S CK+GRL+DAF L M + + PD TY ++ L
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676
Query: 324 GKVREAHQLFHRMVHRGLSPD-----------------------IVSYNTLIFAYCKEGK 360
G++REA + +M+ +G P V+Y+ I C EGK
Sbjct: 677 GRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGK 736
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+++ + E GI D T ++ G K + +S
Sbjct: 737 YKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSIS 774
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVF 166
AL ++ +K + EI P++ Y I+ L K A+ L EL+E L+ D +
Sbjct: 507 ALKLWDEMK-EKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
Y + G + ++F+ K ++ F+P + +CN LL GL +++ +
Sbjct: 566 H-----------GYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++ G +T T+N L CK G +D L ++EE+ PD TYN +I++
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674
Query: 287 KKGRLNDAFYLYRIMYRRNVLP-----------------------DLVTYTTLMNGLCKE 323
GR+ +A M + LP V Y+ + LC E
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTE 734
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
GK ++A ++F +G++ D +Y L+ K K
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 272/594 (45%), Gaps = 62/594 (10%)
Query: 46 NPLYNFLPETQNPN-KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS 104
+PL LPE ++ + + + S L K + H + LK ++ + +S L
Sbjct: 46 SPLLRNLPEEESDSMSVPHRLLSILSKPNWHKS---PSLKSMVSAISPSHVSS-LFSLDL 101
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D +AL F +W+ + K + +Y ++ +L N K+ +++
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIK---------- 151
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC-NFLLNGLLKLNCIDQ 223
SC + YV + L R+ K R L I+ C N LLN L + +D+
Sbjct: 152 ------SCDSVGDALYV-LDLCRKMNKDERFELKYKL---IIGCYNTLLNSLARFGLVDE 201
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
QVY EM +CPN +T+N + + +CK G+V++ N ++ KI E G DPD TY +LI
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 284 SYCKKGRLNDAFYLYRIMY----RRN-------------------------------VLP 308
YC++ L+ AF ++ M RRN P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ TYT L+ LC + EA L M G+ P+I +Y LI + C + K ++++ LL
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M+ G+ P+ T ++ GY K G + A+++V ++ +S + Y+ LI C+
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
N A +L ++ + +P + YN L++ C+ + A L M DR + P TY
Sbjct: 442 N-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++I C R EA L D + + G+ P+ + LI+GYC V++A +L
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + ++ ++NA+ + DG L + L+++ +++G P T +IH L K
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 208/420 (49%), Gaps = 13/420 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQ 167
A+ F +K+D E PT Y +++ L + + S A+ ++ E+ E +K H+ V
Sbjct: 307 AMDLFVKMKDD-ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D S C + + + + L+ G P++++ N L+NG K I+ V
Sbjct: 366 D--SLCSQCKFEKAR--------ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
E M + PNT T+N L +CK+ +V K G L K+ E PD+VTYN+LI C+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + A+ L +M R ++PD TYT++++ LCK +V EA LF + +G++P++V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y LI YCK GK+ E+ +L +M+ P++ T ++ G +G+L A L ++
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G+ + LI L +D A S +++ G P Y +++ C+ +
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
DA + +M + + P L TY +LI + +G++ A ++ M ++G P LI
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 1/415 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ F K D P++ + L+ L + + +EM GI PN HT+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L C +K L ++ E+G P+++TYN LI+ YCK+G + DA + +M R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P+ TY L+ G CK V +A + ++M+ R + PD+V+YN+LI C+ G +
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL M G+ PD +T ++ K R+ A +L L++ GV+ + +Y LI
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ + A +LE++ +P+ +N L+ LC + +A LL+++MV ++P++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
ST LI G A S +ML SG PD+ I YC E + AE ++
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D +Y+++ + + G + ++ KR G P+ T +I L
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 191/398 (47%), Gaps = 54/398 (13%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ K L+ P +V+ N L++G + D +++ M G+ P+ T+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ CK+ V++ + +E++G +P++V Y LI YCK G++++A + M +N
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 306 VLPDLVTYTTLMNGLCKEGKVREA-----------------------HQL---------- 332
LP+ +T+ L++GLC +GK++EA H+L
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 333 --FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
F +M+ G PD +Y T I YC+EG++ +++ ++ +M NG+ PD FT +++GY
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ-------DNRPF----------- 432
G G+ A +++ ++ G S+ + LI L + + P
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRAL 491
LLE++ + P+ + Y +L+ +C+ ++ A + D M + I PS + AL
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ C C + + EA ++D+M+ G LP + C+VLI G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 59/313 (18%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y TL+N L + G V E Q++ M+ + P+I +YN ++ YCK G ++E+ + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ PD FT ++ GY + L SA + E+ G + Y +LI LC R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR-- 303
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+ +A+ L +M D P++ TY LI
Sbjct: 304 ---------------------------------IDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
CG R EA++L+ EM E+G+ P+ VLI+ C + KA LLG +K +
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 553 YDTESYNAVFNMFAEDG------DLSKLMELQKRFLRLGFAPNNLT--------CKYMIH 598
+ +YNA+ N + + G D+ +LME +K +PN T CK +H
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNELIKGYCKSNVH 444
Query: 599 S----LWKGMERK 607
L K +ERK
Sbjct: 445 KAMGVLNKMLERK 457
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 159/392 (40%), Gaps = 38/392 (9%)
Query: 57 NPN-----KIVDLICSSLKKGDSHLTLLQNDLKPLLPH-LGAHEISRVLLRCQSDSVSAL 110
NPN ++D C + K ++HL L + K LP+ L + + L C +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL--CADGKLKEA 586
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDL 169
T + ++PT S +++H L + F A +++ K H+ F
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ- 645
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
Y + G + ++ K + G P + + + L+ G L + + V +
Sbjct: 646 ---------TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 230 EMGRIGICPNTHTF-NILTHVF-CKNG----------------DVDKVNGFLEKIEEEGF 271
M G P+ HTF +++ H+ K G + D V LEK+ E
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAH 330
P+ +Y LI C+ G L A ++ M R + P + + L++ CK K EA
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++ M+ G P + S LI K+G+ + S+ ++ G Y D +II+ G
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
GK+G + + L +++ G S Y LI
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 224/462 (48%), Gaps = 22/462 (4%)
Query: 75 HLTLLQND---LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCL 131
H L+ +D L L H ++ +LL+ Q D V +L FFN +K I T + +
Sbjct: 22 HSHLIHSDWDKLNKLSTHFTPFRVNHILLKIQKDHVLSLEFFNSLKTLNPISLTLETHSI 81
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV----FQDLISCTEDCNWA-------- 179
I+HIL +KF A +L L+ S+D+ F L+ C+ +
Sbjct: 82 ILHILTKKSKFKSAQSILRTLL-----ASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLF 136
Query: 180 --YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
Y + R + F + D GF P++ SCN L+ LL + +D Y EM R I
Sbjct: 137 KTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRIS 196
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN++TFN++ CK+G ++K L ++E G P++V+YNTLI+ +C KG L+ A L
Sbjct: 197 PNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKL 256
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+M + + P++VT+ +L++G CKEGK+ EA++ F M ++P+ V+YNTLI Y +
Sbjct: 257 KNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQ 316
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + EMM NG+ D T ++ G KEG+ A LV EL + + +
Sbjct: 317 VGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNAST 376
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C A L + + + G P+ + + L + K + A + +M
Sbjct: 377 YSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMF 436
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
R++ +T + C G+ A+ L EM ++P+
Sbjct: 437 ARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLIPE 478
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ +L K R A +F RM G P + S N + + ++ + + EM
Sbjct: 132 FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMR 191
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I P+++T +++ K G+L A+ ++ E++ G++ + Y+ LI C
Sbjct: 192 RCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLS 251
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
AT L +G++G P++ +N L+ CK + +A EM N+ P+ TY LI
Sbjct: 252 IATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLI 311
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ +G S A + +EM+ +G+ D LI G C E KA L+ K+ +
Sbjct: 312 NGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLV 371
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +Y+A+ + + + +L K +R G PN T K + + K
Sbjct: 372 PNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVK 421
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%)
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
S ++D L N+ AT + R+ G++P++E N + SL V AL
Sbjct: 128 SPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFY 187
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM I P+ T+ ++ C G+ +AV ++ EM G+ P+ LI G+C +
Sbjct: 188 REMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNK 247
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
++ A L K + ++N++ + F ++G L + + PN +T
Sbjct: 248 GLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTY 307
Query: 594 KYMIH 598
+I+
Sbjct: 308 NTLIN 312
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 248/527 (47%), Gaps = 24/527 (4%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
L+ LLP L +S L D +AL+FFNW+ K +Y +++IL
Sbjct: 59 LRKLLPSLTPSHVSS-LFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A K+ + ++K C DV + E F+ + F+
Sbjct: 118 GVAEKIR---ISMIKSCCSIEDVL------------------FVLEVFRKMNADGEFKFK 156
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ N +L L K ID+ VY E+ I PN +TFN + + +CK G+V + +
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD TY +LI +C+ +++A+ ++ IM ++ + V+YT L++GLC+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ EA +LF M P + +Y LI+A G+ E+ +L EM G P+ T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ G KE ++ A ++ E+ G+ S Y+ LI C++ A +L+ +
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+ YNEL+ LCK V A+ L ++M++R + PSL TY +LI C +
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A L+ M E+G++PD V I+ C E V +A L K + Y A+
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
+ + + G + L +R L PN+ T +I L K E+K +
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK--EKKMK 561
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 205/419 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I E+ K F + P++ + L+ L + ++ EM G PN H
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L CK +D+ L ++ E+G P +VTYN LI YCK+G ++DAF + +M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ TY L+ GLCK+ KV +A L ++M+ R LSP +++YN+LI CK +
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + LL M NG+ PD +T + + KEGR+ A L ++ GV + IY L
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A SLLER+ D +P+ YN L+E LCK + +A L +M+ +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP++ TY LI G A+ + + M+ G PD ++ Y + + + +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ ++ + D +Y + + +A G + + K + G P+ +I +L
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 224/518 (43%), Gaps = 62/518 (11%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y ++++ L+ + + A+ + E+ E K C +V + LI K
Sbjct: 297 PTVRTYTVLIYALSGSGRKVEALNLFNEMKE--KGCEPNVHTYTVLID-------GLCKE 347
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ K + + G PS+V+ N L++G K ID +++ + M PNT T+
Sbjct: 348 NKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTY 407
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L CK V K L K+ E P L+TYN+LI CK L A+ L +M
Sbjct: 408 NELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE 467
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++PD TY+ ++ LCKEG+V EA LF + +G+ + V Y LI YCK GK+
Sbjct: 468 NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDV 527
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ SLL M+ + P+++T ++++G KE ++ A +LV ++ GV + Y LI
Sbjct: 528 AYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIG 587
Query: 424 ALCQDN----------------------------RPFAATSLLE-------RIGQDGYVP 448
+ +D + + +LE ++ ++G +P
Sbjct: 588 EMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILP 647
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE----- 503
L Y L++ + A MVD KPSL LI R E
Sbjct: 648 DLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEI 707
Query: 504 -------------AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
A+ L ++M+E G D I LI G+C ++ + +A+ L+ ++
Sbjct: 708 GIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG 767
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
+ YN++ + + G ++ + L + G P
Sbjct: 768 MSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 805
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 144/589 (24%), Positives = 244/589 (41%), Gaps = 104/589 (17%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V AL FN +K +P Y +++ L NK A KML E+ E K SV +
Sbjct: 316 VEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE--KGLIPSVVTY 372
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTF--------------------------------- 193
LI Y K G+I ++F+
Sbjct: 373 NALID-------GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 194 --RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
K L+ PS+++ N L++G K+N ++ +++ M G+ P+ T+++ C
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485
Query: 252 KNGDVDKVNGFLEKIEEEGFD-----------------------------------PDLV 276
K G V++ + ++ +G P+
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYN LI CK+ ++ +A L M V P +VTYT L+ + K+G A ++F+ M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V G PD+ +Y + AY +G ++E ++ +M GI PD T +++ GY + G
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS------------------LL 438
A + + + G S I LI L +NR S L
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLF 725
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E++ + G + IY L+ C+ + + +A L M +R + PS Y +L+ C C +
Sbjct: 726 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 785
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTES 557
G EAV L+D M+E+G+LP + ++L+ G +E KA+A+ G + + YD +
Sbjct: 786 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYN-YDEVA 844
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+ + + + + + EL G PN LT +I +G+ER
Sbjct: 845 WKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLI----EGLER 889
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 212/444 (47%), Gaps = 36/444 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ K G +R+ +K F + LD G P + N L++G K +D+ ++YEEM +G+ P
Sbjct: 17 SFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEP 76
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YL 297
+ +T+N L + FCK + + + + E+GF+PD+VTY+T+IS CK G++ +A L
Sbjct: 77 SIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEML 136
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKE---------------------------------- 323
+ M R + V Y L+NGLCK+
Sbjct: 137 FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCR 196
Query: 324 -GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GKV EA Q F M RG SPD+V+YN L+ A KEGK E+ L +++ G PDT T
Sbjct: 197 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVT 256
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G ++ + A + ++ G + + Y ++ C+ + A +LE +
Sbjct: 257 YNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS 316
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G VP + YN L++ LCK + V A L MVD P + +Y ++ C +
Sbjct: 317 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 376
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L D M+E ++PD +L++G C +++A+ LL D +YN +
Sbjct: 377 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLM 436
Query: 563 NMFAEDGDLSKLMELQKRFLRLGF 586
N + G + L + GF
Sbjct: 437 NGLRKQGRHIQADRLTQAMKEKGF 460
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 215/412 (52%), Gaps = 10/412 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D I P Y +++ A + A ++ E+V + S+ + L++
Sbjct: 36 DNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSV--GLEPSIYTYNSLLN------- 86
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV-YEEMGRIGIC 237
A+ K ++E+ + F+ + GF+P +V+ + +++GL K + + ++ + +M G
Sbjct: 87 AFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCS 146
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
NT +N L + CK+ ++++ LE++ +G+ PD +TYNT++S C+ G++++A
Sbjct: 147 ANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQF 206
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M R PD+V Y L++ L KEGK EA +LF ++ +G PD V+YN+++ +
Sbjct: 207 FDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLAR 266
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ M E++ + +M+ +G P+ T I++ G+ + ++ A ++ E+ + G
Sbjct: 267 KSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVT 326
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ LC+ N A L + +G P + Y+ ++ LCK + V DA +L D M+
Sbjct: 327 YNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMI 386
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+R + P + T+ L+ C G+ EA L+D+M SG PD L+NG
Sbjct: 387 ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG 438
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 200/402 (49%), Gaps = 1/402 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ + +L K + ++++E+M GI P+ +NIL + K G VD+ N
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
E++ G +P + TYN+L++++CK+ ++ +A L++ M + PD+VTY+T+++GLCK
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 323 EGKVREA-HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
GKV EA LFH+M+ RG S + V+YN LI CK+ ++ + LL EM G PD
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I+ G + G++ A + G S Y+ L+ AL ++ + A L + +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
GY+P YN ++ L + ++ +A + +MV P+ +TY ++ C +
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A +++EM + G +PD +L++G C V+KA L D SY+ V
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + L R + P+ +T ++ L K
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 407
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 143/266 (53%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G + E+ + F G+ P +V+ N LL+ L K D+ ++++++ G P+T
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + + ++D+ +K+ G P+ TY+ ++S +C+ +++DA + M
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ +PD+VTY L++GLCK V +AH+LF MV G +PDIVSY+ ++ CK K+
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L M+ + PD T I++ G K G+L A +L+ ++ G + Y+ L
Sbjct: 376 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTL 435
Query: 422 IVALCQDNRPFAATSLLERIGQDGYV 447
+ L + R A L + + + G++
Sbjct: 436 MNGLRKQGRHIQADRLTQAMKEKGFL 461
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R P+ T+ ++ CK+GK+R+ ++LF +M+ G+SPD + YN LI Y K+G++ E
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ G+ P +T ++ + KE ++ A+ L + G Y +I
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 424 ALCQDNRPFAATSLL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ + A +L ++ + G + YN L+ LCK +++ A L +EM +
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY ++ C +G+ EA D M G PD L++ E ++A L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
K + DT +YN++ A ++ + E+ K+ + G APN T
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 161 HSVDVFQDLIS---CTEDCNWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLL 212
++ +F+D+I+ + + + +GL R E+ + F+K + G P+ + + +L
Sbjct: 237 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVL 296
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G + +D +V EEM +IG P+ T+NIL CK VDK + + + G
Sbjct: 297 SGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 356
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+V+Y+ +++ CK +++DA L+ M R ++PD+VT+ LM+GLCK GK+ EA L
Sbjct: 357 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 416
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+M G +PD V+YNTL+ K+G+ ++ L M G D F
Sbjct: 417 LDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 237/505 (46%), Gaps = 22/505 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+ AL F + PT Y I++ L +N M++ ELVE H
Sbjct: 15 GDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER----GHHP 70
Query: 164 DV--FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
DV + LI + K G + E+ + G P++V+ + L+NGL K+ I
Sbjct: 71 DVVTYNTLID-------SLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123
Query: 222 DQCWQVYEEMGR--IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF--DPDLVT 277
D+ ++ +EM R + PN T+N CK + + + + PD VT
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
++TLI CK G++++A ++ M +P+++TY L+NGLCK K+ AH + MV
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-----IYPDTFTCQIIVQGYGK 392
+G++PD+++Y+ L+ A+CK ++ E+ LL+ M G + PD T I++ G K
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G A L E+ + + LI LC+ + AA +L+ +G G P++
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + +A +EMV P TY +L+ C R+ +A+ L+ E+
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G PD+ +L++G +A +L K D+ ++ A F+ G+L+
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLA 483
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMI 597
MEL + L G P+ TC ++
Sbjct: 484 GTMELLRVVLAKGMLPDATTCSSIL 508
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 216/434 (49%), Gaps = 22/434 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++++ L + A +++ E+ S DV ++I+ + K
Sbjct: 105 PNVVTYSVLINGLCKVGRIDEARELIQEMTR------KSCDVLPNIITYNSFLD-GLCKQ 157
Query: 184 GLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ E+ + R D + P V+ + L++GL K ID+ V+++M G PN
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK +++ + +E + ++G PD++TY+ L+ ++CK R+++A L M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277
Query: 302 YRR----NVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
R NVL PD VT+ L+ G CK G +A LF MV + L PD++++ LI C
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337
Query: 357 KEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
K G+++ ++ +L ++MGN G+ P+ T +V G K GR+ A + E+ G
Sbjct: 338 KAGQVEAARDIL-DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y L+ ALC+ +R A L+ + G+ P YN L++ L K A+ + +E
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEE 456
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM---LESGMLPDSQICRVLINGYCM 532
MV + +P T+ A CF G+ RSG M+ + L GMLPD+ C +++ C
Sbjct: 457 MVGKGHQPDSFTFAA---CFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCR 513
Query: 533 EKDVNKAEALLGFF 546
++ +A++ F
Sbjct: 514 SGKLDDVKAMIKEF 527
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 212/431 (49%), Gaps = 10/431 (2%)
Query: 182 KVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + + FR + G P+IV+ N ++NGL K N + +++EE+ G P+
Sbjct: 13 RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDV 72
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L CK GD+++ + G P++VTY+ LI+ CK GR+++A L +
Sbjct: 73 VTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 132
Query: 301 MYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAYC 356
M R+ +VLP+++TY + ++GLCK+ EA +L + L SPD V+++TLI C
Sbjct: 133 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 192
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G++ E+ S+ +M+ G P+ T +V G K ++ A ++ + GV+
Sbjct: 193 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI-----YNELMESLCKCDSVADALL 471
Y L+ A C+ +R A LL + G P++ + +N L+ CK + A
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L +EMV +N++P + T+ ALI C G+ A ++D M G+ P+ L++G C
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ +A L + D+ +Y ++ ++L G+ P+ +
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432
Query: 592 TCKYMIHSLWK 602
T ++ LWK
Sbjct: 433 TYNILVDGLWK 443
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 187/404 (46%), Gaps = 45/404 (11%)
Query: 209 NFLLNGLLKLNCIDQCWQVYE-EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N +L L + + +++ EM R G+ P T+N + + CK+ D+ E++
Sbjct: 5 NIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E G PD+VTYNTLI S CK G L +A L+ M R +P++VTY+ L+NGLCK G++
Sbjct: 65 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRID 124
Query: 328 EAHQLFHRMVHRGLS--PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTC 383
EA +L M + P+I++YN+ + CK+ E+ L+ + + PDT T
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 184
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G++ A + ++D +I
Sbjct: 185 STLIDGLCKCGQIDEACS---------------VFDDMIAG------------------- 210
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
GYVP++ YN L+ LCK D + A + + MVD+ + P + TY L+ FC R E
Sbjct: 211 -GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE 269
Query: 504 AVSLMDEMLESG-----MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
A+ L+ M G ++PD +LI G C + +A AL K D ++
Sbjct: 270 ALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 329
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A+ + + G + ++ LG PN +T ++H L K
Sbjct: 330 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 373
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ F + + QP +++ L++GL K ++ + + MG +G+ PN
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L H CK+G +++ FLE++ G PD +TY +L+ + C+ R +DA L +
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD VTY L++GL K GK +A + MV +G PD ++ + G +
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+ LL ++ G+ PD TC I+ + G+L ++ E +
Sbjct: 483 AGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC-P 160
C++ V A + +L + P Y +VH L + + A + L E+V C P
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS--SGCVP 394
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S+ + L+ +A + ++ + + G+ P V+ N L++GL K
Sbjct: 395 DSI-TYGSLV-------YALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+Q V EEM G P++ TF ++G++ L + +G PD T ++
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 506
Query: 281 LISSYCKKGRLND 293
++ C+ G+L+D
Sbjct: 507 ILDWVCRSGKLDD 519
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 485 LSTYRALICCFCGIGRSGEAVSLM-DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y ++ C G + A+ + EM G+ P +ING C D+ L
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ D +YN + + + GDL + L G PN +T +I+ L K
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 224/458 (48%), Gaps = 9/458 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y ++H N+ A+ +L ++V + CP V + +I+ K+
Sbjct: 263 PNVFSYNTVLHGFCKANRVENALWLLEQMV--TRGCPPDVVSYTTVIN-------GLCKL 313
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ + K + G QP++++ L++G ++ +D ++ +M G PN T+
Sbjct: 314 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 373
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + HVFC+ D+++ + L+ + + G PD + Y+T+IS +CK G+L +A L M R
Sbjct: 374 NNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR 433
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R PD+ +TL++ LCK + A +L + +PD+V+Y+ LI A CK ++ E
Sbjct: 434 RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++S L M+ N YPD T +V G K R+ A L ++ GV Y +I
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ C+DN +A +LER+ + VP + Y+ L+ LCK +V A + EM+ P
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAP 613
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L TY LI C I + +A +++ M + PDS LING C + +A +L
Sbjct: 614 NLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVL 673
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
K + D +Y + + +L + +L K
Sbjct: 674 REMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 228/463 (49%), Gaps = 9/463 (1%)
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESF 190
+++ L K A+++ E+ E CP V + ++ + VK G + ++
Sbjct: 917 VVIKGLCSARKLDSALELFKEMEE-SGSCPPDVFTYSTIVD-------SLVKSGKVDDAC 968
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ + G P++V+ + LL+GL K +D+ + + M R G PN T+N +
Sbjct: 969 RLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 1028
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK G +D+ LE++ + G P++VTY L+ ++CK G+ DA L +M + +P+L
Sbjct: 1029 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 1088
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
TY +L++ CK+ +V A QL M+ +G P++VSYNT+I CK K+ E LL +
Sbjct: 1089 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 1148
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ N PD T I+ K R+ A L +Q G + + Y+ L+ LC+ R
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRR 1208
Query: 431 PFAATSLL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A LL E + G P + YN +++ LCK V A L +M+ + P TY
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS 1268
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+I C EA ++++ ML++G P + LI+G+C +++KA +L K
Sbjct: 1269 IVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 1328
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
D +++ + ++ G L + EL + LR G P+ +T
Sbjct: 1329 GSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 247/523 (47%), Gaps = 19/523 (3%)
Query: 84 KPLLPHLGAHE-ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
K L H G H+ I R L S + L F K P S Y +++ L+ +++
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT---CPPDSVTYNTMINGLSKSDRL 246
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+++L E+V D + +VF + K + + + + G
Sbjct: 247 DDAIRLLEEMV----DNGFAPNVFS-----YNTVLHGFCKANRVENALWLLEQMVTRGCP 297
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +VS ++NGL KL+ +D+ +V ++M + G PN T+ L FC+ GD+D
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ K+ E G+ P+ +TYN ++ +C++ + A + ++M + PD + Y+T+++G CK
Sbjct: 358 VRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCK 417
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK+REAH L +M+ RG PD+ +TLI A CK + ++ LL +G PD
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477
Query: 383 CQIIVQGYGKEGRLLSA---LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ K RL A L+++V+ + + ++ Y+ ++ LC+ R A L +
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT---YNSVVDGLCKSRRINDAFLLFD 534
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R+ G +P + Y+ ++ S CK +++ A + + M + P + TY ALI C G
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+A + EML G P+ LI+G C V +A +L K+ D+ +Y
Sbjct: 595 TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYT 654
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N L + + + G P+ +T ++ +L K
Sbjct: 655 CLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK 697
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 223/431 (51%), Gaps = 6/431 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A +++ +++ + +R L P++ + L++GL + I +++ +EM R G+
Sbjct: 853 ALLRLKRPKDALQVYRNKL--CCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQ 910
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF-DPDLVTYNTLISSYCKKGRLNDAFYL 297
N N++ C +D +++EE G PD+ TY+T++ S K G+++DA L
Sbjct: 911 NVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRL 970
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + P++VTY++L++GLCK GK+ EA L RM G SP+IV+YNT+I +CK
Sbjct: 971 VEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCK 1030
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ E+ LL EM+ G P+ T +++ + K G+ A+ LV + G +
Sbjct: 1031 LGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ C+ + A LL + Q G VP++ YN ++ LCK V + +LL ++M+
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
N P + T+ +I C R A L + + ESG P+ L++G C + +
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 538 KAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+AE LL +K D +YN V + + + + +L + L G AP+++T +
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270
Query: 597 IHSL--WKGME 605
I SL W+ M+
Sbjct: 1271 ISSLCKWRFMD 1281
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 230/494 (46%), Gaps = 10/494 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
SAL F ++ P Y IV L + K A +++ ++V K C +V +
Sbjct: 930 SALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVS--KGCSPNVVTYS 987
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L+ K G + E+ ++ G P+IV+ N +++G KL ID+ + +
Sbjct: 988 SLLH-------GLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 1040
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEM G PN T+ +L FCK G + G +E + E+G+ P+L TYN+L+ +CK
Sbjct: 1041 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 1100
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
K + A L M ++ +P++V+Y T++ GLCK KV E L +M+ PDIV+
Sbjct: 1101 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+NT+I A CK ++ + L + +G P+ T +V G K R A L+ E+
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Query: 408 RF-GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R G S Y+ +I LC+ R A L ++ DG P Y+ ++ SLCK +
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A + + M+ P TY LI FC G +A+ ++ +L G PD +
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I+ + +A LL + + DT +YN + F + ++L + + G
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400
Query: 587 APNNLTCKYMIHSL 600
P+N T ++ L
Sbjct: 1401 EPDNATYTTLVGHL 1414
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 140/568 (24%), Positives = 251/568 (44%), Gaps = 48/568 (8%)
Query: 71 KGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYC 130
+G S L+ L L + +VL R D +AL FF W + +
Sbjct: 72 QGASDEQALRVALDEYRGQLSPEIVGKVLQRL-IDPGAALVFFEWAETRDGYQHEIFCCN 130
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESF 190
++++L +++S A + +E + LIS +++ G I ++
Sbjct: 131 CLLNVLVKAHQYSQAHDLFRSRIE--GQWGGDTVTYSTLIS-------GFIRAGKILPAY 181
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ F + G + +L GL + EM + P++ T+N + +
Sbjct: 182 ELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGL 240
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
K+ +D LE++ + GF P++ +YNT++ +CK R+ +A +L M R PD+
Sbjct: 241 SKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDV 300
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG----------- 359
V+YTT++NGLCK +V EA ++ +M+ RG P++++Y TL+ +C+ G
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360
Query: 360 ------------------------KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ + +L M+ G PD I+ G+ K G+
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE-RIGQDGYVPSLEIYN 454
L A +L+ ++ R G LI ALC+ +A LL IG D P + Y+
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD-CAPDVVAYS 479
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ +LCK + +A D MV P + TY +++ C R +A L D M +
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G++PD ++I+ +C + +++ A +L + + D +Y+A+ N + G + K
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + L G APN +T +I L K
Sbjct: 600 FDVFQEMLGCGCAPNLVTYNTLIDGLCK 627
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/507 (23%), Positives = 215/507 (42%), Gaps = 87/507 (17%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++H L K A +L + C ++ + +I + K+
Sbjct: 981 PNVVTYSSLLHGLCKAGKLDEATALLQRMTR--SGCSPNIVTYNTIID-------GHCKL 1031
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E++ + +D G QP++V+ LL+ K + + E M G PN T+
Sbjct: 1032 GRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTY 1091
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +FCK +V++ L + ++G P++V+YNT+I+ CK ++++ L M
Sbjct: 1092 NSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 1151
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFH---------------RMVH---------- 338
N +PD+VT+ T+++ +CK +V A++LF+ +VH
Sbjct: 1152 NNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 1211
Query: 339 -----------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+G SPDI++YNT+I CK ++ + L +M+ +G+ PD T
Sbjct: 1212 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT----- 1266
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
Y +I +LC+ A ++LE + ++G+
Sbjct: 1267 ------------------------------YSIVISSLCKWRFMDEANNVLELMLKNGFD 1296
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P Y L++ CK ++ AL + ++ + P + T+ I GR +A L
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVFNM 564
++ ML +G++PD+ L+ G+C D + E + F Q D +Y +
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFC---DASLTEDAVDLFEVMRQCGCEPDNATYTTLVGH 1413
Query: 565 FAEDGDLSKLM-ELQKRFLRLGFAPNN 590
+ L+ E+ K + GF N+
Sbjct: 1414 LVDKKSYKDLLAEVSKSMVDTGFKLNH 1440
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 181/353 (51%), Gaps = 6/353 (1%)
Query: 252 KNGDVDKVNGFLE-KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+NGD GF + +EG++ D T N L+ + + R DA +YR + P++
Sbjct: 822 RNGDA--ALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNM 877
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
T+T L++GLC+ G + A++L M G+ +++ +N +I C K+ + L E
Sbjct: 878 FTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKE 937
Query: 371 MMGNG-IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
M +G PD FT IV K G++ A LV ++ G S + Y L+ LC+
Sbjct: 938 MEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAG 997
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ AT+LL+R+ + G P++ YN +++ CK + +A L +EMVD +P++ TY
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
L+ FC G++ +A+ L++ M+E G +P+ L++ +C + +V +A LL +K
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + SYN V + + + + L ++ L P+ +T +I ++ K
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCK 1170
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 164/344 (47%), Gaps = 9/344 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y I+H+ N A ++L +++ CP + +IS + K
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ--TGCPPDAINYSTIIS-------GFCK 417
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +RE+ + + G +P + + L++ L K ID ++ + P+
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVA 477
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++IL H CK + + +L+ + + PD+VTYN+++ CK R+NDAF L+ M
Sbjct: 478 YSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMR 537
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V+PD+VTY+ +++ CK+ + A ++ RM PD+V+Y+ LI CK G +
Sbjct: 538 AAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVD 597
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + EM+G G P+ T ++ G K ++ A ++ +++ + Y LI
Sbjct: 598 KAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLI 657
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
LC +R A +L + G +P Y L+ +L K +++
Sbjct: 658 NGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNL 701
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 116/205 (56%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N +++GL K I+ + +++ M G+ P+ T++I+ H FCK+ ++D
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKM 567
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LE+++E PD+VTY+ LI+ CK G ++ AF +++ M P+LVTY TL++GLCK
Sbjct: 568 LERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCK 627
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
KV +A ++ M + +PD ++Y LI C +++E+ +L EM G PD T
Sbjct: 628 INKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMT 687
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQ 407
+++ K L L+ E++
Sbjct: 688 YGTLLRALQKTNNLELVEQLLKEME 712
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 129/628 (20%), Positives = 238/628 (37%), Gaps = 133/628 (21%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ N +VD +C S + D+ L D + A
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLF--------------------------DRMRAAG- 540
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+ P Y +++H +N A KML + E C V + LI+
Sbjct: 541 ---------VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKE--AKCVPDVVTYSALIN- 588
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G + ++F F++ L G P++V+ N L++GL K+N ++Q ++ E M
Sbjct: 589 ------GLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMR 642
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+ P++ T+ L + C +++ L +++++G PD +TY TL+ + K L
Sbjct: 643 KQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLE 702
Query: 293 -------------------DAFYLYRIMYRRNVL--------PDLVTYTTLMNGLCKEGK 325
+ L+R + R +VL L + T +++ ++G+
Sbjct: 703 LVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQ 762
Query: 326 VR-EAHQL----------FHRMVHRGLSPDIV-------------SYNTLIFAYCKEGKM 361
HQ FH + R L+ T + +G
Sbjct: 763 FSPRPHQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVR 822
Query: 362 QESKSLLY---EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN----------------- 401
+L + G DT+TC ++Q + R AL
Sbjct: 823 NGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTI 882
Query: 402 ----------------LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
L+ E+ R GV + +++ +I LC + +A L + + + G
Sbjct: 883 LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942
Query: 446 YV-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
P + Y+ +++SL K V DA L ++MV + P++ TY +L+ C G+ EA
Sbjct: 943 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+L+ M SG P+ +I+G+C +++A LL + +Y + +
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLT 592
F + G + L + + G+ PN T
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFT 1090
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 150/409 (36%), Gaps = 75/409 (18%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ N ++D +C S + ++ LQ L P + I S+ F
Sbjct: 1227 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV-------ISSLCKWRF 1279
Query: 113 FNWVKNDLEI------KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+ N LE+ P + Y ++ A+++L L+ S +
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL--------SKGSY 1331
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
D+++ + +W K G +R++ + L G P V+ N LL G + +
Sbjct: 1332 PDVVTFSIFIDW-LSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVD 1390
Query: 227 VYEEMGRIGICPNTHTFNILT-HVFCKNGDVD--------------KVNGFLE-KIEE-- 268
++E M + G P+ T+ L H+ K D K+N L K+E
Sbjct: 1391 LFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASI 1450
Query: 269 -----------------------------EGFDP-DLVTYNTLISSYCKKGRLNDAFYLY 298
EG D ++V ++ ++ Y + AF L+
Sbjct: 1451 EVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLW 1510
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCK 357
R+M V PD VT+ +L+ C G + A F + GL P + ++ +I +
Sbjct: 1511 RVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGR 1570
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
G + E++ L M+G P T ++ Y G AL V EL
Sbjct: 1571 LGLVNEAEDL---MLGMPCKPSAATWNCLLSAYKICGDFERALR-VAEL 1615
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 248/527 (47%), Gaps = 24/527 (4%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
L+ LLP L +S L D +AL+FFNW+ K +Y +++IL
Sbjct: 59 LRKLLPSLTPSHVSS-LFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A K+ + ++K C DV + E F+ + F+
Sbjct: 118 GVAEKIR---ISMIKSCCSIEDVL------------------FVLEVFRKMNADGEFKFK 156
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ N +L L K ID+ VY E+ I PN +TFN + + +CK G+V + +
Sbjct: 157 PTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELY 216
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD TY +LI +C+ +++A+ ++ IM ++ + V+YT L++GLC+
Sbjct: 217 ASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCE 276
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ EA +LF M P + +Y LI+A G+ E+ +L EM G P+ T
Sbjct: 277 AGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHT 336
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ G KE ++ A ++ E+ G+ S Y+ LI C++ A +L+ +
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLME 396
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+ YNEL+ LCK V A+ L ++M++R + PSL TY +LI C +
Sbjct: 397 SNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLE 456
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A L+ M E+G++PD V I+ C E V +A L K + Y A+
Sbjct: 457 SAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALI 516
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
+ + + G + L +R L PN+ T +I L K E+K +
Sbjct: 517 DGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK--EKKMK 561
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 205/419 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I E+ K F + P++ + L+ L + ++ EM G PN H
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L CK +D+ L ++ E+G P +VTYN LI YCK+G ++DAF + +M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ TY L+ GLCK+ KV +A L ++M+ R LSP +++YN+LI CK +
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + LL M NG+ PD +T + + KEGR+ A L ++ GV + IY L
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A SLLER+ D +P+ YN L+E LCK + +A L +M+ +
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGV 575
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP++ TY LI G A+ + + M+ G PD ++ Y + + + +
Sbjct: 576 KPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDD 635
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ ++ + D +Y + + +A G + + K + G P+ +I +L
Sbjct: 636 VIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNL 694
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 218/535 (40%), Gaps = 109/535 (20%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V AL FN +K +P Y +++ L NK A KML E+ E K SV +
Sbjct: 316 VEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE--KGLIPSVVTY 372
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTF--------------------------------- 193
LI Y K G+I ++F+
Sbjct: 373 NALID-------GYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 194 --RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
K L+ PS+++ N L++G K+N ++ +++ M G+ P+ T+++ C
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485
Query: 252 KNGDVDKVNGFLEKIEEEGFD-----------------------------------PDLV 276
K G V++ + ++ +G P+
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYN LI CK+ ++ +A L M V P +VTYT L+ + K+G A ++F+ M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V G PD+ +Y + AY +G ++E ++ +M GI PD T +++ GY + G
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS-------------------- 436
A + + + G S I LI L +NR S
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWK 725
Query: 437 ---------LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
L E++ + G + IY L+ C+ + + +A L M +R + PS
Sbjct: 726 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
Y +L+ C C +G EAV L+D M+E+G+LP + ++L+ G +E KA+A+
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV 840
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 169/397 (42%), Gaps = 29/397 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F G + + V L++G K+ ID + + E M PN++
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L CK + + + + K+ G P +VTY LI K G + A ++ M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TYT ++ +G + E + +M G+ PD+V+Y LI Y + G
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS----------------------- 398
+ L M+ G P + I+++ E R+
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWK 725
Query: 399 ------ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
AL L ++ G +I IY LI CQ R A L+ + + G PS +I
Sbjct: 726 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L++ CK A+A+ L D MV+ + P L +Y+ L+C G + +A ++ +L
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 845
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
G D +VLI+G V++ L+ +K
Sbjct: 846 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 34/295 (11%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL------------------------VK 157
+KPT Y +++ + + F A+K+ +V L V
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 158 DCPHSVD---VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
D ++ + DL++ T + Y ++GL +F + +D G +PS+ + L+
Sbjct: 635 DVIAKMNEEGILPDLVTYTVLID-GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L N ++ E IGI ++ ++ K + + EK+ E G D
Sbjct: 694 LSHEN------RMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTID 747
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+ Y LI+ +C++ RL +A L M R + P Y +L++ CK G EA +L
Sbjct: 748 VSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVD 807
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
MV GL P + SY L+ EG +++K++ + ++ G D ++++ G
Sbjct: 808 AMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 862
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 264/546 (48%), Gaps = 27/546 (4%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
I DLI K+ S L + D+ P +E+ R L+ + D L +++W+ +
Sbjct: 46 IADLI---EKQHWSKLGVHVTDINP-------NELFRQLISSELDPDLCLRYYSWLVKNS 95
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV-DVFQDLISCTEDCN-- 177
+I + ++H LA ++S L V D H V +F + C C
Sbjct: 96 DISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSD--HQVHSIFHAISMCDNVCVNS 153
Query: 178 -------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
AY F+ F+++ G++ S +SC L+ LLK N VY+E
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK--- 287
M R I PN TFN++ + CK G ++K +E ++ G P++V+YNTLI YCK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ A + + M +V P+L T+ L++G K+ + + ++F M+ + + P+++S
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+LI C GK+ E+ S+ +M+ G+ P+ T ++ G+ K L AL++ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + +Y+ LI A C+ + +L E + ++G VP + YN L+ LC+ ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A L D++ + + P L T+ L+ +C G S +A L+ EM + G+ P +++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
GYC E ++ A + K+ ++ + SYN + +++ G L L L G
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 587 APNNLT 592
PN +T
Sbjct: 573 VPNRIT 578
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 31/356 (8%)
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
L N K A +L E+VE D ++ F LI D W K + S K F++
Sbjct: 271 LGGNGKMYKADAVLKEMVE--NDVSPNLTTFNILI----DGFW---KDDNLPGSMKVFKE 321
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
LD +P+++S N L+NGL I + + ++M G+ PN T+N L + FCKN
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
+ + ++ +G P YN LI +YCK G+++D F L M R ++PD+ TY
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L+ GLC+ G + A +LF ++ +GL PD+V+++ L+ YC++G+ +++ LL EM G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ---RFGVSISRDIYDYLIVALCQDNRPF 432
+ P T I+++GY KEG L +A N+ +++ R ++++ Y+ L+ Q +
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS--YNVLLQGYSQKGKLE 558
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A LL + + G VP+ Y ++K+EMVD+ P + +
Sbjct: 559 DANMLLNEMLEKGLVPNRITYE----------------IVKEEMVDQGFVPDIEGH 598
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 140/273 (51%), Gaps = 3/273 (1%)
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ F R + G +S L+ A KE + + + + EM+ I P+ FT +++
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ---DNRPFAATSLLERIGQDGYV 447
K G++ A +++ +++ +G S + Y+ LI C+ + + + A ++L+ + ++
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P+L +N L++ K D++ ++ + EM+D+++KP++ +Y +LI C G+ EA+S+
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D+M+ +G+ P+ LING+C + +A + G + + T YN + + + +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + L++ R G P+ T +I L
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 46/266 (17%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D ++KP +Y +++ L K S A+ M ++V S V +LI+ N
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV--------SAGVQPNLITYNALIN- 374
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K +++E+ F G P+ N L++ KL ID + + EEM R GI P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L C+NG+++ +++ +G PDLVT++ L+ YC+KG A L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEG---------------------------------- 324
+ M + + P +TY +M G CKEG
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 325 --KVREAHQLFHRMVHRGLSPDIVSY 348
K+ +A+ L + M+ +GL P+ ++Y
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 124/276 (44%), Gaps = 7/276 (2%)
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM-MGNGIYPDTFTCQIIVQG 389
+L H + + I S+ + + + G + S+ + + M + + ++ ++V
Sbjct: 106 KLLHSLANAKRYSKIRSF---LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLA 162
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y R +G +S L++AL ++NR + + + + P+
Sbjct: 163 YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE---AVS 506
+ +N ++ +LCK + A + ++M P++ +Y LI +C +G +G+ A +
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADA 282
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ EM+E+ + P+ +LI+G+ + ++ + + + + SYN++ N
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G +S+ + ++ + + G PN +T +I+ K
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 211/426 (49%), Gaps = 5/426 (1%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K G I ++ + + L G I + N ++GL + + I V++ M + G PN
Sbjct: 27 LKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNR 85
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L C G + E++ + G+ PD+VTYNTL+ +CK G+L++A ++
Sbjct: 86 ITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDG 145
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+R +PD+VTY L+NG CK K+ EA ++ RMV L PD+V+YN+L+ CK G+
Sbjct: 146 AVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGR 205
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE-GRLLSALNLVVELQRFGVSISRDIYD 419
+ E++ L+ + G P+ T ++ G +E RL SA L+ ++ G Y+
Sbjct: 206 VDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYN 262
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI L ++ A L + + GY P + YN L++ L K D V +A L +V
Sbjct: 263 ALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH 322
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P TY I C GR +A+ ++ +M E G +PD +ING C EK V++A
Sbjct: 323 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 382
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
E LL K + S+N + G K M K L+ G P +T ++
Sbjct: 383 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 442
Query: 600 LWKGME 605
L K +
Sbjct: 443 LCKARQ 448
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 217/428 (50%), Gaps = 7/428 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + E+ K F + GF P +V+ N L+NG K + +D+ ++ + M + P
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK-GRLNDAFYL 297
+ T+N L + CKNG VD+ I ++GF P+++TY+TLIS C++ RL A L
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQL 245
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD+V+Y L++GL +E V EA +LF ++ +G P++ +YN LI K
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
E ++ E+ L ++ +G+ PD T + + G K GR+ AL ++ ++ G
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ +I LC++ R A LL + G P+ +N L+ C+ A+ EM+
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425
Query: 478 DRNIKPSLSTYRALICCFCGI---GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
R +KP++ TY L+ C GR EA++L D M+E G +PD LI+G
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ A LLG K I + +YN++ + + + +EL + G P+ +T
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545
Query: 595 YMIHSLWK 602
+I +L K
Sbjct: 546 TIISALCK 553
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 213/421 (50%), Gaps = 7/421 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + + + G+ P +V+ N LL+G K+ +D+ ++++ + G P+ T+
Sbjct: 99 GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTY 158
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FCK +D+ L+++ E PD+VTYN+L++ CK GR+++A L +
Sbjct: 159 NALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVD 215
Query: 304 RNVLPDLVTYTTLMNGLCKE-GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P+++TY+TL++GLC+E ++ A QL +MV G PDIVSYN LI +E +
Sbjct: 216 KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVS 275
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L ++ G P+ T I++ G KE R+ A L L + G+ Y I
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R A +L+ + + G VP + +N ++ LCK V +A +L M +
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC---MEKDVNKA 539
P+ ++ LIC C G+ +A++ EML+ G+ P +L++G C E + +A
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L +K ++ D +Y+A+ + + G L L G PN T +I
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515
Query: 600 L 600
L
Sbjct: 516 L 516
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 187/369 (50%), Gaps = 9/369 (2%)
Query: 184 GLIRE--SFKTFRKTLDV----GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
GL RE ++ R+ L+ G +P IVS N L++GL + + + +++ + R G
Sbjct: 231 GLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE 290
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T+NIL K V++ + + G +PD +TY I CK GR+ DA +
Sbjct: 291 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 350
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M + +PD+V++ ++NGLCKE +V EA L M +G SP+ +S+NTLI C+
Sbjct: 351 LKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCR 410
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK---EGRLLSALNLVVELQRFGVSIS 414
GK +++ + EM+ G+ P T I+V G K EGR+ A+ L + G
Sbjct: 411 AGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 470
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI L + + A LL + G +P++ YN L+ LC D V +AL L
Sbjct: 471 VVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFV 530
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
MV++ P TY +I C +A++L D LE+G++P S + LI+G C
Sbjct: 531 AMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVA 590
Query: 535 DVNKAEALL 543
V++A LL
Sbjct: 591 RVDEALKLL 599
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 188/350 (53%), Gaps = 4/350 (1%)
Query: 197 LDVGFQPSIVSCNFLLNGLLK-LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
+D GF P++++ + L++GL + L ++ Q+ E+M G P+ ++N L H +
Sbjct: 214 VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG 273
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
V + + +G++P++ TYN LI K+ R+N+AF L+ + + + PD +TYT
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
++GLCK G+V +A + M +G PD+VS+N +I CKE ++ E++ LL M G
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC---QDNRPF 432
P+ + ++ G + G+ A+ E+ + GV + Y+ L+ LC Q+ R
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A +L + + + G VP + Y+ L++ L K + DA L M + P++ TY +LI
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 513
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
CG+ + EA+ L M+E G +PD+ +I+ C ++ V+KA AL
Sbjct: 514 SGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALAL 563
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 171/353 (48%), Gaps = 12/353 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP +Y ++H LA S A+K+ + L + V + LI +K
Sbjct: 255 KPDIVSYNALIHGLAREQGVSEALKLFGSV--LRQGYEPEVPTYNILID-------GLLK 305
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ E+F+ F + G +P ++ ++GL K ++ + ++M G P+ +
Sbjct: 306 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N + + CK VD+ L +E +G P+ +++NTLI C+ G+ A ++ M
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425
Query: 303 RRNVLPDLVTYTTLMNGLCK---EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+R V P +VTY L++GLCK EG+++EA LF M+ +G PD+V+Y+ LI K G
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAG 485
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ +++ LL M G P+ +T ++ G ++ AL L V + G Y
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+I ALC+ A +L + + G VP+ +Y L++ LC V +AL L
Sbjct: 546 TIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 181/399 (45%), Gaps = 24/399 (6%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQ----NDLKPLLPHLGA--HEISRVLLRCQ 103
F P + ++ +C L++ +S LL+ N KP + A H ++R +
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAR-----E 271
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
AL F V +P Y +++ L ++ + A ++ LV+ H +
Sbjct: 272 QGVSEALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK------HGL 324
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ D I+ T + K G + ++ + + G P +VS N ++NGL K +D+
Sbjct: 325 E--PDAITYTVFID-GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 381
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+ M G PN +FN L C+ G K +++ + G P +VTYN L+
Sbjct: 382 AEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441
Query: 284 SYCK---KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
CK +GR+ +A L+ M + +PD+VTY+ L++GL K GK+ +A +L M +G
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
P++ +YN+LI C K+ E+ L M+ G PDT T I+ K+ + AL
Sbjct: 502 CIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKAL 561
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
L GV + +Y LI LC R A LL+
Sbjct: 562 ALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 5/296 (1%)
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD T L+ L K GK+ +AH+ +++ +GL DI ++N I C+ ++ +++++
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M +G +P+ T ++ G GR+ A L + + G S Y+ L+ C+
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A + + + G+VP + YN L+ CK D + +A + MV ++ P + T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME-KDVNKAEALLGFF 546
Y +L+ C GR EA L +++ G P+ LI+G C E + + A LL
Sbjct: 193 YNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D SYNA+ + A + +S+ ++L LR G+ P T +I L K
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 165/607 (27%), Positives = 276/607 (45%), Gaps = 97/607 (15%)
Query: 69 LKKGDSHLTLLQND-LKPLLPHLGAHEISRVLLRCQ-SDSVSALTFFNWVKNDLEIKPTS 126
LK+ D + L D ++ L P + + VL + + DSV FF+W + +
Sbjct: 65 LKRKDWQILLNNEDNVRKLNPEI----VCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYL 120
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV--- 183
+Y ++ L + A ML +L++ K +++ L+ C + + + V
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTRKP---PLEILDSLVRCYREFGGSNLTVFDI 177
Query: 184 --------GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
G + E+ F ++ GF P+++ CN L+ LLK N + W+VY M
Sbjct: 178 FIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAK 237
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
I P+ +T+ + CK GDV K L ++E+E P+L TYN I C+ G +++A
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEAL 296
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLC---------------------------------- 321
+ ++M + + PD TYT L++G C
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 322 -KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
KEG + EA ++ M+ RGL ++V+YN +I K G+M ++ SL EM+ GI PDT
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQ--------------------------------- 407
+T +++ GY K + A L+ E++
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 408 --RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
R GV + +Y LI A Q++R A LL+ + +G +P L YN L+ LC+
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V +A +L +M ++ IKP+ TY A I + G A +ML SG++P++ I +
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 526 LINGYCMEKDV-NKAEALLGF--FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI G+C DV N EAL F +K I D +Y+A+ + +++G + M + +FL
Sbjct: 597 LIKGHC---DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 583 RLGFAPN 589
+ G P+
Sbjct: 654 KTGVVPD 660
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 213/462 (46%), Gaps = 38/462 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G I E+ + + + G + ++V+ N ++ G+ K + + ++ EM GI P
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEP 414
Query: 239 NTHTFNILTHVF-----------------------------------CKNGDVDKVNGFL 263
+T T+N+L + C + D+ K N L
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ G P++ Y TLI +Y ++ R A L +IM VLPDL Y L+ GLC+
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
KV EA L M +G+ P+ +Y I Y K G++Q ++ +M+ +GI P+
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+++G+ G + AL+ + G+ Y +I +L ++ + A + + +
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI--CCFCGIGRS 501
G VP + +YN L+ CK + A L DEM+ I P++ Y LI +C G
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNL 714
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EA L DEM+ G+ PD I +LI+G E ++ KA +L A++ + ++N++
Sbjct: 715 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF-HEAQQKSVGSLSAFNSL 773
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ F + G + + EL + PN +T +I + K
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 815
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 220/486 (45%), Gaps = 73/486 (15%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+ + + + + G P + N L+ GL + +++ + +MG GI P
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554
Query: 239 NTHTFNILTHVFCKNGDVD-----------------------------KVNGFLEKIE-- 267
N HT+ +++ K+G++ V +E +
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614
Query: 268 ----EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
E+G PD+ Y+ +I S K G+ +A ++ + V+PD+ Y +L++G CKE
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLI--FAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
G + +A QL+ M+H G++P+IV YNTLI + YCK G + E+ L EM+ GI PD +
Sbjct: 675 GDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGY 734
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I++ G GKEG L AL+L E Q+ V S ++ LI + C+ + A L + +
Sbjct: 735 IYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDM 793
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL---------- 491
P++ Y L+++ K + + +A L +M RNI P+ TY +L
Sbjct: 794 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 853
Query: 492 --------------ICC-----------FCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
I C +C G+S EA+ L+++ L G+ + + L
Sbjct: 854 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDAL 913
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I C EK ++ LL K+ +++ N + F + G+ + ++ RLG+
Sbjct: 914 IFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGW 973
Query: 587 APNNLT 592
P +L+
Sbjct: 974 VPTSLS 979
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 205/429 (47%), Gaps = 12/429 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP + Y +++ + + + A + +++ P++V ++ LI +
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS-SGIVPNNV-IYTILIK-------GHC 602
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
VG E+ TF+ L+ G P I + + +++ L K + V+ + + G+ P+
Sbjct: 603 DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS--SYCKKGRLNDAFYLYR 299
+N L FCK GD++K + +++ G +P++V YNTLI+ YCK G L +AF L+
Sbjct: 663 LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFD 722
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD Y L++G KEG + +A LFH + + + ++N+LI ++CK G
Sbjct: 723 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHG 781
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ E++ L +M+ + P+ T I++ YGK + A L ++++ + + Y
Sbjct: 782 KVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYT 841
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+++ Q F SL + + G Y + + CK +AL L ++ +
Sbjct: 842 SLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVE 901
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
IK + ALI C + + L+ EM + + S+ C L+ G+ + ++A
Sbjct: 902 GIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 961
Query: 540 EALLGFFAK 548
+LG +
Sbjct: 962 SKVLGVMQR 970
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 206/430 (47%), Gaps = 16/430 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY-- 180
K + +YC++ HIL + A +L E+V DC DVF L S C +
Sbjct: 7 KHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADC----DVFDVLWSTRNVCVPGFGV 62
Query: 181 --------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
+ +G++ E+ + F K P SCN LL+ KL D + +++M
Sbjct: 63 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G P T+NI+ CK GDV+ G E+++ G PD VTYN++I + K GRL+
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
D + M PD++TY L+N CK GK+ + + M GL P++VSY+TL+
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 242
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
A+CKEG MQ++ +M G+ P+ +T ++ K G L A L E+ + GV
Sbjct: 243 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 302
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI LC R A L ++ G +P+L YN L+ K ++ AL L
Sbjct: 303 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 362
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+E+ R IKP L Y I C + + A +M+EM E G+ +S I L++ Y
Sbjct: 363 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF- 421
Query: 533 EKDVNKAEAL 542
K N E L
Sbjct: 422 -KSGNPTEGL 430
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 232/491 (47%), Gaps = 50/491 (10%)
Query: 154 ELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
E +KD C V + LI+C C + + +GL + +R+ G +P++VS + L
Sbjct: 189 EEMKDMCCEPDVITYNALINCF--CKFGKLPIGL-----EFYREMKGNGLKPNVVSYSTL 241
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++ K + Q + Y +M R+G+ PN +T+ L CK G++ ++ + G
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+ ++VTY LI C R+ +A L+ M V+P+L +Y L++G K + A +
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L + + RG+ PD++ Y T I+ C K++ +K ++ EM GI ++ ++ Y
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421
Query: 392 KEGRLLSALNLVVELQR------------------------------------FGVSISR 415
K G L+L+ E++ FG+ +
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
I+ +I LC+DN+ AAT+L E++ Q G VP Y LM+ K +V +AL L+D+
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 541
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + +K L Y +L+ + +A S ++EM+ G+ PD +C ++ +
Sbjct: 542 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 601
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG-FAPNNLTCK 594
+++A L + K Q+ +++ NA+ N+++ D +L E +++ R+ P L
Sbjct: 602 IDEAVELQSYLMKH-QLLTSDNDNALPNIYS-DQNLVSSREHEEQETRISNLQPKLLLGI 659
Query: 595 Y--MIHSLWKG 603
Y IH L +G
Sbjct: 660 YKLAIHRLIRG 670
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 243/502 (48%), Gaps = 21/502 (4%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
CQ++++ + + P + Y +++ L N+ K+L E+VE ++ P
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGRE-PD 231
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + +++C + G E+ K K ++ P +V+ N L++G K++ +
Sbjct: 232 TFS-YNTVVAC-------LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKM 283
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D+ ++ E+M P T+ L F + + +E + + G PDLVTYN L
Sbjct: 284 DEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCL 343
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ CK G+L +A L +M ++ PD+VTY+ L+NGLCK GKV +A L M+ RG
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++V++NT+I +CK GK+ E +L M PD T ++ GY K R+ A
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ G+S + Y ++ LC + A +++ + + G P+ Y ++ LC
Sbjct: 464 I------LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLC 517
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +AL + M +R +P+L TY LI C R +A++++D MLE G +PD
Sbjct: 518 DVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVA 577
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVFNMFAEDGDLSKLMELQ 578
LI+G+C +NK +A F D +YN + + F + G++ K +E+
Sbjct: 578 TYTSLIDGFC---KINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
+ L G P+ T ++ SL
Sbjct: 635 QLMLEKGCNPDAATYFSLMRSL 656
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/530 (26%), Positives = 248/530 (46%), Gaps = 40/530 (7%)
Query: 102 CQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
CQ D AL+ F + + PT+ YC+++H L + A ++L E+++ KDC
Sbjct: 70 CQIGDLDRALSHF---RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ--KDCH 124
Query: 161 HSVDVFQDLI----------------------SCTEDC-NWAYVKVG-----LIRESFKT 192
V+ LI SC D + + VG + E+ K
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
K + G P V+ N LLNGL K N +++ ++ EEM G P+T ++N + C+
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G ++ LEK+ E+ PD+VTYN+L+ +CK ++++A L M R P ++T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YTTL+ G + ++ +A+++ M G+SPD+V+YN L+ CK GK++E+ LL M+
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
PD T I+V G K G++ A L+ + G + ++ +I C+ +
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+LE + + P + Y+ L++ CK + + DA + I P ++Y +++
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKASYSSML 478
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G+ EA +MD M + G P S ++I G C + ++A +L +++
Sbjct: 479 EGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCE 538
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +Y+ + N + + + + L G P+ T +I K
Sbjct: 539 PNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCK 588
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 194/417 (46%), Gaps = 4/417 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E + FR+ +PS + L+ G + ++ EM P+ T N +
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 248 HVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+C+ GD+D+ ++ F K+ P TY LI C+ R+++A+ L M +++
Sbjct: 67 KAYCQIGDLDRALSHFRGKM---WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD Y L+ GLCK GK+ A + M+ R PD+++Y +LI C+ + E++
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L+ +M +G+ PDT ++ G K+ +L L+ E+ G Y+ ++ LC
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A +LE++ + P + YN LM+ CK + +A L ++MV R P++
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVI 303
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LI F R +A +M++M ++G+ PD L++G C + +A LL
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+K D +Y+ + N + G + L + L G PN +T MI K
Sbjct: 364 VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 33/349 (9%)
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
K R + + +R + P TY L+ G + G + ++ + M+ R SPD+++
Sbjct: 2 KVRPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVIT 61
Query: 348 YNTLIFAYCKEG---------------------------------KMQESKSLLYEMMGN 374
+NT++ AYC+ G ++ E+ LL EM+
Sbjct: 62 HNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
+PD ++ G K G++ +A N++ + Y LIV CQ N A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L+E++ + G P YN L+ LCK + + + L +EMV+ +P +Y ++ C
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G+ EA ++++M+E PD L++G+C +++AE LL +
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+Y + F+ L+ + + + G +P+ +T ++ L K
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKA 350
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 9/204 (4%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L I P ++Y ++ L K A +++ + + + CP + + +I D
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK--QGCPPTSSHYALIIGGLCD---- 518
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
V+ G E+ K + + G +P++ + + L+NGL K ++ V + M G P+
Sbjct: 519 -VERG--DEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPD 575
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L FCK +D + + + G +PD + YN LIS +C+ G + A + +
Sbjct: 576 VATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKE 323
+M + PD TY +LM L E
Sbjct: 636 LMLEKGCNPDAATYFSLMRSLTTE 659
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 240/543 (44%), Gaps = 52/543 (9%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + L+ +C+ HIL + A +L EL + S VF
Sbjct: 53 ALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKELSLM---SGKSSFVF 109
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L++ CN Y++ G+I++S + FR GF PS+ +CN +L ++
Sbjct: 110 GALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIV 169
Query: 217 KLNCID-QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K +C D W +EM + ICP+ TFNIL +V C G K + ++K+E+ G+ P +
Sbjct: 170 K-SCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTI 228
Query: 276 VTYNTLISSYCKKGRLNDA-----------------------------------FYLYRI 300
VTYNT++ YCKKGR A + L R
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +R + P+ VTY TL+NG EGKV A QL + M+ GLSP+ V++N LI + EG
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+E+ + + M G+ + +++ G K A + ++R GV + R Y
Sbjct: 349 FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC++ A +L + +DG P + Y+ L+ C+ + A + +
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P+ Y LI C +G E + + + M+ G PD VL+ C V +AE
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + S++ + N + G+ K + ++G P T ++ L
Sbjct: 529 EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 601 WKG 603
KG
Sbjct: 589 CKG 591
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 226/512 (44%), Gaps = 45/512 (8%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +++ + K A ++L E++ H F LI ++
Sbjct: 294 IHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT--FNALID-------GHI 344
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G +E+ K F G + VS LL+GL K D Y M R G+C
Sbjct: 345 SEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + CKNG +D+ L ++ ++G DPD+VTY+ LI+ +C+ GRL A + +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRI 464
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
YR + P+ + Y+TL+ C+ G ++E +++ M+ G +PD ++N L+ + CK GK+
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKV 524
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ + M +GI P+ + ++ GYG G L A ++ E+ + G + Y L
Sbjct: 525 AEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ AA L+ + + N L+ ++CK ++ A+ L EMV R+I
Sbjct: 585 LKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSI 644
Query: 482 KPSLSTYRALICCFCGIGRSGEAV--------------------SLMDEMLES------- 514
P TY +LI C G++ A+ +D M ++
Sbjct: 645 LPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGF 704
Query: 515 ---------GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
G+ D +I+GY + K LL + Q + +YN + + +
Sbjct: 705 YFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGY 764
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
++ +S L + + G P+ LTC +I
Sbjct: 765 SKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 197/432 (45%), Gaps = 3/432 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ +VG ++ + + + VG P+ + + L+ ++ C+ + ++YE M G P
Sbjct: 447 GFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTP 506
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN+L CK G V + F+ + +G P+ V+++ LI+ Y G AF ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P TY +L+ GLCK G + A + + + + D V NTLI A CK
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKS 626
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI- 417
G + ++ SL EM+ I PD+FT ++ G ++G+ + A+ E + G + +
Sbjct: 627 GNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVM 686
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + + + + A +++ + G + N +++ + + L EM
Sbjct: 687 YTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMG 746
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++N P+L+TY L+ + + L M+ SG+LPD C +I G C +
Sbjct: 747 NQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLE 806
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L F + D ++N + + +G+++ ++ LG + + TC ++
Sbjct: 807 IGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIV 866
Query: 598 HSLWKGMERKFQ 609
L + +FQ
Sbjct: 867 SVLNR--NHRFQ 876
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 193/455 (42%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + K + +V V CN L+ + K +D+ ++ EM + I P++
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649
Query: 242 TFNILTHVFCKNGDV------------------DKV------NG------------FLEK 265
T+ L C+ G +KV +G F ++
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQ 709
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+++ G D+VT N +I Y + G++ L M +N P+L TY L++G K
Sbjct: 710 MDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKH 769
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V + L+ M+ G+ PD ++ ++I C+ ++ +L + G+ D T +
Sbjct: 770 VSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNM 829
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + A ++V + G+S+ ++ D ++ L +++R + +L + + G
Sbjct: 830 LISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y L+ LC+ + A ++K+EM+ I P A++ G++ EA
Sbjct: 890 ISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAS 949
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ ML+ ++P L++ +C +V +A L + D SYN +
Sbjct: 950 LLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
GD++ EL + R GF N T K ++ +
Sbjct: 1010 CAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGI 1044
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 173/385 (44%), Gaps = 1/385 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ V ++G+ K + ++M ++G+ + T N + + + G ++K +
Sbjct: 682 PNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDL 741
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ + P+L TYN L+ Y K+ ++ +F LYR M +LPD +T +++ G+C+
Sbjct: 742 LFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICE 801
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ ++ + RG+ D ++N LI C G++ + ++ M GI D T
Sbjct: 802 SNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNT 861
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C IV + R + ++ E+ + G+S Y L+ LC+ A + E +
Sbjct: 862 CDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMI 921
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
P + ++ +L KC +A LL M+ + P+++++ L+ FC G
Sbjct: 922 AHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVT 981
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA-V 561
EA+ L M G+ D VLI G C + D+ A L + + + +Y A V
Sbjct: 982 EALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALV 1041
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGF 586
+ ++ + S + K L GF
Sbjct: 1042 GGILSQGTEFSGTDIILKDLLARGF 1066
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 120/257 (46%), Gaps = 13/257 (5%)
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
+C VE+ + H+ ++ + NWA+ V ++ +G +C
Sbjct: 816 ICRGVEVDR---HTFNMLISKCCANGEINWAFDMVNVMTS----------LGISLDKNTC 862
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ +++ L + + + V EM + GI P + + L + C+ GD+ E++
Sbjct: 863 DAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIA 922
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
P V + ++ + K G+ ++A L R M + ++P + ++TTLM+ CK G V E
Sbjct: 923 HKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTE 982
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +L M + GL D+VSYN LI C +G M + L EM +G + T + +V
Sbjct: 983 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVG 1042
Query: 389 GYGKEGRLLSALNLVVE 405
G +G S +++++
Sbjct: 1043 GILSQGTEFSGTDIILK 1059
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 238/508 (46%), Gaps = 47/508 (9%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
+ +FF W + K + + ++ IL + F A ++L +L + ++ S V +
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQ--RELLSSPLVLRS 120
Query: 169 LIS-CTED-------CNWA---YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
L+ +ED +W Y K G+I +S F + G +P + +C LLN L+K
Sbjct: 121 LVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK 180
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
D W+++++M ++G+ N H +N+L H K+GD +K L ++EE+G PD+ T
Sbjct: 181 QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFT 240
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR-- 335
YNTLIS YCKK +A + M R V P++VTY + ++G +EG++REA +LF
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
Query: 336 --------------------------------MVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
M RG SP +V+YN+++ C++G+++E
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL EM G I PD TC ++ Y K ++SA+ + ++ G+ + Y LI
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ A L + + G+ P Y+ L++ + + L +E R +
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ YR LI C + + A L + M + G++ DS I + Y V +A AL
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ + + + Y ++ +A D D+
Sbjct: 541 DVMYNRRLMVNLKLYKSISASYAGDNDV 568
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/422 (29%), Positives = 208/422 (49%), Gaps = 15/422 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + + I+ +A AM L + C +V + LI+ A+ +
Sbjct: 145 PDAFTHTPIITAMANAGDLDGAMDHLRSM-----GCDPNVVTYTALIA-------AFARA 192
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ K + + G P++V+ N L++ L KL+ + V ++M G PN TF
Sbjct: 193 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 252
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L FCK G+VD L + +G P++VTY+ LI CK + +A + M
Sbjct: 253 NSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT 312
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R V PD TY+ L++GLCK K+ EA Q+ RM G +PD+V Y+++I A+CK GK+ E
Sbjct: 313 RGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 372
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYL 421
++ L EM PD T ++ G K G++ A ++ ++Q G + D+ Y +
Sbjct: 373 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG-DVLPDVVTYSTV 431
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A LL+R+ + G P + Y +++ LCKC + +A L M
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY LI C + EA +M+EM +G P+ ++NG C+ + +A+
Sbjct: 492 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 551
Query: 542 LL 543
L+
Sbjct: 552 LV 553
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 245/507 (48%), Gaps = 17/507 (3%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
+VL+RC+ + F + + E P +Y +++ A+ EL+E +
Sbjct: 85 QVLVRCKKHREAGDLFRSELLASCE--PDVCSYNIVISGFCNAGDLHAAL----ELLEEM 138
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K + D F T A G + + R +G P++V+ L+
Sbjct: 139 KSAGFAPDAFTHTPIIT-----AMANAGDLDGAMDHLR---SMGCDPNVVTYTALIAAFA 190
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ +++ ++ EEM G PN T+N+L CK V ++K+ E GF P+++
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T+N+L+ +CK+G ++DA L IM + + P++VTY+ L++GLCK K EA ++ M
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
RG++PD +Y+ LI CK K++E++ +L M G+G PD I+ + K G+L
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNE 455
L A + E+++ S Y+ +I LC+ + A +LE++ + G V P + Y+
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++ LCK D + +A L D M P + TY +I C GR EA L+ M +G
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
P+ LI+G C + V++AE ++ + +YN + N G + +
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550
Query: 576 ELQKRFL--RLGFAPNNLTCKYMIHSL 600
+L +R R +P+ T + ++++L
Sbjct: 551 QLVQRMKDGRAECSPDAATYRTIVNAL 577
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 235/522 (45%), Gaps = 50/522 (9%)
Query: 86 LLPHLGAHEISRVLLRCQS---DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
L P GA R++ R + D+ AL FF W + P S+ +WN+
Sbjct: 33 LSPFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASI---PGFSHTAF-----SWNS-- 82
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
+ Q L+ C + RE+ FR L +
Sbjct: 83 ----------------------LLQVLVRCKKH-----------REAGDLFRSELLASCE 109
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + S N +++G + ++ EEM G P+ T + GD+D G
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GA 166
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ + G DP++VTY LI+++ + +L +A L M R P+LVTY L++ LCK
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
V A + +M+ G +P+++++N+L+ +CK G + +++ LL M+ G+ P+ T
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K + L A ++ E++ GV+ Y LI LC+ ++ A +L R+
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P + +Y+ ++ + CK + +A EM + P + TY +I C +G+
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 406
Query: 503 EAVSLMDEMLESG-MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EA ++++M ESG +LPD +ING C + +A+ LL K D +Y +
Sbjct: 407 EAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 466
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + G L + L + R G APN +T +I L K
Sbjct: 467 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKA 508
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 135/288 (46%), Gaps = 47/288 (16%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + Y ++H L +K A +ML + C V V+ +I A+
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG--SGCTPDVVVYSSIIH-------AFC 365
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNT 240
K G + E+ KT ++ P +V+ N +++GL KL I + + E+M G + P+
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDV 425
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T++ + + CK+ + + L+++ + G +PD+VTY T+I CK GRL +A YL +
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485
Query: 301 MYRRNVLPDLVTYTTLMNGLCK-----------------------------------EGK 325
M R P++VTYTTL++GLCK G+
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 326 VREAHQLFHRMV--HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
++EA QL RM SPD +Y T++ A +QE++ LL +M
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 152/586 (25%), Positives = 278/586 (47%), Gaps = 23/586 (3%)
Query: 21 FSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQ 80
F + S S I Q S + L++ L P V +I ++K H + L
Sbjct: 2 FPKSFAVSRKISNFIKQASGLRRLASSLATITGSPCPPRFDVAVIADLIEK--QHWSKLG 59
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
+K + P+ E+ R L+ + + L ++ W+ + +I + ++H LA
Sbjct: 60 FHVKDINPN----ELFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAK 115
Query: 141 KFSFAMKMLCELVELVKDCPHSV-DVFQDLISCTEDCN---------WAYVKVGLIRESF 190
++S L V D H V +F + C C AY F
Sbjct: 116 RYSKIRSFLDGFVRNGSD--HQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGF 173
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ F+++ G++ S +SC L+ LLK N +Y+EM R I PN TFN++ +
Sbjct: 174 EAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINAL 233
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK---KGRLNDAFYLYRIMYRRNVL 307
CK G ++K +E ++ G+ P++V+YNTLI YCK G++ A + + M V
Sbjct: 234 CKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVS 293
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+L T+ L++G K+ + + ++F M+ + + P++++YN+LI C GK+ E+ +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM 353
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G+ P+ T ++ G+ K G + AL++ ++ G + +Y+ LI A C+
Sbjct: 354 RDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCK 413
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ +L E + ++G VP + YN L+ LC+ ++ A L D++ ++ + P L T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVT 472
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ L+ +C G S +A L+ EM + G+ P +++ GYC E ++ A +
Sbjct: 473 FHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQME 532
Query: 548 KKFQI-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
K+ ++ + SYN + +++ G L L L G PN +T
Sbjct: 533 KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 192/387 (49%), Gaps = 35/387 (9%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D + + + + N + YC L N K A +L E+VE + ++
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCK----LGGNGKMYKADAVLKEMVE--NEVSPNLT 297
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
F LI D W K + S K F++ LD P++++ N L+NGL I++
Sbjct: 298 TFNILI----DGFW---KDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEA 350
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ ++M G+ PN T++ L + FCKNG + + + ++ +G P YN LI +
Sbjct: 351 IGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YCK G+++D F L M R ++PD+ TY L+ GLC+ G + A +LF ++ ++GL PD
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PD 469
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+++ L+ YC G+ +++ LL EM G+ P T I+++GY KEG L +A N+
Sbjct: 470 LVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRT 529
Query: 405 ELQ---RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+++ R ++++ Y+ L+ Q + A LL + + G VP+ Y
Sbjct: 530 QMEKERRLRMNVAS--YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE------- 580
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTY 488
++K+EMVD+ P + +
Sbjct: 581 ---------IVKEEMVDKGFVPDIEGH 598
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/312 (19%), Positives = 137/312 (43%), Gaps = 9/312 (2%)
Query: 297 LYRIMYRRNVLPDLVT--YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L+R + + PDL YT L+ + +L H + + I S+ +
Sbjct: 70 LFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSF---LDG 126
Query: 355 YCKEGKMQESKSLLYEM-MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
+ + G + S+ + + M + + ++ ++V Y R +G +
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKL 186
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
S L+VAL + NR L + + + P++ +N ++ +LCK + A +
Sbjct: 187 SAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVM 246
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGY 530
++M P++ +Y LI +C +G +G+ A +++ EM+E+ + P+ +LI+G+
Sbjct: 247 EDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGF 306
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ ++ + + + I + +YN++ N G +++ + ++ + + G PN
Sbjct: 307 WKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNL 366
Query: 591 LTCKYMIHSLWK 602
+T +I+ K
Sbjct: 367 ITYHSLINGFCK 378
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 213/408 (52%), Gaps = 7/408 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L N+ A+++L + + DCP V + +I+ + K
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN-------GFFKE 212
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +++ T+ + LD G P++V+ N ++ L K +D+ +V M + G+ PN T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H +C +G + GFL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++ TY TL+ G +G + E H L MV G+ P+ ++ LI AY K+GK+ +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ PDT T ++ K GR+ A+ ++ +S +Y+ LI
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+LC ++ A L+ + G +N +++S CK V ++ L D MV +KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
++ TY LI +C G+ EA L+ M+ GM PD LINGYC
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 211/472 (44%), Gaps = 47/472 (9%)
Query: 84 KPLLPHLGAH-EISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
+ +LP++ + I L + Q+ + + VKN + P Y IVH + +
Sbjct: 228 RGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG--VMPNCRTYNSIVHGYCSSGQP 285
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+ L ++ HS V D+++ ++ K G E+ K F G +
Sbjct: 286 KEAIGFLKKM--------HSDGVEPDVVTYNSLMDY-LCKNGRCTEARKMFDSMTKRGLK 336
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I + LL G + + + + M R GI PN + F+IL + K G VD+
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL-- 320
K+ ++G +PD VTY T+I CK GR+ DA + M + P + Y +L++ L
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 321 ---------------------------------CKEGKVREAHQLFHRMVHRGLSPDIVS 347
CKEG+V E+ +LF MV G+ P+I++
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIIT 516
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+TLI YC GKM E+ LL M+ G+ PD T ++ GY K R+ AL L E++
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
GVS Y+ ++ L Q R AA L I + G L YN ++ LCK +
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+AL + + +++ T+ +I +GR+ EA L + +G++PD
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 212/497 (42%), Gaps = 81/497 (16%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGIC 237
G + F + GF+ ++ LL GL C D+ V M ++G
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTQLGCI 159
Query: 238 PNTHTFNILTHVFC-------------------------------------KNGDVDKVN 260
PN ++NIL C K GD+DK
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 261 GFLEKIEEEGFDPDLVTYNTLISS-----------------------------------Y 285
G ++ + G P++VTYN++I++ Y
Sbjct: 220 GTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C G+ +A + M+ V PD+VTY +LM+ LCK G+ EA ++F M RGL P+I
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+Y TL+ Y +G + E LL M+ NGI+P+ + I++ Y K+G++ A+ + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+++ G++ Y +I LC+ R A E++ + P +YN L+ SLC D
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
A L EM+DR I + ++I C GR E+ L D M+ G+ P+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI+GYC+ +++A LL D +YN + N + + + + L + G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579
Query: 586 FAPNNLTCKYMIHSLWK 602
+P+ +T ++ L++
Sbjct: 580 VSPDIITYNIILQGLFQ 596
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 180/379 (47%), Gaps = 6/379 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + PN T+ IL C G +D L + ++GF D + + L+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--L 341
C R +DA + R M + +P++ +Y L+ GLC E + +EA +L M G
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+VSY T+I + KEG + ++ +EM+ GI P+ T I+ K + A+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K +A + D M R +KP ++TY L+ + G E L+D M+ +G+ P+
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ +LI Y + V++A + ++ DT +Y V + + G + M ++
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ +P N+ +IHSL
Sbjct: 436 IDERLSPGNIVYNSLIHSL 454
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 178/380 (46%), Gaps = 23/380 (6%)
Query: 57 NPNKIV--DLICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+PN V LIC+ K+G +L Q L P G + + + C+S V
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG----TVIGILCKSGRVE 426
Query: 109 -ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A+ +F + D + P + Y ++H L +K+ A +++ E+++ C ++ F
Sbjct: 427 DAMRYFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTI-FFN 483
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I ++ K G + ES K F + +G +P+I++ + L++G +D+ ++
Sbjct: 484 SIID-------SHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKL 536
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M +G+ P+ T+N L + +CK ++ ++E G PD++TYN ++ +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R A LY + +L TY +++GLCK EA ++F + L + +
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N +I A K G+ E+K L + NG+ PD T ++ + ++G L +L + ++
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716
Query: 408 RFGVSISRDIYDYLIVALCQ 427
G + + + + ++ L Q
Sbjct: 717 ENGCTANSRMLNSIVRKLLQ 736
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+ K + VG +P V+ N L+NG K++ ++ ++ EM G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ + I E G +L TYN ++ CK ++A ++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++ + T+ ++ L K G+ EA LF + GL PD+ +Y+ + ++
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G ++E L M NG ++ IV+ + G + A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+ +KP Y ++ K A K+L +V SV + D ++ N
Sbjct: 508 IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV--------SVGMKPDCVTYNTLIN-G 558
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+ + ++ FR+ G P I++ N +L GL + ++Y + G
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+NI+ H CKN D+ + + + T+N +I + K GR ++A L+
Sbjct: 619 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ ++PD+ TY+ + L ++G + E LF M G + + N+++ + G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Query: 360 KMQESKSLLY 369
+ + + L+
Sbjct: 739 DITRAGTYLF 748
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 208/422 (49%), Gaps = 3/422 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E FK + G P I+ C L+ G +L + ++ E + G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N++ +CK G+++ L+++ PD+VTYNT++ S C G+L A +
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +R+ PD++TYT L+ C++ V A +L M RG +PD+V+YN L+ CKEG+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L +M +G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ Q G P+ YN L+ CK + A+ + MV R
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY ++ C G+ +AV +++++ G P +I+G KA
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL K DT +Y+++ + +G + + ++ F R+G PN +T ++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 601 WK 602
K
Sbjct: 530 CK 531
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 238/517 (46%), Gaps = 28/517 (5%)
Query: 24 FSSASSSYSLQIIQDSEH------KSLSNPLYNFLPETQNPNKIVDLI-CSSLKKGDSHL 76
+SS +SS++L+ ++ + H + FL + D+I C++L +G L
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 77 TLLQNDLKPLLPHLGAHEISRVLLR-------CQSDSVS-ALTFFNWVKNDLEIKPTSSN 128
+ K L G+ + V+ C++ ++ AL+ + + + P
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR----MSVSPDVVT 206
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y I+ L + K AM++L +++ +DC V + LI T C + V
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEAT--CRDSGVG-----H 257
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ K + D G P +V+ N L+NG+ K +D+ + +M G PN T NI+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G L + +GF P +VT+N LI+ C+KG L A + M + P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ ++Y L++G CKE K+ A + RMV RG PDIV+YNT++ A CK+GK++++ +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
++ G P T ++ G K G+ A+ L+ E++ + Y L+ L ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A + G P+ +N +M LCK A+ M++R KP+ ++Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
LI G + EA+ L++E+ G++ S +V
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 190/399 (47%), Gaps = 3/399 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I + + + P +V+ N +L L + Q +V + M + P
Sbjct: 181 GYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL C++ V L+++ + G PD+VTYN L++ CK+GRL++A
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P+++T+ ++ +C G+ +A +L M+ +G SP +V++N LI C++
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + +L +M +G P++ + ++ G+ KE ++ A+ + + G Y
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ ALC+D + A +L ++ G P L YN +++ L K A+ L DEM
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KP TY +L+ G+ EA+ E G+ P++ ++ G C + ++
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
A L F + + SY + A +G + +EL
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N + + + + + + MV P + LI FC +G++ +A +++ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
SG +PD V+I+GYC ++N A ++L + D +YN + + G L +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQ 222
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
ME+ R L+ P+ +T +I + +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCR 251
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 163/589 (27%), Positives = 260/589 (44%), Gaps = 34/589 (5%)
Query: 39 SEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLT---LLQNDLKPLL--PHLGAH 93
S H S SN ET D+I S+++ S+ + L + P++ P L
Sbjct: 31 SFHDSTSNHSAPPFSETH----FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDL--- 83
Query: 94 EISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
RVL ++ AL F W ++ + + +C I+ ILA NN A ++ ++
Sbjct: 84 -FVRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVI 142
Query: 154 E---------LVKDCPHS---VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
L+ C S V + LI W Y K ++ + F K +
Sbjct: 143 NANMHRIVDVLIGGCVSSEVSVKILDLLI-------WVYSKKSMVEQCLSVFDKMIKSRL 195
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P + +CN +L L + + + +VY MG GI P T+N L +CK G V +
Sbjct: 196 SPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLD 255
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L +++ G P+ VTYN LI+ KKG A L M + + TY L+ G
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+G + EA L MV +G SP + +YN+ I+ CK G+M ++ L +M+ N + PD
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ ++ GY + G L+ A L EL+ + + Y+ L+ LC+ A L +
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+G P + Y L+ CK S++ A DEM+ ++ Y I +G +
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A SL +EML G PD I V+++G C ++ +A LL I D +Y ++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS-LWKG-MERKF 608
+ E+G L K E+ L G P+ +T +IH KG +ER F
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 199/423 (47%), Gaps = 47/423 (11%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT + Y ++ L + S AM+ L ++ L + V + LI + Y ++
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDM--LANNLLPDVVSYNTLI-------YGYCRL 387
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++F F + + P+IV+ N LL+GL + ++ Q+ EM GI P+ T+
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL + CK G + F +++ EG + D Y T I K G + AF L M
Sbjct: 448 TILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PDL+ Y +++GLCK G + EA +L +MV G+ PD V+Y ++I A+ + G++++
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + YEM+ G+ P T +++ G+ +GRL A E+Q G+
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI------------ 615
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+P++ YN L+ LCK + A EMV++ I P
Sbjct: 616 -----------------------LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFP 652
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY---CMEKDVNKAE 540
+ +Y LI C +G EA+SL +ML+ G+ PDS L+ C + V + E
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLE 712
Query: 541 ALL 543
+LL
Sbjct: 713 SLL 715
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 234/459 (50%), Gaps = 5/459 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ L ++ S A ++ + +L C + + LI C V +
Sbjct: 159 PNVVTYTTLIKGLCMEHRISEATRLFLRMQKL--GCTPNAVTYGTLIKGL--CQTGNVNI 214
Query: 184 GL-IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
L + + V +P +++ + +++GL K+ D+ +++EEM G+ P+ +
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L H FC G D+ +++ ++G PD+VT++ LI + CK+G++ +A L +M
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R ++P+L+TY +L++G C G + A +LF M +GL PD +SY TLI YCK K++
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ +L EM+ G P+ T +++G ++G++ A L ++ +GVS + IY +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+++ F A L + + ++E Y+ L++ LCK + A L +++ ++
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + TY +I FC +G+ A L ++M E+G PD L+ G+C + + L
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
L +K + S V +M +D K ++L +F
Sbjct: 575 LHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 258/559 (46%), Gaps = 54/559 (9%)
Query: 93 HEISRVLLRCQSDSVSALT---FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
H +S L C++ +++A+ FF+ + I P SS + ++ LA N +S L
Sbjct: 56 HPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISS-FNRLLGGLAKINHYS----QL 110
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
L ++ S D+F I CN V + E+ L G+ P++V+
Sbjct: 111 FSLYNEMRLAGLSPDLFTLSILANCLCN-----VNRVSEALAAMAGILRRGYIPNVVTYT 165
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV------------- 256
L+ GL + I + +++ M ++G PN T+ L C+ G+V
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225
Query: 257 ----------------------------DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
D+ E+++ +G PD+++Y+TLI +C
Sbjct: 226 ASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCA 285
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G+ + + +L+ M + V PD+VT++ L++ LCKEGKV EA +L M+ RG+ P++++Y
Sbjct: 286 GKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITY 345
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N+LI +C G + ++ L M G+ PD + ++ GY K ++ A+NL E+ +
Sbjct: 346 NSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ 405
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G S + Y L+ L Q + A L + G + +IY ++ LCK D + +
Sbjct: 406 VGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFE 465
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+ L +E+ N K ++ Y LI C G+ A L +++ + G+ PD ++I+
Sbjct: 466 AMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIH 525
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
G+C V+ A L + D +YN + F E L ++++L + ++ +P
Sbjct: 526 GFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSP 585
Query: 589 NNLTCKYMIHSLWKGMERK 607
N +C ++ L K + K
Sbjct: 586 NAASCTIVVDMLCKDEKYK 604
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 213/422 (50%), Gaps = 1/422 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+ K F + LD G P+ L+NG K + + ++ + +G+ P
Sbjct: 463 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP 522
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T + H KNG V + +++E+G PD+ TY++LIS +CK+G + AF L+
Sbjct: 523 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 582
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P++ Y L++GLCK G ++ A +LF M +GL PD V+Y+T+I YCK
Sbjct: 583 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 642
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ SL +EM G+ P +F +V G KEG + A+NL E+ + G + + +
Sbjct: 643 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-F 701
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ + A+ L + + +P Y +++ CK + +A LL EM +
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 761
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ TY +L+ + +G+S E +L ++M+ G+ PD ++I +C E ++ +
Sbjct: 762 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 821
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K + ++ + + DL++ +L LG P+ C ++
Sbjct: 822 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVR 881
Query: 599 SL 600
S
Sbjct: 882 SF 883
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 203/417 (48%), Gaps = 35/417 (8%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ V D+ +C+ + +K G ++E+ K F + + G P + + + L++G K
Sbjct: 516 HALGVLPDVQTCSAFIH-GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+++ +++++EM GI PN +N L CK+GD+ + + + E+G +PD VTY+T
Sbjct: 575 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 634
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG---------------- 324
+I YCK + +AF L+ M + V P Y L++G CKEG
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Query: 325 ------------------KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
K++EA QLF M+ + + PD V+Y T+I +CK GKM+E+
Sbjct: 695 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L EM + DT T ++ GY K G+ L ++ GV Y +I A C
Sbjct: 755 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+++ A L + + G + I++ L+ +LCK + + +A L DEM + +KPSL+
Sbjct: 815 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L+ F G+ EA + + + G++PD+ L+NG + D A L+
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 931
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 208/486 (42%), Gaps = 75/486 (15%)
Query: 177 NWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ + GL R E+ TF + G +P +C+ L++G ++ ID+ ++ + M
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 270
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
GI N T+N+L H CK G ++K L+ + G P+ T+ LI YC++ +
Sbjct: 271 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 330
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLC------------------------------ 321
A L M +RN++P V+Y ++NGLC
Sbjct: 331 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390
Query: 322 -----KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
EG++ EA +L M G++PDI YN +I K GKM+E+ + L E+ G G+
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 450
Query: 377 YPDTFTCQIIVQGYGKEGR-----------------------------------LLSALN 401
PD T + GY K G+ L+ AL+
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ L GV I L ++ R A + + + G VP + Y+ L+ C
Sbjct: 511 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 570
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V A L DEM + I P++ Y AL+ C G A L D M E G+ PDS
Sbjct: 571 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 630
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+I+GYC ++V +A +L K + YNA+ + ++GD+ K M L +
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 690
Query: 582 LRLGFA 587
L+ GFA
Sbjct: 691 LQKGFA 696
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 201/451 (44%), Gaps = 36/451 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + + + +G +P+ + L+ G + + + + ++ +EM + + P+
Sbjct: 291 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 350
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ + + C D+ N LEK+ G P++V Y+TLI Y +GR+ +A L M
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD+ Y +++ L K GK+ EA + RGL PD V++ I Y K GKM
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
Query: 362 QESKSLLYEMM---------------------GN--------------GIYPDTFTCQII 386
E+ EM+ GN G+ PD TC
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G K GR+ AL + EL+ G+ Y LI C+ A L + + G
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ IYN L++ LCK + A L D M ++ ++P TY +I +C EA S
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L EM G+ P S + L++G C E D+ KA L +K T S+N + + +
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFATTLSFNTLIDGYC 709
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + +L + + P+++T +I
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 215/466 (46%), Gaps = 18/466 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAY 180
KP S +CL++ + A+++L E+ + LV + L C +D + A
Sbjct: 311 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC-KDLSLAN 369
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K K G +P++V + L+ G I++ ++ + M G+ P+
Sbjct: 370 ----------KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDI 419
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N + K G +++ + +L +I+ G PD VT+ I Y K G++ +A +
Sbjct: 420 FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 479
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M ++P+ YT L+NG K G + EA +F + G+ PD+ + + I K G+
Sbjct: 480 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+QE+ + E+ G+ PD FT ++ G+ K+G + A L E+ G++ + IY+
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ A L + + + G P Y+ +++ CK ++VA+A L EM +
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P Y AL+ C G +A++L EML+ G LI+GYC + +A
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEAS 718
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK----LMELQKRFL 582
L K + D +Y V + + G + + E+Q+R L
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 764
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 78/160 (48%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y K+G E F F K + G +P V+ ++ K + + + +++ +E+ G+
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
++L CK D+ + + L+++ E G P L +TL+ S+ + G++++A +
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ + ++PD T L+NG + +A L ++V
Sbjct: 896 FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 213/411 (51%), Gaps = 8/411 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P+ ++ N LL+GL + +YE M + G P+ T+N L H FCK G++D+
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ + GF PD+VTYN LI+ +CK +L++A + + M N++PD+VTY +L+NG
Sbjct: 65 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK-MQESKSLLYEMMGNGIYP 378
LCK G+V EA L +V +G SP++++Y+TLI C+E + + E+ L ++ G P
Sbjct: 125 LCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T I++ G KE R+ A L L + G+ Y I LC+ R A +L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G VP + +N ++ LCK V +A +L M + P+ ++ LIC C
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYC---MEKDVNKAEALLGFFAKKFQIYDT 555
G+ +A++ EML+ G+ P +L++G C E + +A L +K ++ D
Sbjct: 302 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 361
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+Y+A+ + + G L L G PN T +I L G+E+
Sbjct: 362 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLC-GLEK 411
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 219/420 (52%), Gaps = 7/420 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + + + G+ P +V+ N LL+G K+ +D+ ++++ + G P+ T+
Sbjct: 24 GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTY 83
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FCK +D+ L+++ E PD+VTYN+L++ CK GR+++A L +
Sbjct: 84 NALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---IVD 140
Query: 304 RNVLPDLVTYTTLMNGLCKEGK-VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P+++TY+TL++GLC+E + V EA +LF ++ +G P++ +YN LI KE ++
Sbjct: 141 KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVN 200
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L ++ +G+ PD T + + G K GR+ AL ++ ++ G ++ +I
Sbjct: 201 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVI 260
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC++ R A LL + G P+ +N L+ C+ A+ EM+ R +K
Sbjct: 261 NGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVK 320
Query: 483 PSLSTYRALICCFCGI---GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P++ TY L+ C GR EA++L D M+E G +PD LI+G ++ A
Sbjct: 321 PTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDA 380
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LLG K I + +YN++ + + + +EL + G P+ +T +I +
Sbjct: 381 RRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 206/389 (52%), Gaps = 7/389 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + E+ K F + GF P +V+ N L+NG K + +D+ ++ + M + P
Sbjct: 54 GFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVP 113
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR-LNDAFYL 297
+ T+N L + CKNG VD+ I ++GF P+++TY+TLIS C++ R +++A L
Sbjct: 114 DVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKL 170
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + ++ P++ TY L++GL KE +V EA +LF +V GL PD ++Y I CK
Sbjct: 171 FGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 230
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+++++ +L +M G PD + ++ G KE R+ A L+ ++ G S +
Sbjct: 231 AGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS 290
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC---DSVADALLLKD 474
++ LI C+ + A + + + + G P++ YN L++ LCK + +A+ L D
Sbjct: 291 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M+++ P + TY ALI G+ +A L+ M G +P+ LI+G C +
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFN 563
V++A L +K + DT +Y + +
Sbjct: 411 KVDEALELFVAMVEKGCVPDTITYGTIIS 439
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 175/376 (46%), Gaps = 39/376 (10%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + G PN T+N L C G + E++ + G+ PD+VTYNTL+ +CK G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L++A ++ +R +PD+VTY L+NG CK K+ EA ++ RMV L PD+V+YN+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L+ CK G++ E++ L+ + G P+ T
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVIT---------------------------- 149
Query: 411 VSISRDIYDYLIVALCQDNRPFA-ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
Y LI LC++ R + A L + + GY P + YN L++ L K D V +A
Sbjct: 150 -------YSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEA 202
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +V ++P TY I C GR +A+ ++ +M E G +PD +ING
Sbjct: 203 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 262
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C EK V++AE LL K + S+N + G K M K L+ G P
Sbjct: 263 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 322
Query: 590 NLTCKYMIHSLWKGME 605
+T ++ L K +
Sbjct: 323 VVTYNILVDGLCKARQ 338
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 213/408 (52%), Gaps = 7/408 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L N+ A+++L + + DCP D++S T N + K
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCP------PDVVSYTTVIN-GFFKE 212
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +++ T+ + LD G P++V+ + ++ L K +D+ +V M + G+ PN T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H +C +G + GFL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++ TY TL+ G +G + E H L MV G+ P+ ++ LI AY K+GK+ +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ PDT T ++ K GR+ A+ ++ +S +Y+ LI
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+LC ++ A L+ + G +N +++S CK V ++ L D MV +KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ TY LI +C G+ EA L+ M+ GM PD LINGYC
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 211/472 (44%), Gaps = 47/472 (9%)
Query: 84 KPLLPHLGAHE-ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
+ +LP++ + I L + Q+ + + VKN + P Y IVH + +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG--VMPNCRTYNSIVHGYCSSGQP 285
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+ L ++ HS V D+++ ++ K G E+ K F G +
Sbjct: 286 KEAIGFLKKM--------HSDGVEPDVVTYNSLMDY-LCKNGRCTEARKMFDSMTKRGLK 336
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I + LL G + + + + M R GI PN + F+IL + K G VD+
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
K+ ++G +PD VTY T+I CK GR+ DA + M + P + Y +L++ LC
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
KEG+V E+ +LF MV G+ PDI++
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+TLI YC GKM E+ LL M+ G+ PD T ++ GY K R+ AL L E++
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
GVS Y+ ++ L Q R AA L I + G L YN ++ LCK +
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+AL + + +++ T+ +I +GR+ EA L + +G++PD
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 180/379 (47%), Gaps = 6/379 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + PN T+ IL C G +D L + ++GF D + + L+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--L 341
C R +DA + R M + +P++ +Y L+ GLC E + +EA +L M G
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+VSY T+I + KEG + ++ +EM+ GI P+ T I+ K + A+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K +A + D M R +KP ++TY L+ + G E L+D M+ +G+ P+
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ +LI Y + V++A + ++ DT +Y V + + G + M ++
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ +P N+ +IHSL
Sbjct: 436 IDERLSPGNIVYNSLIHSL 454
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 205/462 (44%), Gaps = 46/462 (9%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGIC 237
G + F + GF+ ++ LL GL C D+ V M ++G
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTQLGCI 159
Query: 238 PNTHTFNILTHVFC-------------------------------------KNGDVDKVN 260
PN ++NIL C K GD+DK
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
G ++ + G P++VTY+++I++ CK ++ A + M + V+P+ TY ++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G+ +EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ P+
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++QGY +G L+ L+ + R G+ + ++ LI A + + A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ Q G P Y ++ LCK V DA+ ++M+D + P Y +LI C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A L+ EML+ G+ D+ +I+ +C E V ++E L + D +Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G + + +L + +G P+ +T +I+ K
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 214/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ +C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH--------- 277
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ N L++ L K + ++++ M + G+
Sbjct: 278 --GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G P+ ++ LI +Y K+G+++ A
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + PD VTY T++ LCK G+V +A + F +M+ LSP + YN+LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K ++K L+ EM+ GI DT I+ + KEGR++ + L + R GV
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C + AT LL + G P YN L+ CK + DAL+L EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + +L G P+ T M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 597 IHSL 600
+L
Sbjct: 696 AENL 699
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 177/380 (46%), Gaps = 23/380 (6%)
Query: 57 NPNKIV--DLICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+PN V LIC+ K+G +L Q L P G + + + C+S V
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG----TVIGILCKSGRVE 426
Query: 109 -ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A+ +F + D + P + Y ++H L +K+ A +++ E+++ C ++ F
Sbjct: 427 DAMRYFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTI-FFN 483
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I ++ K G + ES K F + +G +P I++ + L++G +D+ ++
Sbjct: 484 SIID-------SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M +G+ P+ T+N L + +CK ++ ++E G PD++TYN ++ +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R A LY + +L TY +++GLCK EA ++F + L + +
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N +I A K G+ E+K L + NG+ PD T ++ + ++G L +L + ++
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716
Query: 408 RFGVSISRDIYDYLIVALCQ 427
G + + + + ++ L Q
Sbjct: 717 ENGCTANSRMLNSIVRKLLQ 736
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+ K + VG +P V+ N L+NG K++ ++ ++ EM G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ + I E G +L TYN ++ CK ++A ++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++ + T+ ++ L K G+ EA LF + GL PD+ +Y+ + ++
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G ++E L M NG ++ IV+ + G + A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 9/248 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y ++ K A K+L +V SV + D ++ N Y
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMV--------SVGMKPDCVTYNTLIN-GYC 560
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + ++ FR+ G P I++ N +L GL + ++Y + G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NI+ H CKN D+ + + + T+N +I + K GR ++A L+ +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++PD+ TY+ + L ++G + E LF M G + + N+++ + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740
Query: 362 QESKSLLY 369
+ + L+
Sbjct: 741 TRAGTYLF 748
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 200/403 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G ++ S N L+N L +LN + V +M ++GI P+ TFN L + C G++ +
Sbjct: 122 GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEA 181
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G ++ G PD+++Y+T+I+ CK G + A L R M + P+LV YTT+++
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ V +A L MV RG+ PD+V+Y+T++ +C G + E+ L EM+G + P+
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPN 301
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T T I+V G KEG + A + + + G + Y+ L+ C +N+ A +L+
Sbjct: 302 TVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLD 361
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P + YN L+ CK + +A L EM ++ + P TY L+ C +G
Sbjct: 362 IMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA++L EM SG+LPD L++G C +++A LL + D YN
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYN 481
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G L EL + G P T MI L K
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLK 524
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 206/414 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I+E+ F + + G QP ++S + ++NGL K Q+ +M G PN +
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY 235
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ CK+ V+ L ++ + G PD+VTY+T++ +C G LN+A L+ M
Sbjct: 236 TTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
RNV+P+ VT+T L++GLCKEG V EA +F M +G P+ +YN L+ YC +M E
Sbjct: 296 RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDE 355
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ +L M+ G P + I++ GY K RL A +L+VE+ ++ Y L+
Sbjct: 356 AQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQ 415
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LCQ RP A +L + + G +P L Y+ L++ LCK + +AL L M + I+P
Sbjct: 416 GLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEP 475
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y LI G+ A L ++ G+ P + ++I G E ++A L
Sbjct: 476 DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELF 535
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ ++ SYN + F ++ D S + L + F+ ++ T + ++
Sbjct: 536 RKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID + M R+ P+ F K V +++ G ++ + N
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ C+ + A + M++ + PD +T+ TL+NG C EG+++EA LF+ MV RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD++SY+T+I CK G + LL +M G P+ I+ K+ + A+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L+ E+ G+ Y ++ C AT L + +P+ + L++ L
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK V++A + + M + +P+ TY AL+ +C + EA ++D M++ G P
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVV 372
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+LINGYC + +++A++LL ++K DT +Y+ + + G + + L K
Sbjct: 373 HSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKE 432
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
G P+ +T ++ L K
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCK 454
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 216/421 (51%), Gaps = 2/421 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + K D G P ++ N +L+GL K +++ + +M G+ PN TFNIL
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C+ G + + +E + + PD TYN +IS +CK+GR+ +A L M +
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS 334
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+VTY TL+NG + G E +L M RG+ P+ V+YN ++ + K+GKM E
Sbjct: 335 PDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKT 394
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ +M +G PD T ++ + K G++ A L+ E+ R G+ + + ++ ALC+
Sbjct: 395 VRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCR 454
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ + A LL + GY Y L+ K + + AL L DEM ++ I PS+ T
Sbjct: 455 ERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIIT 514
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y ++I C +G++ +A+ +DE+LESG++PD +I+GYC E V KA
Sbjct: 515 YNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+K D + N + ++G L K ++L ++ G + ++ +I SL K E++
Sbjct: 575 EKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCK--EKR 632
Query: 608 F 608
F
Sbjct: 633 F 633
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 227/483 (46%), Gaps = 17/483 (3%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
S +S F +++K + +K ++++ +++H N+F A+++L ++ + CP
Sbjct: 176 HSIRLSKAVFTDFIK--IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDY--GCPPD 231
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+ ++ K G + E+ + G P+ + N L+ G +L +
Sbjct: 232 NITYNTILD-------GLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ V E M + + P+ T+N++ FCK G + + E++E PD+VTYNTLI
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ + G + F L M R + P+ VTY ++ K+GK+ E + +M G
Sbjct: 345 NGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL 404
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PDIV+YNTLI +CK GKM E+ L+ EM G+ D T +++ +E +L A +L
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDL 464
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ +R G + Y LI+ + + A L + + + +PS+ YN ++ LC+
Sbjct: 465 LCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQ 524
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
A+ DE+++ + P TY +I +C G+ +A ++M+E PD
Sbjct: 525 MGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVT 584
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF------NMFAEDGDLSKLME 576
C L+ G C E + KA L + K + D SYN + F E DL + ME
Sbjct: 585 CNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEME 644
Query: 577 LQK 579
+K
Sbjct: 645 EKK 647
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 184/371 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G I E+ + + ++ P +V+ N L+NG + ++ +++ EEM G+ P
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ T+N++ F K G +D+V+ + K+EE G PD+VTYNTLIS +CK G++++AF L
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ + D VT T++ LC+E K+ EAH L RG D VSY TLI Y K
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K ++ L EM I P T ++ G + G+ A++ + EL G+ Y
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I CQ+ + A ++ + + P + N L+ LCK + AL L + +
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWIS 610
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +Y +I C R GEA L++EM E + PD ++ G +
Sbjct: 611 KGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKD 670
Query: 539 AEALLGFFAKK 549
AE + A+K
Sbjct: 671 AEEFISKIAEK 681
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 36/303 (11%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W +VK G + E KT RK + G P IV+ N L++ K+ +D+ +++ +EMGR G+
Sbjct: 381 W-FVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLK 439
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFL---------------------------------- 263
+ T N + C+ +D+ + L
Sbjct: 440 MDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRL 499
Query: 264 -EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++++E+ P ++TYN++I+ C+ G+ N A + ++PD +TY T+++G C+
Sbjct: 500 WDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQ 559
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG+V +A Q ++MV + PD+V+ NTL+ CKEG ++++ L + G D +
Sbjct: 560 EGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVS 619
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ KE R A +L+ E++ + Y+ ++ L R A + +I
Sbjct: 620 YNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIA 679
Query: 443 QDG 445
+ G
Sbjct: 680 EKG 682
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 89/227 (39%), Gaps = 38/227 (16%)
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL---------- 460
+ IS+ + D I A RP A + R+ + G P+L N L+ +L
Sbjct: 120 LHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIR 179
Query: 461 ----------------------------CKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
C + +A+ + +M D P TY ++
Sbjct: 180 LSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTIL 239
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C GR EA L+ +M G+ P+ +L+ G C + +A ++ ++ +
Sbjct: 240 DGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVV 299
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
D +YN + + F + G +++ M L++ L +P+ +T +I+
Sbjct: 300 PDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLING 346
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 162/587 (27%), Positives = 259/587 (44%), Gaps = 34/587 (5%)
Query: 41 HKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLT---LLQNDLKPLL--PHLGAHEI 95
H S SN ET D+I S+++ S+ + L + P++ P L
Sbjct: 33 HDSTSNHSAPPFSETH----FQDVISKSIREKPSNFSNYYWLSHQFGPVIVDPDL----F 84
Query: 96 SRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE- 154
RVL ++ AL F W ++ + + +C I+ ILA NN A ++ ++
Sbjct: 85 VRVLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINA 144
Query: 155 --------LVKDCPHS---VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
L+ C S V + LI W Y K ++ + F K + P
Sbjct: 145 NMHRIVDVLIGGCVSSEVSVKILDLLI-------WVYSKKSMVEQCLSVFDKMIKSRLSP 197
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ +CN +L L + + + +VY MG GI P T+N L +CK G V + L
Sbjct: 198 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL 257
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ G P+ VTYN LI+ KKG A L M + + TY L+ G +
Sbjct: 258 SEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G + EA L MV +G SP + +YN+ I+ CK G+M ++ L +M+ N + PD +
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GY + G L+ A L EL+ + + Y+ L+ LC+ A L +
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G P + Y L+ CK S++ A DEM+ ++ Y I +G +
Sbjct: 438 EGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSR 497
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A SL +EML G PD I V+++G C ++ +A LL I D +Y ++ +
Sbjct: 498 AFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIH 557
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS-LWKG-MERKF 608
E+G L K E+ L G P+ +T +IH KG +ER F
Sbjct: 558 AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 189/397 (47%), Gaps = 44/397 (11%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT + Y ++ L + S AM+ L ++ L + V + LI + Y ++
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDM--LANNLLPDVVSYNTLI-------YGYCRL 387
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++F F + + P+IV+ N LL+GL + ++ Q+ EM GI P+ T+
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL + CK G + F +++ EG + D Y T I K G + AF L M
Sbjct: 448 TILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PDL+ Y +++GLCK G + EA +L +MV G+ PD V+Y ++I A+ + G++++
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRK 567
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + YEM+ G+ P T +++ G+ +GRL A E+Q G+
Sbjct: 568 GREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI------------ 615
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+P++ YN L+ LCK + A EMV++ I P
Sbjct: 616 -----------------------LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFP 652
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ +Y LI C +G EA+SL +ML+ G+ PDS
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 120/216 (55%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K+G +F + L GF P ++ N +++GL KL +++ ++ ++M G+ P+
Sbjct: 490 LKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ + H +NG + K ++ +G P +VTY LI + KGRL AF +
Sbjct: 550 VTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + +LP+++TY +L+NGLCK ++ +A+ F MV +G+ P+ SY LI C G
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
QE+ SL +M+ G+ PD+ T +++ GK+ +L
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 101/181 (55%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + E+ + +K + G P V+ +++ L+ + + +++ EM G+ P+
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L H G +++ + +++E+G P+++TYN+LI+ CK R++ A+ + M
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P+ +YT L+N C G +EA L+ +M+ RG+ PD +++ L+ K+ K+
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Query: 362 Q 362
Q
Sbjct: 706 Q 706
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V D ++ T + A+++ G +R+ + F + L G PS+V+ L++G +++
Sbjct: 545 VIPDYVTYTSIIH-AHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ + EM GI PN T+N L + CK +D+ F ++ E+G P+ +Y LI+
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINE 663
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
C G +A LY+ M R V PD T++ L+ L K+ K++ H
Sbjct: 664 NCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 217/405 (53%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F + +G P +V+ N L++G K +++ Q+ EM + G +
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVV 271
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + F K G ++K + +++ +G ++VT++T + ++CK+G + +A L+ M
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P+ TYT+L++G CK G++ +A L MVH+GL P++V+Y ++ CKEGK+
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ ++L M G+ + ++ G+ AL+L+ +++ G+ + +Y L
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+D + A SLL ++ G P+ IY +M++L K ++A+ L +++D
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ TY ALI C G EA+S ++M E G+ P+ Q LI+G+C +NKA
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
L+ K D Y ++ + + + +L L+ + + G
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 205/407 (50%), Gaps = 8/407 (1%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW------AYVKVGLIRESFKTFRK 195
F+ + LC+ ELV+ ++ V + C+ D Y K G + E + +
Sbjct: 203 FNIVIDFLCKEGELVE--ARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSE 260
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
G +V+ N L+N K +++ + + EM R G+ N TF+ FCK G
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGL 320
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
V + ++ G P+ TY +L+ CK GRL+DA L M + ++P++VTYT
Sbjct: 321 VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 380
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
+++GLCKEGKV EA + M G+ + + Y TLI + + + LL +M G
Sbjct: 381 MVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+ D ++ G K+ ++ A +L+ ++ G+ + IY ++ AL + + A
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+LL +I G+ P++ Y L++ LCK S+++A+ ++M + + P++ Y ALI F
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
C IG +A+ LM+EM++ GM D + LI+GY + ++ A AL
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL 607
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 174/364 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K GL++E+ K F + G P+ + L++G K +D + +EM G+ P
Sbjct: 314 AFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 373
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ ++ CK G V + + L +E G + + Y TLI + A L
Sbjct: 374 NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLL 433
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + D+ Y TL+ GLCK+ KV EA L H+M GL P+ V Y T++ A K
Sbjct: 434 NQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK E+ +LL++++ +G P+ T ++ G K G + A++ +++ G+ + Y
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L+ + G +Y L++ K ++ DA LK +M++
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ L Y I FC + EA ++ EM+ +G+ PD + LI Y ++ +
Sbjct: 614 SGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEE 673
Query: 539 AEAL 542
A +L
Sbjct: 674 ASSL 677
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 176/410 (42%), Gaps = 15/410 (3%)
Query: 7 KKQSFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLIC 66
K+Q N ++ FS+F A L +Q++ + +P +VD C
Sbjct: 297 KRQGVVANVVT---FSTFVDAFCKEGL--VQEAMKLFAQMRVRGMMPNEFTYTSLVDGTC 351
Query: 67 SSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTS 126
+ + D+ + L + + L+P++ + + L C+ V+ + +K
Sbjct: 352 KAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL-CKEGKVAEADNVLSLMERGGVKANE 410
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
Y ++H NN A+ +L ++ K V ++ LI W K +
Sbjct: 411 LLYTTLIHGHFMNNNSERALDLLNQMKN--KGMELDVSLYGTLI-------WGLCKDQKV 461
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ K G +P+ V +++ L K + + ++ G PN T+ L
Sbjct: 462 DEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCAL 521
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
CK G + + K+ E G DP++ Y LI +CK G LN A +L M + +
Sbjct: 522 IDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGM 581
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
D V YT+L++G K+ +++A L +M+ GL D+ Y I +C MQE++
Sbjct: 582 SLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARG 641
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+L EM+G GI PD +++ Y K G + A +L E++ S + D
Sbjct: 642 VLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSSCTED 691
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 204/363 (56%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K R D +P++V N +++GL K +++ + +Y EM GI PN
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + FC G + + G L ++ + +P++ TY L+ + CK+G++ +A L +M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P++V+Y TLM+G C G+V+ A Q+FH MV +G++P++ SYN +I CK ++
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +LL E++ + P+T T ++ G+ K GR+ SAL+L+ E+ G Y L
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC++ AT+L ++ + G P+ Y L++ LCK +A L ++ +
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGC 426
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAE 540
+ ++ TY +I C G EA+++ +M E+G +PD+ ++I EKD N KAE
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRS-LFEKDQNDKAE 485
Query: 541 ALL 543
LL
Sbjct: 486 KLL 488
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 226/448 (50%), Gaps = 8/448 (1%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
LV+D P ++ F ++ + VK+ + F++ G +P + + N L+N
Sbjct: 3 LVRDTPPIME-FNKIVG-------SLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINC 54
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L + + V ++ ++G PNT T N L C G+V K F +K+ +GF D
Sbjct: 55 FCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMD 114
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
V+Y TL++ CK G A L R++ R+ P++V Y T+++GLCK+ V EA+ L+
Sbjct: 115 QVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M RG+ P++++Y+TLI+ +C G++ E+ LL EM+ I P+ +T I++ KEG
Sbjct: 175 EMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEG 234
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
++ A NL+ + + GV + Y+ L+ C A + + Q G P++ YN
Sbjct: 235 KVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYN 294
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+++ LCK V +A+ L E++ +N+ P+ TY +LI FC +GR A+ L+ EM
Sbjct: 295 IMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G D L++ C ++++KA AL ++ + +Y A+ + + G
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNA 414
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L + L G N T MI L K
Sbjct: 415 QKLFQHLLVKGCRINVWTYNVMISGLCK 442
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 203/405 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I+ N ++ L+K+ ++++M GI P+ T NIL + FC G +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L KI + G+ P+ +T NTL+ C KG + + + + + + D V+Y TL+NGLCK
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ R A +L + R P++V YNT+I CK+ + E+ L EM GI+P+ T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ G+L+ A L+ E+ ++ + Y L+ ALC++ + A +LL +
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G P++ YN LM+ C V +A + MV + + P++ +Y +I C R
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA++L+ E+L M+P++ LI+G+C + A LL + Q D +Y ++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ ++ +L K L + G PN T +I L KG K
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHK 412
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 212/423 (50%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G + SF K L +G+QP+ ++ N L+ GL + + ++++ G +
Sbjct: 55 FCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMD 114
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G+ L IE+ P++V YNT+I CK +N+A+ LY
Sbjct: 115 QVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + P+++TY+TL+ G C G++ EA L + M+ + ++P++ +Y L+ A CKEG
Sbjct: 175 EMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEG 234
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+K+LL M G+ P+ + ++ GY G + +A + + + GV+ + Y+
Sbjct: 235 KVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYN 294
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ R A +LL + VP+ Y+ L++ CK + AL L EM R
Sbjct: 295 IMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHR 354
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +L+ C +A +L +M E G+ P+ LI+G C A
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNA 414
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L K + +YN + + ++G L + + ++ + G P+ +T + +I S
Sbjct: 415 QKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRS 474
Query: 600 LWK 602
L++
Sbjct: 475 LFE 477
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 198/386 (51%), Gaps = 1/386 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +++S K + GFQ VS LLNGL K+ ++ + PN +
Sbjct: 94 GEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMY 153
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK+ V++ +++ G P+++TY+TLI +C G+L +AF L M
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMIL 213
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+N+ P++ TYT LM+ LCKEGKV+EA L M G+ P++VSYNTL+ YC G++Q
Sbjct: 214 KNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQN 273
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + + M+ G+ P+ ++ I++ K R+ A+NL+ E+ + + Y LI
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLID 333
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ R +A LL+ + G + Y L+++LCK ++ A L +M +R I+P
Sbjct: 334 GFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY ALI C GR A L +L G + V+I+G C E +++A A+
Sbjct: 394 NKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMK 453
Query: 544 GFFAKKFQIYDTESYNAVF-NMFAED 568
+ I D ++ + ++F +D
Sbjct: 454 SKMEENGCIPDAVTFEIIIRSLFEKD 479
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 155/304 (50%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ + G + E+F + + P++ + L++ L K + + + M + G+
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN ++N L +C G+V + ++G +P++ +YN +I CK R+++A L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R + +N++P+ VTY++L++G CK G++ A L M HRG D+V+Y +L+ A CK
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ ++ +L +M GI P+ +T ++ G K GR +A L L G I+
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWT 432
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ +I LC++ A ++ ++ ++G +P + ++ SL + D A L EM+
Sbjct: 433 YNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Query: 478 DRNI 481
+++
Sbjct: 493 AKDL 496
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 203/401 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+I + N L+N L + + V ++ ++G PN TFN L C G + +V
Sbjct: 89 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 148
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ EGF P++VTY TLI+ CK G + A L R M + N PD+V YT++++
Sbjct: 149 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 208
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V +A LF M+H+G+SP I +YN+LI A C + + +LL EM+ + I P+
Sbjct: 209 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 268
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG+++ A ++V + + GV + Y+ L+ C + A + +
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G+ P + Y+ L+ CK + A+ L +EM + + P+ TY L+ C +G
Sbjct: 329 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ G +PD +L++ C + +++A ALL D + Y
Sbjct: 389 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 448
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
V + G+L +L G PN T MI+ L
Sbjct: 449 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 489
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 210/462 (45%), Gaps = 13/462 (2%)
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLD 198
+ FA +L ++++L ++ F LI C E G I E F K +
Sbjct: 109 RLGFAFSVLAKILKLGHQ--PNIATFNTLIRGLCVE---------GKIGEVLHLFDKMIG 157
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GFQP++V+ L+NGL K+ ++ M + P+ + + CK+ V +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ +G P + TYN+LI + C L M ++P++V ++T+++
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
LCKEGKV EAH + M+ RG+ P++V+YN L+ +C +M E+ + M+ G P
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 337
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D + ++ GY K R+ A+ L E+ R + + Y L+ LC R A +L
Sbjct: 338 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 397
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ G +P Y L++ LCK + +A+ L + N+ P + Y +I C
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G A L + G+ P+ ++ING C + + +A L G +K + +Y
Sbjct: 458 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 517
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
N + F + + + ++L + L GF+ + T ++ L
Sbjct: 518 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 174/374 (46%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N +D + M + P+ F L K V +++ G P++
Sbjct: 35 LNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI 94
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C RL AF + + + P++ T+ TL+ GLC EGK+ E LF +
Sbjct: 95 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK 154
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P++V+Y TLI CK G + LL M PD I+ K+ +
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 214
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A NL E+ G+S S Y+ LI ALC T+LL + +P++ I++
Sbjct: 215 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++++LCK V +A + D M+ R ++P++ TY AL+ C EAV + D M+ G
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
PD LINGYC + + KA L +K I +T +Y+ + + G L +
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 576 ELQKRFLRLGFAPN 589
L + G P+
Sbjct: 395 ALFHEMVTRGQIPD 408
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 193/413 (46%), Gaps = 11/413 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ S SA +P Y I+ L + + + A + E++ +
Sbjct: 175 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH--QGISP 232
Query: 162 SVDVFQDLISCTED-CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S+ + LI + C W +V L + ++ P++V + +++ L K
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALL--------NEMVNSKIMPNVVIFSTVVDALCKEGK 284
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + V + M + G+ PN T+N L C ++D+ + + +GF PD+V+Y+T
Sbjct: 285 VMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYST 344
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ YCK R+ A YL+ M R+ ++P+ VTY+TLM+GLC G++++A LFH MV RG
Sbjct: 345 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 404
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD VSY L+ CK ++ E+ +LL + G+ + PD I++ G + G L +A
Sbjct: 405 QIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 464
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L L G+ + Y +I LCQ A+ L + + GY P+ YN +
Sbjct: 465 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGF 524
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ + + L EM+ R +ST L+ G ++ E L+
Sbjct: 525 LRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 153/328 (46%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P + + L+ S K + L M + P++ T L+N C ++ A +
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ G P+I ++NTLI C EGK+ E L +M+G G P+ T ++ G K
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ L+ +++ +Y +I +LC+D + A +L + G PS+
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ +LC L +EMV+ I P++ + ++ C G+ EA ++D M+
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ G+ P+ L++G+C+ ++++A + K D SY+ + N + + +
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K M L + R PN +T ++H L
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGL 384
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++NT S L+DA + M + P + +T L+ + K L H+M
Sbjct: 26 SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G+ P+I + N LI ++C ++ + S+L +++ G P+ T +++G EG++
Sbjct: 86 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L+L ++ G + Y LI LC+ AA LL + Q P + +Y +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++SLCK V A L EM+ + I PS+ TY +LI C + +L++EM+ S +
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+P+ I +++ C E V +A ++ K+ + +YNA+ + ++ + ++
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + GFAP+ ++ +I+ K
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCK 351
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 203/426 (47%), Gaps = 12/426 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ N LL+GL + + + ++ +M PN TF L +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G + + L+++ E+G P +TY T++ CKKG A L R M +++
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++ LCK+G+ +A LF M +G+ PD+ +YN++I +C G+ +++ L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ G+ + Y +I C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + + G P+L +N L++ C + D + L EM + + +T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI F +G A+ L+ EM+ SG+ PD C L++G C + A +
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 548 KKFQIYDT-----------ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K + D ++YN + + +G + EL + G P+ +T M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 597 IHSLWK 602
I L K
Sbjct: 553 IDGLCK 558
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 199/399 (49%), Gaps = 1/399 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V L+ ++++ D +Y++M R I + ++F IL FC +
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD+VT+NTL+ C + R+++A L+ M+ P++VT+TTLMNGLC+
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG++ EA L RM+ GL P ++Y T++ CK+G + +LL +M + I P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ K+GR A NL E+Q G+ Y+ +IV C R A LL+ +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G P+ LI+GYC K ++ LL + + DT +YN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L + + G P+ +TC ++ L
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 210/452 (46%), Gaps = 20/452 (4%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-------- 283
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F DL + + G ++ + ++ L+ P +V+ N L+N +K
Sbjct: 284 KGIFPDLFT-YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T++ + FCK +D + +G P+L+T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M ++ D TY TL++G G + A L M+ GL
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ +TL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + + +G + P++
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L+ CK V D L L EM R I + TY LIC F +G A+ + EM
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 248/546 (45%), Gaps = 57/546 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L ++ S A+ + ++ E C +V F
Sbjct: 133 ALSTFGKITK-LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT--CRPNVVTFTT 189
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-------LNCI 221
L++ + G I E+ + ++ G QP+ ++ +++G+ K LN +
Sbjct: 190 LMN-------GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 222 DQCWQV-----------------------------YEEMGRIGICPNTHTFNILTHVFCK 252
+ +V + EM GI P+ T+N + FC
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G L+++ E PD+VTYN LI+++ K+G+ +A LY M R ++P+ +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+++++G CK+ ++ A +F+ M +G SP+++++NTLI YC ++ + LL+EM
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ DT T ++ G+ G L +AL+L+ E+ G+ D L+ LC + +
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 433 AATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A + + + + +G P ++ YN L+ L +A L +EM R I
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY ++I C R EA + D M P+ LINGYC V+
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L ++ + + +Y + F + G+++ +++ + + G P+ +T + M+ LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Query: 602 KGMERK 607
E K
Sbjct: 663 SKEELK 668
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 183/419 (43%), Gaps = 22/419 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+ +P + I+D +C + D+ + K + P L + S ++ C S S
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN-SMIVGFCSSGRWSD 308
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
+ +I P Y +++ KF A ++ E+ L + + + +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSM 366
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I + K + + F G P++++ N L++G ID ++
Sbjct: 367 ID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM G+ +T T+N L H F GD++ L+++ G PD+VT +TL+ C G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 290 RLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+L DA ++++M + V PD+ TY L++GL EGK EA +L+ M H
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD ++Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
L L E+ R G+ + Y LI + A + + + G P ++ I N L
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 20/331 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ N+ A M + K C ++ F LI Y
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA--TKGCSPNLITFNTLID-------GYC 406
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
I + + + + G + N L++G + ++ + +EM G+CP+
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 242 TFNILTHVFCKNGDV-DKVNGF--LEKIEEE--------GFDPDLVTYNTLISSYCKKGR 290
T + L C NG + D + F ++K +++ G +PD+ TYN LIS +G+
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A LY M R ++PD +TY+++++GLCK+ ++ EA Q+F M + SP++V++ T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YCK G++ + L EM GI + T ++ G+ K G + AL++ E+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERI 441
V ++ L A ++LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+C+ LL+GL + ++++ M +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+TTL+NG CK G+V + +LF M RG+ + ++Y TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I + K G + + + EM+ +G+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 230/524 (43%), Gaps = 46/524 (8%)
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
++++ IKP + Y +++++L NK +V + H V F LI
Sbjct: 158 MEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVR--RRIRHDVSTFNILIK---- 211
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
A K +R + + G P + ++ G ++ +D ++ E+M G
Sbjct: 212 ---ALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
Query: 236 ICPNTH-TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
CP T T N+L + FCK G +D+ F+++ EGF PD TYNTL++ CK G A
Sbjct: 269 -CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHA 327
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ M + PD+ TY +L++GLCK G++ EA ++ +MV R SP+ V+YN +I +
Sbjct: 328 MEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISS 387
Query: 355 YCKEGKMQESKS-----------------------------------LLYEMMGNGIYPD 379
CKE ++ E+ L EM G G PD
Sbjct: 388 LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPD 447
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
FT +++ +L ALNL+ E++ G + + IY+ LI C++ R A + +
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G YN L++ LCK V DA L D+M+ ++P TY +L+ FC G
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+A ++ M SG PD LI+G C V A LL K + +YN
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYN 627
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
V + + M L + L P+ +T K + L G
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 235/525 (44%), Gaps = 18/525 (3%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEIS--RVLLR--CQS 104
Y P+T+ N +++++ + K L L+++ ++ H++S +L++ C++
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANK-----LKLVESAHSSMVRRRIRHDVSTFNILIKALCKA 216
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
V + P + + I+ A+++ ++VE CP +
Sbjct: 217 HQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEY--GCPCTDV 274
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
LI+ + K G I ++ ++ + GF+P + N L+NGL K+
Sbjct: 275 TVNVLIN-------GFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHA 327
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+V + M G+ P+ +T+N L CK G++++ L+++ P+ VTYN +ISS
Sbjct: 328 MEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISS 387
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK+ R+++A + R++ + +LPD+ T+ +L+ GLC + A LF M +G PD
Sbjct: 388 LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPD 447
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+YN LI + C K++E+ +LL EM NG + ++ G+ K R+ A +
Sbjct: 448 EFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFD 507
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E++ GVS Y+ LI LC+ R A L++++ +G P YN L+ CK
Sbjct: 508 EMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTG 567
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ A + M P + TY LI C GR A L+ + GM+
Sbjct: 568 DIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYN 627
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+I ++A L K + D +Y V+ G
Sbjct: 628 PVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 179/351 (50%), Gaps = 1/351 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G I E+ K + + P+ V+ N +++ L K N +D+ ++ + GI P+
Sbjct: 355 KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVC 414
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + + E+++ +G PD TYN LI S C +L +A L + M
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++V Y TL++G CK ++ EA ++F M +G+S D V+YNTLI CK ++
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ +M+ G+ PD FT ++ + K G + A ++V + G + Y L
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATL 594
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A+ LL I G V + YN ++++L K + +A+ L EM+D++
Sbjct: 595 ISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE 654
Query: 482 KPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P TY+ + C G G GEAV EM+E G +P+ +L G C
Sbjct: 655 PPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 191/401 (47%), Gaps = 12/401 (2%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A+K+L ++V +DC + + +IS + K + E+ + R G P
Sbjct: 362 AVKILDQMVS--RDCSPNAVTYNAIIS-------SLCKENRVDEATEIARLLTSKGILPD 412
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ + N L+ GL + ++EEM G P+ T+N+L C + +++ L+
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK 472
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E G ++V YNTLI +CK R+ +A ++ M + V D VTY TL++GLCK
Sbjct: 473 EMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSK 532
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V +A QL +M+ GL PD +YN+L+ +CK G ++++ ++ M +G PD T
Sbjct: 533 RVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYA 592
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G K GR+ A L+ +Q G+ ++ Y+ +I AL + NR A L +
Sbjct: 593 TLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDK 652
Query: 445 GYVPSLEIYNELMESLCKCDS-VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P Y + LC + +A+ EM++R P S++ L C +
Sbjct: 653 SEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDT 712
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
V L+D ++E + +I I G+ + A + LG
Sbjct: 713 LVKLVDMIMEKAKFSEREIS--TIRGFLKIRKFQDALSTLG 751
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 165/366 (45%), Gaps = 5/366 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P++ + + K G + + LE+++ G + D + + SY K ++ +
Sbjct: 95 PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154
Query: 298 YRIM---YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
++M YR + PD Y L+N L K++ MV R + D+ ++N LI A
Sbjct: 155 VKVMEDEYR--IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKA 212
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK +++ + ++ EM G+ PD T I+QGY + G L AL + ++ +G +
Sbjct: 213 LCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCT 272
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ LI C+ R A S ++ +G+ P YN L+ LCK A+ + D
Sbjct: 273 DVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVD 332
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M+ + P + TY +LI C +G EAV ++D+M+ P++ +I+ C E
Sbjct: 333 AMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
V++A + K + D ++N++ + M+L + G P+ T
Sbjct: 393 RVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYN 452
Query: 595 YMIHSL 600
+I SL
Sbjct: 453 MLIDSL 458
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 202/403 (50%), Gaps = 1/403 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+N LN + + V ++ ++G P+T TF L C G +
Sbjct: 99 GIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDA 158
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ EGF P++VTY TLI+ CK G N A L R M + N PD+V YT++++
Sbjct: 159 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDS 218
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF +MV +G+SPDI +Y +LI + C + + +LL +M+ + I PD
Sbjct: 219 LCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 278
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG++ A ++V + GV + Y+ L+ C + A + +
Sbjct: 279 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 338
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +GY P++ YN L+ CK + A L +EM + + P+ TY L+ C +G
Sbjct: 339 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVG 397
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ G +PD R+L++ C + +++A ALL D + Y
Sbjct: 398 RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 457
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
V + G+L ++ G PN T MI+ L +
Sbjct: 458 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCR 500
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 219/483 (45%), Gaps = 18/483 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLIS--CTEDCN 177
I P ++++ N+ FA +L ++++L H D F LI C E
Sbjct: 100 IPPDVYTLNILINSFCHLNRLGFAFSVLAKILKL----GHQPDTATFTTLIRGLCVE--- 152
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
G I ++ F K + GFQP++V+ L+NGL K+ + ++ M +
Sbjct: 153 ------GKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQ 206
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ + + CK+ V + K+ +G PD+ TY +LI S C L
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M ++PD+V ++T+++ LCKEGK+ EAH + M+ RG+ P++V+YN L+ +C
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ +M E+ + M+ NG P+ + ++ GY K R+ A L E+ + + +
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ C R A +L + G +P L Y L++ LCK + +A+ L +
Sbjct: 387 YNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
N+ P + Y +I C G A + + G+ P+ + ++ING C ++
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A L D +YN + ++ + + ++L + L GF+ + T ++
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565
Query: 598 HSL 600
L
Sbjct: 566 EML 568
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 186/389 (47%), Gaps = 5/389 (1%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N +D + M + P+T FN L K V +++ G PD+
Sbjct: 45 LNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV 104
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C RL AF + + + PD T+TTL+ GLC EGK+ +A LF +
Sbjct: 105 YTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDK 164
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P++V+Y TLI CK G + LL M PD I+ K+ +
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224
Query: 396 LLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A NL ++ G IS DI+ Y LI +LC T+LL ++ +P + I+
Sbjct: 225 VTEAFNLFSKM--VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 282
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ ++++LCK + +A + D M+ R ++P++ TY AL+ C EAV + D M+
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 342
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G P+ LINGYC + ++KA L +K I +T +YN + + G L
Sbjct: 343 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQD 401
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + G P+ T + ++ L K
Sbjct: 402 AIALFHEMVAHGQIPDLATYRILLDYLCK 430
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 124/241 (51%), Gaps = 1/241 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K F + G+ P+++S N L+NG K+ +D+ ++EEM + + PNT T+N L
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 391
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C G + ++ G PDL TY L+ CKK L++A L + + N+
Sbjct: 392 HX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMD 450
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ YT +++G+C+ G++ A +F + +GL P++ +Y +I C+ G + E+ L
Sbjct: 451 PDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM GNG PD T I QG + L A+ L+ E+ G S L+ LC
Sbjct: 511 FMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Query: 428 D 428
D
Sbjct: 571 D 571
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 155/321 (48%), Gaps = 9/321 (2%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C W +V L + ++ P +V + +++ L K I + V + M G
Sbjct: 258 CEWKHVTTLL--------NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRG 309
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ PN T+N L C ++D+ + + G+ P++++YNTLI+ YCK R++ A
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 369
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
YL+ M ++ ++P+ VTY TLM+ C G++++A LFH MV G PD+ +Y L+
Sbjct: 370 YLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 428
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK+ + E+ +LL + G+ + PD I++ G + G L +A ++ L G+ +
Sbjct: 429 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y +I LC+ A L + +G P YN + + L + A+ L E
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548
Query: 476 MVDRNIKPSLSTYRALICCFC 496
M+ R +ST L+ C
Sbjct: 549 MLARGFSADVSTTTLLVEMLC 569
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 149/310 (48%), Gaps = 13/310 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G I E+ + G +P++V+ N L++G + +D+ +V++ M G P
Sbjct: 288 ALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAP 347
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++N L + +CK +DK E++ ++ P+ VTYNTL+ C GRL DA L+
Sbjct: 348 NVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALF 406
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +PDL TY L++ LCK+ + EA L + + PDI Y +I C+
Sbjct: 407 HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++ ++ + + G+ P+ T I++ G + G L A L +E+ G S Y
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ + L Q+ A LL+ + G+ + L+E LC D+ +D
Sbjct: 527 NTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC------------DDKLD 574
Query: 479 RNIKPSLSTY 488
+++K LS +
Sbjct: 575 QSVKQILSEF 584
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 156/327 (47%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+++N S L+DA + M + P V + L+ + K + L ++
Sbjct: 35 LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G+ PD+ + N LI ++C ++ + S+L +++ G PDT T +++G EG+
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL+L ++ G + Y LI LC+ AA LL + Q P + +Y
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++SLCK V +A L +MV + I P + TY +LI C + +L+++M+ S
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++PD I +++ C E + +A ++ + + +YNA+ + ++ + +
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + G+APN ++ +I+ K
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCK 361
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 203/426 (47%), Gaps = 12/426 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ N LL+GL + + + ++ +M PN TF L +
Sbjct: 133 ALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G + + L+++ E+G P +TY T++ CKKG A L R M +++
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++ LCK+G+ +A LF M +G+ PD+ +YN++I +C G+ +++ L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ G+ + Y +I C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + + G P+L +N L++ C + D + L EM + + +T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI F +G A+ L+ EM+ SG+ PD C L++G C + A +
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 548 KKFQIYDT-----------ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K + D ++YN + + +G + EL + G P+ +T M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 597 IHSLWK 602
I L K
Sbjct: 553 IDGLCK 558
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 199/399 (49%), Gaps = 1/399 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V L+ ++++ D +Y++M R I + ++F IL FC +
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ + G PD+VT+NTL+ C + R+++A L+ M+ P++VT+TTLMNGLC+
Sbjct: 137 FGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG++ EA L RM+ GL P ++Y T++ CK+G + +LL +M + I P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ K+GR A NL E+Q G+ Y+ +IV C R A LL+ +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G P+ LI+GYC K ++ LL + + DT +YN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L + + G P+ +TC ++ L
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 210/452 (46%), Gaps = 20/452 (4%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-------- 283
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F DL + + G ++ + ++ L+ P +V+ N L+N +K
Sbjct: 284 KGIFPDLFT-YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T++ + FCK +D + +G P+L+T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M ++ D TY TL++G G + A L M+ GL
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ +TL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + + +G + P++
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L+ CK V D L L EM R I + TY LIC F +G A+ + EM
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 248/546 (45%), Gaps = 57/546 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L ++ S A+ + ++ E C +V F
Sbjct: 133 ALSTFGKLTK-LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT--CRPNVVTFTT 189
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-------LNCI 221
L++ + G I E+ + ++ G QP+ ++ +++G+ K LN +
Sbjct: 190 LMN-------GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 222 DQCWQV-----------------------------YEEMGRIGICPNTHTFNILTHVFCK 252
+ +V + EM GI P+ T+N + FC
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G L+++ E PD+VTYN LI+++ K+G+ +A LY M R ++P+ +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+++++G CK+ ++ A +F+ M +G SP+++++NTLI YC ++ + LL+EM
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ DT T ++ G+ G L +AL+L+ E+ G+ D L+ LC + +
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 433 AATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A + + + + +G P ++ YN L+ L +A L +EM R I
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY ++I C R EA + D M P+ LINGYC V+
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L ++ + + +Y + F + G+++ +++ + + G P+ +T + M+ LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Query: 602 KGMERK 607
E K
Sbjct: 663 SKEELK 668
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 183/419 (43%), Gaps = 22/419 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+ +P + I+D +C + D+ + K + P L + S ++ C S S
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN-SMIVGFCSSGRWSD 308
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
+ +I P Y +++ KF A ++ E+ L + + + +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSM 366
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I + K + + F G P++++ N L++G ID ++
Sbjct: 367 ID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM G+ +T T+N L H F GD++ L+++ G PD+VT +TL+ C G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 290 RLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+L DA ++++M + V PD+ TY L++GL EGK EA +L+ M H
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD ++Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
L L E+ R G+ + Y LI + A + + + G P ++ I N L
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 20/331 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ N+ A M + K C ++ F LI Y
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA--TKGCSPNLITFNTLID-------GYC 406
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
I + + + + G + N L++G + ++ + +EM G+CP+
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 242 TFNILTHVFCKNGDV-DKVNGF--LEKIEEE--------GFDPDLVTYNTLISSYCKKGR 290
T + L C NG + D + F ++K +++ G +PD+ TYN LIS +G+
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A LY M R ++PD +TY+++++GLCK+ ++ EA Q+F M + SP++V++ T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YCK G++ + L EM GI + T ++ G+ K G + AL++ E+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERI 441
V ++ L A ++LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+C+ LL+GL + ++++ M +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+TTL+NG CK G+V + +LF M RG+ + ++Y TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I + K G + + + EM+ +G+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 191/362 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+ E+ F + + G P +V + L++GL + + + + ++EM GI + +
Sbjct: 158 KDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVY 217
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L H + G +V FL + + GF PD T+ LI CK+G++ +A + +M
Sbjct: 218 TYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELM 277
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + PD++TY TLMNGLC G++ +A +LF + RG+ ++ SYN LI YCK+ K+
Sbjct: 278 HHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKI 337
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L EM G+ P T T ++ + GR+ +A L VE+Q G + Y L
Sbjct: 338 DEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVL 397
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++ A L + I + + P++E+++ L++ +C+ + +A DE+ +
Sbjct: 398 LDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGL 457
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P Y LI C G EAV L+ +M E G LPDS V+I E ++++A
Sbjct: 458 EPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517
Query: 542 LL 543
LL
Sbjct: 518 LL 519
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 196/393 (49%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ + +++ L K + ++ EM GI P+ ++ L C+ G + + F +
Sbjct: 146 VFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 205
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E G D+ TYN+LI + G + + +M R PD T+T L++GLCKEG
Sbjct: 206 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 265
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
KV EA Q+ M H+G PDI++YNTL+ C G+++++ L + GI + F+
Sbjct: 266 KVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 325
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I++ GY K+ ++ A L E++ G+ S Y+ LI ALCQ R A L +
Sbjct: 326 ILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 385
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G L Y L++ LCK + +A+ L + KP++ + L+ C G+ EA
Sbjct: 386 GQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 445
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
DE+ ++G+ PD+ +LING C + +++A LL +K + D+ ++N +
Sbjct: 446 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 505
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
++ ++ + ++L + F+P+ ++
Sbjct: 506 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 199/444 (44%), Gaps = 42/444 (9%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L GF+P V+ L+ G+ N I Q+++EM G+ + T+ IL + CK
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKA--- 125
Query: 257 DKVNGFLEKIEEE---GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
+ G K+ E+ D+ TY +I S CK G +A ++ M +LPD+V Y
Sbjct: 126 -RKTGLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVY 184
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
++LM+GLC+ G+++EA + F M RG+S D+ +YN+LI + G +E L M+
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G PD FT I++ G KEG++ A ++ + G Y+ L+ LC +
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
AT L E + G ++ YN L+ CK + +A L +EM + +KPS TY LI
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364
Query: 494 CFCGIGRSGEAVSLMDEMLESGML-----------------------------------P 518
C GR A L EM G P
Sbjct: 365 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP 424
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ ++ +L++G C + +A +K DT +YN + N G LS+ ++L
Sbjct: 425 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL 484
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ G P+++T +I +L K
Sbjct: 485 WQMEEKGCLPDSITFNVIIQNLLK 508
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 151/312 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ GL +E +D GF P + L++GL K + + Q+ E M G P+
Sbjct: 228 RAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDIL 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + C G ++ E + + G ++ +YN LI+ YCK ++++AF L+ M
Sbjct: 288 TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM 347
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P VTY TL+ LC+ G+VR A +LF M G + +Y L+ CK G +
Sbjct: 348 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHL 407
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ L + P+ I++ G + G+L A E+ + G+ Y+ L
Sbjct: 408 EEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 467
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC A LL ++ + G +P +N ++++L K + + +A+ L +EM +RN
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 527
Query: 482 KPSLSTYRALIC 493
P + L+C
Sbjct: 528 SPDEAVTSMLLC 539
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 134/263 (50%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
VG + ++ K F D G + ++ S N L+NG K ID+ ++++EEM G+ P+T T
Sbjct: 299 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVT 358
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L C++G V +++ G L TY L+ CK G L +A L++ +
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++ ++ L++G+C+ GK+ EA + F + GL PD ++YN LI C +G +
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL++M G PD+ T +I+Q KE + A+ L+ E++ S + L+
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Query: 423 VALCQDNRPFAATSLLERIGQDG 445
D + AA L Q G
Sbjct: 539 CLASFDPQWHAALVSLPNALQKG 561
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 203/401 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+I + N L+N L + + V ++ ++G PN TFN L C G + +V
Sbjct: 98 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEV 157
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ EGF P++VTY TLI+ CK G + A L R M + N PD+V YT++++
Sbjct: 158 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDS 217
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V +A LF M+H+G+SP I +YN+LI A C + + +LL EM+ + I P+
Sbjct: 218 LCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPN 277
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG+++ A ++V + + GV + Y+ L+ C + A + +
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G+ P + Y+ L+ CK + A+ L +EM + + P+ TY L+ C +G
Sbjct: 338 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ G +PD +L++ C + +++A ALL D + Y
Sbjct: 398 RLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYT 457
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
V + G+L +L G PN T MI+ L
Sbjct: 458 IVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGL 498
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 210/462 (45%), Gaps = 13/462 (2%)
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLD 198
+ FA +L ++++L ++ F LI C E G I E F K +
Sbjct: 118 RLGFAFSVLAKILKLGHQ--PNIATFNTLIRGLCVE---------GKIGEVLHLFDKMIG 166
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GFQP++V+ L+NGL K+ ++ M + P+ + + CK+ V +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ +G P + TYN+LI + C L M ++P++V ++T+++
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
LCKEGKV EAH + M+ RG+ P++V+YN L+ +C +M E+ + M+ G P
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAP 346
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D + ++ GY K R+ A+ L E+ R + + Y L+ LC R A +L
Sbjct: 347 DVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALF 406
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ G +P Y L++ LCK + +A+ L + N+ P + Y +I C
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G A L + G+ P+ ++ING C + + +A L G +K + +Y
Sbjct: 467 GELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTY 526
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
N + F + + + ++L + L GF+ + T ++ L
Sbjct: 527 NLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 174/374 (46%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N +D + M + P+ F L K V +++ G P++
Sbjct: 44 LNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNI 103
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C RL AF + + + P++ T+ TL+ GLC EGK+ E LF +
Sbjct: 104 YTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDK 163
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P++V+Y TLI CK G + LL M PD I+ K+ +
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 223
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A NL E+ G+S S Y+ LI ALC T+LL + +P++ I++
Sbjct: 224 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++++LCK V +A + D M+ R ++P++ TY AL+ C EAV + D M+ G
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
PD LINGYC + + KA L +K I +T +Y+ + + G L +
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 576 ELQKRFLRLGFAPN 589
L + G P+
Sbjct: 404 ALFHEMVTRGQIPD 417
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 193/413 (46%), Gaps = 11/413 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ S SA +P Y I+ L + + + A + E++ +
Sbjct: 184 CKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIH--QGISP 241
Query: 162 SVDVFQDLISCTED-CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S+ + LI + C W +V L + ++ P++V + +++ L K
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALL--------NEMVNSKIMPNVVIFSTVVDALCKEGK 293
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + V + M + G+ PN T+N L C ++D+ + + +GF PD+V+Y+T
Sbjct: 294 VMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYST 353
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ YCK R+ A YL+ M R+ ++P+ VTY+TLM+GLC G++++A LFH MV RG
Sbjct: 354 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 413
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD VSY L+ CK ++ E+ +LL + G+ + PD I++ G + G L +A
Sbjct: 414 QIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 473
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L L G+ + Y +I LCQ A+ L + + GY P+ YN +
Sbjct: 474 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGF 533
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ + + L EM+ R +ST L+ G ++ E L+
Sbjct: 534 LRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 153/328 (46%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P + + L+ S K + L M + P++ T L+N C ++ A +
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ G P+I ++NTLI C EGK+ E L +M+G G P+ T ++ G K
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ L+ +++ +Y +I +LC+D + A +L + G PS+
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ +LC L +EMV+ I P++ + ++ C G+ EA ++D M+
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ G+ P+ L++G+C+ ++++A + K D SY+ + N + + +
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K M L + R PN +T ++H L
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGL 393
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 155/326 (47%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++NT S L+DA + M + P + +T L+ + K L H+M
Sbjct: 35 SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G+ P+I + N LI ++C ++ + S+L +++ G P+ T +++G EG++
Sbjct: 95 DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L+L ++ G + Y LI LC+ AA LL + Q P + +Y +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++SLCK V A L EM+ + I PS+ TY +LI C + +L++EM+ S +
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+P+ I +++ C E V +A ++ K+ + +YNA+ + ++ + ++
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + GFAP+ ++ +I+ K
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCK 360
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 214/413 (51%), Gaps = 4/413 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ K F + + +G +P +++ + ++NGL K+ Q+ ++M G PN +N
Sbjct: 26 IMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNT 85
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ CK+ V + F ++ +EG PD+ TY++++ +C GR+N+A L++ M RN
Sbjct: 86 IIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERN 145
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V+P+ VT+T L++GLCK+ + EA +F M +GL PD+ +YN L+ YC +M E++
Sbjct: 146 VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQ 205
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIV 423
L M G P+ + I++ G+ K GR+ A L+ E+ S++ DI+ Y L+
Sbjct: 206 KLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSH--KSLTPDIFTYSTLMR 263
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ RP A LL+ + G +P+L Y+ +++ LCK + +A L M + I+P
Sbjct: 264 GFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEP 323
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y LI C G+ A L + G+ P V+I+G N+A L
Sbjct: 324 NIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELF 383
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A + ++ +YN + F +GD + L + + GF+ ++ T + +
Sbjct: 384 REMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 229/456 (50%), Gaps = 9/456 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L ++PT + ++ L K A+K+ E+V++ + D+I+ + N
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHE--------PDVITYSTIIN-G 54
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K+G + + +K + G +P++V+ N +++ L K + + + EM + GI P+
Sbjct: 55 LCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPD 114
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T++ + H FC G V++ +++ E P+ VT+ LI CKK +++A+ ++
Sbjct: 115 VFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFE 174
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+ TY L++G C ++ EA +LF+ M +G +P++ SYN LI +CK G
Sbjct: 175 TMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSG 234
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E+K LL EM + PD FT +++G+ + GR A L+ E+ +G+ + Y
Sbjct: 235 RIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS 294
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC+ A LL+ + + P++ IY L+E +C + A L + +
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
I+P++ TY +I G S EA L EM +G LP+S V+I G+ D A
Sbjct: 355 GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
L+ K D+ ++ + ++ + D +S+ M
Sbjct: 415 VRLIEEMVGKGFSADSSTFRMLSDLESSDEIISQFM 450
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 183/378 (48%), Gaps = 10/378 (2%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M ++G+ P TFN L C + +++ + G +PD++TY+T+I+ CK G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
A L + M + P++V Y T+++ LCK+ V EA F MV G+ PD+ +Y++
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE-LQRF 409
++ +C G++ E+ SL +M+ + P+ T I++ G K+ R++S LV E +
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKK-RMISEAWLVFETMTEK 179
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ Y+ L+ C ++ A L + + G P++ YN L+ CK + +A
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L EM +++ P + TY L+ FC +GR EA L+ EM G+LP+ ++++G
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED----GDLSKLMELQKRFLRLG 585
C +++A LL K Q E ++ + E G L EL G
Sbjct: 300 LCKHGHLDEAFELL----KAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 586 FAPNNLTCKYMIHSLWKG 603
P +T MI L KG
Sbjct: 356 IQPTVVTYTVMISGLLKG 373
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 209/422 (49%), Gaps = 3/422 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E FK + G P I+ C L+ G ++ + ++ E + G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDV 172
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N++ +CK G+++ L+++ PD+VTYNT++ S C G+L A +
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +R+ PD++TYT L+ C++ V +A +L M RG +PD+V+YN L+ CKEG+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L +M +G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ + G P+ YN L+ CK + A+ + MV R
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY ++ C G+ +AV +++++ G P +I+G KA
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL K DT +Y+++ + +G + + ++ F R+G PN +T ++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGL 529
Query: 601 WK 602
K
Sbjct: 530 CK 531
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/517 (26%), Positives = 239/517 (46%), Gaps = 28/517 (5%)
Query: 24 FSSASSSYSLQIIQDSEH------KSLSNPLYNFLPETQNPNKIVDLI-CSSLKKGDSHL 76
FSSA+SS+ L+ ++ + H + FL + D+I C++L +G +
Sbjct: 91 FSSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRM 150
Query: 77 TLLQNDLKPLLPHLGAHEISRVLLR-------CQSDSVS-ALTFFNWVKNDLEIKPTSSN 128
+ K L G+ + V+ C++ ++ AL+ + + + P
Sbjct: 151 GKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR----MSVSPDVVT 206
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y I+ L + K AM++L +++ +DC V + LI T C + V +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEAT--CRDSGVG-----Q 257
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ K + D G P +V+ N L+NG+ K +D+ + +M G PN T NI+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G L + +GF P +VT+N LI+ C+KG L A + M + P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ ++Y L++G CKE K+ A + RMV RG PDIV+YNT++ A CK+GK++++ +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
++ G P T ++ G K G+ A+ L+ E++ + Y L+ L ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A + G P+ +N +M LCK A+ M++R KP+ ++Y
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSY 557
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
LI G + EA+ L++E+ G++ S +V
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQV 594
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 190/399 (47%), Gaps = 3/399 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I + + + P +V+ N +L L + Q +V + M + P
Sbjct: 181 GYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL C++ V + L+++ + G PD+VTYN L++ CK+GRL++A
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P+++T+ ++ +C G+ +A +L M+ +G SP +V++N LI C++
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + +L +M +G P++ + ++ G+ KE ++ A+ + + G Y
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ ALC+D + A +L ++ G P L YN +++ L K A+ L DEM
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KP TY +L+ G+ EA+ E G+ P++ ++ G C + ++
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDR 537
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
A L + + SY + A +G + +EL
Sbjct: 538 AIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALEL 576
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N + L + + + + MV P + LI FC +G++ +A +++ +
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
SG +PD V+I+GYC ++N A ++L + D +YN + + G L +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQ 222
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHS 599
ME+ R L+ P+ +T +I +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEA 248
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 242/548 (44%), Gaps = 55/548 (10%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLR--CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHIL 136
L + L+ LLP H ++ + S +FFNW+ + + TS +YC + + L
Sbjct: 52 LASSLRRLLPSFKPHHFIDLINQNPFSLSPSSLFSFFNWLSSIPTFRHTSQSYCAMANFL 111
Query: 137 AWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI--SCTEDCNW-------AYVKVGLIR 187
+ + F ++ LV K + VF ++ + T N+ AY G +
Sbjct: 112 SAHQMFQECQSIIRFLVSR-KGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVS 170
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + FR + FQ C +LL+ ++ N W Y E+ G P +NIL
Sbjct: 171 DAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILI 230
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FCK G + +I + G P V++NTLI+ CK L++ F L + M +
Sbjct: 231 NKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY 290
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLF---------------------------------- 333
PD+ TY+ L++GLCKEG++ A QLF
Sbjct: 291 PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNT 350
Query: 334 -HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
H+M+ G+ PD+V YNTL+ CK G + +++ L+ EM G+ PD T ++ GY K
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCK 410
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
EG L SA+ + + GV + + LI C+D R A L + + G P
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y +++ CK +V L EM KP + TY L+ C G+ A L++ ML
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ PD +L+ G+C KAE LL +K I D Y ++ + + +
Sbjct: 531 NLGVTPDDITYNILLEGHCKN---GKAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS---- 583
Query: 573 KLMELQKR 580
L + QKR
Sbjct: 584 -LKDRQKR 590
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
E+LE G P Q +LIN +C E + A+ + K+ T S+N + N +
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L + L+K P+ T +IH L K
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCK 305
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 212/408 (51%), Gaps = 7/408 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L N+ A+++L + + DCP V + +I+ + K
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN-------GFFKE 212
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +++ T+ + LD G P++V+ + ++ L K +D+ +V M + G+ PN T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H +C +G + GFL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++ TY TL+ G +G + E H L MV G+ P+ ++ LI AY K+GK+ +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ PDT T ++ K GR+ A+ ++ +S +Y+ LI
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+LC ++ A L+ + G +N +++S CK V ++ L D MV +KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ TY LI +C G+ EA L+ M+ GM PD LINGYC
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 211/472 (44%), Gaps = 47/472 (9%)
Query: 84 KPLLPHLGAHE-ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
+ +LP++ + I L + Q+ + + VKN + P Y IVH + +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG--VMPNCRTYNSIVHGYCSSGQP 285
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+ L ++ HS V D+++ ++ K G E+ K F G +
Sbjct: 286 KEAIGFLKKM--------HSDGVEPDVVTYNSLMDY-LCKNGRCTEARKMFDSMTKRGLK 336
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I + LL G + + + + M R GI PN + F+IL + K G VD+
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
K+ ++G +PD VTY T+I CK GR+ DA + M + P + Y +L++ LC
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
KEG+V E+ +LF MV G+ PDI++
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+TLI YC GKM E+ LL M+ G+ PD T ++ GY K R+ AL L E++
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
GVS Y+ ++ L Q R AA L I + G L YN ++ LCK +
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+AL + + +++ T+ +I +GR+ EA L + +G++PD
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 180/379 (47%), Gaps = 6/379 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + PN T+ IL C G +D L + ++GF D + + L+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--L 341
C R +DA + R M + +P++ +Y L+ GLC E + +EA +L M G
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+VSY T+I + KEG + ++ +EM+ GI P+ T I+ K + A+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K +A + D M R +KP ++TY L+ + G E L+D M+ +G+ P+
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ +LI Y + V++A + ++ DT +Y V + + G + M ++
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ +P N+ +IHSL
Sbjct: 436 IDERLSPGNIVYNSLIHSL 454
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 205/462 (44%), Gaps = 46/462 (9%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGIC 237
G + F + GF+ ++ LL GL C D+ V M ++G
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTQLGCI 159
Query: 238 PNTHTFNILTHVFC-------------------------------------KNGDVDKVN 260
PN ++NIL C K GD+DK
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
G ++ + G P++VTY+++I++ CK ++ A + M + V+P+ TY ++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G+ +EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ P+
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++QGY +G L+ L+ + R G+ + ++ LI A + + A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ Q G P Y ++ LCK V DA+ ++M+D + P Y +LI C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A L+ EML+ G+ D+ +I+ +C E V ++E L + D +Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G + + +L + +G P+ +T +I+ K
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 214/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ +C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH--------- 277
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ N L++ L K + ++++ M + G+
Sbjct: 278 --GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G P+ ++ LI +Y K+G+++ A
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + PD VTY T++ LCK G+V +A + F +M+ LSP + YN+LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K ++K L+ EM+ GI DT I+ + KEGR++ + L + R GV
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C + AT LL + G P YN L+ CK + DAL+L EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + +L G P+ T M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 597 IHSL 600
+L
Sbjct: 696 AENL 699
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 173/371 (46%), Gaps = 21/371 (5%)
Query: 64 LICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
LIC+ K+G +L Q L P G + + + C+S V A+ +F +
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG----TVIGILCKSGRVEDAMRYFEQM 435
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
D + P + Y ++H L +K+ A +++ E+++ C ++ F +I
Sbjct: 436 I-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTI-FFNSIID----- 487
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ K G + ES K F + +G +P I++ + L++G +D+ ++ M +G+
Sbjct: 488 --SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGM 545
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T+N L + +CK ++ ++E G PD++TYN ++ + R A
Sbjct: 546 KPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKE 605
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
LY + +L TY +++GLCK EA ++F + L + ++N +I A
Sbjct: 606 LYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+K L + NG+ PD T ++ + ++G L +L + ++ G + +
Sbjct: 666 KVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725
Query: 417 IYDYLIVALCQ 427
+ + ++ L Q
Sbjct: 726 MLNSIVRKLLQ 736
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+ K + VG +P V+ N L+NG K++ ++ ++ EM G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ + I E G +L TYN ++ CK ++A ++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++ + T+ ++ L K G+ EA LF + GL PD+ +Y+ + ++
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G ++E L M NG ++ IV+ + G + A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 9/248 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y ++ K A K+L +V SV + D ++ N Y
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMV--------SVGMKPDCVTYNTLIN-GYC 560
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + ++ FR+ G P I++ N +L GL + ++Y + G
Sbjct: 561 KISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELS 620
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NI+ H CKN D+ + + + T+N +I + K GR ++A L+ +
Sbjct: 621 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++PD+ TY+ + L ++G + E LF M G + + N+++ + G +
Sbjct: 681 SANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDI 740
Query: 362 QESKSLLY 369
+ + L+
Sbjct: 741 TRAGTYLF 748
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/524 (29%), Positives = 243/524 (46%), Gaps = 12/524 (2%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
LG +SRVL+ + D AL FF W K T+ +YCL+VHIL + + A L
Sbjct: 93 LGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFL 152
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWAY----------VKVGLIRESFKTFRKTLDV 199
EL+ + P DVF+ L S C + +++G++ E+ + F +
Sbjct: 153 KELISSRRILP-GFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRF 211
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
P SCN L L K D + + +M GI + T+NI+ CK GD+
Sbjct: 212 RVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTA 271
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++++ G PD+VTYN+LI Y K G L+++F L+ M PD++TY L+N
Sbjct: 272 KSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINC 331
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK ++ +A H M + GL P++V+Y+TLI A CKE +Q++ L +M G+ P+
Sbjct: 332 FCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPN 391
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
FT ++ K G L AL L E+ + V + Y L+ LC++ R A L
Sbjct: 392 EFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFR 451
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P+L+ Y L+ K V +AL L E+ ++ IKP L Y +I C
Sbjct: 452 AMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQN 511
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ E +M EM G+ +S I + ++ Y +A LL ++
Sbjct: 512 KLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFC 571
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT-CKYMIHSLWK 602
+ + + G + + ++ R PNN+ C +I L K
Sbjct: 572 VLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 188/423 (44%), Gaps = 71/423 (16%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+GL+ ESF F + DVG +P +++ N L+N K + + + EM G+ P
Sbjct: 296 GYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKP 355
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L CK + + FL + G P+ TY +LI + CK G L+DA L
Sbjct: 356 NVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLA 415
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP--------------- 343
M + V ++VTYTTL++GLCKEG++ EA LF M+ G++P
Sbjct: 416 DEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKN 475
Query: 344 --------------------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
D++ Y T+I+ C + K++E + ++ EM GI ++
Sbjct: 476 KRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIY 535
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I + Y K G+ + ALNL+ E+ GV ++ + LI LC+ A R+
Sbjct: 536 TIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMAD 595
Query: 444 DGYVPS-LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI---------- 492
P+ + + L++ LCK + + A L DEM D+N+ P Y ALI
Sbjct: 596 FNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQ 655
Query: 493 ----------------------CCFCGIGRSG---EAVSLMDEMLESGMLPDSQICRVLI 527
G+ + +A ++EM+ G++PD +C L+
Sbjct: 656 EALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLL 715
Query: 528 NGY 530
Y
Sbjct: 716 RKY 718
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 168/407 (41%), Gaps = 46/407 (11%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F + +KN +KP Y ++ L + A+K L ++ V P+ +
Sbjct: 341 AFHFLHEMKNS-GLKPNVVTYSTLIDALCKEHMLQQAIKFLLDM-RRVGLSPNEF-TYTS 397
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A K G + ++ K + L V ++V+ LL+GL K + + ++
Sbjct: 398 LID-------ANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLF 450
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI------ 282
M + G+ PN T+ L H KN V+ L++I+E+ PDL+ Y T+I
Sbjct: 451 RAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQ 510
Query: 283 -----------------------------SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
+Y K G+ +A L + M V +VT+
Sbjct: 511 NKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTF 570
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT-LIFAYCKEGKMQESKSLLYEMM 372
L++GLCK+G V EA F RM L P+ V+ T LI CK ++ +K L EM
Sbjct: 571 CVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQ 630
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ PD ++ G K ALN+ + G+ + Y L+ L Q N
Sbjct: 631 DKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQ 690
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
A L + G VP + L+ + S+ +A+ L DE++ +
Sbjct: 691 QARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 213/422 (50%), Gaps = 1/422 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+ K F + LD G P+ L+NG K + + ++ + +G+ P
Sbjct: 552 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLP 611
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T + H KNG V + +++E+G PD+ TY++LIS +CK+G + AF L+
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P++ Y L++GLCK G ++ A +LF M +GL PD V+Y+T+I YCK
Sbjct: 672 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ SL +EM G+ P +F +V G KEG + A+NL E+ + G + + +
Sbjct: 732 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-F 790
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ + A+ L + + +P Y +++ CK + +A LL EM +
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 850
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ TY +L+ + +G+S E +L ++M+ G+ PD ++I +C E ++ +
Sbjct: 851 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 910
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K + ++ + + DL++ +L LG P+ C ++
Sbjct: 911 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVR 970
Query: 599 SL 600
S
Sbjct: 971 SF 972
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 203/417 (48%), Gaps = 35/417 (8%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ V D+ +C+ + +K G ++E+ K F + + G P + + + L++G K
Sbjct: 605 HALGVLPDVQTCSAFIH-GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+++ +++++EM GI PN +N L CK+GD+ + + + E+G +PD VTY+T
Sbjct: 664 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 723
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG---------------- 324
+I YCK + +AF L+ M + V P Y L++G CKEG
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Query: 325 ------------------KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
K++EA QLF M+ + + PD V+Y T+I +CK GKM+E+
Sbjct: 784 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L EM + DT T ++ GY K G+ L ++ GV Y +I A C
Sbjct: 844 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+++ A L + + G + I++ L+ +LCK + + +A L DEM + +KPSL+
Sbjct: 904 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L+ F G+ EA + + + G++PD+ L+NG + D A L+
Sbjct: 964 ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 1020
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 208/486 (42%), Gaps = 75/486 (15%)
Query: 177 NWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ + GL R E+ TF + G +P +C+ L++G ++ ID+ ++ + M
Sbjct: 300 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 359
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
GI N T+N+L H CK G ++K L+ + G P+ T+ LI YC++ +
Sbjct: 360 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNM 419
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLC------------------------------ 321
A L M +RN++P V+Y ++NGLC
Sbjct: 420 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSIL 479
Query: 322 -----KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
EG++ EA +L M G++PDI YN +I K GKM+E+ + L E+ G G+
Sbjct: 480 IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539
Query: 377 YPDTFTCQIIVQGYGKEGR-----------------------------------LLSALN 401
PD T + GY K G+ L+ AL+
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ L GV I L ++ R A + + + G VP + Y+ L+ C
Sbjct: 600 IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 659
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V A L DEM + I P++ Y AL+ C G A L D M E G+ PDS
Sbjct: 660 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 719
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+I+GYC ++V +A +L K + YNA+ + ++GD+ K M L +
Sbjct: 720 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 779
Query: 582 LRLGFA 587
L+ GFA
Sbjct: 780 LQKGFA 785
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 140/582 (24%), Positives = 248/582 (42%), Gaps = 64/582 (10%)
Query: 78 LLQNDLKPLL------PHLGAHEISRVLLRCQ-SDSVSALTFFNWVKNDLEIKPTSSNYC 130
L QN+ K ++ L I VL + Q D L FF W ++ + + ++
Sbjct: 51 LKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFS 110
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD---------------VFQDLISCTED 175
++ L + F A +L +++ +D VF LI
Sbjct: 111 ILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVVFDILID---- 166
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
+Y ++G++ E+ F + S++ CN LL LLK ++ W+VY M
Sbjct: 167 ---SYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAK 223
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ + +T+ L CK GD+ L +++E+G +P+ Y+ +I C+ G +++A
Sbjct: 224 MGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAV 283
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD----------- 344
L R M + ++P+ TYT + GLC+ ++ EA F M GL PD
Sbjct: 284 ELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 343
Query: 345 ------------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
+++YN LI CK GKM+++ +L M+ G P++
Sbjct: 344 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNS 403
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++++GY +E + AL L+ E+++ + S Y +I LC A LLE+
Sbjct: 404 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 463
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G P++ +Y+ L+ + + +A L D M + P + Y A+I C G+
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA + + E+ G+ PD+ I GY + +A + + Y
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + G+L + + + +R LG P+ TC IH L K
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 185/395 (46%), Gaps = 1/395 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS VS ++NGL + ++ E+M G+ PN ++IL + G +++
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G PD+ YN +IS K G++ +A + R + PD VT+ + G K
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 555
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK+ EA + F M+ GL P+ Y LI + K G + E+ S+ + G+ PD T
Sbjct: 556 TGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQT 615
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C + G K GR+ AL + EL+ G+ Y LI C+ A L + +
Sbjct: 616 CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMC 675
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P++ IYN L++ LCK + A L D M ++ ++P TY +I +C
Sbjct: 676 LKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 735
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA SL EM G+ P S + L++G C E D+ KA L +K T S+N +
Sbjct: 736 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFATTLSFNTLI 794
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + + + +L + + P+++T +I
Sbjct: 795 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 215/466 (46%), Gaps = 18/466 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAY 180
KP S +CL++ + A+++L E+ + LV + L C +D + A
Sbjct: 400 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC-KDLSLAN 458
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K K G +P++V + L+ I++ ++ + M G+ P+
Sbjct: 459 ----------KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDI 508
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N + K G +++ + +L +I+ G PD VT+ I Y K G++ +A +
Sbjct: 509 FCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 568
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M ++P+ YT L+NG K G + EA +F R+ G+ PD+ + + I K G+
Sbjct: 569 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+QE+ + E+ G+ PD FT ++ G+ K+G + A L E+ G++ + IY+
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ A L + + + G P Y+ +++ CK ++VA+A L EM +
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P Y AL+ C G +A++L EML+ G LI+GYC + +A
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQEAS 807
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK----LMELQKRFL 582
L K + D +Y V + + G + + E+Q+R L
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 208/433 (48%), Gaps = 2/433 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G +R + + + + G P+ + ++ G+ ++ ID+ ++ MG G+ P
Sbjct: 237 ALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVP 296
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT+T+ I+T C+ +++ E++++ G PD + LI + ++G +++ +
Sbjct: 297 NTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIK 356
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M + +L+TY L++GLCK GK+ +A ++ MV G P+ ++ LI YC+E
Sbjct: 357 DVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCRE 416
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M + LL EM + P + ++ G L A L+ ++ G+ + +Y
Sbjct: 417 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 476
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI+A + R A LL+ + G P + YN ++ L K + +A E+
Sbjct: 477 SILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 536
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R +KP T+ A I + G+ EA DEML+ G++P++ + VLING+ ++ +
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ + D ++ +A + ++G + + +++ G P+ T +I
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656
Query: 599 SLWKG--MERKFQ 609
K +E+ F+
Sbjct: 657 GFCKQGEVEKAFE 669
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 78/160 (48%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y K+G E F F K + G +P V+ ++ K + + + +++ +E+ G+
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
++L CK D+ + + L+++ E G P L NTL+ S+ + G++++A +
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ + ++PD T L+NG + +A L ++V
Sbjct: 985 FEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 228/438 (52%), Gaps = 1/438 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+L++C N + ++GLI +F F K L +G+ P ++ L+ GL I Q +
Sbjct: 119 NLVNCNILIN-CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLF 177
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++++ +G + ++ L H CK G+ L++++ P++V YNT+I S CK
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+N+AF L+ M + + PD+VTY+ L++G C GK+ +A LF++M+ + PD+ +
Sbjct: 238 VKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT 297
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N L+ A+CK+GKM+E K++ MM GI P+ T ++ GY + A ++ +
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ GV+ Y +I C+ + A +L + + + +P + Y+ L++ L K ++
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
AL L D+M DR + P++ TY +++ C I + +A++L+ ++ + G+ P+ +LI
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C + A + K + ++Y + F +G ++ + L + G
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 588 PNNLTCKYMIHSLWKGME 605
P+ T + +I SL+K E
Sbjct: 538 PDAKTYEIIILSLFKKDE 555
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 198/362 (54%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + ++ QP++V N +++ + K+ +++ + ++ EM GI P+
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L FC G ++ K+ E PD+ T+N L++++CK G++ + ++ +M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + P+ VTY +LM+G C +V +A +F+ M G++PDI SY+ +I +CK K
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM I PD T ++ G K GR+ AL LV ++ GV + Y+ +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC+ ++ A +LL ++ G P++ Y+ L++ LC+ + DA + + ++ +
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
++ TY +I FC G EA++L+ +M ++G +PD++ ++I + + + AE
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561
Query: 542 LL 543
LL
Sbjct: 562 LL 563
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 192/417 (46%), Gaps = 4/417 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ F + L P N +L L+K + ++M GI PN NI
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC+ G + KI + G+ PD +T+ TLI C KG++ AF + +
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
D ++Y TL++GLCK G+ R A L R+ + P++V YNT+I + CK + E+
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIV 423
L EM+ GI PD T ++ G+ G+L A++L ++ +I D+Y + L+
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM--ILENIKPDVYTFNILVN 303
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C+D + ++ + + + G P+ YN LM+ C V A + + M + P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ +Y +I FC I + EA++L EM ++PD LI+G ++ A L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +YN++ + + + K + L + G PN T +I L
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGL 480
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 184/384 (47%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D ++ + R P FN + K+ V +K+E G P+LV
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N LI+ +C+ G + AF ++ + + +PD +T+TTL+ GLC +G++++A ++V
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G D +SY TLI CK G+ + + LL + GN + P+ I+ K +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +L E+ G+S Y LI C + A L ++ + P + +N L+
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ CK + + + D M+ + IKP+ TY +L+ +C + +A S+ + M + G+ P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D Q ++ING+C K ++A L +K I D +Y+++ + ++ G +S ++L
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ G P T ++ +L K
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCK 447
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 174/364 (47%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +++ + F N DVD ++ P +N ++ S K + YL
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R + P+LV L+N C+ G + A +F +++ G PD +++ TLI C +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++Q++ +++ G + D + ++ G K G +AL+L+ + V + +Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I ++C+ A L + G P + Y+ L+ C + DA+ L ++M+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
NIKP + T+ L+ FC G+ E ++ D M++ G+ P+ L++GYC+ K+VNK
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+++ A+ D +SY+ + N F + + M L K R P+ +T +I
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 599 SLWK 602
L K
Sbjct: 409 GLSK 412
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 213/408 (52%), Gaps = 7/408 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L +N+ A+++L + + DCP V + +I+ + K
Sbjct: 160 PNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVIN-------GFFKE 212
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +++ T+ + LD G P++V+ + ++ L K +D+ +V M + G+ PN T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H +C +G + GFL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++ TY TL+ G +G + E H L MV G+ P+ ++ LI AY K+GK+ +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ PDT T ++ K GR+ A+ ++ +S +Y+ LI
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+LC ++ A L+ + G +N +++S CK V ++ L D MV +KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ TY LI +C G+ EA L+ M+ GM PD LINGYC
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 211/472 (44%), Gaps = 47/472 (9%)
Query: 84 KPLLPHLGAHE-ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
+ +LP++ + I L + Q+ + + VKN + P Y IVH + +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG--VMPNCRTYNSIVHGYCSSGQP 285
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+ L ++ HS V D+++ ++ K G E+ K F G +
Sbjct: 286 KEAIGFLKKM--------HSDGVEPDVVTYNSLMDY-LCKNGRCTEARKMFDSMTKRGLK 336
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I + LL G + + + + M R GI PN + F+IL + K G VD+
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
K+ ++G +PD VTY T+I CK GR+ DA + M + P + Y +L++ LC
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
KEG+V E+ +LF MV G+ PDI++
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+TLI YC GKM E+ LL M+ G+ PD T ++ GY K R+ AL L E++
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
GVS Y+ ++ L Q R AA L I + G L YN ++ LCK +
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+AL + + +++ T+ +I +GR+ EA L + +G++PD
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 214/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ +C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH--------- 277
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ N L++ L K + ++++ M + G+
Sbjct: 278 --GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G P+ ++ LI +Y K+G+++ A
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + PD VTY T++ LCK G+V +A + F +M+ LSP + YN+LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K ++K L+ EM+ GI DT I+ + KEGR++ + L + R GV
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C + AT LL + G P YN L+ CK + DAL+L EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + +L G P+ T M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 597 IHSL 600
+L
Sbjct: 696 AENL 699
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 6/379 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + PN T+ IL C G +D L + ++GF D + + ++
Sbjct: 76 YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--L 341
C R +DA + R M + +P++ +Y L+ GLC + + +EA +L M G
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+VSY T+I + KEG + ++ +EM+ GI P+ T I+ K + A+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K +A + D M R +KP ++TY L+ + G E L+D M+ +G+ P+
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ +LI Y + V++A + ++ DT +Y V + + G + M ++
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ +P N+ +IHSL
Sbjct: 436 IDERLSPGNIVYNSLIHSL 454
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 207/455 (45%), Gaps = 49/455 (10%)
Query: 197 LDVGFQP--SIVSCNFLLNG-----LLKLNCIDQCWQ-----VYEEMGRIGICPNTHTFN 244
LD+GF +++ F+++ +LK C D+ V M ++G PN ++N
Sbjct: 107 LDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYN 166
Query: 245 ILTHVFC-------------------------------------KNGDVDKVNGFLEKIE 267
IL C K GD+DK G ++
Sbjct: 167 ILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEML 226
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+ G P++VTY+++I++ CK ++ A + M + V+P+ TY ++++G C G+ +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPK 286
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ P+ T ++
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
QGY +G L+ L+ + R G+ + ++ LI A + + A + ++ Q G
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P Y ++ LCK V DA+ ++M+D + P Y +LI C + +A L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ EML+ G+ D+ +I+ +C E V ++E L + D +Y+ + + +
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + + +L + +G P+ +T +I+ K
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 177/380 (46%), Gaps = 23/380 (6%)
Query: 57 NPNKIV--DLICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+PN V LIC+ K+G +L Q L P G + + + C+S V
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG----TVIGILCKSGRVE 426
Query: 109 -ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A+ +F + D + P + Y ++H L +K+ A +++ E+++ C ++ F
Sbjct: 427 DAMRYFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTI-FFN 483
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I ++ K G + ES K F + +G +P I++ + L++G +D+ ++
Sbjct: 484 SIID-------SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M +G+ P+ T+N L + +CK ++ ++E G PD++TYN ++ +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R A LY + +L TY +++GLCK EA ++F + L + +
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N +I A K G+ E+K L + NG+ PD T ++ + ++G L +L + ++
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716
Query: 408 RFGVSISRDIYDYLIVALCQ 427
G + + + + ++ L Q
Sbjct: 717 ENGCTANSRMLNSIVRKLLQ 736
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+ K + VG +P V+ N L+NG K++ ++ ++ EM G+ P
Sbjct: 523 GYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ + I E G +L TYN ++ CK ++A ++
Sbjct: 583 DIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMF 642
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++ + T+ ++ L K G+ EA LF + GL PD+ +Y+ + ++
Sbjct: 643 QNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 702
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G ++E L M NG ++ IV+ + G + A
Sbjct: 703 GLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+ +KP Y ++ K A K+L +V SV + D ++ N
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV--------SVGMKPDCVTYNTLIN-G 558
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+ + ++ FR+ G P I++ N +L GL + ++Y + G
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+NI+ H CKN D+ + + + T+N +I + K GR ++A L+
Sbjct: 619 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ ++PD+ TY+ + L ++G + E LF M G + + N+++ + G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Query: 360 KMQESKSLLY 369
+ + + L+
Sbjct: 739 DITRAGTYLF 748
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 227/493 (46%), Gaps = 53/493 (10%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
CP +V F L++ + G + ++ + ++ G QP V+ ++NG+ KL
Sbjct: 6 CPANVVTFTTLMN-------GLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKL 58
Query: 219 N-------------------------------CID----QCWQVYEEMGRIGICPNTHTF 243
C D + ++ EM GI PN T+
Sbjct: 59 GDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTY 118
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + +C G L + E DPD+VT++ LI+++ K+G+++ A LYR M R
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI----------- 352
RN+ P +TY+++++G CK ++ +A +F MV +G SPDI++ NTLI
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLI 238
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+C+ G + ++ L EM+ NG+ PD TC ++ G + G+L AL + Q+ +
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ + +I +C+ N+ A L + +G + YN L+ K + A +
Sbjct: 299 LDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM+ + I PS TY +++ FC R EA ++D M+ G PD LI GYC
Sbjct: 359 YLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCK 418
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
V+ L ++ + DT +YNA+ + F + GDL+ ++ + + G P+ +T
Sbjct: 419 AGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTIT 478
Query: 593 CKYMIHSLWKGME 605
+ M+ L E
Sbjct: 479 FRSMLAGLCTKAE 491
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 213/453 (47%), Gaps = 25/453 (5%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL + ++ +IK Y IV L + A + E+ H
Sbjct: 59 GDTVSALNMLRKM-DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEM--------HEK 109
Query: 164 DVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+F ++++ C D Y G ++ + R ++ P +V+ + L+N +K +
Sbjct: 110 GIFPNVLTYNCMID---GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKV 166
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++Y EM R I P T T++ + FCK+ ++ + + +G PD++T NTL
Sbjct: 167 SGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTL 226
Query: 282 ISS-----------YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
I +C+ G +N A L++ M V PD+VT TL+ GLC+ GK+ +A
Sbjct: 227 IDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKAL 286
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++F + D + N +I CK K+ E+ L + NG+ D T I++ +
Sbjct: 287 EMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVF 346
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
KEG L A ++ +E+ G+ S Y+ ++ C+ NR A +++ + +G P +
Sbjct: 347 VKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDV 406
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
++ L++ CK V D L L EM R + TY ALI FC +G A + +E
Sbjct: 407 VTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
M+ SG+ PD+ R ++ G C + ++ K +L
Sbjct: 467 MVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 182/406 (44%), Gaps = 24/406 (5%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
++ G ++V+ L+NGL + + Q + + M G P+ T+ + + CK GD
Sbjct: 2 VETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDT 61
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
L K++E ++V Y+ ++ CK G A ++ M+ + + P+++TY +
Sbjct: 62 VSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCM 121
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++G C GK +A QL M+ R + PD+V+++ LI A+ KEGK+ ++ L EM+ I
Sbjct: 122 IDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNI 181
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+P T T ++ G+ K RL A ++ + G S + LI C+ R
Sbjct: 182 FPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKR------ 235
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L+ C+ +V A L EM+ + P + T L+ C
Sbjct: 236 ------------------HLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC 277
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ +A+ + +S M D+ C ++ING C V++A L D
Sbjct: 278 ENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVV 337
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN + +F ++G+ + ++ L G P+ +T M+ K
Sbjct: 338 TYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCK 383
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 11/276 (3%)
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
MV G ++V++ TL+ C+EG++ ++ +L+ M+ G PD T IV G K G
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+SALN++ ++ + + IY ++ LC+D A ++ + + G P++ YN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ C +DA L +M++RNI P + T+ ALI F G+ A L EML
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN-----------M 564
+ P + +I+G+C + A+ + K D + N + +
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F + G+++ +L + + G +P+ +TC ++ L
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGL 276
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 214/413 (51%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
SF K L +G++P++++ L+ GL I Q Q ++++ +G N ++ L +
Sbjct: 126 SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLIN 185
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G L +++ + P++V YNT+I S CK +N+AF LY M + + P
Sbjct: 186 GLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+VTY L++G C GK+++A LF++M+ ++P++ ++N L+ +CKE +++E+K++L
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
MM GI PD FT ++ Y + A ++ + + GV+ + Y +I C+
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A +L + + + +P + YN L++ LCK ++ AL L DEM DR + TY
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+++ C + +A++L+ +M + G+ PD L++G C + A +
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV 485
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
K I D Y A+ F G + ++L + G PN +T + +I SL+
Sbjct: 486 KGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLF 538
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 199/362 (54%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + + R+ QP++V N +++ + K+ +++ + +Y EM GI P+
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FC G + K+ E +P++ T+N L+ +CK+ RL +A + +M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + PD+ TY +LM+ C +V +A +F+ + RG++P+I SY+ +I +CK K+
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM N I PD T ++ G K G++ AL LV E+ GV + Y+ +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC++++ A +LL ++ +G P + Y L++ LCK + DA ++ ++++ +
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
++ Y A+I FC G E++ L+ +M E+G +P++ ++I + + +KAE
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEK 548
Query: 542 LL 543
LL
Sbjct: 549 LL 550
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 170/336 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KV L+ E+F + + + G P +V+ N L++G + + ++ +M I PN +
Sbjct: 224 KVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVY 283
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL FCK + + L + ++G PD+ TYN+L+ YC +N A +++ +
Sbjct: 284 TFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI 343
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R V P++ +Y+ +++G CK KV EA LF M + PD+V+YN+LI CK GK+
Sbjct: 344 SQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKI 403
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ EM G+ D T I+ K ++ A+ L+ +++ G+ Y L
Sbjct: 404 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTL 463
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++ R A + E + GY+ + IY +++ C ++L L +M +
Sbjct: 464 VDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGC 523
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ TY +IC + +A L+ EM+ G+
Sbjct: 524 IPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 195/401 (48%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PSI +L L+K N ++ +M GI + +IL + F + G
Sbjct: 69 KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L KI + G++P+++T TLI C KG+++ A + + + V+Y TL+NGLC
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K G+ A QL R+ + + P++V YNT+I + CK + E+ L EM+ GI PD
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ G+ G++ A +L ++ ++ + ++ L+ C++ R A ++L +
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G P + YN LM+ C V A + + + R + P++ +Y +I FC I +
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EA++L EM + ++PD LI+G C ++ A L+ + +D +YN++
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ ++ + K + L + G P+ T ++ L K
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 153/304 (50%)
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R+++++N P + + ++ L K L +M G++ D+V + LI + +
Sbjct: 61 RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ S S+L +++ G P+ T +++G +G++ AL ++ G +++ Y
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSY 180
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ + AA LL R+ P++ +YN +++S+CK V +A L EMV
Sbjct: 181 GTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS 240
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ I P + TY ALI FC +G+ +A L ++M+ + P+ +L++G+C E+ + +
Sbjct: 241 KGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKE 300
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ +L K+ D +YN++ + + +++K + + G PN + MIH
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIH 360
Query: 599 SLWK 602
K
Sbjct: 361 GFCK 364
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+ + E+ F++ P +V+ N L++GL KL I ++ +EM G+
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + CKN VDK L K+++EG PD+ TY TL+ CK GRL DA ++
Sbjct: 421 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVF 480
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + D+ YT ++ G C G E+ L +M G P+ V+Y +I + +
Sbjct: 481 EDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDK 540
Query: 359 GKMQESKSLLYEMMGNGIY 377
+ +++ LL EM+ G++
Sbjct: 541 DENDKAEKLLREMITRGLF 559
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
DN+ +S + Q PS+ + +++ SL K + + + L +M I L
Sbjct: 50 DNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVI 109
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA------EA 541
LI CF +G++ + S++ ++L+ G P+ LI G C++ +++A
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LGF K SY + N + G S ++L +R PN + +I S+
Sbjct: 170 ALGFHLNKV------SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC 223
Query: 602 K 602
K
Sbjct: 224 K 224
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 254/542 (46%), Gaps = 21/542 (3%)
Query: 69 LKKGDSHLTLLQND-LKPLLPHLGAHEISRVLLRCQ-SDSVSALTFFNWVKNDLEIKPTS 126
LK+ D + L D ++ L P + + VL + + DSV FF W + +
Sbjct: 65 LKRKDWQILLNNEDNVRKLNPEI----VCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYL 120
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV--- 183
+Y ++ L + A ML +L++ K +++ L+ C + + + V
Sbjct: 121 HSYSILAIRLCNSGLIHQADNMLEKLLQTRKP---PLEILDSLVRCYREFGGSNLTVFDI 177
Query: 184 --------GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
G + E+ F ++ GF P+++ CN L+ LLK N + W+VY M
Sbjct: 178 FIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAK 237
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
I P+ +T+ + CK GDV K L ++E+E P+L TYN I C+ G +++A
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEAL 296
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ ++M + + PD TYT L++G CK+ + +EA +F M GL+P+ +Y LI +
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
KEG ++E+ + EM+ G+ + T ++ G K G + A++L E+ G+
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI + + A LL + PS Y+ L+ LC + A + D+
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ +KP++ Y LI + R A+ L+ M+ +G+LPD LI G C K
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V +A+ LL +K + +Y A N++++ G++ K L G PNN+
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 596 MI 597
+I
Sbjct: 597 LI 598
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 231/474 (48%), Gaps = 13/474 (2%)
Query: 130 CLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
CLI+ L K A +L ++ E +K H+ F +L Y K G I+
Sbjct: 526 CLIIG-LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL----------YSKSGEIQV 574
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + F+ L G P+ V L+ G + + ++ M G+ P+ ++ + H
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIH 634
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
KNG + G K + G PD+ YN+LIS +CK+G + A LY M + P
Sbjct: 635 SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINP 694
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++V Y TL+NGLCK G+V +A +LF + + L PD+V+Y+T+I YCK G + E+ L
Sbjct: 695 NIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLF 754
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+ GI PD + I++ G GKEG L AL+L E Q+ V S ++ LI + C+
Sbjct: 755 DEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKH 813
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A L + + P++ Y L+++ K + + +A L +M RNI P+ TY
Sbjct: 814 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 873
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+L+ + IG + +SL +M G+ D+ V+ + YC E +A LL
Sbjct: 874 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 933
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + ++A+ ++ +S ++EL + + ++ TC ++ +K
Sbjct: 934 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYK 987
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 201/391 (51%), Gaps = 6/391 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P++ + N + GL + +D+ +V + M G+ P+ HT+ +L FCK +
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
E + G +P+ TY LI + K+G + +A + M R + ++VTY ++ G+
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K G++ +A LF+ M+ GL PD +YN LI Y K M ++ LL EM + P F
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T +++ G L A ++ ++ R GV + +Y LI A Q++R A LL+ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+G +P L YN L+ LC+ V +A +L +M ++ IKP+ TY A I + G
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV-NKAEALLGF--FAKKFQIYDTESY 558
A +ML SG++P++ I +LI G+C DV N EAL F +K I D +Y
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHC---DVGNTVEALSTFKCMLEKGLIPDIRAY 629
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+A+ + +++G + M + +FL+ G P+
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 216/458 (47%), Gaps = 36/458 (7%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + ++ F + L G +P + N L++G LK + + + ++ EM + P+
Sbjct: 392 AKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSP 451
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+++L C + D+ K N L+++ G P++ Y TLI +Y ++ R A L +I
Sbjct: 452 FTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M VLPDL Y L+ GLC+ KV EA L M +G+ P+ +Y I Y K G+
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571
Query: 361 MQESKSLLYEMMGNGIYPD----------------------TFTCQI------------- 385
+Q ++ +M+ +GI P+ TF C +
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
I+ K G+ A+ + ++ + GV +Y+ LI C++ A+ L + + +G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P++ +YN L+ LCK V A L DE+ ++++ P + TY +I +C G EA
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L DEM+ G+ PD I +LI+G E ++ KA +L A++ + ++N++ + F
Sbjct: 752 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF-HEAQQKSVGSLSAFNSLIDSF 810
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ G + + EL + PN +T +I + K
Sbjct: 811 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 848
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 197/411 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G I E+ + + + G + ++V+ N ++ G+ K + + ++ EM G+ P
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+N+L + K+ D+ K L +++ P TY+ LIS C L A +
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R V P++ Y TL+ +E + A +L M+ G+ PD+ YN LI C+
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRA 534
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K++E+K LL +M GI P+ T + Y K G + A ++ G+ + IY
Sbjct: 535 KKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY 594
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C A S + + + G +P + Y+ ++ SL K +A+ + + +
Sbjct: 595 TILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLK 654
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P + Y +LI FC G +A L DEML +G+ P+ + LING C +V K
Sbjct: 655 TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTK 714
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L +K + D +Y+ + + + + G+L++ +L + G +P+
Sbjct: 715 ARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 174/373 (46%), Gaps = 34/373 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +E+ F K L G P + N L++G K I++ Q+Y+EM GI PN
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L + CK G+V K ++IEE+ PD+VTY+T+I YCK G L +AF L+ M
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757
Query: 302 YRRNVLPD----------------------------------LVTYTTLMNGLCKEGKVR 327
+ + PD L + +L++ CK GKV
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVI 817
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +LF MV + L+P+IV+Y LI AY K M+E++ L +M I P+T T ++
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLL 877
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
Y + G ++L +++ G++ Y + A C++ + A LL + +G
Sbjct: 878 LSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIK 937
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
++++ L+ LCK ++ L L EM + S T L+ F G EA +
Sbjct: 938 LEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKV 997
Query: 508 MDEMLESGMLPDS 520
+ M G +P S
Sbjct: 998 LGVMQRLGWVPTS 1010
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 197/409 (48%), Gaps = 1/409 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+ + + + + G P + N L+ GL + +++ + +MG GI P
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N HT+ +++ K+G++ + + + G P+ V Y LI +C G +A +
Sbjct: 555 NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + ++PD+ Y+ +++ L K GK +EA +F + + G+ PD+ YN+LI +CKE
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++++ L EM+ NGI P+ ++ G K G + A L E++ + Y
Sbjct: 675 GDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTY 734
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I C+ A L + + G P IY L++ K ++ AL L E
Sbjct: 735 STIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQ 794
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++ SLS + +LI FC G+ EA L D+M++ + P+ +LI+ Y + + +
Sbjct: 795 KSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
AE L + I +T +Y ++ + + G+ K++ L K G A
Sbjct: 854 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIA 902
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 212/408 (51%), Gaps = 7/408 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L N+ A+++L + + DCP V + +I+ + K
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVIN-------GFFKE 212
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +++ T+ + LD G P++V+ + ++ L K +D+ +V M + G+ PN T+
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H +C +G + GFL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++ TY TL+ G +G + E H L MV G+ P+ ++ LI AY K+GK+ +
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ PDT T ++ K GR+ A+ ++ +S +Y+ LI
Sbjct: 393 AMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+LC ++ A L+ + G +N +++S CK V ++ L D MV +KP
Sbjct: 453 SLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 512
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ TY LI +C G+ EA L+ M+ GM PD LINGYC
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC 560
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 211/472 (44%), Gaps = 47/472 (9%)
Query: 84 KPLLPHLGAHE-ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
+ +LP++ + I L + Q+ + + VKN + P Y IVH + +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG--VMPNCRTYNSIVHGYCSSGQP 285
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+ L ++ HS V D+++ ++ K G E+ K F G +
Sbjct: 286 KEAIGFLKKM--------HSDGVEPDVVTYNSLMDY-LCKNGRCTEARKMFDSMTKRGLK 336
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I + LL G + + + + M R GI PN + F+IL + K G VD+
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
K+ ++G +PD VTY T+I CK GR+ DA + M + P + Y +L++ LC
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
KEG+V E+ +LF MV G+ PDI++
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+TLI YC GKM E+ LL M+ G+ PD T ++ GY K R+ AL L E++
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREME 576
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
GVS Y+ ++ L Q R AA L I + G L YN ++ LCK +
Sbjct: 577 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTD 636
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+AL + + +++ T+ +I +GR+ EA L + +G++PD
Sbjct: 637 EALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 180/379 (47%), Gaps = 6/379 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + PN T+ IL C G +D L + ++GF D + + L+
Sbjct: 76 YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--L 341
C R +DA + R M + +P++ +Y L+ GLC E + +EA +L M G
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+VSY T+I + KEG + ++ +EM+ GI P+ T I+ K + A+
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ LC
Sbjct: 256 VLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLC 315
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K +A + D M R +KP ++TY L+ + G E L+D M+ +G+ P+
Sbjct: 316 KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 375
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ +LI Y + V++A + ++ DT +Y V + + G + M ++
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ +P N+ +IHSL
Sbjct: 436 IDERLSPGNIVYNSLIHSL 454
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 205/462 (44%), Gaps = 46/462 (9%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGIC 237
G + F + GF+ ++ LL GL C D+ V M ++G
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTQLGCI 159
Query: 238 PNTHTFNILTHVFC-------------------------------------KNGDVDKVN 260
PN ++NIL C K GD+DK
Sbjct: 160 PNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAY 219
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
G ++ + G P++VTY+++I++ CK ++ A + M + V+P+ TY ++++G
Sbjct: 220 GTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGY 279
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G+ +EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ P+
Sbjct: 280 CSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEI 339
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++QGY +G L+ L+ + R G+ + ++ LI A + + A + +
Sbjct: 340 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSK 399
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ Q G P Y ++ LCK V DA+ ++M+D + P Y +LI C +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A L+ EML+ G+ D+ +I+ +C E V ++E L + D +Y+
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G + + +L + +G P+ +T +I+ K
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 214/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ +C +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH--------- 277
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ N L++ L K + ++++ M + G+
Sbjct: 278 --GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G P+ ++ LI +Y K+G+++ A
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + PD VTY T++ LCK G+V +A + F +M+ LSP + YN+LI + C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K ++K L+ EM+ GI DT I+ + KEGR++ + L + R GV
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C + AT LL + G P YN L+ CK + DAL+L EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLT 635
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + +L G P+ T M
Sbjct: 636 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 695
Query: 597 IHSL 600
+L
Sbjct: 696 AENL 699
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 177/380 (46%), Gaps = 23/380 (6%)
Query: 57 NPNKIV--DLICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+PN V LIC+ K+G +L Q L P G + + + C+S V
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYG----TVIGILCKSGRVE 426
Query: 109 -ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A+ +F + D + P + Y ++H L +K+ A +++ E+++ C ++ F
Sbjct: 427 DAMRYFEQMI-DERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDR-GICLDTI-FFN 483
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I ++ K G + ES K F + +G +P I++ + L++G +D+ ++
Sbjct: 484 SIID-------SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 536
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M +G+ P+ T+N L + +CK ++ ++E G PD++TYN ++ +
Sbjct: 537 LASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQ 596
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R A LY + +L TY +++GLCK EA ++F + L + +
Sbjct: 597 TRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRT 656
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N +I A K G+ E+K L + NG+ PD T ++ + ++G L +L + ++
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716
Query: 408 RFGVSISRDIYDYLIVALCQ 427
G + + + + ++ L Q
Sbjct: 717 ENGCTANSRMLNSIVRKLLQ 736
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+ +KP Y ++ K A K+L +V SV + D ++ N
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV--------SVGMKPDCVTYNTLIN-G 558
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+ + ++ FR+ G P I++ N +L GL + ++Y + G
Sbjct: 559 YCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLE 618
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+NI+ H CKN D+ + + + T+N +I + K GR ++A L+
Sbjct: 619 LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ ++PD+ TY+ + L ++G + E LF M G + + N+++ + G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Query: 360 KMQESKSLLY 369
+ + + L+
Sbjct: 739 DITRAGTYLF 748
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 216/452 (47%), Gaps = 8/452 (1%)
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
LC ++L H+V LI+C N V + + FK +G QP +++
Sbjct: 115 LCNQMDLF-GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFK-------LGIQPDVITF 166
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L+NG+ I ++Y EM R G P+ ++N L + C +G+ + +K+E+
Sbjct: 167 TTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ 226
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P++VTYNT+I S CK +NDA M R + PD +TY ++++GLC G++ E
Sbjct: 227 NGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNE 286
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +LF RM G PD+V+YN +I + K+ + ++ L EM+ GI PD T I+
Sbjct: 287 ATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILH 346
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G G+L A+ L ++++ G Y+ +I +LC+D A L + G P
Sbjct: 347 GLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPP 406
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ Y+ ++ C + +A L EMV RN+ P+ T+ L+ C G EA +
Sbjct: 407 NAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVF 466
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+ M E G+ P+ L+NGYC+ +N+A + K D SYN + N +
Sbjct: 467 ETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNS 526
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ K L + PN +T ++ L
Sbjct: 527 RRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 210/419 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I+ + + + + + G +P ++S N L+NGL + V+++M + G PN T+
Sbjct: 177 GKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTY 236
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK+ V+ FL ++ G PD +TYN+++ C G+LN+A L++ M +
Sbjct: 237 NTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ 296
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD+VTY +++ L K+ V +A MV +G+ PD+V+Y T++ C G++ E
Sbjct: 297 NGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNE 356
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +M G PD I+ K+ + A+ + E+ G+ + Y ++
Sbjct: 357 AIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILH 416
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C + AT L + + +P+ ++ L++ LC+ V++A + + M ++ ++P
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP 476
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY AL+ +C + EA + + M+ G PD +LINGYC + ++KA+ALL
Sbjct: 477 NIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALL 536
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K +T +YN + G L EL K+ G P +T +++ L K
Sbjct: 537 TQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCK 595
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 226/484 (46%), Gaps = 9/484 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L I+P + +++ + K A+++ E+V H DV CN
Sbjct: 157 LGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR----SGHEPDVISYNTLINGLCN-- 210
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
G + F+K G +P++V+ N +++ L K ++ EM GI P+
Sbjct: 211 ---SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N + H C G +++ +++E+ G PD+VTYN +I S K +NDA
Sbjct: 268 AITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLS 327
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+VTYTT+++GLC G++ EA +LF +M +G PD+V+YNT+I + CK+
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ L EM+ GI P+ T I+ G+ G+L A L E+ V + +
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFS 447
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LCQ+ A + E + + G P++ YN LM C + +A + + MV +
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P L +Y LI +C R +A +L+ +M + P++ ++ G C + A
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L + +Y+ + N + G L + ++L K P+ + +I
Sbjct: 568 QELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEG 627
Query: 600 LWKG 603
++ G
Sbjct: 628 MFIG 631
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 205/439 (46%), Gaps = 35/439 (7%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ +F + + +PSIV L + K+ + +M G+ ++ NI
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + C+ VD K+ + G PD++T+ TLI+ C +G++ A LY M R
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+++Y TL+NGLC G A +F +M G P++V+YNT+I + CK+ + ++
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV-------------- 411
L EM+G GI PD T IV G G+L A L +++ G
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313
Query: 412 -------------------SISRDIYDYLIV--ALCQDNRPFAATSLLERIGQDGYVPSL 450
I D+ Y + LC + A L +++ Q G P +
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN +++SLCK V DA+ EMVDR I P+ TY ++ FC +G+ EA L E
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ ++P++ +L++G C E V++A + +K + +YNA+ N +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 571 LSKLMELQKRFLRLGFAPN 589
+++ ++ + + G AP+
Sbjct: 494 MNEARKVFEIMVGKGCAPD 512
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 201/418 (48%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+ ++ + + G P ++ N +++GL L +++ ++++ M + G P+ T+N
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYN 307
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I+ K+ V+ FL ++ ++G PD+VTY T++ C G+LN+A L++ M ++
Sbjct: 308 IIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+V Y T+++ LCK+ V +A + MV RG+ P+ V+Y+T++ +C G++ E+
Sbjct: 368 GCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEA 427
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
L EM+G + P+T T I+V G +EG + A + + GV + Y+ L+
Sbjct: 428 TQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNG 487
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C + A + E + G P L YN L+ C + A L +M + + P+
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPN 547
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY ++ C +GR +A L +M SGMLP +L+NG C +++A L
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFK 607
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K D Y + G L L + G P T MI L K
Sbjct: 608 SMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLK 665
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDC 176
D I P + Y I+H + A ++ E+V ++ + F L+ C E
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG--RNVMPNTLTFSILVDGLCQE-- 456
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
G++ E+ F + G +P+I + N L+NG +++ +V+E M G
Sbjct: 457 -------GMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC 509
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ H++NIL + +C + +DK L ++ + P+ VTYNT++ C GRL DA
Sbjct: 510 APDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQE 569
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L++ M +LP L+TY+ L+NGLCK G + EA +LF M + L PDI+ Y LI
Sbjct: 570 LFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF 629
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
GK++ +K L ++ +GI P T ++++G KEG
Sbjct: 630 IGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 44/357 (12%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D I P Y I+H L + + + A+++ ++ + K C V + +I
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ--KGCKPDVVAYNTIID------- 381
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K L+ ++ + + +D G P+ V+ + +L+G L +D+ Q+++EM + P
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT TF+IL C+ G V + E + E+G +P++ TYN L++ YC + ++N+A ++
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 299 RIMYRRNVLPDL-----------------------------------VTYTTLMNGLCKE 323
IM + PDL VTY T+M GLC
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYV 561
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G++ +A +LF +M G+ P +++Y+ L+ CK G + E+ L M + PD
Sbjct: 562 GRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILY 621
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
I+++G G+L A L +L G+ Y+ +I L ++ A L +
Sbjct: 622 TILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%)
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R+ + PS+ + + + S+ K + + L ++M + ++ + LI C C +
Sbjct: 83 RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLN 142
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
AVS+ +M + G+ PD LING C E + A L + D SYN
Sbjct: 143 HVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYN 202
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N G+ + + + K+ + G PN +T +I SL K
Sbjct: 203 TLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCK 245
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 202/409 (49%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
RK G ++ + N L+N LN ++ + V ++ ++G P+T +F L C
Sbjct: 98 RKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLE 157
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + + +K+ EGF PD+V Y TLI+ CK G + A L R M + N PD+V Y
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
TL++ LCK+ + +A LF M+ +G+SP+IV+ N+L++A C G+ + +LL EM+
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+ I P+ + +V KEG + A ++V + + GV Y LI C +
Sbjct: 278 SKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDE 337
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + + + G P++ YN L+ CK + + A+ L +EM + + P+ TY LI
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIH 397
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +GR +A++L EM+ G +PD R+L++ C ++KA ALL
Sbjct: 398 GLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDP 457
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D + Y V + G+L +L G PN T M H L K
Sbjct: 458 DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCK 506
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/484 (27%), Positives = 219/484 (45%), Gaps = 51/484 (10%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTL 197
N+ +FA +L ++++L C F LI C E G I E+ F K +
Sbjct: 123 NRVNFAFSVLAKILKL--GCQPDTASFTTLIKGLCLE---------GQIGEALHLFDKMI 171
Query: 198 DVGFQPSIVSCNFLLNGLLKLN-------------------------------CID---- 222
GFQP +V L+NGL K C D
Sbjct: 172 WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
Q + ++ EM GI PN T N L + C G+ VN L ++ + P+ ++ T++
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ CK+G + A + +M++ V PD+VTYT L++G C ++ EA ++F MVH+G +
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCA 351
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P++ SYNTLI YCK +M ++ L EM + P+T T ++ G GRL A+ L
Sbjct: 352 PNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIAL 411
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
E+ G Y L+ LC++ A +LL+ I P ++IY +++ +C+
Sbjct: 412 FREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCR 471
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ DA L + + +KP++ TY + C G EA L EM E+ D
Sbjct: 472 AGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCT 531
Query: 523 CRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTESYNAVFNMFAEDG-DLSKLMELQKR 580
+ G+ + ++A LL A+ F D + + M ++DG D S+ +L+
Sbjct: 532 YNTITQGFLRNNETSRAIQLLEEMLARGFSC-DVSTTTLLVGMLSDDGLDQSEAHKLEDM 590
Query: 581 FLRL 584
F L
Sbjct: 591 FPHL 594
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 201/480 (41%), Gaps = 47/480 (9%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
PH+V LI+ ++ + + +F K L +G QP S L+ GL
Sbjct: 106 PHNVYTLNVLIN-------SFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
I + ++++M G P+ + L + CK G L +E+ PD+V Y
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT--------------------------- 312
TLI S CK + AF L+ M + + P++VT
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS 278
Query: 313 --------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
TT+++ LCKEG V +AH + M G+ PD+V+Y LI +C +M E+
Sbjct: 279 KIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEA 338
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ M+ G P+ F+ ++ GY K R+ A+ L E+ R + + Y+ LI
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC R A +L + G +P L Y L++ LCK + A+ L + N+ P
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPD 458
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ Y +I C G +A L + G+ P+ ++ +G C +++A L
Sbjct: 459 IQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFM 518
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ D +YN + F + + S+ ++L + L GF+ C +L GM
Sbjct: 519 EMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS-----CDVSTTTLLVGM 573
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 150/328 (45%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P +V + +++S K R + L R M + ++ T L+N C +V A +
Sbjct: 72 PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ G PD S+ TLI C EG++ E+ L +M+ G PD ++ G K
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ L+ +++ +Y LI +LC+D + A +L + G P++
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
N L+ +LC L +EMVD I P+ + ++ C G +A ++D M
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+SG+ PD LI+G+C+ ++++A + K + SYN + N + + +
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K M L + R PN +T +IH L
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGL 399
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%)
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
++N +++ DAL + M+ + PS+ + ++ + R +SL +M
Sbjct: 41 LHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM 100
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
G+ + VLIN +C VN A ++L K DT S+ + +G +
Sbjct: 101 DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQI 160
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + L + + GF P+ + +I+ L K
Sbjct: 161 GEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 202/452 (44%), Gaps = 37/452 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP--------- 238
E+ F LD PS +CNFL++ L + + VY M + + P
Sbjct: 57 EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116
Query: 239 --------------------------NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N NI+ C+NG V + G + ++ +
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+V+YNTLI+ CK +L +A L M P+ VT TTLM+GLCK+G++ EA +L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G D+V Y TLI +C G + K L EM+G GI + T +V G +
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G+ A ++ + G+ Y LI LC+D R A LL + + G PS
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK V DA + M+++ K + TY L+ C G+ EA+ L + M
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416
Query: 513 --ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
E+ + P+ +LI G C E + KA + KK + +YN + + G
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + MEL K+ L LGF PN+ T +I K
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCK 508
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 220/460 (47%), Gaps = 44/460 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +GLIRE RK++ P IVS N L+NGL K + + + EM G PN
Sbjct: 161 FEAMGLIRE---MGRKSV----SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 213
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ T L CK+G +D+ LE ++++GFD D+V Y TLIS +C G L+ L+
Sbjct: 214 SVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD 273
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + ++VTY+ L++GLC+ G+ +EA+ + + M G+ PD+V+Y LI CK+G
Sbjct: 274 EMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG 333
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + LL M+ G P T +++ G KEG ++ A ++ + G Y+
Sbjct: 334 RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYN 393
Query: 420 YLIVALCQDNRPFAATSLLERI--GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ LC + A L + ++ P++ +N L+ LCK + A+ + +MV
Sbjct: 394 TLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMV 453
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +L TY L+ G+ EA+ L ++L+ G +P+S +LI+G+C + +N
Sbjct: 454 KKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLN 513
Query: 538 KAEALL-------------------------GFFAKKFQIY----------DTESYNAVF 562
A+ L G + ++ D S+N +
Sbjct: 514 IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMI 573
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + GD + ELQ + + +G P+ LT +I+ L K
Sbjct: 574 DGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 613
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 2/423 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G +E+ + G P +V+ L++GL K + M G P+
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L CK G V L + E+G D+VTYNTL+ C KG++++A L+ M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415
Query: 302 Y-RRNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ N L P++ T+ L+ GLCKEG++ +A ++ +MV +G ++V+YN L+ K G
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+ L +++ G P++FT I++ G+ K L A L E++ G++ + Y+
Sbjct: 476 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 535
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ +LC++ A SL + +G P + +N +++ K L+ +MV+
Sbjct: 536 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P T+ LI +G EA S ++ M+ SG PD+ + L+ G + D +
Sbjct: 596 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL A K + D + + + +MEL F + +++C ++
Sbjct: 656 INLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQ 715
Query: 600 LWK 602
L +
Sbjct: 716 LHQ 718
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K G I+E+ + +++ LD+GF P+ + + L++G K+ ++ ++ EM G+ P
Sbjct: 472 LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPAL 531
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N L CK G +++ +++ +PD++++NT+I K G L
Sbjct: 532 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMK 591
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD +T++TL+N L K G++ EA RMV G +PD + Y++L+ +G
Sbjct: 592 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGD 651
Query: 361 MQESKSLLYEMMGNGIYPD 379
E +LL++M G D
Sbjct: 652 TTEIINLLHQMAAKGTVLD 670
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 230/503 (45%), Gaps = 16/503 (3%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
RVL + AL FF V K + +C I+ IL N A ++ ++
Sbjct: 110 RVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISF- 168
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ VDV + L + F K + F P + +CN +L L
Sbjct: 169 -EMYGIVDVL--------------IGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILR 213
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
N + + +VY MG GI P T+N + H FCK G+V + + K++E G P V
Sbjct: 214 DKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEV 273
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T+N LI+ KKG L A L + M + + TY L+ G CK+G + EA L+ M
Sbjct: 274 TFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM 333
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V RG+SP + S+NT+++ +CKEGKM +++ L +M+ + PD + ++ G+ + G +
Sbjct: 334 VTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNI 393
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L+ EL+ +S + Y+ LI LC+ A L E + G P + Y L
Sbjct: 394 GEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ CK ++ A DEM+ + P Y A I +G + +A L +EML G
Sbjct: 454 VNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGF 513
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD V +NG C ++ +A LL + + D +Y + + E+G L + E
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE 573
Query: 577 LQKRFLRLGFAPNNLTCKYMIHS 599
+ L G P +T +IH+
Sbjct: 574 IFYDMLSRGQTPTVVTYTVLIHA 596
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 206/424 (48%), Gaps = 8/424 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ K G ++ + K + G PS V+ N L+NGL K + Q + +EM + G+
Sbjct: 246 SFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRV 305
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+N L +CK G + + E++ G P + ++NT++ +CK+G+++DA
Sbjct: 306 SPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQL 365
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++N++PD+++Y TL+ G C+ G + EA L + R LS +IV+YNTLI C+
Sbjct: 366 SDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRL 425
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + L +M+ GI+PD T ++V G K G +L A E+ G++ + Y
Sbjct: 426 GDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAY 485
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
IV + A L E + G+ P + YN + LCK ++ +A L +M+
Sbjct: 486 TARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIR 545
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P TY + + G E + +ML G P VLI+ + + ++
Sbjct: 546 DGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDW 605
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK----LMELQKRFLRLGFAPNNLTCK 594
A A +K + + +YN + N F + + + +E+Q++ G PN T
Sbjct: 606 AMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK----GIFPNKYTYT 661
Query: 595 YMIH 598
+I+
Sbjct: 662 ILIN 665
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 215/485 (44%), Gaps = 48/485 (9%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+LR ++ V AL + + + I+PT + Y ++H + A+ ++ ++ E +
Sbjct: 211 ILRDKNLLVKALEVYRMM-GEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQE--RG 267
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C S F LI+ GLI+E K G + S + N L+ G K
Sbjct: 268 CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKA-------GLRVSPYTYNPLICGYCKK 320
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ + ++EEM G+ P + N + + FCK G + L + ++ PD+++Y
Sbjct: 321 GLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISY 380
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NTLI +C+ G + +AF L + RN+ ++VTY TL++GLC+ G + A +L M++
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD+V+Y L+ CK G M +K EM+ G+ PD F + G K G
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L E+ G Y+ + LC+ A LL+++ +DG+VP Y M
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560
Query: 459 -------------------SLCKCDSVADALLLKD----------------EMVDRNIKP 483
S + +V +L EM ++ + P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY LI FC + + +A EM E G+ P+ +LIN C ++ K + L
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC---NMGKWQEAL 677
Query: 544 GFFAK 548
+A+
Sbjct: 678 RLYAQ 682
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 171/377 (45%), Gaps = 35/377 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K GL+ E+ + + + G P++ S N ++ G K + Q +M + + P
Sbjct: 316 GYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMP 375
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++N L + FC+ G++ + L+++ ++VTYNTLI C+ G L A L
Sbjct: 376 DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLK 435
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD-------------- 344
M R + PD+VTYT L+NG CK G + A + F M+H GL+PD
Sbjct: 436 EDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKL 495
Query: 345 ---------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+++YN + CK G ++E+ LL +M+ +G PD T
Sbjct: 496 GDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+ + + G L + ++ G + + Y LI A + R A + + +
Sbjct: 556 TSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQE 615
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G VP++ YN L+ CK + A EM ++ I P+ TY LI C +G+ E
Sbjct: 616 KGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQE 675
Query: 504 AVSLMDEMLESGMLPDS 520
A+ L +ML + PDS
Sbjct: 676 ALRLYAQMLGKRIRPDS 692
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 172/343 (50%), Gaps = 6/343 (1%)
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
EK+ F PD+ N ++ K L A +YR+M + P + TY T+++ CK
Sbjct: 190 FEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCK 249
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+V+ A L +M RG P V++N LI K+G++Q++K L+ EM G+ +T
Sbjct: 250 GGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYT 309
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ GY K+G L+ AL L E+ GVS + ++ ++ C++ + A L +
Sbjct: 310 YNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDML 369
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ +P + YN L+ C+ ++ +A +L DE+ RN+ ++ TY LI C +G
Sbjct: 370 KKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLE 429
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYN 559
A+ L ++M+ G+ PD VL+NG C ++ A+ FF + + D +Y
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKE---FFDEMLHVGLAPDQFAYT 486
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A + GD +K +LQ+ L GF P+ +T ++ L K
Sbjct: 487 ARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCK 529
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 9/371 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ PT +++ I++ K S A + L ++++ K+ + + LI + +
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLK--KNLMPDIISYNTLI-------YGFC 388
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G I E+F + +IV+ N L++GL +L ++ ++ E+M GI P+
Sbjct: 389 RLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVV 448
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L + CK G++ F +++ G PD Y I K G AF L M
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD++TY +NGLCK G + EA +L +M+ G PD V+Y + + A+ + G +
Sbjct: 509 LTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E + + Y+M+ G P T +++ + GRL A+ +E+Q GV + Y+ L
Sbjct: 569 REGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A + + G P+ Y L+ C +AL L +M+ + I
Sbjct: 629 INGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRI 688
Query: 482 KPSLSTYRALI 492
+P T+ AL+
Sbjct: 689 RPDSCTHGALL 699
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 113/213 (53%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K+G ++FK + L GF P +++ N +NGL KL +++ ++ ++M R G P+
Sbjct: 493 LKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDH 552
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ H +NG + + + G P +VTY LI ++ GRL+ A +
Sbjct: 553 VTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLE 612
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + V+P+++TY L+NG CK K+ +A + F M +G+ P+ +Y LI C GK
Sbjct: 613 MQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGK 672
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
QE+ L +M+G I PD+ T +++ K+
Sbjct: 673 WQEALRLYAQMLGKRIRPDSCTHGALLKKLDKD 705
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 143/306 (46%), Gaps = 35/306 (11%)
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M R LPD+ ++ L + + +A +++ M G+ P + +YNT++ ++C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G++Q + L+ +M G YP T +++ G K+G L A L+ E+ + G+ +S
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS-- 306
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
P+ YN L+ CK + +AL L +EM
Sbjct: 307 --------------PYT-------------------YNPLICGYCKKGLLVEALALWEEM 333
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V R + P+++++ ++ FC G+ +A + +ML+ ++PD LI G+C ++
Sbjct: 334 VTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNI 393
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A LL + ++ +YN + + GDL ++L++ + G P+ +T +
Sbjct: 394 GEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453
Query: 597 IHSLWK 602
++ K
Sbjct: 454 VNGACK 459
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+++ G +RE + F L G P++V+ L++ +D + EM G+ P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N+L + FCK +D+ F +++E+G P+ TY LI+ C G+ +A LY
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
M + + PD T+ L+ L K+ KV +A Q ++ G
Sbjct: 681 AQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESLILDG 721
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 247/527 (46%), Gaps = 18/527 (3%)
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
PL P L + L R + D +AL F + +P+ ++ ++HILA +F
Sbjct: 67 PLTPAL----LQAALRRVRLDPDAALHLFRLAPS----RPSLVSHAQLLHILARARRFHD 118
Query: 145 AMKMLCELVELVKDC-PHSVDVFQDLISCTEDCNW---AYVKVGLIRESFKTFRKTLDVG 200
A +L L + PH +V++D + A+ G + + F VG
Sbjct: 119 ARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVG 178
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+PS+ SCN LLN L++ VY +M G+ P+ T I+ +C++G V +
Sbjct: 179 CRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAV 238
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
F+E++E G + +LV Y+ ++ YC G DA + + R+ + P++VTYT L+ G
Sbjct: 239 EFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGY 298
Query: 321 CKEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK+G++ EA ++ M G + D V+Y +I YC+ G+M ++ + EM GI+ +
Sbjct: 299 CKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVN 358
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
F ++ G K GR+ ++ E++ G+ + Y+ LI C++ A +
Sbjct: 359 LFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR 418
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++G + YN L++ C ++ DAL L M+ R + P+ + L+ G
Sbjct: 419 MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAG 478
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
++ +A++L E L G+ + +ING C + +AE LL + D+ +Y
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYR 538
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAP-----NNLTCKYMIHSLW 601
+F+ + + G L L + LGFAP N+ + I W
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 228/478 (47%), Gaps = 27/478 (5%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
E +VK+ + D+ D ++ N Y + G + ++ + + D G ++ N
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMIN-GYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
++NGL KL +++ +V +EM +G+ P+ +++N L +C+ G + K + G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+TYNTL+ +C ++DA L+ +M +R V P+ ++ +TL++GL K GK +A
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L+ + RGL+ +++++NT+I CK G+M E++ LL M PD+ T + + GY
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G+L +A +L+ +++ G + S ++++ I + + + G P+L
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L+ CK ++ +A L EMV+ + P++ AL+ CF G+ EA ++ +
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664
Query: 511 MLESGMLPDSQIC--------------------------RVLINGYCMEKDVNKAEALLG 544
++ M+P I V+I G C + A++L
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + D +Y+++ + A G + + L+ L G PN +T +I+ L K
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 208/450 (46%), Gaps = 48/450 (10%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ + + L G P+ +SC+ LL+GL K +Q +++E G+ N TFN
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + CK G + + L++++E PD +TY TL YCK G+L A +L M
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P + + + + G + + + + M RGLSP++V+Y LI +CKEG + E+
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-------GVSIS---- 414
+L +EM+ NG+ P+ F C ++ + KEG++ A NLV LQ+ G SIS
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-NLV--LQKLVNIDMIPGCSISTIEI 681
Query: 415 ------------------RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+++ +I LC+ R A SL E + ++P Y+ L
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ S+ +A L+D M+ + P++ TY +LI C G+ AV+L +++ G+
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALL------GFFAKKFQIYDTE----------SYNA 560
P+ LI+ YC E +A L G+ + ++ D +Y
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCT 861
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ + + + G++ ++ +L G P N
Sbjct: 862 LIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 179/400 (44%), Gaps = 54/400 (13%)
Query: 151 ELVELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
EL++ +K+ CP ++ L Y K+G + + K +GF PS+
Sbjct: 520 ELLDRMKELRCPPDSLTYRTLFD-------GYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N + G + ++ EM G+ PN T+ L +CK G++ + ++
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL------------------ 310
G +P++ + L+S + K+G++++A + + + +++P
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA 692
Query: 311 --------VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V + ++ GLCK G++ +A LF + ++ PD +Y++LI G +
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ SL M+ G+ P+ T ++ G K G+L A+NL +LQ G+S + Y+ LI
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ + A L +++ ++GY + +A+ L D+M++ N+
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGY-------------------MEEAIKLLDQMIENNVD 853
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
P+ TY LI + G E L DEM G+LP + I
Sbjct: 854 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 893
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 241/501 (48%), Gaps = 12/501 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK--DCPHSVDVF 166
AL + ++ D +P Y ++ L NN+ A EL E +K +C S+ +
Sbjct: 98 ALAILHEMR-DHGCEPNVVTYNSLIDGLCKNNEPDRAQ----ELFEHMKSVECSPSMVTY 152
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
L+ + L +E +D P++++ + L++GL K N + Q +
Sbjct: 153 NTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVE 212
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ E M G P+ T+ IL CK V L ++ + G P+LVTYN+L+ C
Sbjct: 213 LLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC 272
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+ R++DA L R M R P++VTY TL++GLCK G+V++A + M+ +G +PD++
Sbjct: 273 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 332
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
YN LI CK ++ ES +LL + GI PD T ++ G + RL A L++ +
Sbjct: 333 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 392
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ G +Y LI LC+ + A L E + DG + Y+ L++ LCK V
Sbjct: 393 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A LL MV PS TY +LI C + EA+ L++EM S P + +L
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNIL 512
Query: 527 INGYCMEKDVNKAEALL-----GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
I+G C + V+ A LL A DT +Y+++ + + G +++ ++ +
Sbjct: 513 IHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEM 572
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
+ G P+++T ++ L K
Sbjct: 573 IDNGVIPDHITYSILLEGLKK 593
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 209/430 (48%), Gaps = 14/430 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D P Y +++ L N+ S A+ EL+E +K S DV I C
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAV----ELLESMKARGCSPDVITYTILVDGLCKE 239
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ V +++ R+ LD G P++V+ N LL+GL + + + +M G P
Sbjct: 240 SKVAA-----AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTP 294
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L CK G V L + ++G PDL+ YN LI+ CK +++++ L
Sbjct: 295 NVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + PD+VTY++++ GLC+ ++ EA +L + RG PD++ Y+TLI CK
Sbjct: 355 RRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ E+ L M G+G D T ++ G K GR+ A L+ + R G S Y
Sbjct: 415 GKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 474
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC N A L+E + + PS YN L+ +C+ + V A++L ++
Sbjct: 475 NSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534
Query: 479 RNIKP---SLST--YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
R + +L T Y +LI C GR EA+ EM+++G++PD +L+ G
Sbjct: 535 RCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594
Query: 534 KDVNKAEALL 543
KD+++ L+
Sbjct: 595 KDLHELRHLV 604
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 194/410 (47%), Gaps = 9/410 (2%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK-NGDVDKVN 260
QP + + LL G + IDQ + ++EM + PN +IL CK +D +
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
F ++ G D V Y L+S K+ RL+ A + M P++VTY +L++GL
Sbjct: 66 CF-RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM-------MG 373
CK + A +LF M SP +V+YNTL+ + GK++ + +L EM M
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+ P+ T +++ G K R+ A+ L+ ++ G S Y L+ LC++++ A
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A +L + G VP+L YN L+ LC+ V+DAL L +M R P++ TY LI
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +GR +A +++ +M++ G PD I +LING C V+++ ALL
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +Y++V L + L G P+ + +I L K
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 414
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 206/464 (44%), Gaps = 42/464 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I ++ + F + P++ C+ L++GL K + + M GI
Sbjct: 18 GFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVA 77
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK---------- 288
+T + L K +D+ L ++ + G +P++VTYN+LI CK
Sbjct: 78 DTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELF 137
Query: 289 -------------------------GRLNDAFYLYRIMYRR-------NVLPDLVTYTTL 316
G+L A L++ M R P+++TY+ L
Sbjct: 138 EHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVL 197
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GLCK +V +A +L M RG SPD+++Y L+ CKE K+ + +L EM+ G
Sbjct: 198 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 257
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ T ++ G + R+ AL L+ ++ G + + Y LI LC+ R A +
Sbjct: 258 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 317
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+L + G P L IYN L+ LCK D V +++ L V IKP + TY ++I C
Sbjct: 318 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
R EA L+ + G PD + LI+G C V++A L A D
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV 437
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+Y+ + + + G + + L R +R+G P+ +T +I L
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P ++ + L++GL K +D+ + +YE M G + T++ L CK G VD+
Sbjct: 396 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEA 455
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ L ++ G P +TYN+LI C L++A L M R N P VTY L++G
Sbjct: 456 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 515
Query: 320 LCKEGKVREAHQLFHRMVHR-----GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+C+ +V A L + R G + D ++Y++LI CK G++ E+ EM+ N
Sbjct: 516 MCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN 575
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
G+ PD T I+++G K L +LV++
Sbjct: 576 GVIPDHITYSILLEGLKKSKDLHELRHLVLD 606
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP Y +++ L +N+ A ++L L + CP V ++ LI
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLL--LYVKSRGCPPDVILYSTLID-------GLC 412
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+F + G +V+ + L++GL K +D+ + M R+G P+T
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L C +D+ +E++E P VTYN LI C+ R++ A L
Sbjct: 473 TYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQA 532
Query: 302 YRRNVLP-----DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
R V D + Y++L++GLCK G+V EA F M+ G+ PD ++Y+ L+
Sbjct: 533 KARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLK 592
Query: 357 KEGKMQESKSLLYEMM 372
K + E + L+ + M
Sbjct: 593 KSKDLHELRHLVLDQM 608
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + TY AL+ FC G +A DEM ++P+ +C +LI+G C K +A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAK--RSIDA 63
Query: 542 LLGFFAKKFQ--IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L F A + + DT Y A+ + ++ L + + + G PN +T +I
Sbjct: 64 LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 600 LWKGME 605
L K E
Sbjct: 124 LCKNNE 129
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 259/566 (45%), Gaps = 51/566 (9%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
ET N + +++ +C+ + KGD + LL+ L H++ L + + + FF
Sbjct: 8 ETSNKH-LIESVCAIIVKGDWN-NLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFF 65
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT 173
W ++ + + ++H+L + F A ++L ++ + ++ S V L+
Sbjct: 66 KWAQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQ--REILSSPSVLTSLVRIH 123
Query: 174 ED-------CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+D +W Y K + ++ + F + +P + +C L+N LLK
Sbjct: 124 DDPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSM 183
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
W+VY+ M + G+ PN + +N L H K+ DV++ L ++E +G PD+ TYNTLI+
Sbjct: 184 VWKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIA 243
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
YCKKG +A + M R + D+V+Y +L+ G CKEGK+REA ++F + + P
Sbjct: 244 LYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIP 301
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP------------------------- 378
+ V+Y TLI YCK + +E+ L M+ G+YP
Sbjct: 302 NHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLL 361
Query: 379 ----------DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
D+ TC ++ Y K G L SAL ++ G++ + Y LI C+
Sbjct: 362 HEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKT 421
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ +A LL + G+ P+ Y+ +++S CK D+ L L DE + + ++S Y
Sbjct: 422 SELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLY 481
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
RALI C I R A L+ M G+ DS I L Y + N A +L A+
Sbjct: 482 RALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMAR 541
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKL 574
+ + + Y + A +S++
Sbjct: 542 RRLMITVKIYRCFSALDASQNKVSQM 567
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 168/333 (50%), Gaps = 10/333 (3%)
Query: 272 DPDLVTY--NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
DP++ ++ + ++ Y K +DA ++ M N+ P L T LMN L K+G
Sbjct: 125 DPEVNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMV 184
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+++ RMV G+ P+I YN LI A K ++ ++ +L EM G+ PD FT ++
Sbjct: 185 WKVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIAL 244
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K+G AL++ +++R G+++ Y+ LI C++ + A + I +D +P+
Sbjct: 245 YCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI-KDA-IPN 302
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
Y L++ CK + +AL L++ MV + + P + TY +++ C GR +A L+
Sbjct: 303 HVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLH 362
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE---SYNAVFNMFA 566
EM E + DS C LIN YC D+N A L F K + T +Y A+ + F
Sbjct: 363 EMSERKVQADSVTCNTLINAYCKIGDLNSA---LKFKTKMLEAGLTPNSFTYKALIHGFC 419
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ +L EL L GF+PN T +++ S
Sbjct: 420 KTSELESAKELLFGMLDAGFSPNYRTYSWIVDS 452
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
+ T+ + AY++ G +R++ + +R T + F +C +L L+K
Sbjct: 60 AIFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C+D A +R+ Q+ +Y L+
Sbjct: 300 QAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM G +
Sbjct: 360 SGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DL ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 71 DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 191 GDLDEGFRLKSAMLASGVQ-----------------------------------PDVYTY 215
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+ + + P+ T+ LI C GR A+ + +ML
Sbjct: 216 SVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + +DGDL
Sbjct: 276 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDT 335
Query: 574 LMELQKRFLR 583
E +KR ++
Sbjct: 336 AFEHRKRMIQ 345
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R D+ ++ L
Sbjct: 19 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGL 78
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 138
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 139 PASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G++P+S LI+G+C
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHC 258
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + L G P+ +
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 318
Query: 592 TCKYMI 597
T +I
Sbjct: 319 TYTTLI 324
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + ++ ++
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 250
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 236/482 (48%), Gaps = 18/482 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F +K+ +E P+ Y ++ L K AM + E+++ H V F
Sbjct: 29 AQELFEHMKS-VECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRS---HDVISFNI 84
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G I + + FRK +D P++++ + L++GL K N + Q ++
Sbjct: 85 LVT-------GLCRAGKIETALEFFRK-MDDRCSPNVITYSVLIDGLCKANRVSQAVELL 136
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M G P+ T+ IL CK V L ++ + G P+LVTYN+L+ C+
Sbjct: 137 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 196
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
R++DA L R M R P++VTY TL++GLCK G+V++A + M+ +G +PD++ Y
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI CK ++ ES +LL + GI PD T ++ G + RL A L++ ++
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G +Y LI LC+ + A L E + DG + Y+ L++ LCK V +
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A LL MV PS TY +LI C + EA+ L++EM S P + +LI+
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIH 436
Query: 529 GYCMEKDVNKAEALLGFFAKKFQ---IYDTESYNAVFNMFAEDGDLSKLMELQ-KRFLRL 584
G C + V+ A L +F + I D +Y+ + + DL +L L + ++L
Sbjct: 437 GMCRMERVDSAA--LDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQL 494
Query: 585 GF 586
G+
Sbjct: 495 GY 496
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 203/403 (50%), Gaps = 2/403 (0%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D G +P++V+ N L++GL K N D+ +++E M + P+ T+N L + G ++
Sbjct: 3 DHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 62
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ +++ + D++++N L++ C+ G++ A +R M R P+++TY+ L+
Sbjct: 63 RAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLI 120
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+GLCK +V +A +L M RG SPD+++Y L+ CKE K+ + +L EM+ G
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ T ++ G + R+ AL L+ ++ G + + Y LI LC+ R A ++
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L + G P L IYN L+ LCK D V +++ L V IKP + TY ++I C
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
R EA L+ + G PD + LI+G C V++A L D +
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
Y+ + + + G + + L R +R+G P+ +T +I L
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 206/417 (49%), Gaps = 9/417 (2%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH---TFNILTHV 249
F V PS+V+ N LL+GL + +++ +++EM + +H +FNIL
Sbjct: 33 FEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM----LDRRSHDVISFNILVTG 88
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C+ G ++ F K+++ P+++TY+ LI CK R++ A L M R PD
Sbjct: 89 LCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
++TYT L++GLCKE KV A ++ M+ G P++V+YN+L+ C+ ++ ++ +L+
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M G P+ T ++ G K GR+ A ++ ++ G + IY+ LI LC+ +
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ + +LL R G P + Y+ ++ LC+ + + +A L + R P + Y
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI C G+ EA L + M G D LI+G C V++A LL +
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
T +YN++ + L + +EL + R AP+ +T +IH + + MER
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR-MER 443
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 168/338 (49%), Gaps = 2/338 (0%)
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ + G +P++VTYN+LI CK + A L+ M P +VTY TL++GL + GK
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ A LF M+ R S D++S+N L+ C+ GK+ E+ + M + P+ T +
Sbjct: 61 LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKI-ETALEFFRKMDDRCSPNVITYSV 118
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G K R+ A+ L+ ++ G S Y L+ LC++++ AA +L + G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
VP+L YN L+ LC+ V+DAL L +M R P++ TY LI C +GR +A
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+++ +M++ G PD I +LING C V+++ ALL D +Y++V
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
L + L G P+ + +I L K
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKA 336
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 247/527 (46%), Gaps = 18/527 (3%)
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
PL P L + L R + D +AL F + +P+ ++ ++HILA +F
Sbjct: 67 PLTPAL----LQAALRRVRLDPDAALHLFRLAPS----RPSLVSHAQLLHILARARRFHD 118
Query: 145 AMKMLCELVELVKDC-PHSVDVFQDLISCTEDCNW---AYVKVGLIRESFKTFRKTLDVG 200
A +L L + PH +V++D + A+ G + + F VG
Sbjct: 119 ARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVG 178
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+PS+ SCN LLN L++ VY +M G+ P+ T I+ +C++G V +
Sbjct: 179 CRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAV 238
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
F+E++E G + +LV Y+ ++ YC G DA + + R+ + P++VTYT L+ G
Sbjct: 239 EFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGY 298
Query: 321 CKEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK+G++ EA ++ M G + D V+Y +I YC+ G+M ++ + EM GI+ +
Sbjct: 299 CKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVN 358
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
F ++ G K GR+ ++ E++ G+ + Y+ LI C++ A +
Sbjct: 359 LFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCR 418
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++G + YN L++ C ++ DAL L M+ R + P+ + L+ G
Sbjct: 419 MMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAG 478
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
++ +A++L E L G+ + +ING C + +AE LL + D+ +Y
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYR 538
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAP-----NNLTCKYMIHSLW 601
+F+ + + G L L + LGFAP N+ + I W
Sbjct: 539 TLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 228/478 (47%), Gaps = 27/478 (5%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
E +VK+ + D+ D ++ N Y + G + ++ + + D G ++ N
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMIN-GYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT 364
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
++NGL KL +++ +V +EM +G+ P+ +++N L +C+ G + K + G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+TYNTL+ +C ++DA L+ +M +R V P+ ++ +TL++GL K GK +A
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L+ + RGL+ +++++NT+I CK G+M E++ LL M PD+ T + + GY
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G+L +A +L+ +++ G + S ++++ I + + + G P+L
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNL 604
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L+ CK ++ +A L EMV+ + P++ AL+ CF G+ EA ++ +
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQK 664
Query: 511 MLESGMLPDSQIC--------------------------RVLINGYCMEKDVNKAEALLG 544
++ M+P I V+I G C + A++L
Sbjct: 665 LVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFE 724
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + D +Y+++ + A G + + L+ L G PN +T +I+ L K
Sbjct: 725 SLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCK 782
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 209/469 (44%), Gaps = 67/469 (14%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ + + L G P+ +SC+ LL+GL K +Q +++E G+ N TFN
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + CK G + + L++++E PD +TY TL YCK G+L A +L M
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P + + + + G + + + + M RGLSP++V+Y LI +CKEG + E+
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-------GVSIS---- 414
+L +EM+ NG+ P+ F C ++ + KEG++ A NLV LQ+ G SIS
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA-NLV--LQKLVNIDMIPGCSISTIEI 681
Query: 415 ------------------RDIYDYLIVALCQDNRPFAATSLLERIGQD------------ 444
+++ +I LC+ R A SL E +
Sbjct: 682 DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSL 741
Query: 445 -----------------------GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
G P++ YN L+ LCK ++ A+ L +++ + I
Sbjct: 742 IHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGI 801
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ TY LI +C G++ EA L +M+E G+ P +LI G C + + +A
Sbjct: 802 SPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIK 861
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
LL + + +Y + + + + G++ ++ +L G P N
Sbjct: 862 LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 910
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 193/427 (45%), Gaps = 62/427 (14%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V + ISC+ + + K G ++ +++TL G ++++ N ++NGL K+ + +
Sbjct: 460 VAPNEISCSTLLDGLF-KAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF------------- 271
++ + M + P++ T+ L +CK G + + K+E GF
Sbjct: 519 EELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITG 578
Query: 272 ----------------------DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
P+LVTY LI+ +CK+G L++A LY M + P+
Sbjct: 579 HFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPN 638
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI------------------------ 345
+ + LM+ KEGKV EA+ + ++V+ + P
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698
Query: 346 --VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
V +N +IF CK G++ ++KSL + PD FT ++ G G + A +L
Sbjct: 699 ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ G++ + Y+ LI LC+ + A +L ++ G P+ YN L++ CK
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKE 818
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+A LK +MV+ I+P++ TY LI C G EA+ L+D+M+E+ + P+
Sbjct: 819 GKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY 878
Query: 524 RVLINGY 530
LI+GY
Sbjct: 879 CTLIHGY 885
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 187/400 (46%), Gaps = 35/400 (8%)
Query: 151 ELVELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
EL++ +K+ CP ++ L Y K+G + + K +GF PS+
Sbjct: 520 ELLDRMKELRCPPDSLTYRTLFD-------GYCKLGQLGTATHLMNKMEHLGFAPSVEMF 572
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N + G + ++ EM G+ PN T+ L +CK G++ + ++
Sbjct: 573 NSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN 632
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL------------------ 310
G +P++ + L+S + K+G++++A + + + +++P
Sbjct: 633 NGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIA 692
Query: 311 --------VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V + ++ GLCK G++ +A LF + ++ PD +Y++LI G +
Sbjct: 693 DGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSID 752
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ SL M+ G+ P+ T ++ G K G+L A+NL +LQ G+S + Y+ LI
Sbjct: 753 EAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLI 812
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ + A L +++ ++G P++ Y+ L+ LC + +A+ L D+M++ N+
Sbjct: 813 DEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVD 872
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
P+ TY LI + G E L DEM G+LP + I
Sbjct: 873 PNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 912
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 213/425 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KV + ++ ++ + G P++V+ + +++G + +D ++++ +M G P
Sbjct: 51 GFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 110
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L C+NG +D+ L+++ E G PD +Y+TL++ CK G+++ A ++
Sbjct: 111 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 170
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ PD+V Y+TL+ GLCK G++ EA +LF +M PD+V++ L+ CK
Sbjct: 171 EDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 230
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++QE++ +L M P+ T ++ G K G++ A + + G+ + Y
Sbjct: 231 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 290
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C N +A L+E + G +P + YN L++ LCK +A L +M
Sbjct: 291 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 350
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P + TY LI FC + R A +L D+ML+ +LPD L+ GYC V+
Sbjct: 351 KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDD 410
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
AE LL D +Y ++ + F + G + + + KR + G PN +T +I
Sbjct: 411 AERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALID 470
Query: 599 SLWKG 603
+ +
Sbjct: 471 AFCRA 475
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 235/485 (48%), Gaps = 15/485 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P +Y ++ L K A+K+ + DCP V + LI+
Sbjct: 143 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN--GDCPPDVVAYSTLIA-------GLC 193
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K F K + +P +V+ L++GL K + + + QV E M PN
Sbjct: 194 KTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 253
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L CK G V +++ G +P++VTYN+LI +C ++ A L M
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LPD++TY TL++GLCK G+ EA++LF M + +PD+++Y+ LI +CK ++
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
+++L +M+ + PD T +V+GY G + A L+ E+ S D+Y Y
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM--VASDCSPDVYTYT 431
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ C+ R A +L+R+ + G P++ Y L+++ C+ A L +EMV
Sbjct: 432 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGN 491
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEM-LESGMLPDSQICRVLINGYCMEKDVNK 538
++P++ TYR+LI FCG G EA +++ + + D RV+++G C ++
Sbjct: 492 GVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSA 551
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME-LQKRFLRLGFAPNNLTCKYMI 597
A LL + + Y A+ + +L K ME L++ L PN + +I
Sbjct: 552 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611
Query: 598 HSLWK 602
L +
Sbjct: 612 QELAR 616
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 190/364 (52%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+ ++++ +++GL K N + + + +M + G PN T+N+L + FCK V +
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L++++E G P++VTY+T+I +C++ +++ A+ L+R M +P+LVTY TL++GLC
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+ G + EA++L M RGL PD SY+TL+ CK GK+ + + + PD
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ G K GRL A L +++ + L+ LC+ +R A +LE +
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
P++ Y+ L++ LCK V DA + M+ R I+P++ TY +LI FC
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A+ LM+EM +G LPD LI+G C +A L G KF D +Y+ +
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363
Query: 562 FNMF 565
F
Sbjct: 364 IGGF 367
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 197/394 (50%), Gaps = 46/394 (11%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
++C +V + LI K G +R++ + F++ + G +P++V+ N L++G
Sbjct: 246 RNCTPNVITYSSLID-------GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 298
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN---------------- 260
N +D + EEM G P+ T+N L CK G + N
Sbjct: 299 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 358
Query: 261 -------GF--LEKIE----------EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
GF LE+I+ ++ PD+VT++TL+ YC G ++DA L M
Sbjct: 359 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 418
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD+ TYT+L++G CK G++ EA ++ RM RG P++V+Y LI A+C+ GK
Sbjct: 419 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 478
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL EM+GNG+ P+ T + ++ G+ G L A ++ L+R + D++ Y
Sbjct: 479 TVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLER-DENCKADMFAYR 537
Query: 422 IV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM-VD 478
++ LC+ R AA LLE I Q G P +IY L+ LC+ + A+ + +EM +
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
R +P+ Y A+I GR EA +L DE+L
Sbjct: 598 RKSRPNAEAYEAVIQELAREGRHEEANALADELL 631
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A ++L E+V DC V + L+ + KVG + E+ + ++ G QP+
Sbjct: 411 AERLLEEMV--ASDCSPDVYTYTSLVD-------GFCKVGRMVEARRVLKRMAKRGCQPN 461
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V+ L++ + +++ EEM G+ PN T+ L FC GD+++ LE
Sbjct: 462 VVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLE 521
Query: 265 KIE-EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++E +E D+ Y ++ C+ GR++ A L + + P Y L+ GLC+
Sbjct: 522 RLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 581
Query: 324 GKVREAHQLFHRM-VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
++ +A ++ M + R P+ +Y +I +EG+ +E+ +L E++GN
Sbjct: 582 KELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 633
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%)
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ LCK + + +A +M + P+ TY LI FC + + A L+ EM ESG
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ P+ +I+G+C + V+ A L + + + +YN + + +G + +
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL G P+ + ++ L K
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCK 159
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 202/441 (45%), Gaps = 34/441 (7%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + LD G+ P + + ++ L ++N ID+ + + ++ G P + ILT FCK
Sbjct: 148 FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCK 207
Query: 253 NG-------------------------------DVDKVNGFLEKIEEEGFDPDLVTYNTL 281
G D D FL+++ E PD+ TYN L
Sbjct: 208 TGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNIL 267
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I CK + + A + M R V PD VT+ ++M+GLCK GK AH L M R
Sbjct: 268 IDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNC 327
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P +YNTLI CK+ + +K L+ E + +G PD T I+ G K GR+ A
Sbjct: 328 RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFE 387
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
LV E+ G + + Y+ LI LC+ ++ A LLE + G+VP + Y +++ LC
Sbjct: 388 LVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLC 447
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + AL + + M+ R PS+ TY AL+ C GR EA + EM+ D+
Sbjct: 448 KEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
L+NGYC +A+ ++ I + YNA+ + + ++G L ++ + +
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVFEDM 564
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
G PN T ++ L K
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCK 585
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 187/385 (48%), Gaps = 4/385 (1%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D GF+ S + N L LL+ D+ ++E M G P+++T++++ C+ +D
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
K L+K + GF P++ Y L ++CK GRL DA ++R + PD + Y ++
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAII 233
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+G C++ A + M R ++PD+ +YN LI CK K ++ +L+EM+ G+
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PDT T I+ G K G+ A +L+ + S Y+ LI LC+ A L
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
++ G+VP + Y+ L + LCK + +A L EM + P+L TY LI C
Sbjct: 354 VDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCK 413
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
++ +A L++ ++ SG +PD ++++G C E ++KA ++ K+ +
Sbjct: 414 ASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 473
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFL 582
Y A+ G + + + K +
Sbjct: 474 YTALMEGLCRTGRVDEAHHIFKEMV 498
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 171/335 (51%), Gaps = 5/335 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+F G P +VS N +++GL K + + QV ++M + GI P+
Sbjct: 585 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 644
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FCK D G L+ + + G DPD VTYNTLIS + RL DA+ L M
Sbjct: 645 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704
Query: 302 YRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
R V+ TY T+++ LCKEG +++A L M G+ + V+YN I CKEG+
Sbjct: 705 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 764
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-GVSISRDIYD 419
+ E+ SLL EM D + ++ G K +L A L E+ G+ I+ ++
Sbjct: 765 LDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI A + R A +LL + Q G PS+ YN ++ LCK D V A L DEM R
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 881
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
I S +Y LI CG GR EA+ +++EM S
Sbjct: 882 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 196/383 (51%), Gaps = 13/383 (3%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
++V+ ++ P+ +DV+ L+ Y K G + E F G P+I + N
Sbjct: 527 KVVDGIRGTPY-IDVYNALMD-------GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 578
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+++GL K +D+ + E M G P+ ++NI+ K + L+++ + G
Sbjct: 579 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 638
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD VTYNTL++ +CK+ R +DA + + M + V PD VTY TL++GL + ++ +A+
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698
Query: 331 QLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+L H M+ G + +YNT+I CKEG ++++ L+ M G+G+ +T T I +
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERIGQDGYVP 448
KEGRL A +L+ E+ +S Y +I+ LC+ + A+ L E + G
Sbjct: 759 LCKEGRLDEASSLLSEMDTLRDEVS---YTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 815
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ +N L+++ K + +AL L MV R PS+ TY +I C C + + +A L
Sbjct: 816 TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875
Query: 509 DEMLESGMLPDSQICRVLINGYC 531
DEM G++ S VLI G C
Sbjct: 876 DEMAVRGIVASSVSYTVLIYGLC 898
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 213/480 (44%), Gaps = 50/480 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +IV L + A+KM+ + L + C SV + L+ +
Sbjct: 434 PDVVTYTIIVDGLCKEGRLDKALKMVEGM--LKRGCTPSVITYTALME-------GLCRT 484
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ F++ + ++ L+NG K + + +V + I P +
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG---IRGTPYIDVY 541
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +CK G +D++ E + G P++ TYN ++ CK G++++AF M+
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+PD+V+Y +++GL K K +EA Q+ +M+ G+ PD V+YNTL+ +CKE + +
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M+ G+ PD T ++ G + RL A L+ E+ R G +S
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS--------- 712
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A T+ YN +++ LCK + ALLL D M ++
Sbjct: 713 ---------ACTT----------------YNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY I C GR EA SL+ EM L D +I G C + +++A L
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLA 804
Query: 544 -GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A K + ++N + + F + L + + L ++ G +P+ +T +I L K
Sbjct: 805 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK 864
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKN 118
N I+D +C K+G LL L+ H+ H + ++++V+ F + +
Sbjct: 718 NTIIDRLC---KEGCLKQALL------LMDHMTGHGV-------EANTVTYNIFIDRLCK 761
Query: 119 DLEIKPTSS------------NYCLIVHILAWNNKFSFAMKMLCELVELVKDC--PHSVD 164
+ + SS +Y ++ L + A K+ E+V + C H+ +
Sbjct: 762 EGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 821
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ D + T+ + A +GL+ + G PS+++ N ++ L KL+ +D+
Sbjct: 822 LLIDAFTKTKRLDEALTLLGLMVQR----------GCSPSVITYNMVITCLCKLDKVDKA 871
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
W++++EM GI ++ ++ +L + C G + LE++
Sbjct: 872 WELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 207/425 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+++ G + + + + + G S V+ N L++G K I++ +EM G P
Sbjct: 255 GFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRP 314
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN L + C+ G V L+ + +EGFDPD+ TYN+LI CK G + +A +
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P+ VTY TL++ LCKE +V EA +L + +G+ PD+ ++N+LI C
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 434
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + L EM G +PD FT +++ GRL AL+L+ E++ G S + Y
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C++ R A + + + G ++ YN L++ LCK V +A L D+M+
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KP TY +L+ FC G +A ++ M +G PDS LI G V
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVEL 614
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A LL K + ++YN V + S+ + L + + G P+ +T K +
Sbjct: 615 ASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFR 674
Query: 599 SLWKG 603
L G
Sbjct: 675 GLCSG 679
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 198/412 (48%), Gaps = 1/412 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I E + + GF+P + N L+NGL ++ + ++ + M + G P
Sbjct: 290 GYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP 349
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L CK G+V++ L ++ F P+ VTYNTLIS+ CK+ ++ +A L
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELA 409
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R++ + +LPD+ T+ +L+ GLC R A +LF M +G PD +YN LI + C
Sbjct: 410 RVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++E+ SLL EM +G + T ++ G+ K R+ A + E++ G+S + Y
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC++ R A L++++ +G P YN L+ C+ + A + M
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+P TY LI GR A L+ + GM+ Q +I EK ++
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649
Query: 539 AEALLGFFAKKFQIYDTESYNAVF-NMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L +K D +Y VF + + G + + ++ GF P+
Sbjct: 650 AVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 182/351 (51%), Gaps = 1/351 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + E+ + + + F P+ V+ N L++ L K N +++ ++ + GI P+
Sbjct: 363 KLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 422
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + E+++ +G PD TYN LI S C +GRL +A L + M
Sbjct: 423 TFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++VTY TL++G CK ++ EA ++F M +G+S ++V+YNTLI CK ++
Sbjct: 483 ESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRV 542
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ L+ +M+ G+ PD FT ++ + + G + A ++V + G Y L
Sbjct: 543 EEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTL 602
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I+ L + R A+ LL + G V + + YN ++++L + ++A+ L EM+++
Sbjct: 603 ILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGD 662
Query: 482 KPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P TY+ + C G G GEAV + EM + G LPD +L G C
Sbjct: 663 PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 180/360 (50%), Gaps = 3/360 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + R G P + + N L+ GL N +++EEM G P+ T+N+
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L C G +++ L+++E G ++VTYNTLI +CK R+ +A ++ M +
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ ++VTY TL++GLCK +V EA QL +M+ GL PD +YN+L+ +C+ G ++++
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
++ M NG PD+ T ++ G K GR+ A L+ +Q G+ ++ Y+ +I AL
Sbjct: 582 DIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKAL 641
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS-VADALLLKDEMVDRNIKPS 484
++ R A L + + G P Y + LC + +A+ EM D+ P
Sbjct: 642 FREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S++ L C + + L++ +++ DS++ +I G+ + A A LG
Sbjct: 702 FSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVS--MIMGFLKIRKFQDALATLG 759
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 179/403 (44%), Gaps = 1/403 (0%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
F PS V +L L K +V +EM G TF IL + K D+
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160
Query: 261 GFLEKIEEE-GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ +EEE G D TYN L++ +L + M R + PD+ T+ L+
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ ++R A + M GLSPD ++ TL+ + +EG M + + +M+ G
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++V GY KEGR+ L+ + E+ G R ++ L+ LC+ A +L+
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q+G+ P + YN L+ LCK V +A+ + ++M+ R+ P+ TY LI C
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKEN 400
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ EA L + G+LPD LI G C+ + A L K D +YN
Sbjct: 401 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYN 460
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G L + + L K G + N +T +I K
Sbjct: 461 MLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCK 503
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 190/365 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G+ E+ F + + G P +V + L++GL + + + + ++EM GI
Sbjct: 1094 ALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 1153
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+N L H + G +V FL + + GF PD T+ LI CK+G++ +A +
Sbjct: 1154 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M + PD++TY TLMNGLC G++ +A +LF + RG+ ++ SYN LI YCK+
Sbjct: 1214 ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 1273
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ E+ EM G+ P T T ++ + GR+ +A L VE+Q G + Y
Sbjct: 1274 QKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 1333
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC++ A L + I + + P++E+++ L++ +C+ + +A DE+
Sbjct: 1334 CVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISK 1393
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P Y LI C G EAV L+ +M E G LPDS V+I E ++++
Sbjct: 1394 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 1453
Query: 539 AEALL 543
A LL
Sbjct: 1454 AIQLL 1458
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 195/393 (49%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ + +++ L K + ++ EM GI P+ ++ L C+ G + + F +
Sbjct: 1085 VFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFK 1144
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E G D+ TYN+LI + G + + +M R PD T+T L++GLCKEG
Sbjct: 1145 EMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEG 1204
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
KV EA Q+ M H+G PDI++YNTL+ C G+++++ L + GI + F+
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 1264
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I++ GY K+ ++ A E++ G+ S Y+ LI ALCQ R A L +
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G L Y L++ LCK + +A+ L + KP++ + L+ C G+ EA
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
DE+ ++G+ PD+ +LING C + +++A LL +K + D+ ++N +
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
++ ++ + ++L + F+P+ ++
Sbjct: 1445 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 192/412 (46%), Gaps = 8/412 (1%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L GF+P V+ L+ G+ N I Q+++EM + G+ + T+ IL + CK
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKA--- 1064
Query: 257 DKVNGFLEKIEEE---GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
+ G K+ E+ D+ TY +I + CK G +A ++ M +LPD+V Y
Sbjct: 1065 -RKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
++LM+GLC+ G+++EA + F M RG+S D+ +YN+LI + G +E L M+
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G PD FT I++ G KEG++ A ++ ++ G Y+ L+ LC +
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
AT L E + G ++ YN L+ CK + +A +EM + +KPS TY LI
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C GR A L EM G VL++G C + +A L K
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP 1363
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW-KGM 604
+ E ++ + + G L + + + G P+ + +I+ L KGM
Sbjct: 1364 NIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 1415
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 195/453 (43%), Gaps = 43/453 (9%)
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
+ C + +K + ++ K F ++L P + N LL + KL + +Y ++
Sbjct: 918 DQCRFGIIK---LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKIND 974
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+GI P+ +T NIL H C V G + GF+PD VT TL+ + + D
Sbjct: 975 VGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPD 1034
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNG---------------------------------- 319
A L+ M ++ +L D TY L+NG
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDA 1094
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+G EA +F M+ G+ PD+V Y++L+ C+ G+++E+ EM G GI D
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154
Query: 380 TFTCQIIVQGYGKEG---RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+T ++ G + G + LNL+V+ G S + LI LC++ + A
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDR---GFSPDAFTFTILIDGLCKEGKVGEAQQ 1211
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+LE + G P + YN LM LC + DA L + + DR IK ++ +Y LI +C
Sbjct: 1212 ILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 1271
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+ EA +EM G+ P + LI C V A+ L Q
Sbjct: 1272 KDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLS 1331
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+Y + + ++G L + M+L + + PN
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPN 1364
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ GL +E +D GF P + L++GL K + + Q+ E M G P+
Sbjct: 1167 RAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDIL 1226
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + C G ++ E + + G ++ +YN LI+ YCK ++++AF + M
Sbjct: 1227 TYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM 1286
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P VTY TL+ LC+ G+VR A +LF M G + +Y L+ CK G +
Sbjct: 1287 RPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHL 1346
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ L + P+ I++ G + G+L A E+ + G+ Y+ L
Sbjct: 1347 EEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNIL 1406
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC A LL ++ + G +P +N ++++L K + + +A+ L +EM +RN
Sbjct: 1407 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 1466
Query: 482 KPSLSTYRALIC 493
P + L+C
Sbjct: 1467 SPDEAVTSMLLC 1478
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 133/263 (50%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
VG + ++ K F D G + ++ S N L+NG K ID+ ++ +EEM G+ P+T T
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L C++G V +++ G L TY L+ CK G L +A L++ +
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++ ++ L++G+C+ GK+ EA + F + GL PD ++YN LI C +G +
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL++M G PD+ T +I+Q KE + A+ L+ E++ S + L+
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Query: 423 VALCQDNRPFAATSLLERIGQDG 445
D + AA L Q G
Sbjct: 1478 CLASFDPQWHAALVSLPNALQKG 1500
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 154/363 (42%), Gaps = 1/363 (0%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T TFN L K G V KI + G PDL T N LI C + F +
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ +R PD VT TTL+ G+ E + +A QLF M +GL D +Y LI CK
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
K + L +M GN D FT +I+ K+G AL++ E+ G+ +
Sbjct: 1064 ARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ LC+ R A + + G + YN L+ L + + + MV
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
DR P T+ LI C G+ GEA +++ M G PD L+NG C+ +
Sbjct: 1183 DRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE 1242
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A L A + + SYN + N + +D + + + G P+ +T +I
Sbjct: 1243 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLI 1302
Query: 598 HSL 600
+L
Sbjct: 1303 GAL 1305
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 202/426 (47%), Gaps = 12/426 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ LL+GL + + + ++ +M PN TF L +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G + + L+++ E+G P +TY T++ CKKG A L R M +++
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++ LCK+G+ +A LF M +G+ PD+ +YN++I +C G+ +++ L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ G+ + Y +I C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + + G P+L +N L++ C + D + L EM + + +T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI F +G A+ L+ EM+ SG+ PD C L++G C + A +
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 548 KKFQIYDT-----------ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K + D ++YN + + +G + EL + G P+ +T M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 597 IHSLWK 602
I L K
Sbjct: 553 IDGLCK 558
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 199/399 (49%), Gaps = 1/399 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V L+ ++++ D +Y++M R I + ++FNIL FC +
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD+VT+ TL+ C + R+++A L+ M+ P++VT+TTLMNGLC+
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG++ EA L RM+ GL P ++Y T++ CK+G + +LL +M + I P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ K+GR A NL E+Q G+ Y+ +IV C R A LL+ +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G P+ LI+GYC K ++ LL + + DT +YN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L + + G P+ +TC ++ L
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 210/452 (46%), Gaps = 20/452 (4%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-------- 283
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F DL + + G ++ + ++ L+ P +V+ N L+N +K
Sbjct: 284 KGIFPDLFT-YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T++ + FCK +D + +G P+L+T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M ++ D TY TL++G G + A L M+ GL
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ +TL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + + +G + P++
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L+ CK V D L L EM R I + TY LIC F +G A+ + EM
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 248/546 (45%), Gaps = 57/546 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L ++ S A+ + ++ E C +V F
Sbjct: 133 ALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT--CRPNVVTFTT 189
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-------LNCI 221
L++ + G I E+ + ++ G QP+ ++ +++G+ K LN +
Sbjct: 190 LMN-------GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 222 DQCWQV-----------------------------YEEMGRIGICPNTHTFNILTHVFCK 252
+ +V + EM GI P+ T+N + FC
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G L+++ E PD+VTYN LI+++ K+G+ +A LY M R ++P+ +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+++++G CK+ ++ A +F+ M +G SP+++++NTLI YC ++ + LL+EM
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ DT T ++ G+ G L +AL+L+ E+ G+ D L+ LC + +
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 433 AATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A + + + + +G P ++ YN L+ L +A L +EM R I
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY ++I C R EA + D M P+ LINGYC V+
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L ++ + + +Y + F + G+++ +++ + + G P+ +T + M+ LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Query: 602 KGMERK 607
E K
Sbjct: 663 SKEELK 668
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 183/419 (43%), Gaps = 22/419 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+ +P + I+D +C + D+ + K + P L + S ++ C S S
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN-SMIVGFCSSGRWSD 308
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
+ +I P Y +++ KF A ++ E+ L + + + +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSM 366
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I + K + + F G P++++ N L++G ID ++
Sbjct: 367 ID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM G+ +T T+N L H F GD++ L+++ G PD+VT +TL+ C G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 290 RLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+L DA ++++M + V PD+ TY L++GL EGK EA +L+ M H
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD ++Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
L L E+ R G+ + Y LI + A + + + G P ++ I N L
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 20/331 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ N+ A M + K C ++ F LI Y
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA--TKGCSPNLITFNTLID-------GYC 406
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
I + + + + G + N L++G + ++ + +EM G+CP+
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 242 TFNILTHVFCKNGDV-DKVNGF--LEKIEEE--------GFDPDLVTYNTLISSYCKKGR 290
T + L C NG + D + F ++K +++ G +PD+ TYN LIS +G+
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A LY M R ++PD +TY+++++GLCK+ ++ EA Q+F M + SP++V++ T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YCK G++ + L EM GI + T ++ G+ K G + AL++ E+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERI 441
V ++ L A ++LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+C+ LL+GL + ++++ M +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+TTL+NG CK G+V + +LF M RG+ + ++Y TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I + K G + + + EM+ +G+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 237/481 (49%), Gaps = 22/481 (4%)
Query: 140 NKFSFAMKMLC--ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL 197
N + + +LC ELVE H V + +C + VK G ++ + + +
Sbjct: 116 NVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNV-LLYVLVKTGRFELLWRIYEEMI 174
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
G PS+++ L++G + + + ++++EM GI P + IL C + ++
Sbjct: 175 SNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIE 234
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ + E G P++ TYNTL+ YCK A LY+ M ++PD+VT+ L+
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILI 294
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+GLCK G+++ A LF M+ ++P+I YN+LI AYCK G + E+ +L E+ +
Sbjct: 295 DGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVS 354
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD FT I+++G R A N+ ++ + G+ + Y+ LI C++ + A +
Sbjct: 355 PDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEI 414
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
++ ++G P++ ++ L++ CK ++ A+ + EMV +++ P + TY A+I C
Sbjct: 415 CSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCK 474
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ------ 551
G EA+ L +ML++G+ P+ L++G C + ++ A L F +K +
Sbjct: 475 YGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDA---LELFTEKIEFQTPRC 531
Query: 552 ----------IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ + +Y A+ + +DG SK ++L R G P+ + M+ L+
Sbjct: 532 NVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591
Query: 602 K 602
+
Sbjct: 592 Q 592
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 239/512 (46%), Gaps = 7/512 (1%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ RVL ++ V AL FF W + K + +Y +I+ ILA N A ++ ++V
Sbjct: 50 LVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVS 109
Query: 155 L-----VKDCPHSVDVFQDLISCTEDCN-WAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
+ V D S +V + D W YVK L+ + F K + G P + +C
Sbjct: 110 VKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNC 169
Query: 209 NFLLNGLL-KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N +L L + N ID +VY M GICP T+N + FCK G V + L +++
Sbjct: 170 NRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQ 229
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G P+ VTYN L++ G + A L + M R + + TY L+ G C++G++
Sbjct: 230 AMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIE 289
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +L M+ RG P +V+YNT+++ CK G++ +++ LL M+ + PD + ++
Sbjct: 290 EASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 349
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + G + A L EL+ ++ S Y+ LI LC+ A L + + + G
Sbjct: 350 YGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPD 409
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + + + CK ++ A L DEM++R ++P Y I +G +A +
Sbjct: 410 PDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGM 469
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+EML G PD V I+G ++ +A L+ + D +Y ++ +
Sbjct: 470 QEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLM 529
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G L K L L G P+ +T +IHS
Sbjct: 530 AGHLRKARALFLEMLSKGIFPSVVTYTVLIHS 561
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 231/462 (50%), Gaps = 16/462 (3%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTFRKTLD 198
++ L++D +++DV +++ + +C ++ K G+++E+ + +
Sbjct: 171 RVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQA 230
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G P+ V+ N L+NGL ++Q ++ ++M R+G+ + +T++ L +C+ G +++
Sbjct: 231 MGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEE 290
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ E++ G P +VTYNT++ CK GR++DA L +M +N++PDLV+Y TL+
Sbjct: 291 ASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIY 350
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G + G + EA LF + +R L+P +V+YNTLI C+ G + + L EM+ +G P
Sbjct: 351 GYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDP 410
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D FT V+G+ K G L A L E+ G+ R Y IV + P A +
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + G+ P L YN ++ L K ++ +A L +M+ + P TY ++I
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA--KKFQIYDTE 556
G +A +L EML G+ P VLI+ Y + + A+L FF +K +
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKL--AILHFFEMHEKGVHPNVI 588
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+YNA+ N + + + G +PN T +I+
Sbjct: 589 TYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN 630
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 181/369 (49%), Gaps = 9/369 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y I++ L + S A K+L D + ++ DL+S + Y ++
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLL--------DVMVNKNLMPDLVSYNT-LIYGYTRL 355
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+F F + PS+V+ N L++GL +L +D ++ +EM + G P+ TF
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
FCK G++ +++ G PD Y T I K G + AF + M
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R PDL+TY ++GL K G ++EA +L +M++ GL PD V+Y ++I A+ G +++
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 535
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+++L EM+ GI+P T +++ Y GRL A+ E+ GV + Y+ LI
Sbjct: 536 ARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 595
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ + A + + G P+ Y L+ C +AL L +M+DR I+P
Sbjct: 596 GLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 655
Query: 484 SLSTYRALI 492
T+R+L+
Sbjct: 656 DSCTHRSLL 664
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 188/408 (46%), Gaps = 9/408 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++V+ L+ + + A +++ +++ L + SV + LI Y +
Sbjct: 235 PNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEV--SVYTYDPLIR-------GYCEK 285
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ + + L G P++V+ N ++ GL K + ++ + M + P+ ++
Sbjct: 286 GQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSY 345
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + + + G++ + ++ P +VTYNTLI C+ G L+ A L M +
Sbjct: 346 NTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIK 405
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD+ T+TT + G CK G + A +LF M++RGL PD +Y T I K G +
Sbjct: 406 HGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 465
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + EM+ G PD T + + G K G L A LV ++ G+ Y +I
Sbjct: 466 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIH 525
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A A +L + G PS+ Y L+ S + A+L EM ++ + P
Sbjct: 526 AHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHP 585
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
++ TY ALI C + + +A + EM G+ P+ +LIN C
Sbjct: 586 NVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC 633
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 129/247 (52%), Gaps = 8/247 (3%)
Query: 158 DCPHSVDVFQDLIS-CTEDCNWAYV-------KVGLIRESFKTFRKTLDVGFQPSIVSCN 209
+ P + ++F ++++ + +AY+ K+G ++F + L GF P +++ N
Sbjct: 427 NLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYN 486
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
++GL KL + + ++ ++M G+ P+ T+ + H G + K ++ +
Sbjct: 487 VFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK 546
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G P +VTY LI SY +GRL A + M+ + V P+++TY L+NGLCK K+ +A
Sbjct: 547 GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQA 606
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ F M +G+SP+ +Y LI C G QE+ L +M+ I PD+ T + +++
Sbjct: 607 YNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKH 666
Query: 390 YGKEGRL 396
K+ +L
Sbjct: 667 LNKDYKL 673
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 190/463 (41%), Gaps = 86/463 (18%)
Query: 136 LAWNNKFSFAM-----KMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESF 190
L +NNKF F K+L ++ V++ P + WA
Sbjct: 32 LQYNNKFLFHAAVAEPKLLVRVLNTVRNRP---------VVALRFFRWAE---------- 72
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
R+T GF+ S +S + +L+ L + + + V E+ + V
Sbjct: 73 ---RQT---GFKRSEISYSVILDILARNGLMRSAYCVMEK---------------VVSVK 111
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+NG +D V+ E + + L+ Y KK L ++ M + +LPD+
Sbjct: 112 MENGVIDVVSS-----SEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDV 166
Query: 311 VTYTTLMNGLC-KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
++ L ++ + A ++++ MV G+ P +V+YNT++ ++CK+G +QE+ LL+
Sbjct: 167 KNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLF 226
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M G P+ T ++V G G + A L+ ++ R G+ +S YD LI
Sbjct: 227 QMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLI------- 279
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
GY C+ + +A L +EM+ R P++ TY
Sbjct: 280 --------------RGY--------------CEKGQIEEASRLGEEMLSRGAVPTVVTYN 311
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
++ C GR +A L+D M+ ++PD LI GY ++ +A L +
Sbjct: 312 TIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYR 371
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+YN + + GDL M L+ ++ G P+ T
Sbjct: 372 SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFT 414
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 96/186 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G ++E+ + +K L G P V+ +++ L + + ++ EM GI P+
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L H + G + ++ E+G P+++TYN LI+ CK +++ A+ + M
Sbjct: 554 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P+ TYT L+N C G +EA +L+ M+ R + PD ++ +L+ K+ K+
Sbjct: 614 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL 673
Query: 362 QESKSL 367
+ L
Sbjct: 674 HVVRHL 679
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y I+H A + E++ S +F +++ T + +Y
Sbjct: 515 PDHVTYTSIIHAHLMAGHLRKARALFLEML--------SKGIFPSVVTYTVLIH-SYAVR 565
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + F + + G P++++ N L+NGL K+ +DQ + + EM GI PN +T+
Sbjct: 566 GRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTY 625
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL + C G + + + + PD T+ +L+ LN + L+ + +
Sbjct: 626 TILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK------HLNKDYKLHVVRHL 679
Query: 304 RNVL 307
NV+
Sbjct: 680 ENVI 683
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 204/412 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + GL + + F G + + LL GL + + V+ M G P
Sbjct: 118 GYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAP 177
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++H ++I+ H C G + L +GF P++ YN LI YC G L A ++
Sbjct: 178 DSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIF 237
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + LP++ TYT L+ G CK GKV A L+ RM+ GL+P++V+Y TLI C E
Sbjct: 238 KGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSE 297
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + LL+ M G+ P+ +TC +++ K GR+ A + L + G+ +++ IY
Sbjct: 298 GHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIY 357
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I ALC+ + A +L+++I +G+VP +Y+ L++ LC+ + + +A+ L ++M++
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIE 417
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ + + LI RS + D M +G+ PD V I YC + +
Sbjct: 418 SGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMED 477
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
AE+++ + +YN + +A G +S+ K + G PN+
Sbjct: 478 AESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPND 529
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 198/479 (41%), Gaps = 93/479 (19%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K C +V + LI + K G + + + + ++ G P++V+ L+ G
Sbjct: 243 KGCLPNVRTYTQLIC-------GFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQC 295
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
++ +++ M G+ PN T +L CK+G +++ FL + ++G + V
Sbjct: 296 SEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQV 355
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH-- 334
Y ++I + CK G+ + A L + + +PD Y++L++GLC+E K+ EA L +
Sbjct: 356 IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415
Query: 335 ---------------------------------RMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RM G+ PD+V+Y I +YC++G+M
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN-------------------- 401
++++S++ +M+ +G+ P+ T +++GY G + A +
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535
Query: 402 -------------------------------LVVELQRFGVSISRDIYDYLIVALCQDNR 430
L+ E+ + S + +YD I L + +R
Sbjct: 536 LGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDR 595
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A S L + PS ++Y ++E + + +AL D MV RN P L +YR
Sbjct: 596 LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRF 655
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+IC C G A S+ ++L D ++LI+G + + LL F ++
Sbjct: 656 IICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQ 714
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 151/359 (42%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N HT+ L + +C GD+ L + G PD Y + + YC+ G A L+
Sbjct: 73 NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M +R TY L+ GLC G VREA +F M G +PD Y+ ++ C
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ E+ +LL + MG G P+ ++ GY G L A+++ +Q G + Y
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ + A L R+ + G P++ Y L++ C + A L M
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P+ T LI C GR EA + +++ G+ + I +I+ C +
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDG 372
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A L+ + + D Y+++ + + L + + L + G N + +I
Sbjct: 373 AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 118/293 (40%), Gaps = 39/293 (13%)
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+P + TL+ L + G + + L RM R L +Y TLI AYC G + +K
Sbjct: 40 VPPIRCLNTLLMALARHGMLSDMESLAARMPVRNLH----TYTTLINAYCHAGDLPAAKR 95
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L ++ G+ PD+ V GY + G A L + + + G +
Sbjct: 96 HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCA-------------- 141
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
PF Y L++ LC V +A+ + M P
Sbjct: 142 --RTPFT-------------------YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSH 180
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
Y ++ CG GR+GEAV+L+ + + G +P+ + LI+GYC D+ A +
Sbjct: 181 VYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM 240
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
K + + +Y + F + G + + M L R + G APN +T +I
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQG 293
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 160/425 (37%), Gaps = 86/425 (20%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +F+ G P+ +C L++ L K I++ Q + + GI N +
Sbjct: 298 GHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIY 357
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ CK+G D + ++KI EGF PD Y++LI C++ +L +A L M
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIE 417
Query: 304 RNVL-----------------------------------PDLVTYTTLMNGLCKEGKVRE 328
V PD+VTYT + C++G++ +
Sbjct: 418 SGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMED 477
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD--------- 379
A + +M+ G+ P++ +YNTLI Y G + ++ S L M+ NG P+
Sbjct: 478 AESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLG 537
Query: 380 ------------------------------------------TFTCQIIVQGYGKEGRLL 397
++ ++ K RL
Sbjct: 538 LLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLE 597
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A + +V +Q ++ S D+Y +I + A L+ + + Y+P LE Y ++
Sbjct: 598 EAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFII 657
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+LC+ S A + +++ + ++ LI G + + L+ M E
Sbjct: 658 CALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCR 717
Query: 518 PDSQI 522
P S I
Sbjct: 718 PGSAI 722
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 225/448 (50%), Gaps = 10/448 (2%)
Query: 154 ELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
E+ K C VF D+++ + A + G + + G +P IV+ N +L
Sbjct: 181 EMEKRC-----VFPDVVTHNVMVD-ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLK 234
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GL + D+ W+V++EM G+ P+ +F IL FC+ G++++ +++ G P
Sbjct: 235 GLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKP 294
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DLV+++ LI + ++G+++ A R M ++PD V YT ++ G C+ G + +A ++
Sbjct: 295 DLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVR 354
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
MV G PD+V+YNTL+ CKE ++ +++ LL EM G+ PD T ++ GY E
Sbjct: 355 DEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 414
Query: 394 GRLLSALNLVVEL--QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G+L AL L + QR I Y+ LI +C+ A L + + P+
Sbjct: 415 GKLDKALQLFDTMLNQRLRPDIV--TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 472
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y+ L++S C+ V DA DEM+++ I P++ TY ++I +C G + + +M
Sbjct: 473 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 532
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ + + PD LI+GY E ++ A LL K+ D +YN + N F+ G++
Sbjct: 533 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 592
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + ++ G P+ T MI+
Sbjct: 593 QEAGWIFEKMCAKGIEPDRYTYMSMING 620
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 207/409 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G+ ++++ F++ D G P + S L+ G ++ I++ ++Y+EM GI P+
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLV 297
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+F+ L +F + G +D +L ++ G PD V Y +I +C+ G ++DA + M
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LPD+VTY TL+NGLCKE ++ +A L + M RG+ PD+ ++ TLI YC EGK+
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L M+ + PD T ++ G ++G L A +L ++ + + Y L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + C+ + A L+ + G +P++ YN +++ C+ +V+ +M+ +
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P L TY LI + + +A L++ M + + PD +LING+ + +V +A
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ K D +Y ++ N G+ + +L L+ GFAP++
Sbjct: 598 IFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 195/396 (49%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N +++ K D+ V EM + + P+ T N++ + GD + ++ +
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 217
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+G P +VTYN+++ C+ G + A+ +++ M V PD+ ++T L+ G C+ G++
Sbjct: 218 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 277
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA +++ M HRG+ PD+VS++ LI + + GKM + + L EM G+ PD ++
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ + G + AL + E+ G Y+ L+ LC++ R A LL + + G
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L + L+ C + AL L D M+++ ++P + TY LI C G +A
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L D+M + P+ +LI+ +C + V A L K + + +YN++ +
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++SK + ++ + +P+ +T +IH K
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 553
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 175/342 (51%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G + + R+ G P V ++ G + + +V +EM G P+
Sbjct: 306 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 365
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L + CK + G L ++ E G PDL T+ TLI YC +G+L+ A L+
Sbjct: 366 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 425
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+VTY TL++G+C++G + +A+ L+ M R + P+ V+Y+ LI ++C++G
Sbjct: 426 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 485
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++++ L EM+ GI P+ T I++GY + G + + ++ VS Y+
Sbjct: 486 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 545
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI ++++ A LL + ++ P + YN L+ +V +A + ++M +
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
I+P TY ++I G S EA L DEML+ G PD +
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 133/303 (43%)
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
YR+++ N + T +++ CK + + + M R + PD+V++N ++ A +
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + +L+ M+ G+ P T +++G + G A + E+ FGV+
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ LI C+ A + + + G P L ++ L+ + + A+ EM
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P Y +I FC G +A+ + DEM+ G LPD L+NG C E+ +
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AE LL ++ D ++ + + + +G L K ++L L P+ +T +I
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 443
Query: 598 HSL 600
+
Sbjct: 444 DGM 446
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ LI +Y + + +AF +R++ V L+ L + G A
Sbjct: 84 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 143
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ + + + N ++ YCK + + +++ EM ++PD T ++V +
Sbjct: 144 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 203
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ LV + G+ Y+ ++ LC+ A + + + G P +
Sbjct: 204 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 263
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L+ C+ + +AL + EM R IKP L ++ LI F G+ A++ + EM
Sbjct: 264 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 323
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G++PD I ++I G+C ++ A + + D +YN + N ++ L
Sbjct: 324 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 383
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
L G P+ T +IH
Sbjct: 384 DAEGLLNEMRERGVPPDLCTFTTLIHG 410
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
HS ++F + ++ + + ++ + G + ++F + ++ G P+I++ N ++ G +
Sbjct: 463 HSREIFPNHVTYSILID-SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 521
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + + ++M + P+ T+N L H + K + L +E+E PD+VTYN
Sbjct: 522 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 581
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ + G + +A +++ M + + PD TY +++NG G +EA QL M+ RG
Sbjct: 582 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Query: 341 LSPD 344
+PD
Sbjct: 642 FAPD 645
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 205/403 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS ++NG K D+ + Y EM GI P+ T+N + CK +DK
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G PD +TYN+++ YC G+ +A + M V PD+VTY+ LM+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL P+I +Y TL+ Y +G + E LL M+ NGI+PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ I++ Y K+G++ A+ + ++++ G++ + Y +I LC+ R A E
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P +YN L+ LC C+ A L EM+DR I + + ++I C G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L + M+ G+ P+ LINGYC+ +++A LL +T +Y+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + + + + L K G +P+ +T ++ L++
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 214/435 (49%), Gaps = 1/435 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++S T N + K G +++ T+ + LD G P +V+ N ++ L K +D+ +V
Sbjct: 195 DVVSYTTVIN-GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M + G+ P+ T+N + H +C +G + GFL+K+ +G +PD+VTY+ L+ CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR +A ++ M +R + P++ TY TL+ G +G + E H L MV G+ PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
++ LI AY K+GK+ ++ + +M G+ P+ T ++ K GR+ A+ ++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G+S +Y+ LI LC N+ A L+ + G + +N +++S CK V
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ L + MV +KP++ TY LI +C G+ EA+ L+ M+ G+ P++ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
NGYC + A L D +YN + + + EL R G
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 588 PNNLTCKYMIHSLWK 602
T ++H L K
Sbjct: 614 IELSTYNIILHGLCK 628
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 175/380 (46%), Gaps = 35/380 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ +
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+IL + K G VD+ K+ ++G +P+ VTY +I CK GR+ DA + M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P + Y +L++GLC KEG+V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ P++++YNTLI YC GKM E+ LL M+ G+ P+T T +
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K R+ AL L E++ GVS Y+ ++ L Q R AA L RI + G
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK DAL + + ++K T+ +I +GR+ EA
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 507 LMDEMLESGMLPDSQICRVL 526
L +G++P+ R++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM 692
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 204/464 (43%), Gaps = 47/464 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGI 236
+ G + F + GF+ ++ LL GL C D+ V M +G
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTELGC 154
Query: 237 CPNTHTFNILTHVFC--------------------------------------KNGDVDK 258
PN ++NIL C K GD DK
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ + G PD+VTYN++I++ CK ++ A + M + V+PD +TY ++++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G C G+ +EA +M G+ PD+V+Y+ L+ CK G+ E++ + M G+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++QGY +G L+ L+ + R G+ ++ LI A + + A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ Q G P+ Y ++ LCK V DA+L ++M+D + P Y +LI C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+ A L+ EML+ G+ ++ +I+ +C E V ++E L + + +Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + N + G + + M+L + +G PN +T +I+ K
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P+ T+ IL C+ G +D L + ++GF D + + L+
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M +P++ +Y L+ GLC E + +EA +L H M G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+VSY T+I + KEG ++ S +EM+ GI PD T I+ K + A+
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV Y+ ++ C +P A L+++ DG P + Y+ LM+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R +KP ++TY L+ + G E L+D M+ +G+ PD
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y + V++A + ++ + +Y AV + + G + M ++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G +P N+ +IH L
Sbjct: 432 MIDEGLSPGNIVYNSLIHGL 451
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 216/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ DC +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH--------- 274
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ + L++ L K + ++++ M + G+
Sbjct: 275 --GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G PD ++ LI +Y K+G+++ A
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + P+ VTY ++ LCK G+V +A F +M+ GLSP + YN+LI C
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K + ++ L+ EM+ GI +T I+ + KEGR++ + L + R GV +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVI 512
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + A LL + G P+ Y+ L+ CK + DAL+L EM
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C K
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ A + + ++N + + + G + +L F G PN T + M
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 597 IHSL 600
++
Sbjct: 693 AENI 696
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 182/387 (47%), Gaps = 21/387 (5%)
Query: 64 LICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
LIC+ K+G +L Q L P GA + + C+S V A+ +F +
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA----VIGILCKSGRVEDAMLYFEQM 432
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
D + P + Y ++H L NK+ A +++ E+++ C +++ F +I
Sbjct: 433 I-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTI-FFNSIID----- 484
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ K G + ES K F + +G +P++++ N L+NG +D+ ++ M +G+
Sbjct: 485 --SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PNT T++ L + +CK ++ +++E G PD++TYN ++ + R A
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
LY + +L TY +++GLCK +A Q+F + L + ++N +I A
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+K L NG+ P+ +T +++ + +G L L + ++ G ++
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQ 443
+ ++++ L Q A + L I +
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDE 749
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 207/422 (49%), Gaps = 15/422 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + + I+ +A AM L + C +V + LI+ A+ +
Sbjct: 23 PDAFTHTPIITAMANAGDLDGAMDHLRSM-----GCDPNVVTYTALIA-------AFARA 70
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ K + + G P++V+ N L++ L KL+ + V ++M G PN TF
Sbjct: 71 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 130
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L FCK G+VD L + +G P++VTY+ LI CK + +A + M
Sbjct: 131 NSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKA 190
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V PD TY+ L++GLCK K+ EA Q+ RM G +PD+V Y+++I A+CK GK+ E
Sbjct: 191 SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 250
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYL 421
++ L EM PD T ++ G K G++ A ++ ++Q G + D+ Y +
Sbjct: 251 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG-DVLPDVVTYSTV 309
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A LL+R+ + G P + Y +++ LCKC + +A L M
Sbjct: 310 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 369
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY LI C + EA +M+EM +G P+ ++NG C+ + +A+
Sbjct: 370 APNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQ 429
Query: 542 LL 543
L+
Sbjct: 430 LV 431
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 209/406 (51%), Gaps = 3/406 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G P++V+ L+ + +++ ++ EEM G PN T+N+L CK V
Sbjct: 51 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 110
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++K+ E GF P+++T+N+L+ +CK+G ++DA L IM + + P++VTY+ L++
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK K EA ++ M G++PD +Y+ LI CK K++E++ +L M G+G P
Sbjct: 171 GLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 230
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D I+ + K G+LL A + E+++ S Y+ +I LC+ + A +L
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVIL 290
Query: 439 ERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+++ + G V P + Y+ ++ LCK D + +A L D M P + TY +I C
Sbjct: 291 DQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCK 350
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
GR EA L+ M +G P+ LI+G C + V++AE ++ + +
Sbjct: 351 CGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVT 410
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFL--RLGFAPNNLTCKYMIHSLW 601
YN + N G + + +L +R R +P+ T + ++++L
Sbjct: 411 YNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 456
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 4/380 (1%)
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ EEM G P+ T + GD+D G ++ + G DP++VTY LI++
Sbjct: 10 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLD---GAMDHLRSMGCDPNVVTYTALIAA 66
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+ + +L +A L M R P+LVTY L++ LCK V A + +M+ G +P+
Sbjct: 67 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 126
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
++++N+L+ +CK G + +++ LL M+ G+ P+ T ++ G K + L A ++
Sbjct: 127 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E++ GV+ Y LI LC+ ++ A +L R+ G P + +Y+ ++ + CK
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQIC 523
+ +A EM + P + TY +I C +G+ EA ++D+M ESG +LPD
Sbjct: 247 KLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTY 306
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+ING C + +A+ LL K D +Y + + + G L + L + R
Sbjct: 307 STVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 366
Query: 584 LGFAPNNLTCKYMIHSLWKG 603
G APN +T +I L K
Sbjct: 367 AGCAPNVVTYTTLISGLCKA 386
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 135/288 (46%), Gaps = 47/288 (16%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + Y ++H L +K A +ML + C V V+ +I A+
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG--SGCTPDVVVYSSII-------HAFC 243
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNT 240
K G + E+ KT ++ P +V+ N +++GL KL I + + ++M G + P+
Sbjct: 244 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDV 303
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T++ + + CK+ + + L+++ + G +PD+VTY T+I CK GRL +A YL +
Sbjct: 304 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 363
Query: 301 MYRRNVLPDLVTYTTLMNGLCK-----------------------------------EGK 325
M R P++VTYTTL++GLCK G+
Sbjct: 364 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 423
Query: 326 VREAHQLFHRMV--HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
++EA QL RM SPD +Y T++ A +QE++ LL +M
Sbjct: 424 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 225/448 (50%), Gaps = 10/448 (2%)
Query: 154 ELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
E+ K C VF D+++ + A + G + + G +P IV+ N +L
Sbjct: 120 EMEKRC-----VFPDVVTHNVMVD-ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLK 173
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GL + D+ W+V++EM G+ P+ +F IL FC+ G++++ +++ G P
Sbjct: 174 GLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKP 233
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DLV+++ LI + ++G+++ A R M ++PD V YT ++ G C+ G + +A ++
Sbjct: 234 DLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVR 293
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
MV G PD+V+YNTL+ CKE ++ +++ LL EM G+ PD T ++ GY E
Sbjct: 294 DEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 353
Query: 394 GRLLSALNLVVEL--QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G+L AL L + QR I Y+ LI +C+ A L + + P+
Sbjct: 354 GKLDKALQLFDTMLNQRLRPDIV--TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHV 411
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y+ L++S C+ V DA DEM+++ I P++ TY ++I +C G + + +M
Sbjct: 412 TYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKM 471
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ + + PD LI+GY E ++ A LL K+ D +YN + N F+ G++
Sbjct: 472 MVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 531
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + ++ G P+ T MI+
Sbjct: 532 QEAGWIFEKMCAKGIEPDRYTYMSMING 559
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 195/396 (49%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N +++ K D+ V EM + + P+ T N++ + GD + ++ +
Sbjct: 97 TLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSM 156
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+G P +VTYN+++ C+ G + A+ +++ M V PD+ ++T L+ G C+ G++
Sbjct: 157 VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEI 216
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA +++ M HRG+ PD+VS++ LI + + GKM + + L EM G+ PD ++
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ + G + AL + E+ G Y+ L+ LC++ R A LL + + G
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L + L+ C + AL L D M+++ ++P + TY LI C G +A
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L D+M + P+ +LI+ +C + V A L K + + +YN++ +
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++SK + ++ + +P+ +T +IH K
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 492
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 172/336 (51%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G + + R+ G P V ++ G + + +V +EM G P+
Sbjct: 245 FARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPD 304
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L + CK + G L ++ E G PDL T+ TLI YC +G+L+ A L+
Sbjct: 305 VVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFD 364
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+VTY TL++G+C++G + +A+ L+ M R + P+ V+Y+ LI ++C++G
Sbjct: 365 TMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKG 424
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++++ L EM+ GI P+ T I++GY + G + + ++ VS Y+
Sbjct: 425 QVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYN 484
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI ++++ A LL + ++ P + YN L+ +V +A + ++M +
Sbjct: 485 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
I+P TY ++I G S EA L DEML+ G
Sbjct: 545 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 133/303 (43%)
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
YR+++ N + T +++ CK + + + M R + PD+V++N ++ A +
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + +L+ M+ G+ P T +++G + G A + E+ FGV+
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ LI C+ A + + + G P L ++ L+ + + A+ EM
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P Y +I FC G +A+ + DEM+ G LPD L+NG C E+ +
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AE LL ++ D ++ + + + +G L K ++L L P+ +T +I
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLI 382
Query: 598 HSL 600
+
Sbjct: 383 DGM 385
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ LI +Y + + +AF +R++ V L+ L + G A
Sbjct: 23 PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ + + + N ++ YCK + + +++ EM ++PD T ++V +
Sbjct: 83 YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +A+ LV + G+ Y+ ++ LC+ A + + + G P +
Sbjct: 143 AGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRS 202
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L+ C+ + +AL + EM R IKP L ++ LI F G+ A++ + EM
Sbjct: 203 FTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR 262
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G++PD I ++I G+C ++ A + + D +YN + N ++ L
Sbjct: 263 CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLL 322
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
L G P+ T +IH
Sbjct: 323 DAEGLLNEMRERGVPPDLCTFTTLIHG 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
HS ++F + ++ + + ++ + G + ++F + ++ G P+I++ N ++ G +
Sbjct: 402 HSREIFPNHVTYSILID-SHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 460
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + + ++M + P+ T+N L H + K + L +E+E PD+VTYN
Sbjct: 461 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNM 520
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ + G + +A +++ M + + PD TY +++NG G +EA QL M+ RG
Sbjct: 521 LINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 201/402 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS N +LNG K D+ + Y EM GI P+ T++ + CK +DK
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G PD +TYN+++ YC G+ +A + M V P++VTY++LMN
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL PDI +Y TL+ Y +G + E +LL M+ NGI PD
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ Y K+ ++ A+ + ++++ G++ + Y +I LC+ A E
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P++ +Y L+ LC CD A L EM+DR I + + ++I C G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L D M+ G+ PD LI+G C+ +++A LL D +Y
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ N + + + L K + G +PN +T ++ L+
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 204/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G +++ T+ + LD G P +V+ + ++ L K +D+ +V M + G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + H +C +G + G L+K+ +G +P++VTY++L++ CK GR +A ++
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R + PD+ TY TL+ G +G + E H L MV G+ PD +N LI AY K+
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ ++ + +M +G+ P+ ++ K G + A+ ++ G++ + +Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC ++ A L+ + G + +N +++S CK V ++ L D MV
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KP + TY LI C G+ EA L+ M+ G+ PD LINGYC ++
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A AL + +YN + + EL + G T ++H
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629
Query: 599 SLWK 602
L K
Sbjct: 630 GLCK 633
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P HT+ IL C+ G +D L + ++GF D +T+ L+
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M +PD+ +Y L+ GLC E + +EA +L H M G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+VSYNT++ + KEG ++ S +EM+ GI PD T I+ K + A+
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV Y+ ++ C +P A L+++ DG P++ Y+ LM L
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R ++P ++TYR L+ + G E +L+D M+ +G+ PD
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y ++ V++A + + + Y V ++ + G + M ++
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G PN + +IH L
Sbjct: 437 MIDEGLTPNIIVYTSLIHGL 456
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 189/427 (44%), Gaps = 35/427 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ H
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNIL + K VD+ K+ + G +P++V Y T+I CK G ++DA + M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P+++ YT+L++GLC KEG+V
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ PDI++YNTLI C GKM E+ LL M+ G+ PD T +
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + R+ AL L E+ GVS + Y+ ++ L R AA L I + G
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK + +AL + + +++ T+ +I GR EA
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L +G++PD + ++ + + + + L + D+ N++
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737
Query: 567 EDGDLSK 573
+ GD+++
Sbjct: 738 QRGDITR 744
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 217/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ DC +
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH--------- 279
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ T +K G +P++V+ + L+N L K + ++++ M + G+
Sbjct: 280 --GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T+ L + G + +++ L+ + G PD +N LI +Y K+ +++ A
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M + + P++V Y T+++ LCK G V +A F +M+ GL+P+I+ Y +LI C
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K +++ L+ EM+ GI +T I+ + KEGR++ + L + R GV
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + AT LL + G P + Y L+ C+ + DAL L EM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V + P++ TY ++ R+ A L + +SG + ++++G C
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 637
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + + +L G P+ T M
Sbjct: 638 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 697
Query: 597 IHSL 600
+L
Sbjct: 698 AENL 701
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 2/384 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K + ++ F K G P++V +++ L K +D +E+M G+ P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + L H C DK + ++ + G + + +N++I S+CK+GR+ ++ L+
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R V PD++TY TL++G C GK+ EA +L MV G+ PDIV+Y TLI YC+
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+M ++ +L EM+ +G+ P+ T II+QG R +A L V + + G + Y
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ LC++N A + + + +N ++ +L KC + +A L
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P + TY + G E L M E+G DS++ ++ D+ +
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 744
Query: 539 AEALLGFFAKKFQIYDTESYNAVF 562
A L +K + E+ A F
Sbjct: 745 AGTYLFMIDEKH--FSLEASTASF 766
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 156/327 (47%), Gaps = 11/327 (3%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S SV A+ +F + D + P Y ++H L +K+ A +++ E+++ C
Sbjct: 422 CKSGSVDDAMLYFEQMI-DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR-GICL 479
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+++ F +I ++ K G + ES K F + +G +P I++ N L++G
Sbjct: 480 NTI-FFNSIID-------SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++ M +G+ P+ T+ L + +C+ +D +++ G P+++TYN
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ R A LY + + +L TY +++GLCK EA ++F +
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L + ++N +I A K G+M E+K L NG+ PD T ++ + ++G L
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQ 427
+L + ++ G S + + ++ L Q
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQ 738
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 6/281 (2%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE-SKSLLYEMMGNG-IYPDTFTCQI 385
+A +F ++ RG I N + + S+ G G + P T I
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAI 97
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL-LERIGQD 444
++ + GRL + + + G + + L+ LC D R A + L R+ +
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR---NIKPSLSTYRALICCFCGIGRS 501
G +P + YN L++ LC + +AL L M D P + +Y ++ F G S
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A S EML+ G+LPD +I C + ++KA +L K + D +YN++
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G + + K+ G PN +T +++ L K
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 201/402 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS N +LNG K D+ + Y EM GI P+ T++ + CK +DK
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G PD +TYN+++ YC G+ +A + M V P++VTY++LMN
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL PDI +Y TL+ Y +G + E +LL M+ NGI PD
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ Y K+ ++ A+ + ++++ G++ + Y +I LC+ A E
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFE 435
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P++ +Y L+ LC CD A L EM+DR I + + ++I C G
Sbjct: 436 QMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 495
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L D M+ G+ PD LI+G C+ +++A LL D +Y
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ N + + + L K + G +PN +T ++ L+
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 204/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G +++ T+ + LD G P +V+ + ++ L K +D+ +V M + G+ P
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + H +C +G + G L+K+ +G +P++VTY++L++ CK GR +A ++
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R + PD+ TY TL+ G +G + E H L MV G+ PD +N LI AY K+
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ ++ + +M +G+ P+ ++ K G + A+ ++ G++ + +Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC ++ A L+ + G + +N +++S CK V ++ L D MV
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KP + TY LI C G+ EA L+ M+ G+ PD LINGYC ++
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A AL + +YN + + EL + G T ++H
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629
Query: 599 SLWK 602
L K
Sbjct: 630 GLCK 633
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P HT+ IL C+ G +D L + ++GF D +T+ L+
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M +PD+ +Y L+ GLC E + +EA +L H M G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+VSYNT++ + KEG ++ S +EM+ GI PD T I+ K + A+
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV Y+ ++ C +P A L+++ DG P++ Y+ LM L
Sbjct: 257 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 316
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R ++P ++TYR L+ + G E +L+D M+ +G+ PD
Sbjct: 317 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDH 376
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y ++ V++A + + + Y V ++ + G + M ++
Sbjct: 377 HVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQ 436
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G PN + +IH L
Sbjct: 437 MIDEGLTPNIIVYTSLIHGL 456
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 189/427 (44%), Gaps = 35/427 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ H
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNIL + K VD+ K+ + G +P++V Y T+I CK G ++DA + M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P+++ YT+L++GLC KEG+V
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ PDI++YNTLI C GKM E+ LL M+ G+ PD T +
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + R+ AL L E+ GVS + Y+ ++ L R AA L I + G
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK + +AL + + +++ T+ +I GR EA
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L +G++PD + ++ + + + + L + D+ N++
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737
Query: 567 EDGDLSK 573
+ GD+++
Sbjct: 738 QRGDITR 744
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 217/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ DC +
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH--------- 279
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ T +K G +P++V+ + L+N L K + ++++ M + G+
Sbjct: 280 --GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGL 337
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T+ L + G + +++ L+ + G PD +N LI +Y K+ +++ A
Sbjct: 338 EPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAML 397
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M + + P++V Y T+++ LCK G V +A F +M+ GL+P+I+ Y +LI C
Sbjct: 398 VFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K +++ L+ EM+ GI +T I+ + KEGR++ + L + R GV
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + AT LL + G P + Y L+ C+ + DAL L EM
Sbjct: 518 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 577
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V + P++ TY ++ R+ A L + +SG + ++++G C
Sbjct: 578 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 637
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + + +L G P+ T M
Sbjct: 638 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 697
Query: 597 IHSL 600
+L
Sbjct: 698 AENL 701
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 2/384 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K + ++ F K G P++V +++ L K +D +E+M G+ P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + L H C DK + ++ + G + + +N++I S+CK+GR+ ++ L+
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R V PD++TY TL++G C GK+ EA +L MV G+ PDIV+Y TLI YC+
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+M ++ +L EM+ +G+ P+ T II+QG R +A L V + + G + Y
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ LC++N A + + + +N ++ +L KC + +A L
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P + TY + G E L M E+G DS++ ++ D+ +
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 744
Query: 539 AEALLGFFAKKFQIYDTESYNAVF 562
A L +K + E+ A F
Sbjct: 745 AGTYLFMIDEKH--FSLEASTASF 766
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 156/327 (47%), Gaps = 11/327 (3%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S SV A+ +F + D + P Y ++H L +K+ A +++ E+++ C
Sbjct: 422 CKSGSVDDAMLYFEQMI-DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR-GICL 479
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+++ F +I ++ K G + ES K F + +G +P I++ N L++G
Sbjct: 480 NTI-FFNSIID-------SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++ M +G+ P+ T+ L + +C+ +D +++ G P+++TYN
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 591
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ R A LY + + +L TY +++GLCK EA ++F +
Sbjct: 592 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L + ++N +I A K G+M E+K L NG+ PD T ++ + ++G L
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQ 427
+L + ++ G S + + ++ L Q
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQ 738
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 6/281 (2%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE-SKSLLYEMMGNG-IYPDTFTCQI 385
+A +F ++ RG I N + + S+ G G + P T I
Sbjct: 38 DARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAI 97
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL-LERIGQD 444
++ + GRL + + + G + + L+ LC D R A + L R+ +
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR---NIKPSLSTYRALICCFCGIGRS 501
G +P + YN L++ LC + +AL L M D P + +Y ++ F G S
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDS 217
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A S EML+ G+LPD +I C + ++KA +L K + D +YN++
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI 277
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G + + K+ G PN +T +++ L K
Sbjct: 278 LHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 197/403 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++ + N L+N LN + + V ++ ++G P+ TF L C G + +
Sbjct: 86 GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ +EGF P++VTY TLI+ CK G + A L R M + N PD+V YT++++
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDS 205
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF +MV +G+SPDI +Y +L+ A C + + +LL +M+ + I PD
Sbjct: 206 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 265
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG++ A +V + + GV Y L+ C + A + +
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 325
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G+ P + Y L+ CK + A+ L +EM + P TY L+ C +G
Sbjct: 326 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVG 385
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ G +PD +L++ C + +A ALL D + YN
Sbjct: 386 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYN 445
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G+L +L G P+ T MIH L K
Sbjct: 446 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCK 488
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 214/465 (46%), Gaps = 17/465 (3%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVD--VFQDLIS--CTEDCNWAYVKVGLIRESFKTFRK 195
N+ FA +L ++++L H D F LI C E G I E+ F K
Sbjct: 105 NRVGFAFSVLAKILKL----GHQPDPTTFTTLIRGLCVE---------GKIGEALHLFDK 151
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
+D GFQP++V+ L+NGL K+ ++ M + P+ + + CK+
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 211
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
V + ++ +G PD+ TY +L+ + C L M +LPD+V ++T
Sbjct: 212 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
+++ LCKEGKV EAH++ M+ RG+ PD+V+Y TL+ +C + +M E+ + M+ G
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD + ++ GY K ++ A+ L E+ R Y+ L+ LC R A
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+L + G +P L Y+ L++SLCK + +A+ L + N+ P + Y +I
Sbjct: 392 ALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G A L + G+ P ++I+G C +N+A L D
Sbjct: 452 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 511
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+YN + F ++ + + ++L + L GF+ + T ++ L
Sbjct: 512 CTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 181/389 (46%), Gaps = 4/389 (1%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N +D + + + P+ F L K V +++ G P++
Sbjct: 32 LHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV 91
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C R+ AF + + + PD T+TTL+ GLC EGK+ EA LF +
Sbjct: 92 YTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDK 151
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P++V+Y TLI CK G + LL M PD I+ K+ +
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 211
Query: 396 LLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A NL Q G IS DI+ Y L+ ALC T+LL ++ +P + I+
Sbjct: 212 VTEAFNLFS--QMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ ++++LCK V +A + D M+ R ++P + TY L+ C EAV + D M+
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G PD LINGYC ++KA L +K I DT++YN + + G L
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + G P+ +T ++ SL K
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCK 418
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 160/339 (47%), Gaps = 9/339 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +VH L ++ +L ++V K P V +F ++ A
Sbjct: 227 ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN-SKILPDVV-IFSTVVD-------ALC 277
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + + G +P +V+ L++G + +D+ +V++ M R G P+
Sbjct: 278 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 337
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ L + +CK +DK E++ + + PD TYNTL+ C GRL DA L+ M
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM 397
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R +PDLVTY+ L++ LCK + EA L + L+PDI YN +I C+ G++
Sbjct: 398 VARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 457
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++ L + G++P +T I++ G K G L A L +E+ S Y+ +
Sbjct: 458 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 517
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
Q+N A LLE + G+ + L+E L
Sbjct: 518 ARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 35/242 (14%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K F + GF P ++S L+NG K++ ID+ ++EEM R P+T T+N L
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 378
Query: 248 H-----------------------------------VFCKNGDVDKVNGFLEKIEEEGFD 272
H CKN +++ L+ IE +
Sbjct: 379 HGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLN 438
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+ YN +I C+ G L A L+ + + + P + TY +++GLCK G + EA++L
Sbjct: 439 PDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F M SPD +YNT+ + + + + LL EM+ G D T ++V+
Sbjct: 499 FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSD 558
Query: 393 EG 394
+G
Sbjct: 559 DG 560
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-IDQCWQVYEEMGRIGICPNTH 241
VG ++++ F + + G P +V+ + LL+ L K NC +++ + + + + P+
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK-NCHLEEAMALLKAIEASNLNPDIQ 442
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+NI+ C+ G+++ + +G P + TYN +I CK+G LN+A L+ M
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD TY T+ G + + A QL M+ RG S D+ + L+ +G
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLD 562
Query: 362 QES 364
Q S
Sbjct: 563 QSS 565
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/448 (27%), Positives = 225/448 (50%), Gaps = 6/448 (1%)
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+ E+ K C VF D+++ + A + G + + + G +P IV+ N +
Sbjct: 180 ISEMEKRC-----VFPDVVTHNVLID-ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSV 233
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
L GL K D+ +V+ M + + P+ +FNIL FC+ G+V++ F +++++ G
Sbjct: 234 LKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGV 293
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD+V+++ LI + +G+++ A R M ++PD V YT ++ G C+ G + EA +
Sbjct: 294 TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALR 353
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ MV G PD+V+YNTL+ CK+ ++ +++ LL EM G+ PD T ++ GY
Sbjct: 354 VRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYC 413
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
++G AL L L + Y+ LI +C+ A L + + P+
Sbjct: 414 RDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV 473
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y+ L++S C+ V +A DEMV + P++ TY ++I +C G + + +M
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
++ +LPD LI+GY E++++ A + K+ D +YN + N F+E G++
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + K+ G P+ T +I+
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLING 621
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 201/412 (48%)
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ +R L + + + N +++ K D+ V EM + + P+ T N+L
Sbjct: 143 EAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDAR 202
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+ GDVD ++ + +G P +VT+N+++ CK R + A ++R M + +V PD+
Sbjct: 203 FRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDV 262
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
++ L+ G C+ G+V EA + + M RG++PD+VS++ LI + GKM + + L E
Sbjct: 263 RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLRE 322
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G G+ PD +++ G+ + G + AL + E+ G Y+ L+ LC+ +R
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A LL + + G P L + L+ C+ + AL L D ++ + ++P + Y +
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C G +A L D+M + P+ +LI+ +C + V +A L K
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +YN++ + G++ K + ++ ++ P+ +T +IH K
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/498 (25%), Positives = 232/498 (46%), Gaps = 24/498 (4%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKN 118
N +V C SL+ + + + + + + P + H + D +A+ + + N
Sbjct: 161 NIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMAN 220
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDC 176
+KP + ++ L + +F A E+ + C + DV F LI
Sbjct: 221 K-GLKPGIVTFNSVLKGLCKHRRFDKAK----EVFRAMDQCSVAPDVRSFNILIG----- 270
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ +VG + E+ K +++ G P +VS + L+ +D EM +G+
Sbjct: 271 --GFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGL 328
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ + ++ FC+ G + + +++ G PD+VTYNTL++ CK+ RL DA
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEE 388
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M R V PDL T+TTL++G C++G +A QLF ++H+ L PD+V+YN+LI C
Sbjct: 389 LLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMC 448
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
++G + ++ L +M I+P+ T I++ + ++G++ A + E+ G +
Sbjct: 449 RKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIM 508
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ +I C+ L+++ QD +P L +N L+ K +++ A + + M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM 568
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
++P TY +I F G EA + +M SG+ PD LING+ +
Sbjct: 569 EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNS 628
Query: 537 NKAEALLGFFAKKFQIYD 554
+A FQ++D
Sbjct: 629 KEA----------FQLHD 636
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 156/305 (51%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + E+ + + + +G P +V+ N LLNGL K + + ++ EM G+ P
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF L H +C++G+ +K + + + PD+V YN+LI C+KG L A L+
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R + P+ VTY+ L++ C++G+V EA MV +G P+I++YN++I YC+
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G +++ + L +MM + I PD T ++ GY KE + A N+ +++ V Y
Sbjct: 521 GNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTY 580
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I + A + +++G G P Y L+ + +A L DEM+
Sbjct: 581 NMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640
Query: 479 RNIKP 483
R P
Sbjct: 641 RGFAP 645
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 167/338 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + R+ +G P V ++ G + + + +V +EM +G P+ T+
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + CK + L +++E G PDL T+ TLI YC+ G A L+ +
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + PD+V Y +L++G+C++G + +A++L+ M R + P+ V+Y+ LI ++C++G+++E
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ G P+ T I++GY + G + + ++ + + ++ LI
Sbjct: 491 AFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIH 550
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
++ A ++ + ++ P YN ++ + ++ +A + +M I+P
Sbjct: 551 GYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEP 610
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
TY +LI G S EA L DEM+ G PD +
Sbjct: 611 DRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 140/327 (42%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ LI +Y + + +AF +R++ V L+ L + G A +
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ ++ + + N ++ +YCK + ++ +++ EM ++PD T +++ +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + +A+ LV + G+ ++ ++ LC+ R A + + Q P +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+ C+ V +A+ EM R + P + ++ LI F G+ A + + EM
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G++PD I ++I G+C +++A + + D +YN + N + L
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
EL G P+ T +IH
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTLIHG 411
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ + G + E+F + + G P+I++ N ++ G + + + Q ++M + I P
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN L H + K ++ +E+E PD VTYN +I+ + ++G + +A ++
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+ M + PD TY +L+NG G +EA QL M+HRG +PD
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 220/483 (45%), Gaps = 44/483 (9%)
Query: 162 SVDVFQDLISCTEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
S+DVF+ LI N + G + ++ T G P V+ N LLN
Sbjct: 192 SLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
+ + + + M R GI P T+N L F + G + + +E + GF+P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTLMNG------------- 319
DL TYN L C+ G++++AF L M R LPD+VTY TL++
Sbjct: 312 DLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRL 371
Query: 320 ----------------------LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
LCKEGK+ EA ++ GL+PD+++YNTLI AYCK
Sbjct: 372 LEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCK 431
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++ +L+ EM+G G+ DTFT ++ K R A L+ + G
Sbjct: 432 AGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVS 491
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y ++ A ++ P A L +++ + +PS+ YN L++ LC+ + + +A+ +E+V
Sbjct: 492 YGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELV 551
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ + P +TY +I +C G A ++M+E+ PD C L+NG C+ ++
Sbjct: 552 EKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLD 611
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L + +K + D +YN + + GD+ + G P+ T ++
Sbjct: 612 KALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVL 671
Query: 598 HSL 600
+L
Sbjct: 672 SAL 674
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 204/454 (44%), Gaps = 36/454 (7%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L + S FR +++ P+ + N L++ + M G+ P+ T+N
Sbjct: 188 LPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYN 247
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L + C+ G + + L +++ +G P TYNTL+S++ + G + A + M
Sbjct: 248 TLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAY 307
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAH---------------------------------- 330
PDL TY L GLC+ GKV EA
Sbjct: 308 GFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSD 367
Query: 331 --QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+L M +G+ P +V++N ++ + CKEGK++E+ L ++ G+ PD T ++
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
Y K G + A L+ E+ G+ + + ++ LC+ R A LL Q G+VP
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
Y +M + K + AL L D+M++R + PS+STY LI C + R EA+ +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+E++E G++PD ++I+ YC E D+ A + D + N + N
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L K ++L + ++ G + +T +I S+ K
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 204/439 (46%), Gaps = 38/439 (8%)
Query: 200 GFQPSIVSCNFLLNGLLK-LNCIDQC-WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
G +PS+ + N +L+ L + + + Q V+ + + + PN +TFN+L H C G +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
L ++ G PD VTYNTL++++C+KG L +A L M R + P TY TL+
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGI 376
+ + G +++A ++ M G PD+ +YN L C+ GK+ E+ L EM +
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTA 345
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD T +V K AL L+ E++ GV + ++ ++ +LC++ + A
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LE+I ++G P + YN L+++ CK +VA A L DEMV + +K T ++ C
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465
Query: 497 GIGRSGEAVSLM-----------------------------------DEMLESGMLPDSQ 521
+ R +A L+ D+M+E ++P
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI G C + + +A L +K + D +YN + + + ++GDL +
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ F P+ +TC +++ L
Sbjct: 586 VENSFKPDVVTCNTLMNGL 604
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 189/427 (44%), Gaps = 36/427 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K + G P +++ N L++ K + + + + +EM G+ +T
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T N + + CK + L + GF PD V+Y T++++Y K+ A L+ M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P + TY TL+ GLC+ +++EA + +V +GL PD +YN +I AYCKEG +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + +M+ N PD TC ++ G G+L AL L G + D+ Y
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV--DVITY- 632
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
N L++S+CK V AL D+M + +
Sbjct: 633 --------------------------------NTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P TY ++ GRS EA +++ ++ +SG L S C +L E DV + E
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720
Query: 542 LL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++K Q E+Y N G L + + ++ G ++ T ++ L
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780
Query: 601 WKGMERK 607
K +R+
Sbjct: 781 IKRQKRQ 787
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 191/438 (43%), Gaps = 30/438 (6%)
Query: 101 RCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKD 158
RC SD++ L D +KPT + ++V L K A+ L ++ E L D
Sbjct: 363 RCSSDALRLLEEMR----DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
V + LI AY K G + ++F + + G + + N +L L K+
Sbjct: 419 ----VITYNTLID-------AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ ++ + G P+ ++ + + K + + +++ E P + TY
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTY 527
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NTLI C+ RL +A + + ++PD TY +++ CKEG + A + ++MV
Sbjct: 528 NTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVE 587
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
PD+V+ NTL+ C GK+ ++ L + G D T ++Q K G + +
Sbjct: 588 NSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDT 647
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL+ +++ G+ Y+ ++ AL + R A ++L ++ G ++
Sbjct: 648 ALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-----KLSQSFAC 702
Query: 459 SLCKCDSVADALLLKD-------EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
L K S AD +K+ E ++ +L TY + C G+ EA +++DEM
Sbjct: 703 PLLKPSS-ADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761
Query: 512 LESGMLPDSQICRVLING 529
++ GM DS L+ G
Sbjct: 762 MQKGMPVDSSTYITLMEG 779
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 103/280 (36%), Gaps = 85/280 (30%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYV 181
P+ S Y ++ L + A+ L ELVE LV D + ++I AY
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPD-----ETTYNIII------HAYC 570
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL------------------------- 216
K G + +F+ K ++ F+P +V+CN L+NGL
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630
Query: 217 ----------KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
K+ +D +++M G+ P+ T+N++ + G ++ + L K+
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690
Query: 267 EEEGF------------------------------------DPDLVTYNTLISSYCKKGR 290
+ G D L TY ++ C G+
Sbjct: 691 ADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQ 750
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
L +A + M ++ + D TY TLM GL K K R+ H
Sbjct: 751 LKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK-RQTH 789
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 228/502 (45%), Gaps = 44/502 (8%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR-----ESFKTFRKT 196
++F + LC+ ++ ++D F+ + W + GL + E+ F K
Sbjct: 97 YNFVIHALCK----ARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKM 152
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
G P+ + N L+NG K++ + + + + +EM G+ PN T++ + H FC+ V
Sbjct: 153 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 212
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D ++ E G P+LVTYNTL+S C+ G +++A+ L M R + PD +Y TL
Sbjct: 213 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 272
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
M GLCK GK+ A ++F + PD+V+Y+TLI CK G++ E+ L +M N
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC 332
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD T ++ G K RL A ++ ++ + + Y LI LC+ + A
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 392
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+ +R+ G P++ YN L+ C + V ALLL +EM P + TY LI C
Sbjct: 393 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452
Query: 497 GIGRSGE-----------------------------------AVSLMDEMLESGMLPDSQ 521
GR+ E A +L D+ML+ +LPD
Sbjct: 453 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 512
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
L+ GYC V+ AE LL D +Y ++ + F + G + + + KR
Sbjct: 513 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
+ G PN +T +I + +
Sbjct: 573 AKRGCQPNVVTYTALIDAFCRA 594
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/487 (28%), Positives = 228/487 (46%), Gaps = 50/487 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P +Y ++ L K A+K+ + DCP V + LI+
Sbjct: 262 LQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN--GDCPPDVVAYSTLIA-------GLC 312
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K F K + +P +V+ L++GL K + + + QV E M PN
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L CK G V +++ G +P++VTYN+LI +C ++ A L M
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LPD++TY TL++GLCK G+ EA++LF M + +PD+++Y+ LI +CK ++
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
+++L +M+ + PD T +V+GY G + A L+ E+ S D+Y Y
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM--VASDCSPDVYTYT 550
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ C+ R A +L+R+ + G P++ Y L+++ C+ A L +EMV
Sbjct: 551 SLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGN 610
Query: 480 NIKPSLSTYRALICCFCGIG---------------------------------RSGE--- 503
++P++ TYR+LI FCG G R+G
Sbjct: 611 GVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSA 670
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAVF 562
A+ L++ + +SG P I LI G C K++ KA E L + + E+Y AV
Sbjct: 671 ALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730
Query: 563 NMFAEDG 569
A +G
Sbjct: 731 QELAREG 737
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 197/394 (50%), Gaps = 46/394 (11%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
++C +V + LI K G +R++ + F++ + G +P++V+ N L++G
Sbjct: 365 RNCTPNVITYSSLID-------GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFC 417
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN---------------- 260
N +D + EEM G P+ T+N L CK G + N
Sbjct: 418 MTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVI 477
Query: 261 -------GF--LEKIE----------EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
GF LE+I+ ++ PD+VT++TL+ YC G ++DA L M
Sbjct: 478 TYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD+ TYT+L++G CK G++ EA ++ RM RG P++V+Y LI A+C+ GK
Sbjct: 538 VASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKP 597
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL EM+GNG+ P+ T + ++ G+ G L A ++ L+R + D++ Y
Sbjct: 598 TVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLER-DENCKADMFAYR 656
Query: 422 IV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM-VD 478
++ LC+ R AA LLE I Q G P +IY L+ LC+ + A+ + +EM +
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
R +P+ Y A+I GR EA +L DE+L
Sbjct: 717 RKSRPNAEAYEAVIQELAREGRHEEANALADELL 750
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 32/423 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++ I E+ + G P++ + ++ GL K +D+ ++ EEM G P
Sbjct: 33 ALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVP 92
Query: 239 NTHTFNILTHVFCKNGDVDK--------------------VNG------------FLEKI 266
+ +N + H CK + K ++G + K+
Sbjct: 93 DAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKM 152
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+++G P+ TYN LI+ +CK +++ A+ L + M + P++VTY+T+++G C++ KV
Sbjct: 153 KKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKV 212
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A++LF +MV G P++V+YNTL+ C+ G M E+ LL EM G+ PD F+ +
Sbjct: 213 DTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL 272
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G K G++ AL + + Y LI LC+ R A L E++ ++
Sbjct: 273 MAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC 332
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + + LM+ LCK D + +A + + M DRN P++ TY +LI C G+ +A
Sbjct: 333 EPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQE 392
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ M+ G+ P+ LI+G+CM V+ A L+ + D +YN + +
Sbjct: 393 VFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLC 452
Query: 567 EDG 569
+ G
Sbjct: 453 KTG 455
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 195/402 (48%), Gaps = 5/402 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF ++ + N L LL+ ID+ + + GI PN T+ ++ CK+GD+DK
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY-RRNVLPDLVTYTTLMN 318
LE++ E G PD YN +I + CK A +R M +NV +T+T +++
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNV----ITWTIMID 134
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK ++ EA F +M +G P+ +YN LI +CK K+ + LL EM +G+ P
Sbjct: 135 GLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAP 194
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ G+ ++ ++ +A L ++ G + Y+ L+ LC++ A LL
Sbjct: 195 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 254
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P Y+ LM LCK + AL + ++ + + P + Y LI C
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR EA L ++M E+ PD L++G C + +A+ +L + + +Y
Sbjct: 315 GRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+++ + + G + E+ KR + G PN +T +IH
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A ++L E+V DC V + L+ + KVG + E+ + ++ G QP+
Sbjct: 530 AERLLEEMV--ASDCSPDVYTYTSLVD-------GFCKVGRMVEARRVLKRMAKRGCQPN 580
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V+ L++ + +++ EEM G+ PN T+ L FC GD+++ LE
Sbjct: 581 VVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILE 640
Query: 265 KIE-EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++E +E D+ Y ++ C+ GR++ A L + + P Y L+ GLC+
Sbjct: 641 RLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQG 700
Query: 324 GKVREAHQLFHRM-VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
++ +A ++ M + R P+ +Y +I +EG+ +E+ +L E++GN
Sbjct: 701 KELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 752
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 182/349 (52%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +GF+P +V+ LL+G N I+ +++++ +G PN T+ L H CKN
Sbjct: 142 KMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNR 201
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
++ ++ + G P++VTYN+L+S C+ GR +DA +L R M +R + P+++T+T
Sbjct: 202 HLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFT 261
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ K GK+ EA +L+ M+ + PD+ +Y LI C G++ E++ + Y M N
Sbjct: 262 ALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESN 321
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G YP+ T ++ G+ K R+ + E+ + G+ + Y LI C RP A
Sbjct: 322 GYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVA 381
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ ++G P + YN L++ LC V AL++ M R + ++ TY +I
Sbjct: 382 QEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQG 441
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
C +G+ +A L + GM P+ +I+G+C +++A+AL
Sbjct: 442 MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALF 490
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 204/413 (49%), Gaps = 6/413 (1%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ F + + PSIV LL+ + K+ D ++E+M +GI P +T NI+
Sbjct: 65 EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVM 124
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ C++ + + FL K+ + GF+PDLVT+ +L+ +C R+ DA L+ +
Sbjct: 125 NCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFR 184
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VTYTTL++ LCK + A ++F++M G+ P++V+YN+L+ C+ G+ ++ L
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWL 244
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV-VELQRFGVSISRDIYDY--LIVA 424
L +MM GI P+ T ++ + K G+++ A L V +Q +S+ D++ Y LI
Sbjct: 245 LRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQ---MSVYPDVFTYTALING 301
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC R A + + +GY P+ Y L+ CK V D + EM + + +
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY LI +C +GR A + ++M PD + VL++G C V KA +
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ K+ + +Y + + G + +L G PN +T MI
Sbjct: 422 YMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 208/393 (52%), Gaps = 3/393 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS + ++NG + + ++ +EM G+ PN +T+N + + CK+G VD
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ +G PD V Y TLI +CK G + A+ L+ M ++ ++PD + YT ++ G
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ GK+ EA ++F++M RG+ PD V+Y TLI YCK G+M+++ SL +M+ +G+ P+
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T + G K G++ +A L+ E+ G+ ++ Y+ L+ LC+ A L+E
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P + LM++ CK + A L EM+DR ++P++ T+ L+ FC G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ L+ MLE G++P++ L+ YC+ ++ + + + D+ +YN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ + ++ + L K GF NLT
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGF---NLT 394
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 204/411 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G +++ K ++ G +P++ + N ++ L K +D +V EM GI P
Sbjct: 19 GYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVP 78
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T + L FCK G++ +++E++ PD + Y +I C+ G++ +A ++
Sbjct: 79 DTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVF 138
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R V PD VTYTTL++G CK G++ +A L ++MV GL+P++V+Y L CK
Sbjct: 139 NKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKL 198
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ + LL+EM G G+ + T +V G K G + A+ L+ E++ G+ +
Sbjct: 199 GQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITF 258
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ A C+ A LL + G P++ +N LM C + D L M++
Sbjct: 259 TTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLE 318
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ I P+ +TY +L+ +C + M G++PDS +LI G+C +++ +
Sbjct: 319 KGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKE 378
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L A+K SYN++ F + +S+ EL + R G A +
Sbjct: 379 AWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAAD 429
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 196/396 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + R+ ++ G P V L++G KL I +++++EM + I P+
Sbjct: 57 KSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFI 116
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + C+ G + + + K+ G +PD VTY TLI YCK G + AF L+ M
Sbjct: 117 AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQM 176
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTYT L +GLCK G+V A++L H M +GL +I +YN+L+ CK G +
Sbjct: 177 VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNI 236
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ EM G+YPDT T ++ Y K G ++ A L+ E+ G+ + ++ L
Sbjct: 237 RQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVL 296
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C LL + + G +P+ YN LM+ C +++ + M R +
Sbjct: 297 MNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGV 356
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L EM E G + +I G+ +K +++A
Sbjct: 357 MPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L ++ D E YN ++ +G++ +EL
Sbjct: 417 LFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 19/447 (4%)
Query: 33 LQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA 92
L++IQ+ + K L LY + N I+ L+C S K D+ L + + ++P
Sbjct: 30 LKLIQEMQMKGLKPNLYTY-------NSIILLLCKSGKVDDAERVLREMINQGIVPDTVV 82
Query: 93 HEISRVLLRCQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
+ + + C+ ++ +A F+ ++ I P Y ++ L K A K+ +
Sbjct: 83 Y-TTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVICGLCRCGKMMEADKVFNK 140
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+ + P V + LI Y K G + ++F + + G P++V+ L
Sbjct: 141 MFSRGVE-PDEV-TYTTLID-------GYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+GL KL +D ++ EM G+ N T+N L + CK+G++ + +E++E G
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD +T+ TL+ +YCK G + A L R M R + P ++T+ LMNG C G + + +
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGER 311
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L M+ +G+ P+ +YN+L+ YC M+ + + M G+ PD+ T I+++G+
Sbjct: 312 LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHC 371
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K + A L E+ G +++ Y+ +I + + A L E + ++G E
Sbjct: 372 KARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAE 431
Query: 452 IYNELMESLCKCDSVADALLLKDEMVD 478
IYN ++ ++ AL L DE ++
Sbjct: 432 IYNLFVDISYGEGNMETALELCDEAIE 458
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 145/292 (49%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R PD+V+Y+T++NG C G++++ +L M +GL P++ +YN++I CK GK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ +++ +L EM+ GI PDT ++ G+ K G + +A L E+++ + Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC+ + A + ++ G P Y L++ CK + A L ++MV
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P++ TY AL C +G+ A L+ EM G+ + L+NG C ++ +A
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L+ DT ++ + + + + G++ K EL + L G P +T
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G + ++ + R+ LD G QP++++ N L+NG ++ ++ M GI P
Sbjct: 264 AYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMP 323
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N L +C ++ + + G PD TYN LI +CK + +A++L+
Sbjct: 324 NTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLH 383
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + +Y +++ G K+ K+ EA +LF M G++ D YN + E
Sbjct: 384 KEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGE 443
Query: 359 GKMQESKSLLYEMMGN 374
G M+ + L E + N
Sbjct: 444 GNMETALELCDEAIEN 459
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 240/541 (44%), Gaps = 71/541 (13%)
Query: 83 LKPLLPHLGAHEISRVLLR---CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWN 139
LK +LP L +S+++ C S S L+FFN + + + T +YC ++H L +
Sbjct: 74 LKRILPSLTPRHVSKLITLNPLCLPPS-SLLSFFNHLASRPPFRHTLHSYCTMLHFLCLH 132
Query: 140 NKFSFAMKMLCELVE-------------LVKDCPHSVD-------VFQDLISCTEDCNWA 179
A ++ LV +++ P VF LIS A
Sbjct: 133 RMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLVFDALIS-------A 185
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC--IDQCWQVYEEMGRIGIC 237
YV G ++ + FR F I C LL +++L I++ W +Y E+ G
Sbjct: 186 YVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLEVLDSGYP 245
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P + FN+L H FCK GDV ++I + G P +V++NTLIS CK G + + F L
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305
Query: 298 YRIMYRRNVLPDL-----------------------------------VTYTTLMNGLCK 322
+M V PD+ VT+TTL++G CK
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GKV A + F M+ +G+ PD+V+YN LI CK G ++E++ L+ EM +G+ PD T
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K+G + SAL + + G+ + + LI LC++ R A +L +
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G+ P Y +++ CK V L EM P + TY AL+ C G+
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A L+D ML G+ P+ +L++G+ + F ++K + D SY A+
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVDVDI---FNSEKGLVTDYASYTALV 602
Query: 563 N 563
N
Sbjct: 603 N 603
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 24/312 (7%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
L +Y T+++ LC + +AH L +V R G + +++++ + S L+
Sbjct: 119 LHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRTMPRHHHHHHSVGLV 178
Query: 369 YEMM-----GNGIYPDTFTC-------QIIVQGYGKEGRLLSALNL-VVELQRF------ 409
++ + +G PD C + V G E L + L VE++R
Sbjct: 179 FDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLE 238
Query: 410 ----GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
G ++ L+ C+ A + + I + G P++ +N L+ CK
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGD 298
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V + LK M + P + T+ ALI C GR E L DEM G++P+
Sbjct: 299 VEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT 358
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI+G C V+ A + D +YNA+ N + GDL + L G
Sbjct: 359 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASG 418
Query: 586 FAPNNLTCKYMI 597
P+ +T +I
Sbjct: 419 LKPDKITFTTLI 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%)
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
E++D P + + L+ FC G G A + DE+ + G+ P LI+G C
Sbjct: 238 EVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
DV + L G + D +++A+ N ++G L + L G PN +T
Sbjct: 298 DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFT 357
Query: 595 YMIHSLWKG 603
+I KG
Sbjct: 358 TLIDGQCKG 366
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 12/426 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ LL+GL + + + + +M PN TF L +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G + + L+++ E+G P +TY T++ CKKG A L R M +++
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++ LCK+G+ +A LF M +G+ PD+ +YN++I +C G+ +++ L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ G+ + Y +I C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + + G P+L +N L++ C + D + L EM + + +T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI F +G A+ L+ EM+ SG+ PD C L++G C + A +
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 548 KKFQIYDT-----------ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K + D ++YN + + +G + EL + G P+ +T M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 597 IHSLWK 602
I L K
Sbjct: 553 IDGLCK 558
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 198/399 (49%), Gaps = 1/399 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V L+ ++++ D +Y++M R I + ++FNIL FC +
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD+VT+ TL+ C + R+++A + M+ P++VT+TTLMNGLC+
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG++ EA L RM+ GL P ++Y T++ CK+G + +LL +M + I P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ K+GR A NL E+Q G+ Y+ +IV C R A LL+ +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G P+ LI+GYC K ++ LL + + DT +YN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L + + G P+ +TC ++ L
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 210/452 (46%), Gaps = 20/452 (4%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-------- 283
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F DL + + G ++ + ++ L+ P +V+ N L+N +K
Sbjct: 284 KGIFPDLFT-YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T++ + FCK +D + +G P+L+T+NTLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M ++ D TY TL++G G + A L M+ GL
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ +TL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + + +G + P++
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L+ CK V D L L EM R I + TY LIC F +G A+ + EM
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 247/546 (45%), Gaps = 57/546 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L ++ S A+ ++ E C +V F
Sbjct: 133 ALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT--CRPNVVTFTT 189
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-------LNCI 221
L++ + G I E+ + ++ G QP+ ++ +++G+ K LN +
Sbjct: 190 LMN-------GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 222 DQCWQV-----------------------------YEEMGRIGICPNTHTFNILTHVFCK 252
+ +V + EM GI P+ T+N + FC
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G L+++ E PD+VTYN LI+++ K+G+ +A LY M R ++P+ +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+++++G CK+ ++ A +F+ M +G SP+++++NTLI YC ++ + LL+EM
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ DT T ++ G+ G L +AL+L+ E+ G+ D L+ LC + +
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 433 AATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A + + + + +G P ++ YN L+ L +A L +EM R I
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY ++I C R EA + D M P+ LINGYC V+
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L ++ + + +Y + F + G+++ +++ + + G P+ +T + M+ LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Query: 602 KGMERK 607
E K
Sbjct: 663 SKEELK 668
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 183/419 (43%), Gaps = 22/419 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+ +P + I+D +C + D+ + K + P L + S ++ C S S
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN-SMIVGFCSSGRWSD 308
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
+ +I P Y +++ KF A ++ E+ L + + + +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYSSM 366
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I + K + + F G P++++ N L++G ID ++
Sbjct: 367 ID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM G+ +T T+N L H F GD++ L+++ G PD+VT +TL+ C G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 290 RLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+L DA ++++M + V PD+ TY L++GL EGK EA +L+ M H
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD ++Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
L L E+ R G+ + Y LI + A + + + G P ++ I N L
Sbjct: 600 GLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 20/331 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ N+ A M + K C ++ F LI Y
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA--TKGCSPNLITFNTLID-------GYC 406
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
I + + + + G + N L++G + ++ + +EM G+CP+
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 242 TFNILTHVFCKNGDV-DKVNGF--LEKIEEE--------GFDPDLVTYNTLISSYCKKGR 290
T + L C NG + D + F ++K +++ G +PD+ TYN LIS +G+
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A LY M R ++PD +TY+++++GLCK+ ++ EA Q+F M + SP++V++ T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YCK G++ + L EM GI + T ++ G+ K G + AL++ E+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERI 441
V ++ L A ++LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+C+ LL+GL + ++++ M +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+TTL+NG CK G+V + +LF M RG+ + ++Y TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I + K G + + + EM+ +G+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/423 (29%), Positives = 209/423 (49%), Gaps = 1/423 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + G++ E+ + G P+ + N L++ +L I Q V E M G P
Sbjct: 254 AHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEP 313
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF-DPDLVTYNTLISSYCKKGRLNDAFYL 297
+ T+N+L C+ G VD+ +++E PD+VTYNTL+ + K R +DA L
Sbjct: 314 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + V LVT+ ++ GLC+EG++ EA M GL+PD+++YNTLI AYCK
Sbjct: 374 LEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCK 433
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ ++ L+ EM+ +G+ DTFT ++ KE R A L+ + G
Sbjct: 434 ARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVS 493
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y ++ A ++N+P A L + + + PS+ YN L++ LC + +A+ +E++
Sbjct: 494 YGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM 553
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + P +TY +I +C G +A ++MLE+ PD C L+NG C+ +
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLE 613
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L +A+K + D +YN + +DGD+ + G P+ T ++
Sbjct: 614 KAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVL 673
Query: 598 HSL 600
+L
Sbjct: 674 SAL 676
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 218/453 (48%), Gaps = 15/453 (3%)
Query: 162 SVDVFQDLISCTEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
S+DVF+ LI+ N + G + ++ T G P +V+ N LL
Sbjct: 194 SLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLK 253
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
+ + + + M + GI P T+N L + + G + + +E + GF+P
Sbjct: 254 AHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEP 313
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVREAHQL 332
DL TYN L + C+ G++++AF L M +++ PD+VTY TL++ K + +A L
Sbjct: 314 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNL 373
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G+ +V++N ++ C+EG+++E+ L M G+ PD T ++ Y K
Sbjct: 374 LEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCK 433
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ A L+ E+ R G+ + + L+ LC++ R A LL Q G+VP
Sbjct: 434 ARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVS 493
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y +M + K + AL L DEM R + PS+ TY LI C IG+ EA+ ++E++
Sbjct: 494 YGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM 553
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVFNMFAEDG 569
+ G++PD ++I+ YC E D+ KA F K + Y D + N + N G
Sbjct: 554 KKGLVPDDTTYNIIIHAYCKEGDLEKA---FQFHNKMLENYFKPDVVTCNTLMNGLCLHG 610
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L K ++L + + G + +T +I +L K
Sbjct: 611 KLEKAIKLFESWAEKGKKVDVITYNTLIQALCK 643
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 215/505 (42%), Gaps = 80/505 (15%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC- 237
AY ++G I+++ GF+P + + N L GL + +D+ +++ +EM + I
Sbjct: 289 AYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVS 348
Query: 238 PNTHTFNIL------------------------------TH-----VFCKNGDVDKVNGF 262
P+ T+N L TH C+ G +++ G
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + EEG PD++TYNTLI +YCK + AF L M R + D T TL+ LCK
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E + EA +L RG PD VSY T++ AY KE K + + L EM + P +T
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN------------- 429
+++G G+L A++ + EL + G+ Y+ +I A C++
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588
Query: 430 ----RPFAAT------------------SLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+P T L E + G + YN L+++LCK V
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
AL +M R ++P TY ++ GRS EA +++ ++ ESG L + + LI
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSE-RFSYPLI 707
Query: 528 NGYCME----KDVN-KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
E KD K++ G AK D ESYN G L + + +
Sbjct: 708 KSSAEEVKTGKDPEVKSDCESGGNAKGG---DQESYNKSVKELCVGGQLKEAKAVLDEMM 764
Query: 583 RLGFAPNNLTCKYMIHSLWKGMERK 607
+ G + ++ T ++ L K +R+
Sbjct: 765 QKGMSVDSSTYITLMEGLIKRQKRQ 789
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/526 (27%), Positives = 253/526 (48%), Gaps = 22/526 (4%)
Query: 86 LLP-HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
LLP H+ A +L+ Q D + AL+ FN VK + K T Y ++ L ++ +F
Sbjct: 5 LLPKHVAA------VLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDA 58
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
++L E+ L D V+ +S + Y + G ++E+ F + +PS
Sbjct: 59 MERVLMEM-RLNVDNSLLEGVY---VSAMRN----YGRKGKVQEAVDVFERMDFYNCEPS 110
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
I S N ++N L++ +Q +VY M GI P+ TF I FC+ L
Sbjct: 111 IFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLN 170
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+ +G + + V Y T+IS + ++ +A+ L+ M R + P + T+ LM+ LCK+G
Sbjct: 171 NMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKG 230
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG-------KMQESKSLLYEMMGNGIY 377
++E +L ++++ G+ P++ ++N I C++G K+ E+++ L++M+ G+
Sbjct: 231 HLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLE 290
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD FT I+ GY K G++ A ++ + + G Y LI+ +CQD A +L
Sbjct: 291 PDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALAL 350
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
E G PS+ +YN L++ L + V AL L ++M + P + TY +I C
Sbjct: 351 FEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCK 410
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+G +A +L++ + G LPD LI+GYC ++ A +L D +
Sbjct: 411 MGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVIT 470
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
YN++ N + +ME K + G PN +T +I SL K
Sbjct: 471 YNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKA 516
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 212/423 (50%), Gaps = 8/423 (1%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+++ F K L +G P I + N L++ L K + + ++ ++ + G+CPN TFNI
Sbjct: 199 EAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFI 258
Query: 248 HVFCKNGDVDKVNG-------FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
C+ G ++ N +L K+ +G +PD TYNT+I Y K G++ DA + +
Sbjct: 259 QGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD 318
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ +PD TY +L+ G+C++G + A LF + +GL P IV YNTLI ++G
Sbjct: 319 AKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGL 378
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L+ +M G+ PD +T +++ G K G + A NL+ G ++
Sbjct: 379 VLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNT 438
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ + A +L+ + G P + YN ++ LCK D + ++++
Sbjct: 439 LIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG 498
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P++ TY LI C + EA+ L++E+ G++PD +I+G+C D+++A
Sbjct: 499 CLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAY 558
Query: 541 ALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L ++++I + +YN + N F+E D+ +L G P++ T + MI
Sbjct: 559 QLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDG 618
Query: 600 LWK 602
K
Sbjct: 619 FCK 621
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 179/342 (52%), Gaps = 5/342 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I + F + L G +PSIV N L+ GL + + + Q+ +M + G+ P+ T+
Sbjct: 342 GDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTY 401
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ + CK G V N L +G+ PD+ T+NTLI YCK+ ++++A + M+
Sbjct: 402 NLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWS 461
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V PD++TY +++NGLCK K + + F ++ +G P+I++YN LI + CK K+ E
Sbjct: 462 HGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTE 521
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDYLI 422
+ LL E+ G+ PD + ++ G+ G L A L + Q++ + + Y+ +I
Sbjct: 522 ALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMI 581
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA--LLLKDEMVDRN 480
A + A L +G G P Y +++ CK +V LLK+ ++
Sbjct: 582 NAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKE--IEIG 639
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
PSL+T+ +I C C R EAV ++ M+ +G++P++ +
Sbjct: 640 FVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 175/372 (47%), Gaps = 1/372 (0%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y KVG I+++ + + GF P + L+ G+ + ID ++EE G+
Sbjct: 301 YGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLK 360
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ +N L + G V K + + +EG PD+ TYN +I+ CK G ++DA L
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ LPD+ T+ TL++G CK K+ A + M G++PD+++YN+++ CK
Sbjct: 421 LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
K ++ +M G P+ T I+++ K ++ AL+L+ E++ G+
Sbjct: 481 AAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVS 540
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEM 476
+ +I C + A L R+ Q + ++ YN ++ + + + A L EM
Sbjct: 541 FGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEM 600
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
D+ P TYR +I FC +G + + +E G +P +IN C++ V
Sbjct: 601 GDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRV 660
Query: 537 NKAEALLGFFAK 548
++A ++ +
Sbjct: 661 HEAVGIVHLMVR 672
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 45/361 (12%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P YC ++ + + A+ + E L K S+ ++ LI +
Sbjct: 326 PDEFTYCSLIIGVCQDGDIDHALALFEE--ALGKGLKPSIVLYNTLIK-------GLSQQ 376
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ ++ + G P I + N ++NGL K+ C+ + G P+ TF
Sbjct: 377 GLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTF 436
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +CK +D G L+ + G PD++TYN++++ CK + D ++++
Sbjct: 437 NTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ LP+++TY L+ LCK KV EA L + +RGL PD VS+ T+I +C G + E
Sbjct: 497 KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDE 556
Query: 364 S------------------------------------KSLLYEMMGNGIYPDTFTCQIIV 387
+ + L +EM G PD++T ++++
Sbjct: 557 AYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMI 616
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ K G + S + +++ G S + +I LC +R A ++ + + G V
Sbjct: 617 DGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVV 676
Query: 448 P 448
P
Sbjct: 677 P 677
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +++ N +LNGL K + + ++ + G PN T+NIL CK V +
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEA 522
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR----------NVL-- 307
LE+I G PD V++ T+IS +C G L++A+ L+R M ++ N++
Sbjct: 523 LDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMIN 582
Query: 308 ------------------------PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
PD TY +++G CK G V + + + G P
Sbjct: 583 AFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVP 642
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+ ++ +I C + ++ E+ +++ M+ G+ P+ +V + + + ++A ++
Sbjct: 643 SLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEA-----VVTIFDADKKAVAAPKII 697
Query: 404 VE 405
VE
Sbjct: 698 VE 699
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 207/427 (48%), Gaps = 2/427 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + + + +D G +P +V+ N +++GL K +D+ V + M G+ P+
Sbjct: 246 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 305
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + CK VD+ +G L+ + ++ PD+ TYN LI Y G + M
Sbjct: 306 TYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM 365
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
Y R + PD+VTY+ L++ LCK GK EA ++F+ M+ +G+ P++ Y L+ Y G +
Sbjct: 366 YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL M+ NGI P+ + I++ Y K+ + A+++ + + G+S Y L
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGIL 485
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+ R A ++ DG P+ ++N L+ LC D A L EM D+ +
Sbjct: 486 IDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV 545
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ + ++C C G+ A L+D M G+ P+ LI G+C+ ++A
Sbjct: 546 RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ 605
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL D SY+ + + + G + L + LR G P +T ++ L+
Sbjct: 606 LLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665
Query: 602 KGMERKF 608
R+F
Sbjct: 666 H--TRRF 670
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/461 (25%), Positives = 209/461 (45%), Gaps = 35/461 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + + + +D G +P +V+ N +++GL K +D+ V + M + P+
Sbjct: 281 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQ 340
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L H + G+ +V LE++ G DPD+VTY+ L+ CK G+ +A ++ M
Sbjct: 341 TYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCM 400
Query: 302 YRRNVLPDLVTYTTLMNG--------------------------------LC---KEGKV 326
R+ + P++ Y L++G LC K+ +
Sbjct: 401 IRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMI 460
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA +F RM GLSPD+V+Y LI A CK G++ ++ +M+ +G+ P++ +
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V G R A L E+ GV + ++ ++ LC + + A L++ + + G
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN L+ C +A L D MV +KP L +Y L+ +C GR A
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L EML G+ P + ++ G + ++A+ L K Q +D +YN + N
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + + ++ + PN +T MI L+KG +K
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKK 741
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 226/491 (46%), Gaps = 10/491 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D +KP Y I+ L A +L +++ KD + + LI
Sbjct: 297 DKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMID--KDVKPDIQTYNCLIH------- 347
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+ G +E + + G P +V+ + LL+ L K + +++ M R GI P
Sbjct: 348 GYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKP 407
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + IL H + G + + L+ + G P+ +N ++ +Y KK +++A +++
Sbjct: 408 NVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIF 467
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+VTY L++ LCK G+V +A F++M++ G++P+ V +N+L++ C
Sbjct: 468 SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTV 527
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ ++++ L +EM G+ P+ I+ EG+++ A L+ ++R GV + Y
Sbjct: 528 DRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISY 587
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C R A LL+ + G P L Y+ L+ CK + +A L EM+
Sbjct: 588 NTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLR 647
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P TY ++ R EA L M++SG D +++NG C V++
Sbjct: 648 KGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDE 707
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT-CKYMI 597
A + K + ++ + ++ + G M+L G PN +T C M
Sbjct: 708 AFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMK 767
Query: 598 HSLWKGMERKF 608
+ + +G+ +F
Sbjct: 768 NIIQEGLLDEF 778
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 196/449 (43%), Gaps = 50/449 (11%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG---ICPNTHTFNILTHV 249
R+ + G P++VSCN LL GL +++ ++ M G PN T+N +
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
CK VD+ G L+ + ++G D+VTY+T+I CK ++ A + + M + V PD
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+VTY T+++GLCK V A + M+ +G+ PD+V+YNT+I CK + + +L
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
M+ + PD T ++ GY G + + E+ G+ Y L+ LC++
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNG 388
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS----- 484
+ A + + + G P++ IY L+ ++AD L D MV I P+
Sbjct: 389 KCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFN 448
Query: 485 ------------------------------LSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ TY LI C +GR +AV ++M+
Sbjct: 449 IVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND 508
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES------YNAVFNMFAED 568
G+ P+S + L+ G C KAE L F+++D +N + +
Sbjct: 509 GVTPNSVVFNSLVYGLCTVDRWEKAEELF------FEMWDQGVRPNVVFFNTIMCNLCNE 562
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
G + L R+G PN ++ +I
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNVISYNTLI 591
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 243/566 (42%), Gaps = 33/566 (5%)
Query: 53 PETQNPNKIVDLIC--SSLKKGDSHLT-LLQNDLKP--------LLPHLGAHEISRVLLR 101
P+ N I+D +C ++ + D L ++ D+KP + +L E V+ R
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRR 361
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
+ L P Y L++ L N K + A K+ ++ K
Sbjct: 362 LEEMYARGL------------DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIR--KGIKP 407
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V ++ L+ Y G I + + G P+ N +L K I
Sbjct: 408 NVTIYGILLH-------GYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMI 460
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D+ ++ M + G+ P+ T+ IL CK G VD ++ +G P+ V +N+L
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ C R A L+ M+ + V P++V + T+M LC EG+V A +L M G+
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P+++SYNTLI +C G+ E+ LL M+ G+ PD + +++GY K GR+ +A
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E+ R GV+ Y ++ L R A L + + G + YN ++ LC
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + V +A + + ++++P++ T+ +I GR +A+ L + G++P+
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+++ E +++ + L K D+ NA+ G++ + +
Sbjct: 761 TYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820
Query: 582 LRLGFAPNNLTCKYMIHSLWKGMERK 607
+ F+ T +I SL+ E K
Sbjct: 821 DEMNFSLEASTTSLLI-SLFSREEYK 845
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 199/438 (45%), Gaps = 9/438 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV-YEEMGRIGICP 238
+ ++G I F F L G++ + V N LLNGL +D+ + M G P
Sbjct: 100 FCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMP 159
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD---PDLVTYNTLISSYCKKGRLNDAF 295
N + N L C V++ L + E+G P++VTYNT+I CK ++ A
Sbjct: 160 NVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAE 219
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ + M + V D+VTY+T+++GLCK V A + M+ +G+ PD+V+YNT+I
Sbjct: 220 GVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGL 279
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK + ++ +L M+ G+ PD T I+ G K + A ++ + V
Sbjct: 280 CKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDI 339
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI LE + G P + Y+ L++ LCK +A +
Sbjct: 340 QTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYC 399
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ + IKP+++ Y L+ + G + L+D M+ +G+ P++ I +++ Y +
Sbjct: 400 MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM 459
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+++A + ++ D +Y + + + G + + + + G PN++
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519
Query: 596 MIHSL-----WKGMERKF 608
+++ L W+ E F
Sbjct: 520 LVYGLCTVDRWEKAEELF 537
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 10/415 (2%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI---DQCWQVYEEMGRI---GICPN 239
I ++ K F + L S+ + N LLN + + C + ++ M R + P+
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLY 298
T++ILT FC+ G ++ I + G+ + V N L++ C R+++A L
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG---LSPDIVSYNTLIFAY 355
R M +P++V+ TL+ GLC E +V EA +L H M G +P++V+YNT+I
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK + ++ +L M+ G+ D T I+ G K + A ++ + GV
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ +I LC+ A +L+ + G P + YN +++ LCK +V A +
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+D+++KP + TY LI + G E V ++EM G+ PD +L++ C
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+A + +K + Y + + +A G ++ L +L + G +PNN
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 141/316 (44%), Gaps = 7/316 (2%)
Query: 294 AFYLYRIMYR---RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
A L+ M R V PDL TY+ L C+ G++ F ++ G + V N
Sbjct: 71 AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQ 130
Query: 351 LIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
L+ C ++ E+ +L M G P+ +C +++G E R+ AL L+ +
Sbjct: 131 LLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAED 190
Query: 410 G---VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G + + Y+ +I LC+ A +L+ + G + Y+ +++ LCK +V
Sbjct: 191 GGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAV 250
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
A + M+D+ +KP + TY +I C A ++ M++ G+ PD +
Sbjct: 251 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI 310
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I+G C + V++A+ +L K D ++YN + + + G+ +++ + G
Sbjct: 311 IDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370
Query: 587 APNNLTCKYMIHSLWK 602
P+ +T ++ L K
Sbjct: 371 DPDVVTYSLLLDYLCK 386
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/521 (27%), Positives = 236/521 (45%), Gaps = 34/521 (6%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F ++ D +KP + Y + + +L NK + ++V P V F LI
Sbjct: 150 LFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMV--ADAVPPDVSTFNILIR 207
Query: 172 C-----------------------TEDCNWAYVKVGLIRES-----FKTFRKTLDVGFQP 203
++ + + G I E+ + ++ G +
Sbjct: 208 ALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCEL 267
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQ-VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
+ VS N L+NGL K I++ + +YEE G CP+ TFN L + C+ G + +
Sbjct: 268 TSVSVNVLVNGLCKEGRIEEALRFIYEEEG---FCPDQVTFNALVNGLCRTGHIKQGLEM 324
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ + E+GF+ D+ TYN+LIS CK G +++A + M R+ P+ VTY TL+ LCK
Sbjct: 325 MDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCK 384
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E V A +L + +G+ PD+ ++N+LI C + + L EM G PD FT
Sbjct: 385 ENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFT 444
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+++ E RL AL L+ E++ G + + +Y+ LI LC++NR A + +++
Sbjct: 445 YSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQME 504
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G S YN L+ LCK V +A L D+M+ +KP TY ++ FC G
Sbjct: 505 MLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIK 564
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A ++ M +G PD LI G C V+ A LL K + ++YN V
Sbjct: 565 RAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVI 624
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + M L + + G P+ +T K + L G
Sbjct: 625 QALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNG 665
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 180/351 (51%), Gaps = 1/351 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G I E+ + + +P+ V+ N L+ L K N ++ ++ + G+ P+
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + + E+++E+G DPD TY+ LI S C + RL +A L + M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++V Y TL++GLCK +V +A +F +M G+S V+YNTLI CK ++
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ L+ +M+ G+ PD FT +++ + ++G + A ++V + G Y L
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A+ LL + G V + + YN ++++LCK +A+ L EM+++
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGD 648
Query: 482 KPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P + TY+ + C G G EAV EMLE G+LP+ L G C
Sbjct: 649 PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 188/408 (46%), Gaps = 3/408 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I E+ + + + GF P V+ N L+NGL + I Q ++ + M G + +
Sbjct: 281 KEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L CK G++D+ L + +P+ VTYNTLI + CK+ + A L R++
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ VLPD+ T+ +L+ GLC A +LF M +G PD +Y+ LI + C E ++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ LL EM +G + ++ G K R+ A ++ +++ GVS S Y+ L
Sbjct: 459 KEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTL 518
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A L++++ +G P Y +++ C+ + A + M
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGC 578
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + TY LI C GR A L+ + GM+ Q +I C K +A
Sbjct: 579 EPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMR 638
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAP 588
L +K D +Y VF G + + ++ L G P
Sbjct: 639 LFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILP 686
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 191/403 (47%), Gaps = 16/403 (3%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+++L +V +DC + + LI C E+ A ++ + S G
Sbjct: 356 AVEILHHMVS--RDCEPNTVTYNTLIGTLCKENHVEAATELARVLTS---------KGVL 404
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + N L+ GL + + +++EEM G P+ T++IL C + +
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALML 464
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+++E G ++V YNTLI CK R+ DA ++ M V VTY TL+NGLCK
Sbjct: 465 LKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCK 524
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V EA QL +M+ GL PD +Y T++ +C++G ++ + ++ M NG PD T
Sbjct: 525 SKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVT 584
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K GR+ A L+ +Q G+ ++ Y+ +I ALC+ R A L +
Sbjct: 585 YGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMM 644
Query: 443 QDGYVPSLEIYNELMESLCKCDS-VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G P + Y + LC + +A+ EM+++ I P ++ L C +
Sbjct: 645 EKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSME 704
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ L++ ++E G S+ +I G+ + N A A LG
Sbjct: 705 DTLIQLINMVMEKGRFSQSETS--IIRGFLKIQKFNDALANLG 745
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 222/524 (42%), Gaps = 32/524 (6%)
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
PL P ++ LLR Q DS SAL+ F W +P S + + H L +
Sbjct: 52 PLPPDFSPSQLLD-LLRRQPDSSSALSLFQWAS----AQPNYSAHPSVFHELLRQLARAG 106
Query: 145 AMKMLCELVELVKDCPHSVD-----VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
+ + L+ + VD +F + + + + + L+ E D
Sbjct: 107 SFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMER--------DF 158
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
+P N L+ L+K N + ++ +M + P+ TFNIL CK +
Sbjct: 159 AVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPA 218
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE + G PD T+ TL+ + ++ + A + +M V+ L+NG
Sbjct: 219 ILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNG 278
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCKEG++ EA + + G PD V++N L+ C+ G +++ ++ M+ G D
Sbjct: 279 LCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD------IYDYLIVALCQDNRPFA 433
+T ++ G K G + A+ ++ + +SRD Y+ LI LC++N A
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHM------VSRDCEPNTVTYNTLIGTLCKENHVEA 390
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
AT L + G +P + +N L++ LC + A+ L +EM ++ P TY LI
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIE 450
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C R EA+ L+ EM SG + + LI+G C V AE +
Sbjct: 451 SLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSR 510
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +YN + N + + + +L + + G P+ T M+
Sbjct: 511 SSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTML 554
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 202/442 (45%), Gaps = 35/442 (7%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F F K + +G QP V+ N L+NGL K+ Q + +++ G P +T+ + +
Sbjct: 149 AFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G+ G +K+EE G P++VTYN LI S CK +N+A ++ M + + P
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 309 DLVTYTTLMNGLC-----------------------------------KEGKVREAHQLF 333
D+ TY +L+ GLC KEGKV EA +F
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M G+ PD+V+Y++L++ Y ++ E++ L M+ G PD F+ I+++GY K
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
R+ A L E+ G++ Y+ LI LCQ R A L + + +G +P L Y
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L++ CK + A L M +KP ++ Y LI C G +A L E+
Sbjct: 449 SMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFV 508
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+LP+ QI +IN C E +++A D SYN + F + D S+
Sbjct: 509 QGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESR 568
Query: 574 LMELQKRFLRLGFAPNNLTCKY 595
+L GF T +
Sbjct: 569 AAQLIGEMRDRGFVAEAGTTTW 590
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 197/425 (46%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A VK+G + + K +++ G P I + + L++ L +D + V+ +M ++G+
Sbjct: 103 AIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQ 162
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ TFN L + CK G + F + E G P + TY T+I+ CK G A L
Sbjct: 163 PDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGL 222
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ M P++VTY L++ LCK+ V EA +F M + +SPDI +YN+LI C
Sbjct: 223 FKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCN 282
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ +E+ +LL EM I P+ FT ++V KEG++ A + + GV
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT 342
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ A L + + G P YN L++ CK + +A L +EM+
Sbjct: 343 YSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + P Y LI C +GR EA L M +G LPD +L++G+C E +
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L + D YN + + + G+L +L G PN +I
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522
Query: 598 HSLWK 602
++L K
Sbjct: 523 NNLCK 527
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 190/398 (47%), Gaps = 9/398 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+PT Y I++ L + + A + ++ E C +V + LI + K
Sbjct: 197 QPTVYTYTTIINGLCKIGETTAAAGLFKKMEE--AGCQPNVVTYNILID-------SLCK 247
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
L+ E+ F P I + N L+ GL + + EM + I PN T
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN+L CK G V + G + + E G +PD+VTY++L+ Y + + +A L+ M
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD +Y L+ G CK ++ EA QLF+ M+H+GL+PD V+YNTLI C+ G+++
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ L M NG PD FT +++ G+ KEG L A L +Q + +Y+ LI
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A+C+ A L + G +P+++IY ++ +LCK + +AL M
Sbjct: 488 DAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCP 547
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
P +Y +I F A L+ EM + G + ++
Sbjct: 548 PDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEA 585
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K I E+ + F + + G P V+ N L++GL +L + + +++ M G P
Sbjct: 384 GYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+++L FCK G + K ++ PD+ YN LI + CK G L DA L+
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++ + +LP++ YTT++N LCKEG + EA + F M G PD SYN +I + +
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563
Query: 359 GKMQESKSLLYEMMGNGIYPDTFT 382
+ L+ EM G + T
Sbjct: 564 KDESRAAQLIGEMRDRGFVAEAGT 587
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 206/425 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+++ G I + + K ++ G P+ V+ N L+NG K+ ++ ++ G P
Sbjct: 239 GFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEP 298
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N H C+NG V ++ + +EG DPD+ TYNT+I+ K G L++A +
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 358
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R LPD T+ TL+ LC + ++ EA L + +GLSPD+ ++N LI A CK
Sbjct: 359 NQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 418
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G L EM +G PD T I++ G+L++AL+L+ E++ G S Y
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTY 478
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I ALC+ R A + +++ G S +N L++ LCK + DA L ++MV
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 538
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++PS TY +++ +C G +A +++ M +G D LING C
Sbjct: 539 EGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 598
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A LL K ++YN V +L + L + +G P+ LT K +
Sbjct: 599 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFR 658
Query: 599 SLWKG 603
L +G
Sbjct: 659 GLCRG 663
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 197/410 (48%), Gaps = 14/410 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF--QDLISCTEDCNWAY 180
+P Y VH L N S A+K++ +L+ H DVF +I+C
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVM----DLMLQEGHDPDVFTYNTVINCLS------ 346
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + E+ + +D G P + N L+ L N +++ + E+ G+ P+
Sbjct: 347 -KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDV 405
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+TFNIL + CK GD E+++ G PD VTYN LI C G+L +A L +
Sbjct: 406 YTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M VTY T+++ LCK+ ++ EA ++F +M G+S V++NTLI CK +
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L+ +M+ G+ P T I+ Y K+G L A +++ + G I Y
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ R A LL + G P+ + YN +++SL + +++ DAL L EM +
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645
Query: 481 IKPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P TY+ + C G G EA + EM+ G +P+ R+L G
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 695
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 193/411 (46%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+G + ++ +K + GF+P V+ N ++ L + + +V + M + G P
Sbjct: 274 GYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDP 333
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + + KNG++D+ G + ++ + G PD T+NTLI + C + RL +A L
Sbjct: 334 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLA 393
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + + + PD+ T+ L+N LCK G +LF M G +PD V+YN LI C
Sbjct: 394 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSM 453
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ + LL EM NG T T I+ K+ R+ A + ++ G+S S +
Sbjct: 454 GKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTF 513
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC+ R AT L+E++ ++G PS YN ++ CK + A + + M
Sbjct: 514 NTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTA 573
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + TY LI C GR+ A+ L+ M G+ P + +I ++
Sbjct: 574 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 633
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAP 588
A +L + + D +Y VF G + + + + GF P
Sbjct: 634 ALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP 684
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 213/539 (39%), Gaps = 43/539 (7%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR Q+D +AL N + P+ + Y I+ L F ++ E+ +
Sbjct: 63 LREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEA 122
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
V + + V L+R TF G Q N LLN L + +
Sbjct: 123 --GAGVVRSFVESYARLRRFDDAVDLVRNQLNTF------GVQADTAVYNHLLNVLAEGS 174
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ VY EM GI P+ T N L C+ V LE++ PD T+
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TL+ + ++G + A + M P VT L+NG CK G+V +A + +
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD 294
Query: 340 GLSPDIVSYNTLIFAYC-----------------------------------KEGKMQES 364
G PD V+YNT + C K G++ E+
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
K ++ +M+ G PDT T ++ + RL AL+L EL G+S ++ LI A
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINA 414
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC+ P L E + G P YN L++ LC + +AL L EM S
Sbjct: 415 LCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRS 474
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY +I C R EA + D+M G+ + LI+G C K ++ A L+
Sbjct: 475 TVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIE 534
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K+ +YN++ + + GDL K ++ + GF + +T +I+ L K
Sbjct: 535 QMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKA 593
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 10/338 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P ++ + ++ L N+ A+ + EL VK V F LI+ A KV
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELT--VKGLSPDVYTFNILIN-------ALCKV 418
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F + G P V+ N L++ L + + + +EM G +T T+
Sbjct: 419 GDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTY 478
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK +++ ++++ G VT+NTLI CK R++DA L M +
Sbjct: 479 NTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 538
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P +TY +++ CK+G +++A + M G D+V+Y TLI CK G+ Q
Sbjct: 539 EGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 598
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M GI P ++Q + L AL+L E+ G Y +
Sbjct: 599 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFR 658
Query: 424 ALCQDNRPFA-ATSLLERIGQDGYVPSLEIYNELMESL 460
LC+ P A L + G++P + L E L
Sbjct: 659 GLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 696
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 215/458 (46%), Gaps = 23/458 (5%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K P V F LI C C+ + + TF K +GFQP +V+ + LL+GL
Sbjct: 106 KQIPCDVYSFNILIKCFCSCSK-------LPFALSTFGKITKLGFQPDVVTFSTLLHGLC 158
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ + + ++ +M R PN TF L + C+ G V + L+++ E+G P+ +
Sbjct: 159 VEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 214
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
TY T++ CK G A L R M ++ P++V Y+ +++GL K+G+ +AH L+
Sbjct: 215 TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTE 274
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M +G+ PD+ +YN +I +C G+ E++ LL EM+ I P+ T ++ Y KE +
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
A L E+ G+ + Y+ +I C+ NR AA + + G P + +N
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L++ C + D L EM + + +TY LI FC +G A+ L +M+ SG
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAK-KFQI----------YDTESYNAVFNM 564
+ PD C L++G C + A + K K + D ++YN + +
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+G + EL K G PN +T MI+ L K
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCK 552
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 204/399 (51%), Gaps = 5/399 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS++ N L+ ++++ D +Y++M R I + ++FNIL FC +
Sbjct: 75 PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALST 134
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + GF PD+VT++TL+ C + R+++A L+ M R P++VT+TTLMNGLC+
Sbjct: 135 FGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCR 190
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG+V EA L RMV GL P+ ++Y T++ CK G + +LL +M + I P+
Sbjct: 191 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVV 250
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ G K+GR A NL E+Q G+ Y+ +I C R A LL+ +
Sbjct: 251 IYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P++ Y+ L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G PD LI+GYC K ++ LL + + DT +YN +
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L ++ + G P+ +TC ++ L
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 212/453 (46%), Gaps = 24/453 (5%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ IKP Y I+ L + + S A + E+ E
Sbjct: 227 GDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE--------K 278
Query: 164 DVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+F DL + C D + G E+ + ++ L+ P++V+ + L+N +K
Sbjct: 279 GIFPDLFTYNCMID---GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKF 335
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++Y+EM GI PNT T+N + FCK +D + +G PD+ T+NTL
Sbjct: 336 FEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTL 395
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I YC R++D L M ++ D TY TL++G C G + A L +M+ G+
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGV 455
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGY 390
PDIV+ NTL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 456 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL 515
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
EG+ L A L E+ G+ + Y +I LC+ +R AT + + +G + P +
Sbjct: 516 INEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDV 575
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+N L+ CK V D L L EM R I TY LI F +G A+ + E
Sbjct: 576 VTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQE 635
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
M+ SG+ PD+ R ++ ++++ +A A+L
Sbjct: 636 MISSGVYPDTITIRSMLTVLWSKEELKRAVAML 668
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 213/438 (48%), Gaps = 12/438 (2%)
Query: 182 KVGLIRESFKTFRKTLDVG-FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+G + RK ++ +P++V + +++GL K +Y EM GI P+
Sbjct: 225 KIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDL 284
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N + FC +G + L+++ E +P++VTY+ LI++Y K+ + +A LY
Sbjct: 285 FTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDE 344
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R ++P+ +TY ++++G CK+ ++ A +F+ M +G SPD+ ++NTLI YC +
Sbjct: 345 MLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKR 404
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + LL+EM G+ DT T ++ G+ G L +AL+L ++ GV +
Sbjct: 405 IDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 464
Query: 421 LIVALCQDNRPFAATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADA 469
L+ LC + + A + + + + +G P ++ YN L+ L +A
Sbjct: 465 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEA 524
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L EM R I P+ TY ++I C R EA + D M PD L++G
Sbjct: 525 EELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSG 584
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
YC V+ L ++ + D +Y + + F + G+++ +++ + + G P+
Sbjct: 585 YCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644
Query: 590 NLTCKYMIHSLWKGMERK 607
+T + M+ LW E K
Sbjct: 645 TITIRSMLTVLWSKEELK 662
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 124/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+CN LL+GL + ++++ M +
Sbjct: 437 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + +++ G P+ +TY+++I+ CK+ RL
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ PD+VT+ TL++G CK G+V + +LF M RG+ D ++Y TL
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I + K G + + + EM+ +G+YPDT T + ++ + L A+ ++ +LQ
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 120/222 (54%), Gaps = 14/222 (6%)
Query: 162 SVDVFQDLISCTED----CNWAYVKVGLIRESFKTFRKT---LDV-----GFQPSIVSCN 209
S V D+++C C+ +K L E FK +K+ LD G +P + + N
Sbjct: 452 SSGVCPDIVTCNTLLDGLCDNGKLKDAL--EMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L++GL+ + ++Y+EM GI PNT T++ + + CK +D+ + + +
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
F PD+VT+NTL+S YCK GR++D L+ M RR ++ D +TY TL++G K G + A
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGA 629
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+F M+ G+ PD ++ +++ + +++ + ++L ++
Sbjct: 630 LDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 197/401 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++ + N L+N LN + + V ++ ++G P+ TF L C G + +
Sbjct: 95 GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 154
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ +EGF P++VTY TLI+ CK G + A L R M + N PD+V YT++++
Sbjct: 155 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDS 214
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF +MV +G+SPDI +Y +L+ A C + + +LL +M+ + I PD
Sbjct: 215 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 274
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG++ A +V + + GV Y L+ C + A + +
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFD 334
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G+ P + Y L+ CK + A+ L +EM + P TY L+ C +G
Sbjct: 335 MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVG 394
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ G +PD +L++ C + + +A ALL D + YN
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYN 454
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + G+L +L G P+ T MIH L
Sbjct: 455 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 215/465 (46%), Gaps = 19/465 (4%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVD--VFQDLIS--CTEDCNWAYVKVGLIRESFKTFRK 195
N+ FA +L ++++L H D F LI C E G I E+ F K
Sbjct: 114 NRVGFAFSVLAKILKL----GHQPDPTTFTTLIRGLCVE---------GKIGEALHLFDK 160
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
+D GFQP++V+ L+NGL K+ ++ M + P+ + + CK+
Sbjct: 161 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 220
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
V + ++ +G PD+ TY +L+ + C L M +LPD+V ++T
Sbjct: 221 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 280
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
+++ LCKEGKV EAH++ M+ RG+ PD+V+Y TL+ +C + +M E+ + M+ G
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD + ++ GY K ++ A+ L E+ R Y+ L+ LC R A
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+L + G +P L Y+ L++SLCK + +A+ L + N+ P + Y +I
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G A L + G+ P ++I+G C +N+A L D
Sbjct: 461 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 520
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+YN + F ++ + + ++L + L GF+ + +C M+ L
Sbjct: 521 CTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD--SCFLMLSVL 563
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 180/387 (46%), Gaps = 4/387 (1%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N +D + + + P+ F L K V +++ G P++
Sbjct: 41 LHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV 100
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C R+ AF + + + PD T+TTL+ GLC EGK+ EA LF +
Sbjct: 101 YTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDK 160
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P++V+Y TLI CK G + LL M PD I+ K+ +
Sbjct: 161 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 220
Query: 396 LLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A NL ++ G IS DI+ Y L+ ALC T+LL ++ +P + I+
Sbjct: 221 VTEAFNLFSQM--VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ ++++LCK V +A + D M+ R ++P + TY L+ C EAV + D M+
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G PD LINGYC ++KA L +K I DT++YN + G L
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ L + G P+ +T ++ SL
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSL 425
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 9/402 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D +P Y +++ L S A+++L + + +C V ++ +I
Sbjct: 163 DEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ--GNCQPDVVIYTSIID------- 213
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K + E+F F + + G P I + L++ L L + +M I P
Sbjct: 214 SLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILP 273
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ F+ + CK G V + + ++ + + G +PD+VTY TL+ +C + +++A ++
Sbjct: 274 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 333
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R+ PD+++YTTL+NG CK K+ +A LF M + PD +YNTL++ C
Sbjct: 334 DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++Q++ +L +EM+ G PD T I++ K L A+ L+ ++ ++ +Y
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I +C+ AA L + G PS+ YN ++ LCK + +A L EM
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDG 513
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ P TY + F + A+ L++EML G DS
Sbjct: 514 NDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 202/426 (47%), Gaps = 12/426 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ N LL+GL + + + ++ +M PN TF L +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMN 192
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G + + L+++ E+G P +TY T++ CK G A L R M +++
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHII 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++ LCK+G+ +A LF M +G+ PD+ +YN++I +C G+ +++ L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ G+ + Y +I C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCK 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + + G P+L +N L++ C + D + L EM + + +T
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTT 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI F +G A+ L+ EM+ SG+ PD C L++G C + A +
Sbjct: 433 YNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQ 492
Query: 548 KKFQIYDT-----------ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K + D ++YN + + +G + EL + G P+ +T M
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 597 IHSLWK 602
I L K
Sbjct: 553 IDGLCK 558
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 197/399 (49%), Gaps = 1/399 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V L+ ++++ D +Y++M R I + ++F IL FC +
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 136
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD+VT+NTL+ C + R+++A L+ M+ P++VT+TTLMNGLC+
Sbjct: 137 FGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG++ EA L RM+ GL P ++Y T++ CK G + LL +M + I P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVV 256
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ K+GR A NL E+Q G+ Y+ +IV C R A LL+ +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRL 376
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G P+ LI+GYC K ++ LL + + DT +YN +
Sbjct: 377 DAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTL 436
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L + + G P+ +TC ++ L
Sbjct: 437 IHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGL 475
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 209/451 (46%), Gaps = 20/451 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE--------K 284
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+F DL + + G ++ + ++ L+ P +V+ N L+N +K +
Sbjct: 285 GIFPDLFT-YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++Y+EM GI PNT T++ + FCK +D + +G P+L+T+NTLI
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
YC R++D L M ++ D TY TL++G G + A L M+ GL P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYGK 392
DIV+ +TL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
EG+ L A L E+ G+ Y +I LC+ +R AT + + +G + P++
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L+ CK V D L L EM R I + TY LIC F +G A+ + EM+
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 246/546 (45%), Gaps = 57/546 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L ++ S A+ + ++ E C +V F
Sbjct: 133 ALSTFGKITK-LGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT--CRPNVVTFTT 189
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN--------- 219
L++ + G I E+ + ++ G QP+ ++ +++G+ K+
Sbjct: 190 LMN-------GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLL 242
Query: 220 -----------------------CID----QCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
C D ++ EM GI P+ T+N + FC
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G L+++ E PD+VTYN LI+++ K+G+ +A LY M R ++P+ +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTIT 362
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+++++G CK+ ++ A +F+ M +G SP+++++NTLI YC ++ + LL+EM
Sbjct: 363 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMT 422
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ DT T ++ G+ G L +AL+L+ E+ G+ D L+ LC + +
Sbjct: 423 ETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 433 AATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A + + + + +G P ++ YN L+ L +A L +EM R I
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY ++I C R EA + D M P+ LINGYC V+
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 602
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L ++ + + +Y + F + G+++ +++ + + G P+ +T + M+ LW
Sbjct: 603 LFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLW 662
Query: 602 KGMERK 607
E K
Sbjct: 663 SKEELK 668
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 184/421 (43%), Gaps = 22/421 (5%)
Query: 48 LYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV 107
+ + +P + I+D +C + D+ + K + P L + S ++ C S
Sbjct: 248 ISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN-SMIVGFCSSGRW 306
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
S + +I P Y +++ KF A ++ E+ L + + +
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEM--LPRGIIPNTITYS 364
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I + K + + F G P++++ N L++G ID ++
Sbjct: 365 SMID-------GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM G+ +T T+N L H F GD++ L+++ G PD+VT +TL+ C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 288 KGRLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
G+L DA ++++M + V PD+ TY L++GL EGK EA +L+ M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
HRG+ PD ++Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNE 455
L L E+ R G+ + Y LI + A + + + G P ++ I N
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 456 L 456
L
Sbjct: 658 L 658
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 20/331 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ N+ A M + K C ++ F LI Y
Sbjct: 356 IIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA--TKGCSPNLITFNTLID-------GYC 406
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
I + + + + G + N L++G + ++ + +EM G+CP+
Sbjct: 407 GAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIV 466
Query: 242 TFNILTHVFCKNGDV-DKVNGF--LEKIEEE--------GFDPDLVTYNTLISSYCKKGR 290
T + L C NG + D + F ++K +++ G +PD+ TYN LIS +G+
Sbjct: 467 TCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A LY M R ++PD +TY+++++GLCK+ ++ EA Q+F M + SP++V++ T
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTT 586
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YCK G++ + L EM GI + T ++ G+ K G + AL++ E+ G
Sbjct: 587 LINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSG 646
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERI 441
V ++ L A ++LE++
Sbjct: 647 VYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+C+ LL+GL + ++++ M +
Sbjct: 443 VGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASH 502
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 503 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+TTL+NG CK G+V + +LF M RG+ + ++Y TL
Sbjct: 563 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 622
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I + K G + + + EM+ +G+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 623 ICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 239/529 (45%), Gaps = 54/529 (10%)
Query: 116 VKNDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+KN L K ++ YC +V L +F +M+ E++E P V +L+
Sbjct: 272 IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF-GFVPSEAAV-SNLVD- 328
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G I +F K G PS+ N L+N + K +D+ ++ MG
Sbjct: 329 ------GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G+ PN T++IL FCK G +D FL K+ E G + Y++LIS +CK G+L
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A L+ M + P++V YT+L++G CKEG++ A +L+H M +G+SP+ ++ LI
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
C +M E+ L EM+ + P+ T ++++G+ KEG + A L+ E+ G+
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERI-GQ-------DGYVPSLEIYNELMESLCKCD 464
Y LI LC R A + + G+ +G +P++ Y L+ LCK
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIG 622
Query: 465 SVADALLLKDEMVDRNIKPSLSTY----------------------------------RA 490
+ A LL EM+ N P+ +TY
Sbjct: 623 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNI 682
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI FC +GR EA ++ M++SG+ PD +I YC D+ +A L +
Sbjct: 683 LIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRG 742
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
DT +YN + G+L+K EL+ +R G PN T +IH
Sbjct: 743 VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 259/567 (45%), Gaps = 57/567 (10%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
L H + +VL++ DS AL FFN++ +++++C+++H L +N + A +L
Sbjct: 57 LKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLL 116
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWA-----------YVKVGLIRESFKTFRKTLD 198
L+ + P + F+ + CN++ YV+ + R +D
Sbjct: 117 QTLLLRGLN-PEGL--FESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMD 173
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G P I + + +LNGL+++ +++E+ G+ P+ + + + C+ D +
Sbjct: 174 CGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIR 233
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ ++E G D + TYN I CK R+ +A + ++ + + D+ TY TL+
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 319 GLC-----------------------------------KEGKVREAHQLFHRMVHRGLSP 343
GLC K+G + A L +++ G++P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+ YN LI + CK+GK+ E++SL M G++P+ T I++ + K G+L AL+ +
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
++ G+ + Y LI C+ + AA SL + + +G P++ IY L+ CK
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ +A L EM + I P+ T+ ALI C R EA L EM+E ++P+
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME----LQK 579
VLI G+C E + +A LL +K + DT +Y + + G +S+ E LQ
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593
Query: 580 RFLRL----GFAPNNLTCKYMIHSLWK 602
+L G PN +T +I+ L K
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCK 620
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 221/482 (45%), Gaps = 31/482 (6%)
Query: 142 FSFAMKMLCELVELVK-----------DCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRE 188
++ ++ LCEL + ++ C SV + I C W V++ +
Sbjct: 218 YTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLL- 276
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
S+K R DVG C +L GL K+ + ++ EM G P+ + L
Sbjct: 277 SYKGLRA--DVG-----TYCTLVL-GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVD 328
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
K G++ + K+++ G P L YN LI+S CK G+L++A L+ M + + P
Sbjct: 329 GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP 388
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ VTY+ L++ CK GK+ A +M G+ + Y++LI +CK GK++ +KSL
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+ NG+ P+ ++ GY KEG L +A L E+ G+S + + LI LC
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
NR A L + + +P+ YN L+E CK + A L DEMV++ + P TY
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568
Query: 489 RALICCFCGIGRSGEAVSLMDEMLE--------SGMLPDSQICRVLINGYCMEKDVNKAE 540
R LI C GR EA M+++ G LP+ LING C ++KAE
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + + +Y + +G++ K ++L L GF N +T +I
Sbjct: 629 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGF 687
Query: 601 WK 602
K
Sbjct: 688 CK 689
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 190/422 (45%), Gaps = 18/422 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++ K A+ L ++ E+ +V + LIS + K+
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEV--GIKATVYPYSSLIS-------GHCKL 438
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R + F + + G +P++V L++G K + +++Y EM GI PNT+TF
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C + + N ++ E P+ VTYN LI +CK+G AF L M
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR--------GLSPDIVSYNTLIFAY 355
+ ++PD TY L++GLC G+V EA + + + G P++V+Y LI
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK G M +++ L EM+ + P+ T + EG + A+ L L G +
Sbjct: 619 CKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANT 677
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI C+ R A +L + G P Y+ ++ C+ + +A+ L +
Sbjct: 678 VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWES 737
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M++R + P Y LI C G +A L D+M+ G+ P+ LI+G C+
Sbjct: 738 MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSS 797
Query: 536 VN 537
V+
Sbjct: 798 VS 799
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF + V+ N L+ G KL I + +V M GI P+ +++ + + +C+ GD+ +
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
E + G +PD V YN LI C G L AF L M RR V P+ TY +L++G
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Query: 320 LCKEGKVREAHQLF 333
C V F
Sbjct: 792 TCLMSSVSSTADYF 805
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 219/438 (50%), Gaps = 1/438 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ DL++ + N + +G + SF K L +G+QP+ + N L+ GL + +
Sbjct: 41 IVPDLVTLSILIN-CFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++++ G + ++ IL + CK G+ L IE+ PD+V Y+T+I
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK +++A+ LY M R + PD++TYTTL+ G C G++ EA L + M+ + ++P+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
I +YNTLI CKEGK++ESK+LL M G+ PD I++ GY G + A + +
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ + GV+ Y+ +I LC+ R A +LL + +P Y+ L++ LCK
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ L L EM R +L TY +L+ C +A++L +M E G+ P+
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 399
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LI+G C + K +AL K D +Y + + ++G + + ++ +
Sbjct: 400 ALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDN 459
Query: 585 GFAPNNLTCKYMIHSLWK 602
G PN +T + +I SL +
Sbjct: 460 GCIPNAVTFEIIIRSLLE 477
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 199/403 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ + L+N L + + V ++ ++G PNT N L C G+V K
Sbjct: 40 GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS 99
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ +GF D V+Y L++ CK G A L R + R+ PD+V Y+T+++G
Sbjct: 100 LHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDG 159
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ V EA+ L+ M RG+ PD+++Y TLI +C G++ E+ LL EM+ I P+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T ++ KEG++ + NL+ + + GV IY L+ C A +
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q G P + YN ++ LCK V +A+ L EM+ +N+ P TY +LI C +G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R + L EM G + L++G C ++++KA AL ++ + +Y
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYT 399
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A+ + + G L K L + L G+ + T MI L K
Sbjct: 400 ALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCK 442
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 197/405 (48%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +++S K + GFQ VS LLNGL K+ ++ + P+ +
Sbjct: 94 GEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMY 153
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + CK+ VD+ ++ G PD++TY TLI +C G+L +AF L M
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+N+ P++ TY TL++ LCKEGKV+E+ L M +G+ PD+V Y+ L+ YC G++Q+
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK 273
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G+ PD ++ II+ G K R+ A+NL+ E+ + Y LI
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R L + + G +L YN L++ LCK ++ A+ L +M +R I+P
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY ALI C GR + +L +L G D V+I+G C E ++A A+
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMK 453
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
I + ++ + E + K +L + G P
Sbjct: 454 SKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 193/401 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I+ +L L+K+ + ++M GI P+ T +IL + FC G +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L KI + G+ P+ + NTL+ C KG + + + + + + D V+Y L+NGLCK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ R A +L + R PD+V Y+T+I CK+ + E+ L EM GI+PD T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ G+L+ A L+ E+ ++ + Y+ LI LC++ + + +LL +
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + IY+ LM+ C V A + MV + P + +Y +I C R
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA++L+ EML M+PD+ LI+G C + L + Q + +YN++
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ ++ +L K + L + G PN T +I L KG
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 141/274 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ES G +P +V + L++G + + + Q++ M + G+ P+ +
Sbjct: 232 KEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVY 291
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++NI+ + CK VD+ L ++ + PD VTY++LI CK GR+ L + M
Sbjct: 292 SYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM 351
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ R +LVTY +L++GLCK + +A LF +M RG+ P+ +Y LI CK G++
Sbjct: 352 HHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRL 411
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ ++L ++ G D +T +++ G KEG AL + +++ G + ++ +
Sbjct: 412 KKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEII 471
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
I +L + + A LL + G +P ++E
Sbjct: 472 IRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHSE 505
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 142/297 (47%)
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+P ++ + ++ L K L +M +G+ PD+V+ + LI +C G+M S S
Sbjct: 7 IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+L +++ G P+T +++G +G + +L+ ++ G + + Y L+ LC
Sbjct: 67 VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A LL I P + +Y+ +++ LCK V +A L EM R I P +
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVI 186
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LIC FC G+ EA L++EM+ + P+ LI+ C E V +++ LL
Sbjct: 187 TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVM 246
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
KK D Y+ + + + G++ K ++ ++ G P+ + +I+ L KG
Sbjct: 247 TKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
++P + + +++ SL K + L +M + I P L T LI CFC +G+ +
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF----FAKKFQIYDTESYNAV 561
S++ ++L+ G P++ I L+ G C++ +V K+ L F A+ FQ+ D SY +
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKS---LHFHDKVVAQGFQM-DQVSYGIL 121
Query: 562 FNMFAEDGD 570
N + G+
Sbjct: 122 LNGLCKIGE 130
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 215/432 (49%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + F I +C +L L+K
Sbjct: 60 AILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ +A +R+ Q+ Y L+
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 126/310 (40%), Gaps = 35/310 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ + T ++ L K + +
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 191 GDLDEGFRLKSAMLASGVQ-----------------------------------PDVYTY 215
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+ + + P+ T+ LI C GR A+ + +ML
Sbjct: 216 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + ++GDL
Sbjct: 276 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDS 335
Query: 574 LMELQKRFLR 583
E +KR ++
Sbjct: 336 AFEHRKRMIQ 345
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 123/311 (39%), Gaps = 18/311 (5%)
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIV 346
N L +Y T+++ LC + EA L +V R DI
Sbjct: 14 NFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIY 73
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
++ LI AY + G ++++ + + TC+ +++ K E+
Sbjct: 74 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEI 133
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G S ++ L+ C+D A S+ + I + G PS+ YN LM + +
Sbjct: 134 LECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ LK M+ ++P + TY LI C + +A L DEML G++P+ L
Sbjct: 194 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 253
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I+G+C V+ A + + D +YN + + GDL + L G
Sbjct: 254 IDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGL 313
Query: 587 APNNLTCKYMI 597
P+ +T +I
Sbjct: 314 KPDKITYTTLI 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + + ++
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 244/518 (47%), Gaps = 29/518 (5%)
Query: 10 SFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNF-LPETQNPN-KIVDLICS 67
S C+N +SSF+ S + ++ S + P N +P NP K DL
Sbjct: 5 STCVNRRLCYQYSSFAGYGRSENPRL-------SKNPPAANIPIPHRSNPEPKGQDLDFV 57
Query: 68 SLKKGDSHLTLLQND---LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKP 124
++ +H L+Q+D L L HL + + VLL+ Q D + + FFNW K
Sbjct: 58 NV----AHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSFEFFNWAKTRNPASH 113
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCE-LVELVKDCPHSVDVFQDLISCTEDCNWA---- 179
+ + +++H L N KF A +L + LV D P VF L+ +C+
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP--AKVFDALLYSYRECDSTPRVF 171
Query: 180 ------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
+ + R + TF + D GF P++ SCN ++ LL +D + Y EM R
Sbjct: 172 DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR 231
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
I PNT+T N++ +C++G +DK L+ +E GF V+YNTLI+ +C+KG L+
Sbjct: 232 CKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSS 291
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A L +M + + P++VT+ TL++G C+ K++EA ++F M L P+ V+YNTLI
Sbjct: 292 ALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLIN 351
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
Y ++G + + +M+ NGI D T ++ G K+ + A V EL + +
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVP 411
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ + LI+ C L + + + G P+ + +N L+ + CK + A +
Sbjct: 412 NSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVL 471
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
EMV R+I T + G+ L+ EM
Sbjct: 472 REMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEM 509
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++++ GF P + + N +SS +GR++ A YR M R + P+ T +M+G C+ G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSG 252
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ + +L M G VSYNTLI +C++G + + L M NG+ P+ T
Sbjct: 253 KLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFN 312
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ + +L A + E++ + + Y+ LI Q A E + +
Sbjct: 313 TLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + YN L+ LCK A E+ N+ P+ ST+ ALI C +
Sbjct: 373 GIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRG 432
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M+ SG P+ Q +LI+ +C +D + A +L ++ D+ + + V N
Sbjct: 433 FELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 565 FAEDGDLSKLMEL 577
G + EL
Sbjct: 493 LNHQGKDQLVKEL 505
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 112/229 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + GL+ + K G QP++V+ N L++G + + + +V+ EM + + P
Sbjct: 282 GHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPP 341
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N L + + + GD + F E + G D++TYNTLI CK+ + A
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFV 401
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + N++P+ T++ L+ G C +L+ M+ G P+ ++N LI A+CK
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKN 461
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+ +L EM+ I D+ T + G +G+ L+ E++
Sbjct: 462 EDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKELLQEME 510
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K R A F +M G P + S N + + +G++ + EM I P+T+T
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLN 242
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ GY + G+L + L+ +++R G + Y+ LI C+ +A L +G++
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKN 302
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P++ +N L+ C+ + +A + EM N+ P+ TY LI + G A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMA 362
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++M+ +G+ D LI G C + KA + K+ + ++ +++A+
Sbjct: 363 FRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMG 422
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + EL K +R G PN T +I + K
Sbjct: 423 QCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCK 460
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++E+ K F + + P+ V+ N L+NG + + ++ YE+M GI + T+N
Sbjct: 324 LQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNT 383
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK K F++++++E P+ T++ LI C + + F LY+ M R
Sbjct: 384 LILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSG 443
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P+ T+ L++ CK A Q+ MV R + D + + + +GK Q K
Sbjct: 444 CHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVK 503
Query: 366 SLLYEMMG 373
LL EM G
Sbjct: 504 ELLQEMEG 511
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 31/210 (14%)
Query: 421 LIVALCQDNRPF-AATSLLERIGQDGYVP-SLEIYNELMESLCKCDS---VADALL---- 471
+++ NR F +A S+L + +G V ++++ L+ S +CDS V D+L
Sbjct: 120 IVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFA 179
Query: 472 -LKD---------EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
LK +M D P++ + A + G GR A+ EM + P++
Sbjct: 180 HLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTY 239
Query: 522 ICRVLINGYCMEKDVNKAEALL------GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++++GYC ++K LL GF A SYN + E G LS +
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHV------SYNTLIAGHCEKGLLSSAL 293
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+L+ + G PN +T +IH + ++
Sbjct: 294 KLKNMMGKNGLQPNVVTFNTLIHGFCRAVK 323
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 72/182 (39%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++D L + AT ++ G++P++E N M SL V AL EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I P+ T ++ +C G+ + + L+ +M G LI G+C + +
Sbjct: 230 RRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLL 289
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ A L K + ++N + + F L + ++ L PN +T +
Sbjct: 290 SSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTL 349
Query: 597 IH 598
I+
Sbjct: 350 IN 351
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 220/466 (47%), Gaps = 48/466 (10%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + FS A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY+++G +R++ +R T + F +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G + + + +M+ + PD T ++ G K+G L
Sbjct: 240 EKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ P Y L+
Sbjct: 300 QAHDLIDEMSMXGLK-----------------------------------PDKITYTTLI 324
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ CK + A + M+ NI+ Y ALI C GRS +A ++ EML G+
Sbjct: 325 DGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
PD++ ++IN +C + DV K LL + + +YN + N
Sbjct: 385 PDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 158/362 (43%), Gaps = 7/362 (1%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 45 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFC 104
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CKEG ++ ++S+
Sbjct: 105 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSV 164
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV Y LI LC+
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCK 224
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+++ A L + + + G VP+ + L++ CK V A+ + +M+ +++ P L T
Sbjct: 225 ESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVT 284
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y ALI C G +A L+DEM G+ PD LI+G C E D++ A
Sbjct: 285 YNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMI 344
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS------LW 601
++ D +Y A+ + ++G ++ + L +G P+ T +I+ +W
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVW 404
Query: 602 KG 603
KG
Sbjct: 405 KG 406
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 236/512 (46%), Gaps = 46/512 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT ++ + +A ++ + LC+ +E K HS+ +I+C C
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLA-LCKQME-SKGIAHSIYTLSIMINCFCRCRK----- 138
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-IDQCWQVYEEMGRIGICPNTHT 242
+ +F T K + +G++P V N LLNGL L C + + ++ + M +G P T
Sbjct: 139 --LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC-LECRVSEALELVDRMVEMGHKPTLIT 195
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + C NG V ++++ E GF P+ VTY +++ CK G+ A L R M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
RN+ D V Y+ +++GLCK+G + A LF+ M +G DI++YNTLI +C G+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL +M+ I P+ T +++ + KEG+L A L+ E+ + G++ + Y+ LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++NR A +++ + G P + +N L+ CK + + D L L EM R +
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY L+ FC G+ A L EM+ + PD ++L++G C ++ KA +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 543 LGFFAKK-----FQIY------------------------------DTESYNAVFNMFAE 567
G K IY D +YN + +
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LSK L ++ G AP+ LT +I +
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 206/420 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + ++ GFQP+ V+ +LN + K ++ +M I + +
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+I+ CK+G +D ++E +GF D++TYNTLI +C GR +D L R M +
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++VT++ L++ KEGK+REA QL M+ RG++P+ ++YN+LI +CKE +++E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ M+ G PD T I++ GY K R+ L L E+ GV + Y+ L+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + P + Y L++ LC + AL + ++ ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C + +A L + G+ D++ ++I+ C + ++KA+ L
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ D +YN + D D + EL + GF + T K +I+ L G
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 197/413 (47%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ FR + P+++ N L + + K + + ++M GI + +T +I+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC+ + + KI + G++PD V +NTL++ C + R+++A L M
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P L+T TL+NGLC GKV +A L RMV G P+ V+Y ++ CK G+ + L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M I D II+ G K+G L +A NL E++ G Y+ LI C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R LL + + P++ ++ L++S K + +A L EM+ R I P+ T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +LI FC R EA+ ++D M+ G PD +LINGYC ++ L +
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ I +T +YN + F + G L +L + + P+ ++ K ++ L
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 201/406 (49%), Gaps = 9/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y +++++ + + + AM++L ++ E ++ + +I K
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIID-------GLCK 275
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + +F F + GF+ I++ N L+ G D ++ +M + I PN T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L F K G + + + L+++ + G P+ +TYN+LI +CK+ RL +A + +M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD++T+ L+NG CK ++ + +LF M RG+ + V+YNTL+ +C+ GK++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+K L EM+ + PD + +I++ G G L AL + ++++ + + IY +I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+C ++ A L + G YN ++ LC+ DS++ A +L +M +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P TY LI G + A L++EM SG D +++IN
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 1/389 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +GL+ + D ++ +M + P FN L K + V +++E +G
Sbjct: 60 LSSGLVGIKA-DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ T + +I+ +C+ +L+ AF + + PD V + TL+NGLC E +V EA
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L RMV G P +++ NTL+ C GK+ ++ L+ M+ G P+ T ++
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G+ A+ L+ +++ + + Y +I LC+D A +L + G+ +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ C D L +M+ R I P++ T+ LI F G+ EA L+ E
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ G+ P++ LI+G+C E + +A ++ K D ++N + N + +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ +EL + G N +T ++
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQG 447
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 161/347 (46%), Gaps = 1/347 (0%)
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D V+ F + I+ P ++ +N L S+ K + L + M + + + T + +
Sbjct: 71 DAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N C+ K+ A +++ G PD V +NTL+ C E ++ E+ L+ M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P T +V G G++ A+ L+ + G + Y ++ +C+ + A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL ++ + Y+ +++ LCK S+ +A L +EM + K + TY LI FC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
GR + L+ +M++ + P+ VLI+ + E + +A+ LL ++ +T
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+YN++ + F ++ L + +++ + G P+ +T +I+ K
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 130/278 (46%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K +A LF M+ P ++ +N L A K + + +L +M GI +T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I++ + + +L A + + ++ + G I++ L+ LC + R A L++R+ +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G+ P+L N L+ LC V+DA++L D MV+ +P+ TY ++ C G++ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L+ +M E + D+ ++I+G C + ++ A L K D +YN +
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F G +L + ++ +PN +T +I S K
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 203/400 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +VS + ++NG K +D+ + Y EM I PN T+N + CK VDK
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + G PD +TYN+++ +C G+ +A + M V PD+VTY +LM+ LCK
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ EA ++F M RGL P+I +Y TL+ Y +G + E LL M+ NGI+P+ +
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+V Y K+ ++ A+ + ++++ G++ + Y +I LC+ R A E++
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P +YN L+ LC C+ A L EM+DR I + + ++I C GR
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E+ L D M+ G+ PD LI+GYC+ +++A LL D +Y+ +
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + + + + L + G +P+ +T ++ L++
Sbjct: 446 NGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 231/479 (48%), Gaps = 7/479 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y ++++ L N+ A+++L + + DCP V + +I+ + K
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN-------GFFKE 101
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +++ T+ + LD P++V+ N ++ L K +D+ +V M + G+ P+ T+
Sbjct: 102 GDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY 161
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H FC +G + FL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 162 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 221
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++ TY TL+ G +G + E H L MV G+ P+ ++ L+ AY K+ K++E
Sbjct: 222 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEE 281
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ P+ T ++ K GR+ A+ ++ G+S +Y+ LI
Sbjct: 282 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 341
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC N+ A L+ + G + +N +++S CK V ++ L D MV +KP
Sbjct: 342 GLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKP 401
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY LI +C G+ EA L+ M+ GM PD LINGYC + A L
Sbjct: 402 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLF 461
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + + + EL + G T ++H L K
Sbjct: 462 REMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCK 520
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 172/380 (45%), Gaps = 35/380 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI PN +
Sbjct: 205 KNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 264
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+IL + K V++ K+ ++G +P+ VTY +I CK GR+ DA + M
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P + Y +L++GLC KEG+V
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ PDI++Y+TLI YC GKM E+ LL M+ G+ PD T +
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K R+ AL L E++ GVS Y+ ++ L Q R AA L I + G
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR 504
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK DAL + + ++K T+ +I +GR+ EA
Sbjct: 505 QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 564
Query: 507 LMDEMLESGMLPDSQICRVL 526
L +G++P+ R++
Sbjct: 565 LFVAFSSNGLVPNYWTYRLM 584
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 154/310 (49%), Gaps = 3/310 (0%)
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNT 350
DA +++ + RR + PD+ +Y L+NGLC E + +EA +L H M G PD+VSY+T
Sbjct: 35 DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I + KEG + ++ S EM+ I P+ T I+ K + A+ ++ + + G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
V Y+ ++ C +P A L+++ DG P + YN LM+ LCK +A
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ D M R +KP ++TY L+ + G E L+D M+ +G+ P+ + +L+ Y
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
++ V +A + ++ + +Y AV + + G + M ++ + G +P N
Sbjct: 274 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333
Query: 591 LTCKYMIHSL 600
+ +IH L
Sbjct: 334 IVYNSLIHGL 343
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 163/343 (47%), Gaps = 11/343 (3%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S V A+ +F + D + P + Y ++H L NK+ A +++ E+++ C
Sbjct: 309 CKSGRVEDAMLYFEQMI-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICL 366
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+++ F +I ++ K G + ES K F + +G +P I++ + L++G
Sbjct: 367 NTI-FFNSIID-------SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 418
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++ M +G+ P+ T++ L + +CK + ++E G PD++TYN
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ + R A LY + + +L TY +++GLCK +A ++F +
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L + ++N +I A K G+ E+K L NG+ P+ +T +++ + +G L
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 598
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
L + ++ G ++ + ++++ L Q A + L I +
Sbjct: 599 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 641
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 233/484 (48%), Gaps = 12/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
+L + P + L+VH + A+ L + + D ++ N
Sbjct: 201 ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTM--------QGFGLSPDAVTYNTLLN- 251
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + G++ E+ + G P+ + N L++ +L I Q +V E M G P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLN-DAFY 296
+ T+N+L C+ G VD+ +++E G PD+VTYNTL+ + C K R + DA
Sbjct: 312 DLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDA-CFKWRCSSDALR 370
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M + V P LVT+ ++ LCKEGK+ EA ++ GL+PD+++YNTLI AYC
Sbjct: 371 LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYC 430
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + ++ +L+ EM+G G+ DTFT ++ K R A L+ + G
Sbjct: 431 KAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEV 490
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y ++ A ++ P A L +++ + +PS+ YN L++ LC+ + + +A+ +E
Sbjct: 491 SYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEF 550
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V++ + P +TY +I +C G A ++M+E+ PD C L+NG C+ +
Sbjct: 551 VEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKL 610
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+KA L + +K + D +YN + + GD+ + G P+ T +
Sbjct: 611 DKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVV 670
Query: 597 IHSL 600
+ +L
Sbjct: 671 LSAL 674
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 207/440 (47%), Gaps = 40/440 (9%)
Query: 200 GFQPSIVSCNFLLNGLLK-LNCIDQC-WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
G +PS+ + N +L+ L + + + Q V+ + + + PN +TFN+L H C G +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
L ++ G PD VTYNTL++++C+KG L +A L M R + P TY TL+
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM--MGNG 375
+ + G +++A ++ M G PD+ +YN L C+ GK+ E+ L EM +G
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTA 345
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+ PD T +V K AL L+ E++ GV + ++ ++ +LC++ + A
Sbjct: 346 L-PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
LE+I ++G P + YN L+++ CK +VA A L DEMV + +K T ++
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464
Query: 496 CGIGRSGEAVSLM-----------------------------------DEMLESGMLPDS 520
C + R +A L+ D+M+E ++P
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LI G C + + +A L F +K + D +YN + + + ++GDL +
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ F P+ +TC +++ L
Sbjct: 585 MVENSFKPDVVTCNTLMNGL 604
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 204/454 (44%), Gaps = 36/454 (7%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L + S FR +++ P+ + N L++ + M G+ P+ T+N
Sbjct: 188 LPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYN 247
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L + C+ G + + L +++ +G P TYNTL+S++ + G + A + M
Sbjct: 248 TLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAY 307
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS-PDIVSYNTLIFA--------- 354
PDL TY L GLC+ GKV EA +L M G + PD+V+YNTL+ A
Sbjct: 308 GFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSD 367
Query: 355 --------------------------YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
CKEGK++E+ L ++ G+ PD T ++
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
Y K G + A L+ E+ G+ + + ++ LC+ R A LL Q G+VP
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
Y +M + K + AL L D+M++R + PS+STY LI C + R EA+ +
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+E +E G++PD ++I+ YC E D+ A + D + N + N
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L K ++L + ++ G + +T +I S+ K
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 187/427 (43%), Gaps = 36/427 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K + G P +++ N L++ K + + + + +EM G+ +T
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T N + + CK + L + GF PD V+Y T++++Y K+ A L+ M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P + TY TL+ GLC+ +++EA + V +GL PD +YN +I AYCKEG +
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + +M+ N PD TC ++ G G+L AL L G + D+ Y
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKV--DVITY- 632
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
N L++S+CK V AL D+M + +
Sbjct: 633 --------------------------------NTLIQSMCKVGDVDTALHFFDDMEVKGL 660
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P TY ++ GRS EA +++ ++ +SG L S C +L E DV + E
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEG 720
Query: 542 LL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++K Q E+Y N G L + + ++ G + T ++ L
Sbjct: 721 KPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780
Query: 601 WKGMERK 607
K +R+
Sbjct: 781 IKRQKRQ 787
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 183/437 (41%), Gaps = 67/437 (15%)
Query: 101 RCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKD 158
RC SD++ L D +KPT + ++V L K A+ L ++ E L D
Sbjct: 363 RCSSDALRLLEEMR----DKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPD 418
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
V + LI AY K G + ++F + + G + + N +L L K+
Sbjct: 419 ----VITYNTLID-------AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ ++ + G P+ ++ + + K + + +++ E P + TY
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTY 527
Query: 279 NTLIS-----------------------------------SYCKKGRLNDAFYLYRIMYR 303
NTLI +YCK+G L +AF + M
Sbjct: 528 NTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVE 587
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+VT TLMNGLC GK+ +A +LF V +G D+++YNTLI + CK G +
Sbjct: 588 NSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDT 647
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +M G+ PD FT +++ + GR A N++ +L G +S+ L+
Sbjct: 648 ALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG-KLSQSFACPLLK 706
Query: 424 ALCQD--------NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
D +P A +S QD +LE Y E + LC + +A + DE
Sbjct: 707 PSSADEADVKEHEGKPEAESS---EKAQDN---ALETYMERLNGLCTGGQLKEAKAVLDE 760
Query: 476 MVDRNIKPSLSTYRALI 492
M+ + + STY L+
Sbjct: 761 MMQKGMPVDCSTYITLM 777
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 97/244 (39%), Gaps = 48/244 (19%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ-DLISCTEDCNWAYVK 182
P + Y +I+H A + ++VE + F+ D+++C N +
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVE---------NSFKPDVVTCNTLMNGLCLH 607
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + ++ K F ++ G + +++ N L+ + K+ +D +++M G+ P+ T
Sbjct: 608 -GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGF------------------------------- 271
+N++ + G ++ + L K+ + G
Sbjct: 667 YNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAES 726
Query: 272 -----DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
D L TY ++ C G+L +A + M ++ + D TY TLM GL K K
Sbjct: 727 SEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK- 785
Query: 327 REAH 330
R+ H
Sbjct: 786 RQTH 789
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 224/438 (51%), Gaps = 1/438 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+L++C N + ++GLI +F F K L +G+ P ++ L GL I Q +
Sbjct: 119 NLVNCNILIN-CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLF 177
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++++ +G + ++ L H CK G+ L++++ P++V YNT+I S CK
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+N+AF L+ M + + PD+VTY+ L++G C GK+++A LF++M+ + PD+ +
Sbjct: 238 VKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT 297
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N L+ A+CK+GKM+E K++ MM GI P+ T ++ GY + A ++ +
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ GV+ Y +I C+ + A +L + + + +P + Y+ L++ L K ++
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
AL L D+M DR + P++ TY +++ C + +A++L+ + + G PD +LI
Sbjct: 418 YALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C + A + K D +Y + F +G ++ + L + G
Sbjct: 478 KGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537
Query: 588 PNNLTCKYMIHSLWKGME 605
P+ T + +I SL+K E
Sbjct: 538 PDAKTYEIIILSLFKKDE 555
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 196/387 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V+CN L+N +L I + V+ ++ ++G P+T TF L+ C G + +
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ GF D ++Y TLI CK G A L + + V P++V Y T+++
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+CK V EA LF MV +G+SPD+V+Y+ LI +C GK++++ L +M+ I PD
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I+V + K+G++ + + + G+ + Y+ L+ C A S+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q G P ++ Y+ ++ CK +A+ L EM +NI P + TY +LI G
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R A+ L+D+M + G+ P+ +++ C V+KA ALL F K D +Y+
Sbjct: 415 RISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYS 474
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGF 586
+ + G L ++ + L G+
Sbjct: 475 ILIKGLCQSGKLEDARKVFEDLLVKGY 501
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 195/362 (53%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + ++ QP++V N +++ + K+ +++ + ++ EM GI P+
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVV 261
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L FC G + K+ E PD+ T+N L++++CK G++ + ++ +M
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + P+ VTY +LM+G C +V +A +F+ M G++PDI SY+ +I +CK K
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM I PD T ++ G K GR+ AL LV ++ GV + Y+ +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC+ ++ A +LL + G+ P + Y+ L++ LC+ + DA + ++++ +
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ Y +I FC G EA++L+ +M ++G +PD++ ++I + + + AE
Sbjct: 502 NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561
Query: 542 LL 543
LL
Sbjct: 562 LL 563
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 194/417 (46%), Gaps = 4/417 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ F + L P N +L L+K + ++M GI PN NI
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC+ G + KI + G+ PD +T+ TL C KG++ AF + +
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
D ++Y TL++GLCK G+ R A L R+ + P++V YNT+I + CK + E+
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIV 423
L EM+ GI PD T ++ G+ G+L A++L ++ +I D+Y + L+
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM--ILENIKPDVYTFNILVN 303
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C+D + ++ + + + G P+ YN LM+ C V A + + M + P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ +Y +I FC I + EA++L EM ++PD LI+G ++ A L+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +YN++ + + + K + L +F GF P+ T +I L
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 184/384 (47%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D ++ + R P FN + K+ V +K+E G P+LV
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N LI+ +C+ G + AF ++ + + +PD +T+TTL GLC +G++++A ++V
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G D +SY TLI CK G+ + + LL + GN + P+ I+ K +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +L E+ G+S Y LI C + A L ++ + P + +N L+
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ CK + + + D M+ + IKP+ TY +L+ +C + +A S+ + M + G+ P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D Q ++ING+C K ++A L +K I D +Y+++ + ++ G +S ++L
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ G PN T ++ +L K
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCK 447
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 163/335 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KV L+ E+F F + + G P +V+ + L++G L + ++ +M I P+ +
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVY 296
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL + FCK+G + + + + ++G P+ VTYN+L+ YC +N A ++ M
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ +Y+ ++NG CK K EA LF M + + PD+V+Y++LI K G++
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ +M G+ P+ T I+ K ++ A+ L+ + + G Y L
Sbjct: 417 SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSIL 476
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LCQ + A + E + GY + Y +++ C +AL L +M D
Sbjct: 477 IKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGC 536
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
P TY +I + A L+ EM+ G+
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 173/364 (47%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +++ + F N DVD ++ P +N ++ S K + YL
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R + P+LV L+N C+ G + A +F +++ G PD +++ TL C +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++Q++ +++ G + D + ++ G K G +AL+L+ + V + +Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I ++C+ A L + G P + Y+ L+ C + DA+ L ++M+
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
NIKP + T+ L+ FC G+ E ++ D M++ G+ P+ L++GYC+ K+VNK
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+++ A+ D +SY+ + N F + + M L K R P+ +T +I
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408
Query: 599 SLWK 602
L K
Sbjct: 409 GLSK 412
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 142/267 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G ++E F + G +P+ V+ N L++G + +++ ++ M + G+ P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +++I+ + FCK D+ +++ + PD+VTY++LI K GR++ A L
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R V P++ TY ++++ LCK +V +A L + +G PDI +Y+ LI C+
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+++++ + +++ G D + I++QG+ EG AL L+ +++ G Y
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDG 445
+ +I++L + + A LL + G
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARG 570
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y V + ++ F G P I S + ++NG K+ D+ +++EM R I P
Sbjct: 339 GYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIP 398
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ L K+G + ++++ + G P++ TYN+++ + CK +++ A L
Sbjct: 399 DVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ PD+ TY+ L+ GLC+ GK+ +A ++F ++ +G + D+ +Y +I +C E
Sbjct: 459 TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G E+ +LL +M NG PD T +II+ K+ A L+ E+ G+ + + Y
Sbjct: 519 GLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPL--NFY 576
Query: 419 DYLIVALCQ 427
D + L Q
Sbjct: 577 DLYLTRLAQ 585
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 9/185 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++ L+ + + S+A++++ ++ + + P ++ + ++ A
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD--RGVPPNICTYNSILD-------ALC 446
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + ++ K D GFQP I + + L+ GL + ++ +V+E++ G + +
Sbjct: 447 KTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVY 506
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ I+ FC G ++ L K+E+ G PD TY +I S KK + A L R M
Sbjct: 507 AYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Query: 302 YRRNV 306
R +
Sbjct: 567 IARGL 571
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 235/486 (48%), Gaps = 13/486 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + Y +IV L K A ++ +++E + C + + LI+
Sbjct: 41 VNPDVATYTIIVDRLCRAGKVDEADELFHKMIE--RGCSANTVAYNALIN-------GLC 91
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K I ++K + G++P ++ N +L+GL ++ + + Q ++ M G P+
Sbjct: 92 KDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 151
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIE--EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+N L K G V + G + ++ + PDL+TYNTLI +C+ + ++A L++
Sbjct: 152 AYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFK 211
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ + +PD VTY +++ GL ++ + EA ++F +MV G +P+ +Y+ ++ +C+ G
Sbjct: 212 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVG 271
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
M L EM PD C ++ K ++ A ++ E+ + G Y+
Sbjct: 272 NMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYN 331
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+ N A L + +G P + Y+ ++ LCK + V DA +L D M++R
Sbjct: 332 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 391
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P + T+ L+ C G+ EA L+D M E +LPD C L++G C +K ++A
Sbjct: 392 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEA 451
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG--FAPNNLTCKYMI 597
L + +K + D +N V +G L++ + K ++ F+P+ +T ++
Sbjct: 452 VRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Query: 598 HSLWKG 603
++L +
Sbjct: 512 NALIEA 517
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 196/406 (48%), Gaps = 2/406 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF+P +V+ + +++GL K + + ++ EEM G+ P+ T+ I+ C+ G VD+
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ K+ E G + V YN LI+ CK + A+ L M + PD +TY T+++G
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL--YEMMGNGIY 377
LC+ GKV EA Q F M RG SPD+V+YN L+ A KEGK+ E+ L +M +
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD T ++ G+ + + A+ L ++ G Y+ +++ L + + A +
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+++ G P+ Y+ ++ C+ ++A L L +EM ++ P + A+I C
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+ +A +++EM + G +PD +L++G C V+KA L D S
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
Y+ V N + + L R + P+ +T ++ L K
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 410
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 180/353 (50%), Gaps = 2/353 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ +V E+ K F+ + G+ P V+ N +L GL + + +D+ +++++M G P
Sbjct: 196 GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAP 255
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++I+ C+ G++ + E++ E+ F PD++ N +I CK +++DA +
Sbjct: 256 NGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVL 315
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + +PD+VTY L++GLCK V +AH+LF MV G +PDIVSY+ ++ CK
Sbjct: 316 EEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKT 375
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ +++ L M+ + PD T I++ G K G+L A +L+ + V
Sbjct: 376 NKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTC 435
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV- 477
L+ LC+D R A L + + + G V + +N ++ LC+ +A ALL MV
Sbjct: 436 TTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVK 495
Query: 478 -DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
D P + TY L+ GR +AV +M SG PD L+NG
Sbjct: 496 SDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNG 548
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 180/374 (48%), Gaps = 2/374 (0%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M G P+ T++ + CK G V + +E++ E+G +PD+ TY ++ C+ G+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+++A L+ M R + V Y L+NGLCK+ + A++L M +G PD ++YNT
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
++ C+ GK+ E+K M G PD ++ KEG++ A L +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 411 VSISRDI--YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ D+ Y+ LI C+ + A L + + GY+P YN ++ L + ++ +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A + +MVD P+ +TY ++ C +G + L +EM E PD +C +I+
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
C K V+ A +L +K + D +YN + + + + K EL + G AP
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Query: 589 NNLTCKYMIHSLWK 602
+ ++ +++ L K
Sbjct: 361 DIVSYSVVLNGLCK 374
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 141/268 (52%), Gaps = 2/268 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + ++ K + +G P +V+ N LL+GL K N +D+ +++ M G P+
Sbjct: 304 KAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 363
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+++++ + CK V +++ E PD+VT+N L+ CK G+L++A L +M
Sbjct: 364 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVM 423
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
NVLPD VT TTLM+GLC++ + EA +LF MV +G D++ +N ++ C+EGK+
Sbjct: 424 SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKL 483
Query: 362 QESKSLLYEMM-GNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ M+ +G + PD T +V + GR+ A++ ++ G + Y+
Sbjct: 484 AQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYN 543
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYV 447
L+ L + R A L + + + G++
Sbjct: 544 TLMNGLRKQGRHIQADRLTQAMKEKGFL 571
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K L+ ++ + F +D G P IVS + +LNGL K N + +++ M + P+
Sbjct: 339 KTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVV 398
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL CK G +D+ L+ + E PD VT TL+ C+ R ++A L++ M
Sbjct: 399 TFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYM 458
Query: 302 YRRNVL-------------------------------------PDLVTYTTLMNGLCKEG 324
+ + PD+VTYTTL+N L + G
Sbjct: 459 VEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAG 518
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+V +A F +M G +PD V+YNTL+ K+G+ ++ L M G D F
Sbjct: 519 RVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 214/445 (48%), Gaps = 9/445 (2%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
CP V F L+ A K G + ES + F K L G P++ + N + GL K
Sbjct: 292 CP-DVTTFNKLVH-------ALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+D+ ++ + R G+ P+ T+N + C+ V + L K+ GF+P+ TY
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N++I YCKKG + DA + + + PD TY +L+NG C++G +A +F +
Sbjct: 404 NSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+GL P I+ YNTLI C++G + + L+ EM G PD +T +I+ G K G L
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSD 523
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +L+ + G Y+ L+ C+ + +A L+ R+ G P + YN L+
Sbjct: 524 ANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLN 583
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LCK + + + M ++ P++ TY +I C + EAV L+ EM G+ P
Sbjct: 584 GLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTP 643
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMEL 577
D LI G+C D++ A L K++ + + T +YN + + F+E ++ + L
Sbjct: 644 DVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRL 703
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G P+N T + +I K
Sbjct: 704 FSEMKKNGCDPDNYTYRVLIDGFCK 728
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 216/456 (47%), Gaps = 35/456 (7%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + G I+E+ TF + PS+ S N ++N L++ +Q +VY M + +
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224
Query: 240 THTFNILTHVFCKNG-----------------------------------DVDKVNGFLE 264
+T+ I FC+ G D D+ +
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ E PD+ T+N L+ + CKKG + ++ L+ + +R V P+L T+ + GLCKEG
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ A +L + GL PD+V+YNT+I C++ ++ E++ L++M+ G P+ FT
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I+ GY K+G ++ A ++ + G Y L+ CQD P A ++ +
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G PS+ +YN L++ LC+ + AL L +EM ++ KP + TY +I C +G +A
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L+ + + G +PD L++GYC + ++ A L+ + D +YN + N
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ ++ME+ K G APN +T +I SL
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 174/334 (52%), Gaps = 1/334 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ F+ L G +PSI+ N L+ GL + I Q+ EM G P+ T+N++
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK G + N + +G PD+ TYNTL+ YC++ +L+ A L M+ + +
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD++TY TL+NGLCK K E ++F M +G +P+I++YNT+I + C K+ E+ L
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDIYDYLIVALC 426
L EM G+ PD + ++ G+ K G L A L +++ + VS + Y+ +I A
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFS 692
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A L + ++G P Y L++ CK +V E +++ PSL+
Sbjct: 693 EQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLT 752
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
T+ ++ C C + EAV ++ M++ ++PD+
Sbjct: 753 TFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 36/380 (9%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P +V+ N ++ GL + + + + + +M G PN T+N + +CK G V
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
N L+ +GF PD TY +L++ +C+ G + A +++ + + P ++ Y TL+ G
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC++G + A QL + M +G PDI +YN +I CK G + ++ L+ + + G PD
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
FT +V GY ++ +L SA+ LV + G++ Y+ L+ LC+ + + +
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P++ YN ++ESLC V +A+ L EM + + P + ++ LI FC +G
Sbjct: 600 AMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVG 659
Query: 500 ---------RSGE---------------------------AVSLMDEMLESGMLPDSQIC 523
R E A+ L EM ++G PD+
Sbjct: 660 DLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTY 719
Query: 524 RVLINGYCMEKDVNKAEALL 543
RVLI+G+C +VN+ L
Sbjct: 720 RVLIDGFCKTGNVNQGYKFL 739
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 185/385 (48%), Gaps = 3/385 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++ ++ + + + GF+P + L+NG + DQ V+++ G+ P
Sbjct: 409 GYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRP 468
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L C+ G + + ++ E+G PD+ TYN +I+ CK G L+DA +L
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ +PD+ TY TL++G C++ K+ A +L +RM +G++PD+++YNTL+ CK
Sbjct: 529 GDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKT 588
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +E + M G P+ T I++ ++ A++L+ E++ G++ +
Sbjct: 589 AKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSF 648
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNELMESLCKCDSVADALLLKDEMV 477
LI C+ A L + + V + YN ++ + + ++ AL L EM
Sbjct: 649 GTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMK 708
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P TYR LI FC G + + E +E G +P ++N C+E V
Sbjct: 709 KNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQ 768
Query: 538 KAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ +K + DT N +F
Sbjct: 769 EAVGIIHLMVQKDIVPDT--VNTIF 791
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 154/356 (43%), Gaps = 16/356 (4%)
Query: 246 LTHVFC-KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L VFC K DV N L K ++GF L TY +++ G+ N+ L M R
Sbjct: 89 LVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEM-RS 147
Query: 305 NVLPDLV--TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
N+ L+ Y M ++GK++EA F RM P + SYN ++ + G
Sbjct: 148 NLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFN 207
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + M + D +T I ++ + + GR +AL L+ + G + Y ++
Sbjct: 208 QAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVV 267
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+ A L + + + P + +N+L+ +LCK V ++ L D+++ R +
Sbjct: 268 TGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVC 327
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P+L T+ I C G AV L+ + G+ PD +I G C + V +AE
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEEC 387
Query: 543 L------GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L GF F +YN++ + + + G + + K + GF P+ T
Sbjct: 388 LHKMVNGGFEPNDF------TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFT 437
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 212/433 (48%), Gaps = 20/433 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P++ Y ++H L N F A ++ ++ + CP S + +I A
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNR--RGCPPSPVTYNVMID-------ASC 404
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ +K ++ G P +V+ N +++GL K + +++ ++ EM R+G PN
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464
Query: 242 TFNILT---------HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+ N + C+ G +D+ L+++ ++G PD+VTY+TLIS C R++
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
DA +L M +R P +VT TL++GLCK G+++EA ++ MV G SPD+V+YNTL+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+C+ G+ + ++ LL +M+ G+ P+ T +V G K RL A + +++ G +
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI+ C + L + G P +Y L LCK A AL +
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704
Query: 473 KDEMVD--RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
E + R+ YR + G+ A+ + +M+ G LP + C L+ G
Sbjct: 705 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 764
Query: 531 CMEKDVNKAEALL 543
C +A A+L
Sbjct: 765 CKSGQGGEARAVL 777
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 205/429 (47%), Gaps = 15/429 (3%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE------MGRIGIC 237
G + ++ + R D P VS +L+GL K +++ +++ +
Sbjct: 226 GQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSP 285
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ +NI+ C+N +D+ EK+ E PD +Y LI K G+LNDA L
Sbjct: 286 PSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNL 345
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ + V P V YT+L++GLC +A +LF M RG P V+YN +I A CK
Sbjct: 346 FQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 405
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G ++E+ L+ +M+ +G PD T ++ G K R+ AL L E++R G + +R
Sbjct: 406 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465
Query: 418 YDYLIVALCQDNRPFAATS---------LLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ +I+ LCQ ++ A LL+R+ DG+VP + Y+ L+ LC V D
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L ++MV R KP++ T LI C GR EA ++D M+ SG PD L++
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
G+C +A LL + + +Y A+ + + L + + + G AP
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645
Query: 589 NNLTCKYMI 597
N T +I
Sbjct: 646 NLFTYTALI 654
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 209/444 (47%), Gaps = 18/444 (4%)
Query: 177 NWAY-------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+W+Y K G + ++ F+K L G PS V+ L++GL N D +++
Sbjct: 323 SWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 382
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M R G P+ T+N++ CK G +++ ++K+ E+G PD+VTYNT++ CK
Sbjct: 383 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 442
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE---------GKVREAHQLFHRMVHRG 340
R+ +A L+ M R P+ ++ T++ GLC++ GK+ EA +L RM G
Sbjct: 443 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDG 502
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+V+Y+TLI C ++ +++ LL +M+ P T ++ G K GR+ A
Sbjct: 503 HVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAR 562
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + G S Y+ L+ C+ + A LL + G P++ Y L+ L
Sbjct: 563 EVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGL 622
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + + +A + +M P+L TY ALI FC G+ + L EM+ +G+ PD
Sbjct: 623 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 682
Query: 521 QICRVLINGYCMEKDVNKAEALL--GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ L C +A +L G + + + + E Y + E G + +
Sbjct: 683 VVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFV 742
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ +R G P C ++ L K
Sbjct: 743 RDMVRGGQLPAPERCASLVAGLCK 766
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 198/518 (38%), Gaps = 121/518 (23%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD----- 257
P + +FL + L +++ +Q+ E M N+ +NI+ CK VD
Sbjct: 112 PYFATSSFLAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALEL 167
Query: 258 ---------------------------KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
+++ L+ E +P LVT N L+ +C +G+
Sbjct: 168 ARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQ 227
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR----------------------- 327
++ A L R M PD V+Y T+++GLCK G+V
Sbjct: 228 VDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPS 287
Query: 328 ------------------EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
EA Q+F +M R +SPD SY LI K GK+ ++++L
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+++ +G+ P T ++ G A L ++ R G S Y+ +I A C+
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE-------------- 475
A L++++ +DG+VP + YN +M+ LCK V +ALLL +E
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467
Query: 476 ------------------------------MVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
M D P + TY LI C I R +A
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 527
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+++M++ P LI+G C + +A +L Q D +YN + +
Sbjct: 528 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGH 587
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
G + EL + G APN +T ++ L K
Sbjct: 588 CRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 625
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 151/373 (40%), Gaps = 16/373 (4%)
Query: 235 GICPNTHTFNILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
GI P F + +C G + V F + EE P YN LI S K+
Sbjct: 5 GIFPAPLLFTSVIQGWCNVGRTFEAVKIF--SLMEECHSPYPDVYNVLIDSLSKRQETEA 62
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ ++M R PD T+TT++ GLCK GK+ EA + M R + P + + L
Sbjct: 63 VKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAH 122
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C G M+ + LL E+M ++ I+V K R+ AL L + + +
Sbjct: 123 ELCLRGSMERAFQLL-EIM---PVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPL 178
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ D ++V L R A L+ ++ P L N L+E C V A L
Sbjct: 179 AAGSLDSVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELL 235
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM-DEMLESGMLPDSQIC-----RVLI 527
M D P +Y ++ C GR EAV L D L S S ++I
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C +++A + ++ D+ SY + + A+ G L+ L ++ L G
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355
Query: 588 PNNLTCKYMIHSL 600
P+ + +IH L
Sbjct: 356 PSTVAYTSLIHGL 368
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 143/367 (38%), Gaps = 56/367 (15%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAH--------EISRVLLRCQ 103
+P+ N ++D +C S + ++ L + + P+ +H + S++ CQ
Sbjct: 425 VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 484
Query: 104 SDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ A + +D + P Y ++ L + A +L ++V+ + C +
Sbjct: 485 RGKLDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVK--RQCKPT 541
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
V LI K G I+E+ + + G P +V+ N L++G + +
Sbjct: 542 VVTQNTLI-------HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 594
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++ +M G+ PN T+ L CK + + G +++ G P+L TY LI
Sbjct: 595 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 654
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR------- 335
+C G+++ L+ M + PD V Y TL LCK G+ A ++
Sbjct: 655 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 714
Query: 336 ------------------------------MVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
MV G P +L+ CK G+ E++
Sbjct: 715 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEAR 774
Query: 366 SLLYEMM 372
++L E+M
Sbjct: 775 AVLEEIM 781
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 5/213 (2%)
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M GI+P ++QG+ GR A+ + L S D+Y+ LI +L +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVK-IFSLMEECHSPYPDVYNVLIDSLSKRQE 59
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A +++ + G P + ++ LCK + +A L+ DEM R I P +T
Sbjct: 60 TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L C G A L++ M + +S +++ C V+ A L ++K
Sbjct: 120 LAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKR 175
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
S ++V + G + + +++ + R
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRR 208
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 179/650 (27%), Positives = 283/650 (43%), Gaps = 148/650 (22%)
Query: 86 LLP-HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
LLP H+ A +L+ Q D + AL FN VK + K + Y I+ L ++ F
Sbjct: 5 LLPKHVAA------VLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVA 58
Query: 145 AMKMLCE--------LVELV-----------KDCPHSVDVFQ--DLISCTEDCNWAY--- 180
+L E L+E V +VDVF+ D +C E +Y
Sbjct: 59 MENVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNC-EPSVLSYNAI 117
Query: 181 ----VKVGLIRESFKTFRKTLDVGFQPSIVSCNF----------------LLNGLL---- 216
V+ G +++ K F + +VG P + + LLN ++
Sbjct: 118 MNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGC 177
Query: 217 KLNCIDQC---------------WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+LN + C ++++ +M RIGI P+ TFN L H CK G+V +
Sbjct: 178 QLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESER 237
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L K+ ++G +L T+N I C+KG L+ A + + R + PD+VTY TL+ GLC
Sbjct: 238 LLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLC 297
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K V EA + H++V+ GL PD +YNTLI YCK G +Q ++ +L + G PD F
Sbjct: 298 KNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEF 357
Query: 382 T--------CQ---------------------------IIVQGYGKEGRLLSALNLVVEL 406
T CQ ++++G +EG +L AL ++ E+
Sbjct: 358 TYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEM 417
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK---- 462
G S Y+ +I LC+ A +L+ GYVP + +N L++ CK
Sbjct: 418 SENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKM 477
Query: 463 ---------------------CDSVADAL--LLKDE--------MVDRNIKPSLSTYRAL 491
+SV + L +K+E MV++ P+ TY L
Sbjct: 478 ETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNIL 537
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
C G+ EA+ L+DE+L G+ PD+ +I+G+ D+ A L ++++
Sbjct: 538 TESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYK 597
Query: 552 I-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMI 597
+ + T +YN + N FAE DL +K FL +G AP+ T + MI
Sbjct: 598 VSHTTATYNIMINAFAEKLDLHM---GEKLFLEMGAGGCAPDTYTYRVMI 644
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 166/335 (49%), Gaps = 1/335 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I + F L G +P+++ N L+ GL + I Q Q+ EM G + T+N+
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + CK G V N + +G+ PD+ T+NTLI YCK+ ++ + M+
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V PD++TY +++NGL K K + + F MV +G P+ ++YN L + CK GK+ E+
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDYLIVA 424
L+ E++ GI PDT + I+ G+ G L A L + +++ VS + Y+ +I A
Sbjct: 552 DLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINA 611
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ L +G G P Y +++ C + EM+++ PS
Sbjct: 612 FAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPS 671
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
L+T+ +I C C R EAV ++ M+ +G++P+
Sbjct: 672 LTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 142/591 (24%), Positives = 253/591 (42%), Gaps = 50/591 (8%)
Query: 48 LYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV 107
YN P + N I++++ S +H L+ ++P + I R+ C++
Sbjct: 104 FYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI-RIKSFCRTKRP 162
Query: 108 -SALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
SAL N V ++ + YC +V N A ++ +++ + +
Sbjct: 163 HSALRLLNNMVSQGCQLNAVA--YCTVVAGFYEENYRVEAYELFNDMLR--------IGI 212
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F D +S K G ++ES + K L G ++ + N + GL + +
Sbjct: 213 FPD-VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAM 271
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + + R G+ P+ T+N L CKN +V + +L K+ G +PD TYNTLI Y
Sbjct: 272 SMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGY 331
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK G L +A + + + +PD TY +L+NGLC+ ++ A LF+ + +GL P +
Sbjct: 332 CKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTV 391
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNG------------------------------ 375
+ YN LI C+EG + ++ ++ EM NG
Sbjct: 392 ILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMND 451
Query: 376 -----IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
PD FT ++ GY K+ ++ + + ++ ++ GV+ Y+ ++ L + +
Sbjct: 452 AIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVK 511
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
E + + G VP+ YN L ESLCK V +AL L DE++++ I P ++
Sbjct: 512 NEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFAT 571
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC-RVLINGYCMEKDVNKAEALLGFFAKK 549
+I F G A L M E + + ++IN + + D++ E L
Sbjct: 572 IISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAG 631
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
DT +Y + + F G+ + + GF P+ T +I+ L
Sbjct: 632 GCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 171/360 (47%), Gaps = 14/360 (3%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
CQ+D + AL FN +KPT Y +++ L A++M+ E+ E C
Sbjct: 367 CQNDEIDRALALFNAALGK-GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSE--NGCS 423
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ + +I+ K+G + ++ + G+ P + + N L++G K
Sbjct: 424 SDIWTYNLVIN-------GLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
++ Q+ +M G+ P+ T+N + + K + + E + E+G P+ +TYN
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR- 339
L S CK G++N+A L + + + PD V++ T+++G G ++ A+QLF RM +
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
+S +YN +I A+ ++ + + L EM G PDT+T ++++ G+ G S
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
++E+ G S + +I LC +R A ++ + +G VP E+ N + E+
Sbjct: 657 YKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP--EVVNSISEA 714
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 198/387 (51%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
V +P++V +++ L K ID+ +++ EM GI P+ ++ + H C G +
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
G ++ +EG P++VT+N LI + CK G++ +A +L ++M +R PD TY TL++
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G C EG++ +A LF M +G+ D VSYN LI YCK G+M E+K L EMM I P
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
T ++ G +EG++ A NL E++ ++ Y+ L+ LC++N A L
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELF 471
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + PS++I+N L++ LCK + A L + + ++P++ TY +I C
Sbjct: 472 HYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKS 531
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ A L M E G P+ L+ G+C ++ K LL A+K D +
Sbjct: 532 GQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTI 591
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLG 585
+ V ++ ++D + + L F G
Sbjct: 592 SIVVDLLSKDEKYREYLHLLPTFPAQG 618
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 209/423 (49%), Gaps = 6/423 (1%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM----GRIGIC--PN 239
I E+ RK + +G++P++V+ LLNGL +++EEM G G+ PN
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPN 237
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ + CK+G +DK +++ G PD+V Y+++I C GR A L+
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M V P++VT+ L++ LCK GK+ EA+ L M+ RG SPD +YNTLI +C EG
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG 357
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ +++ L M GI D + +++ GY K GR++ A L E+ + + Y+
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYN 417
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L ++ + A +L + P YN L++ LCK + +++A+ L + +
Sbjct: 418 TLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ +PS+ + LI C + A L + + G+ P+ V+I+G C + A
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L +K + ++N + F ++ ++ K++EL + F+P+ T ++
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL 597
Query: 600 LWK 602
L K
Sbjct: 598 LSK 600
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 200/430 (46%), Gaps = 6/430 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K+ + +++ +G P ++ N L+N LN +D V EM R G P
Sbjct: 101 AVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSP 160
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT TF L C + + G L K+ G+ P++VTY TL++ C G A L+
Sbjct: 161 NTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLH 220
Query: 299 RIMYRRN------VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
M N + P+LV Y T+++ LCK+G + + +LF M RG+SPD+V+Y+++I
Sbjct: 221 EEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSII 280
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
C G+ + +K L EM+ G++P+ T +++ K G++ A +L+ + + G S
Sbjct: 281 HGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGES 340
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
Y+ LI C + R A L + G YN L+ CK + +A L
Sbjct: 341 PDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKL 400
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM+ + I P++ TY L+ G+ +A +L EM + P+S +L++G C
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+++A L + + +N + + + + EL R G PN +T
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 593 CKYMIHSLWK 602
MIH L K
Sbjct: 521 YTVMIHGLCK 530
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 182/347 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GLI + + F + G P +V+ + +++G+ + ++ EM G+ PN
Sbjct: 250 KDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVV 309
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L CK G +++ N L+ + + G PD TYNTLI +C +GR++DA L+ M
Sbjct: 310 TFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM 369
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + D V+Y L+NG CK G++ EA +L+ M+ + + P +++YNTL+ +EGK+
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +L EM + + P++ T I++ G K L A+ L L+ S I++ L
Sbjct: 430 RDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCL 489
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A L R+ +G P++ Y ++ LCK + +A L M ++
Sbjct: 490 IDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGC 549
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P+L T+ L+ FC + V L+ EM E PD+ ++++
Sbjct: 550 APNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVD 596
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 199/447 (44%), Gaps = 20/447 (4%)
Query: 160 PHSVDVFQDLISCTED-----------CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
P + + +D +S D C ++K E+F F +D+ P I S
Sbjct: 39 PGPISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRS---EAFSVFNHLIDMQPTPPISSF 95
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LL + K+ +Y+ M IG+ P+ T NIL + +C VD L ++
Sbjct: 96 NTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLR 155
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P+ VT+ +L+ C R+++A L R M R P++VTY TL+NGLC G
Sbjct: 156 RGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTML 215
Query: 329 AHQLFHRMVHRG------LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
A +L M++ + P++V Y T+I + CK+G + + K L EM G GI PD
Sbjct: 216 AVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVA 275
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G GR A L E+ GV + ++ LI ALC+ + A LL+ +
Sbjct: 276 YSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMI 335
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
Q G P YN L++ C + DA L M + I+ +Y LI +C GR
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMV 395
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L EM+ ++P L+ G E V A L G ++ +YN +
Sbjct: 396 EAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILL 455
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++ LS+ MEL F P+
Sbjct: 456 DGLCKNNHLSEAMELFHYLENHDFQPS 482
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 117/225 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+ K +R+ + P++++ N LL GL + + W ++ EM + P
Sbjct: 387 GYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP 446
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NIL CKN + + +E F P + +N LI CK ++ A L+
Sbjct: 447 ESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELF 506
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + P+++TYT +++GLCK G++ A LF M +G +P++V++NTL+ +C+
Sbjct: 507 NRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN 566
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+MQ+ LL EM PD T I+V K+ + L+L+
Sbjct: 567 DEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLL 611
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 8/298 (2%)
Query: 308 PDLVTYTTLMNGLCKEGKVR--EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD + CK G ++ EA +F+ ++ +P I S+NTL+ A K + +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
SL M G+ PD T I++ Y ++ L ++ E+ R G S + + L+ L
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN----- 480
C +R AT LL ++ + GY P++ Y L+ LC + A+ L +EM++ N
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232
Query: 481 -IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
IKP+L Y +I C G + L EM G+ PD +I+G C A
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ L + + ++N + + + G + + L K ++ G +P+ T +I
Sbjct: 293 KGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
Query: 456 LMESLCKCDSV--ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
++S CK + ++A + + ++D P +S++ L+ I R + +SL M
Sbjct: 61 FLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL 120
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD +LIN YC V+ A+LG ++ +T ++ ++ +S+
Sbjct: 121 IGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISE 180
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
L ++ +R+G+ PN +T +++ L
Sbjct: 181 ATGLLRKMVRMGYRPNVVTYGTLLNGL 207
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 204/403 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS ++NG K D+ + Y EM GI P+ T+N + CK +DK
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G PD +TYN+++ YC G+ +A + M V PD+VTY+ LM+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL P+I +Y TL+ Y +G + E LL M+ NGI+PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ I++ Y +G++ A+ + ++++ G++ + Y +I LC+ R A E
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P +YN L+ LC C+ A L EM+DR I + + ++I C G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L + M+ G+ P+ LINGYC+ +++A LL +T +Y+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + + + + L K G +P+ +T ++ L++
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 213/435 (48%), Gaps = 1/435 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++S T N + K G +++ T+ + LD G P +V+ N ++ L K +D+ +V
Sbjct: 195 DVVSYTTVIN-GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M + G+ P+ T+N + H +C +G + GFL+K+ +G +PD+VTY+ L+ CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR +A ++ M +R + P++ TY TL+ G +G + E H L MV G+ PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
++ LI AY +GK+ ++ + +M G+ P+ T ++ K GR+ A+ ++
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G+S +Y+ LI LC N+ A L+ + G + +N +++S CK V
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ L + MV +KP++ TY LI +C G+ EA+ L+ M+ G+ P++ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
NGYC + A L D +YN + + + EL R G
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 588 PNNLTCKYMIHSLWK 602
T ++H L K
Sbjct: 614 IELSTYNIILHGLCK 628
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 203/464 (43%), Gaps = 47/464 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGI 236
+ G + F + GF+ ++ LL GL C D+ V M +G
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTELGC 154
Query: 237 CPNTHTFNILTHVFC--------------------------------------KNGDVDK 258
PN ++NIL C K GD DK
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ + G PD+VTYN++I++ CK ++ A + M + V+PD +TY ++++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G C G+ +EA +M G+ PD+V+Y+ L+ CK G+ E++ + M G+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++QGY +G L+ L+ + R G+ ++ LI A + A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVF 394
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ Q G P+ Y ++ LCK V DA+L ++M+D + P Y +LI C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+ A L+ EML+ G+ ++ +I+ +C E V ++E L + + +Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + N + G + + M+L + +G PN +T +I+ K
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 35/380 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ +
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+IL + G VD+ K+ ++G +P+ VTY +I CK GR+ DA + M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P + Y +L++GLC KEG+V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ P++++YNTLI YC GKM E+ LL M+ G+ P+T T +
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K R+ AL L E++ GVS Y+ ++ L Q R AA L RI + G
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK DAL + + ++K T+ +I +GR+ EA
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 507 LMDEMLESGMLPDSQICRVL 526
L +G++P+ R++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM 692
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P+ T+ IL C+ G +D L + ++GF D + + L+
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M +P++ +Y L+ GLC E + +EA +L H M G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+VSY T+I + KEG ++ S +EM+ GI PD T I+ K + A+
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV Y+ ++ C +P A L+++ DG P + Y+ LM+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R +KP ++TY L+ + G E L+D M+ +G+ PD
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y + V++A + ++ + +Y AV + + G + M ++
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G +P N+ +IH L
Sbjct: 432 MIDEGLSPGNIVYNSLIHGL 451
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 215/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ DC +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH--------- 274
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ + L++ L K + ++++ M + G+
Sbjct: 275 --GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G PD ++ LI +Y +G+++ A
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAML 392
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + P+ VTY ++ LCK G+V +A F +M+ GLSP + YN+LI C
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K + ++ L+ EM+ GI +T I+ + KEGR++ + L + R GV +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVI 512
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + A LL + G P+ Y+ L+ CK + DAL+L EM
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C K
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ A + + ++N + + + G + +L F G PN T + M
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 597 IHSL 600
++
Sbjct: 693 AENI 696
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 181/387 (46%), Gaps = 21/387 (5%)
Query: 64 LICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
LIC+ +G +L Q L P GA + + C+S V A+ +F +
Sbjct: 377 LICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA----VIGILCKSGRVEDAMLYFEQM 432
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
D + P + Y ++H L NK+ A +++ E+++ C +++ F +I
Sbjct: 433 I-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTI-FFNSIID----- 484
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ K G + ES K F + +G +P++++ N L+NG +D+ ++ M +G+
Sbjct: 485 --SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PNT T++ L + +CK ++ +++E G PD++TYN ++ + R A
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
LY + +L TY +++GLCK +A Q+F + L + ++N +I A
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+K L NG+ P+ +T +++ + +G L L + ++ G ++
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQ 443
+ ++++ L Q A + L I +
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDE 749
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 214/424 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y + I +F F K L +G+QP I++ L+ GL + + ++ + GI
Sbjct: 93 SYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKL 152
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++ L + CK G L KIE E PD+V YNT+I CK + DAF LY
Sbjct: 153 DHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLY 212
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ + V P++VTYT+L+ G C G++ +A L + MV + ++P++ ++NTL+ CKE
Sbjct: 213 CEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKE 272
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM+E+KSL+ MM G+ PD FT ++ GY A N+ + + GV+ Y
Sbjct: 273 GKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSY 332
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I L + A L E + + +P + Y+ L++ LCK + AL DEM D
Sbjct: 333 SVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHD 392
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R P++ TY +LI C + +A++L+ ++ + G+ + +L++G C + +
Sbjct: 393 RGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTD 452
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ + K D +Y+ + N ++ + + L + G P+ + + +I+
Sbjct: 453 AQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIIN 512
Query: 599 SLWK 602
+ ++
Sbjct: 513 AFFE 516
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 184/363 (50%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + RK +P +V N +++GL K + + +Y EM + PN
Sbjct: 166 KIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVV 225
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + FC G +DK G L ++ + +P++ T+NTL+ CK+G++ +A L +M
Sbjct: 226 TYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVM 285
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ TY LM+G + +A +F+ M G++ D+ SY+ +I K +
Sbjct: 286 MKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKML 345
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L M + PD ++ G K GR+ SAL V E+ G + Y L
Sbjct: 346 DEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSL 405
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+ ++ A +LL++I G ++ YN L++ LCK + DA + +++ +
Sbjct: 406 IDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 465
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAE 540
+ TY +I C EA++L+ +M + G +PD+ +IN + EKD+N KAE
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF-FEKDMNDKAE 524
Query: 541 ALL 543
LL
Sbjct: 525 KLL 527
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 203/452 (44%), Gaps = 35/452 (7%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ +F + L + P I+ +L L+K +++ M GI N T NI
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + +C ++ KI + G+ PD++TY TLI C G++ ++ + + +
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 306 VLPDLVTYTTLMNGLCKEGK-----------------------------------VREAH 330
+ D V+Y TL+NGLCK G+ VR+A
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L+ M + + P++V+Y +LI+ +C G++ ++ LL EM+ + P+ T +V G
Sbjct: 210 DLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGL 269
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
KEG++ A +LV + + GV Y+ L+ A ++ + Q G +
Sbjct: 270 CKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDV 329
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ ++ L K + +A+ L + M + N+ P + Y +LI C GR A+ +DE
Sbjct: 330 HSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDE 389
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M + G P+ LI+ C V+KA ALL + + +YN + + +DG
Sbjct: 390 MHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGR 449
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L+ ++ + L G + +T MI+ L K
Sbjct: 450 LTDAQKVFQDLLMKGHNVDVVTYSIMINGLCK 481
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 35/329 (10%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+R++F + + + P++V+ L+ G + +D+ + + EM + PN TFN
Sbjct: 204 LVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFN 263
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY------------------- 285
L CK G + + + + +EG PD+ TYN L+ Y
Sbjct: 264 TLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM 323
Query: 286 ----------------CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
K L++A L+ M NV+PD+V Y++L++GLCK G++ A
Sbjct: 324 GVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSA 383
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ M RG P++++Y +LI A CK ++ ++ +LL ++ GI + +T I+V G
Sbjct: 384 LKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDG 443
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K+GRL A + +L G ++ Y +I LC+++ A +LL ++ G VP
Sbjct: 444 LCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPD 503
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVD 478
Y ++ + + D A L EM+D
Sbjct: 504 AIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 107/198 (54%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ ++ E+ F + P +V+ + L++GL K I+ + +EM G PN
Sbjct: 341 KMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVI 400
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L CK+ VDK L+KI+++G ++ TYN L+ CK GRL DA +++ +
Sbjct: 401 TYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDL 460
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ D+VTY+ ++NGLCKE EA L +M +G PD ++Y T+I A+ ++
Sbjct: 461 LMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMN 520
Query: 362 QESKSLLYEMMGNGIYPD 379
+++ LL EM+ Y D
Sbjct: 521 DKAEKLLREMIDCVDYKD 538
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 203/426 (47%), Gaps = 16/426 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +GF P++V+ N LL+GL + I + ++ +M + PN TF L +
Sbjct: 135 ALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMN 190
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G V + L+++ E+G P+ +TY T++ CK G A L R M +++
Sbjct: 191 GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHII 250
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y T+++GL K+G+ +AH LF M + + PDIV+YN +I +C G+ +++ L
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ + S Y +I C+
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCK 370
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + G P + +N L+ C+ V D + L EM + + + T
Sbjct: 371 QNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 430
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI FC +G A L+ EM+ SG+ P+ C L++G C + A +
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 548 K-KFQI----------YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K K I D ++YN + +G + EL + G P+ +T M
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 597 IHSLWK 602
I L K
Sbjct: 551 IDGLCK 556
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 22/452 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQE--------K 282
Query: 164 DVFQDLISCTEDCNW-AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
++F D++ T +C + G ++ + ++ L+ P +V+ + L+N +K
Sbjct: 283 EIFPDIV--TYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFF 340
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM I P+T T++ + FCK +D +G PD++T+NTLI
Sbjct: 341 EAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLI 400
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ YC+ R++D L M ++ + +TYTTL++G C+ G + A L M+ G+
Sbjct: 401 AGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC 460
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
P++V+ NTL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 461 PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLI 520
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + + +G + P +
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVV 580
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ CK V D L L EM R I TY LI F + A+ + EM
Sbjct: 581 TFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEM 640
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 641 ISSGVYPDTITIRNMLTGLWSKEELERAVAML 672
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 243/545 (44%), Gaps = 63/545 (11%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L PT + ++H L ++ S A+ + ++ C +V F
Sbjct: 135 ALSTFGKITK-LGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM------CKPNVVTFTT 187
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G + E+ + L+ G QP+ ++ +++G+ K+ +
Sbjct: 188 LMN-------GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 240
Query: 229 EEMGRIG-ICPNTHTFNILTHVFCKNG-DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+M + I PN +N + K+G D N F+E E+E F PD+VTYN +I+ +C
Sbjct: 241 RKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF-PDIVTYNCMINGFC 299
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
GR +DA L + M R + PD+VT++ L+N KEGK EA +L+ M+ R + P V
Sbjct: 300 ISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y+++I +CK+ ++ ++ + Y G PD T ++ GY + R+ + L+ E+
Sbjct: 360 TYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 419
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ + Y LI CQ AA LL+ + G P++ N L++ LC +
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKL 479
Query: 467 ADALLLKDEM------VD-----RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
DAL + M +D ++P + TY LIC G+ EA L +EM G
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 516 MLPDS--------QICR---------------------------VLINGYCMEKDVNKAE 540
++PD+ +C+ LI GYC V+
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGL 599
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L ++ + D +Y + F + ++ +++ + + G P+ +T + M+ L
Sbjct: 600 ELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659
Query: 601 WKGME 605
W E
Sbjct: 660 WSKEE 664
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 197/399 (49%), Gaps = 5/399 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS++ L+ ++++ D ++++M + + N ++F IL FC +
Sbjct: 79 PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + GF P +VT+NTL+ C + R+++A L+ M + P++VT+TTLMNGLC+
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCR 194
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG+V EA L RM+ GL P+ ++Y T++ CK G + +LL +M + I P+
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ G K+GR A NL +E+Q + Y+ +I C R A LL+ +
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + ++ L+ + K +A L DEM+ R+I PS TY ++I FC R
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + G PD LI GYC K V+ LL + + +T +Y +
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F + GDL+ +L + + G PN +TC ++ L
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 148/332 (44%), Gaps = 55/332 (16%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P++ Y ++ N+ A M + K C + F LI+ Y
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMF--YLTPTKGCSPDIITFNTLIA-------GYC 404
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ + + K + + G + ++ L++G ++ ++ + +EM G+CPN
Sbjct: 405 RAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVV 464
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEE-----------GFDPDLVTYNTLISSYCKKGR 290
T N L C NG + + +++ G +PD+ TYN LI +G+
Sbjct: 465 TCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGK 524
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A LY M R ++PD +TY+++++GLCK+ ++ EA Q+F M + SPD+V++NT
Sbjct: 525 FLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584
Query: 351 LIFAYCKEGKMQES-------------------KSLLY----------------EMMGNG 375
LI YCK G + + +L+Y EM+ +G
Sbjct: 585 LITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSG 644
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 645 VYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 206/412 (50%), Gaps = 1/412 (0%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
R T G P +VS +++GL I + ++ EM + G+ PN T+N + H CK
Sbjct: 260 LRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCK 319
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+DK L ++ + PD VTY +I Y GR +A +++ M R ++PD+VT
Sbjct: 320 ARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVT 379
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ +LM+ LCK + +EA ++FH + +G PDI+SY+ L+ Y EG+ + +L + M
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT 439
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
NGI D+ I++ + K G + AL + E++ GVS + Y +I ALC+ R
Sbjct: 440 DNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLA 499
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI-KPSLSTYRAL 491
A L ++ G P+ +Y+ L++ C + A L EM+D+ I +P+++ + ++
Sbjct: 500 DAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSI 559
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C GR A + + ++ G PD LI+GYC+ ++KA +L
Sbjct: 560 IHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT 619
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +Y+ + N + + G + + L + L P +T ++ L++
Sbjct: 620 EPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRA 671
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 204/423 (48%), Gaps = 9/423 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ ++L P + +Y ++ L ++ A+ ML + + P D
Sbjct: 219 ALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSP-------D 271
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
++S T + +++ G I ++ F + + G P++V+ N +++ L K +D+ V
Sbjct: 272 VVSYTMVIHGLFME-GEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVL 330
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M I P+ T+ + H + G + +++ EG PD+VT+N+L+ S CK
Sbjct: 331 RQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
R +A ++ + + PD+++Y+ L++G EG+ + + LFH M G+ D +
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI A+ K G M E+ + EM G G+ P+ T ++ + GRL A+ + ++
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVA 467
G+ + +Y LI C A L+ + G P++ ++ ++ SLC V
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVM 570
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A + + ++ +P + T+ +LI +C +G+ +A ++D M+ +G PD LI
Sbjct: 571 NAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630
Query: 528 NGY 530
NGY
Sbjct: 631 NGY 633
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 210/493 (42%), Gaps = 49/493 (9%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I+P Y ++H + ++ A KM E+ L+ D + F L+
Sbjct: 335 DNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPD----IVTFNSLMD----- 385
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ K +E+ + F G +P I+S + LL+G ++ M GI
Sbjct: 386 --SLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
++H FNIL + K G +D+ ++ +G P++VTY T+I++ C+ GRL DA
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503
Query: 297 LYRIMYRRNVLPDLVTYTTLMNG------------------------------------L 320
M + P+ V Y +L+ G L
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C EG+V A +F+ ++H G PDI ++N+LI YC GKM ++ +L M+ G PD
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ GY K GR+ L L E+ V + Y ++ L + R AA +
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G S+ Y +++ LC+ + +A+ L ++ N+K ++ +I + R
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKR 743
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L + SG++P++ V+I E V +A+ + K + N
Sbjct: 744 REEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLND 803
Query: 561 VFNMFAEDGDLSK 573
+ M + G++ K
Sbjct: 804 IIRMLLQKGEIVK 816
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 190/392 (48%), Gaps = 1/392 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G++ E+ F + G P++V+ ++ L ++ + + +M IG+ P
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYL 297
NT ++ L FC +GD+ K + ++ ++G P++ ++++I S C +GR+ +A +
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ ++ PD+ T+ +L++G C GK+ +A + MV G PD+V+Y+TLI Y K
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + L EM+ + P T T +++ G + GR +A + E+ G ++S
Sbjct: 636 SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIST 695
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y ++ LC++N A +L ++G + I N ++ +L K +A L +
Sbjct: 696 YTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVS 755
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P+ STY +I G EA + M ++G P S++ +I + ++
Sbjct: 756 ASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIV 815
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
KA + + + + + ++FA G
Sbjct: 816 KAGYYMSKVDGTIISLEASTTSLLISLFASKG 847
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 169/387 (43%), Gaps = 72/387 (18%)
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVD--------------KVNG------------- 261
EE G + HT+ IL C+ D + +G
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYA 213
Query: 262 ---------FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIMYRRNVLPDLV 311
L ++ E G PD +YNT+I S C R +A L R+ PD+V
Sbjct: 214 KRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVV 273
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+YT +++GL EG++ +A LF+ MV +G+ P++V+YN+++ A CK M +++ +L +M
Sbjct: 274 SYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQM 333
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
N I PD T ++ GY GR A + E+ R G+ ++ L+ +LC+ R
Sbjct: 334 FDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRS 393
Query: 432 FAATSLLERIGQDGYVPSLEIY----------------NELMESLCKCDSVAD------- 468
A + I G+ P + Y N L S+ VAD
Sbjct: 394 KEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNIL 453
Query: 469 ------------ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
ALL+ EM + + P++ TY +I C +GR +A+ + +M+ G+
Sbjct: 454 INAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGL 513
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALL 543
P++ + LI G+C D+ KA+ L+
Sbjct: 514 KPNTVVYHSLIQGFCTHGDLIKAKELV 540
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 182/403 (45%), Gaps = 15/403 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F ++ + P Y ++ L + + AM+ L +++ + P++V V+
Sbjct: 466 ALLIFTEMRGQ-GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK-PNTV-VYHS 522
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCW 225
LI CT G + ++ + + +D G +P+I + +++ L +
Sbjct: 523 LIQGFCTH---------GDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQ 573
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
V+ + IG P+ TFN L +C G +DK G L+ + G +PD+VTY+TLI+ Y
Sbjct: 574 DVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGY 633
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K GR++D L+R M + V P VTY+ +++GL + G+ A ++FH M+ G + I
Sbjct: 634 FKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSI 693
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+Y ++ C+ E+ +L +++ + + ++ K R A +L
Sbjct: 694 STYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFAS 753
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G+ + Y +I+ L ++ A + + + G PS + N+++ L +
Sbjct: 754 VSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGE 813
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ A ++ I ST LI F GR E + +
Sbjct: 814 IVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 45/366 (12%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA-HQLFHR 335
TY L+ C+ R + + + R + D + T + LC + EA L HR
Sbjct: 167 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHR 226
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM-GNGIYPDTFTCQIIVQGYGKEG 394
M G PD SYNT+I + C + QE+ +L M G+G PD + +++ G EG
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQ---------------DN---------- 429
+ A NL E+ + GV + Y+ ++ ALC+ DN
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 430 ----------RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
R A + + + ++G +P + +N LM+SLCK +A + + +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
KP + +Y L+ + GR + +L M ++G++ DS +LIN + ++
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMD-- 464
Query: 540 EALLGFFAKKFQIY--DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
EALL F + Q + +Y V G L+ ME + + +G PN + +
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTV----VY 520
Query: 598 HSLWKG 603
HSL +G
Sbjct: 521 HSLIQG 526
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 238/504 (47%), Gaps = 30/504 (5%)
Query: 35 IIQDSEHKSLSNPLYNFLPETQNP---NKIVDLICSSLKKG-DSHLTLLQNDLKPLLPHL 90
+I+ S P + +P P + +D IC + + +SH L PL L
Sbjct: 12 LIEPPNKTPTSKPFFLPIPHRTIPEPRGQDLDFICVAHRHVINSHW----EKLLPLSTSL 67
Query: 91 GAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLC 150
+ +LL Q+D VS+L WV T + +++H L+ + +F K L
Sbjct: 68 TPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTLSKHRQFKTTQKFLT 127
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRES-FKT------FRKTLDV---- 199
+ L PH++ F L+ CN + L+ +S FKT FR +
Sbjct: 128 Q--TLSSHPPHTL--FDALLFSYRLCNSSS---PLVFDSLFKTLAHTNKFRHATHIYTLM 180
Query: 200 ---GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGD 255
GF P++ SCN L+ LL+L D Y E+ R + PN +T N++ +C G+
Sbjct: 181 KEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGE 240
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
V K LEK+ + G P++V++NTLIS YC KG A + +M V P++VT+ T
Sbjct: 241 VQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNT 300
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L+NG CKE K+ EA+++F+ M + P +V+YNTL+ Y + G + + EMM NG
Sbjct: 301 LINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNG 360
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+ D T ++ G K+G+ A V EL + + + + LI C N A
Sbjct: 361 LKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAF 420
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ + + G P+ + + L+ + CK + A+ + +M+ R + P LST L
Sbjct: 421 LIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGL 480
Query: 496 CGIGRSGEAVSLMDEMLESGMLPD 519
C G++ A++L EM +LPD
Sbjct: 481 CRCGKNQLALALCSEMEVRRLLPD 504
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D+ + P ++ ++ F A+K+ +VE +V F LI+
Sbjct: 253 DMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVE--NGVQPNVVTFNTLIN------- 303
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K + E+ + F + PS+V+ N LLNG ++ + +VYEEM R G+
Sbjct: 304 GFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLKA 363
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L CK+G K GF+ ++++E P+ T++ LI+ C + AF +Y
Sbjct: 364 DILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIY 423
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M R P+ T+ L++ CK A Q+ M+ R +SPD+ + + L C+
Sbjct: 424 RSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRC 483
Query: 359 GKMQESKSLLYEMMGNGIYPDTF 381
GK Q + +L EM + PD F
Sbjct: 484 GKNQLALALCSEMEVRRLLPDGF 506
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 158/385 (41%), Gaps = 55/385 (14%)
Query: 238 PNTHTFN---ILTHVFCKNGDVDKVNGFLEKI-----EEEGFDPDLVTY----------- 278
P++HT + IL H K+ FL + FD L +Y
Sbjct: 98 PSSHTLDTHSILLHTLSKHRQFKTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSPLVF 157
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
++L + + A ++Y +M P + + ++ L + + A + +
Sbjct: 158 DSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRR 217
Query: 339 RG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
R +SP++ + N +I AYC G++Q+ +L +MM G+ P+ + ++ GY +G
Sbjct: 218 RSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGL-- 275
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
FG+++ L+V ++G P++ +N L+
Sbjct: 276 -----------FGLALK---VKSLMV-------------------ENGVQPNVVTFNTLI 302
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
CK + +A + +EM N+ PS+ TY L+ + +G S V + +EM+ +G+
Sbjct: 303 NGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMRNGLK 362
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
D LI G C + KA + K+ + + +++A+ + + +
Sbjct: 363 ADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLI 422
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +R G +PN T + +I + K
Sbjct: 423 YRSMVRSGCSPNGQTFQMLISAFCK 447
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 212/421 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+VG + E F+K + P++ + +++ L + + ++ EM G PN H
Sbjct: 51 EVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIH 110
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ ++ + CK +++ L+++ E+G P + TYN LI YCK+G + A + +M
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P+ TY L+ G C++ V A L +M+ L+P +V+YN+LI CK G +
Sbjct: 171 HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYL 230
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL M NG+ PD +T + + K+GR+ A L L+ G+ + IY L
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A SLL+R+ + +P+ YN L++ LCK V +ALLL + M+ + +
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
K ++ TY LI G A ++D+M+ SG PD I I+ +C ++ +AE
Sbjct: 351 KCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAED 410
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
++ ++ + D +Y V + + G L+ ++ KR G P++ T +I L
Sbjct: 411 MMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLL 470
Query: 602 K 602
K
Sbjct: 471 K 471
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 240/501 (47%), Gaps = 30/501 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
+ F ++ D + PT Y +IVH L + + A+ + E+ E + C ++ +
Sbjct: 58 GINIFKKMRED-DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRE--RGCEPNIHTYTV 114
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I+ A K + E + + ++ G PS+ + N L++G K ++ ++
Sbjct: 115 MIN-------AMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEIL 167
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M PN T+N L FC+ +V + L K+ E P +VTYN+LI CK
Sbjct: 168 DLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKI 227
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G L+ A+ L +M V+PD TY+ ++ LCK+G++ EA+ LF+ + +G+ + V Y
Sbjct: 228 GYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIY 287
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
LI YCK GKM ++ SLL M+ P++ T ++ G KE ++ AL L+ + +
Sbjct: 288 TALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQ 347
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ + Y LIVA+ ++ A +L+++ GY P + IY + + C ++ +
Sbjct: 348 KGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKE 407
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A + M +R + P TY +I + G+G A ++ M ++G P LI
Sbjct: 408 AEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI- 466
Query: 529 GYCMEKDVNKAEALLGFFAKKFQ-IYDTESYNAVFNMFAEDGDLSKLM------ELQKRF 581
K + K E KK++ + +S VF FA+ D+ K+M EL ++
Sbjct: 467 -----KHLLKEE-----LTKKYKNVALCDSIPNVF--FADVADVWKMMKFETALELFEKM 514
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
L G +PN T +I L K
Sbjct: 515 LEHGCSPNINTYAKLIIGLCK 535
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 202/446 (45%), Gaps = 29/446 (6%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ + K L+ PS+V+ N L++G K+ +D +++ M G+ P+ T+++
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
CK G +++ N ++E+G + V Y LI YCK G+++DA L M +
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
LP+ TY L++GLCKE KV+EA L M+ +GL + +Y LI A KEG +
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+L +M+ +G PD + + + G + A +++ + GV Y +I A
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK------------CDS-------- 465
A +L+R+ G PS Y+ L++ L K CDS
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFAD 494
Query: 466 VAD---------ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
VAD AL L ++M++ P+++TY LI C +GR G A L D M E G+
Sbjct: 495 VADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGV 554
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P I L+N C A L+G + + ES N +F E+G K
Sbjct: 555 SPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKV 614
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L+ G+ + + K +I L K
Sbjct: 615 VFSNLLQCGYNDDEVAWKILIDGLLK 640
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 190/382 (49%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N ++ + V+ M + G N ++ L H C+ G VD+ +K+ E+ P + TY
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTY 77
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
++ + + GR +A L+ M R P++ TYT ++N +CKE K+ E ++ MV
Sbjct: 78 TVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVE 137
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+GL P + +YN LI YCKEG ++ ++ +L M N P+ T ++ G+ ++ +
Sbjct: 138 KGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHR 197
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A+ L+ ++ ++ S Y+ LI C+ +A LL + ++G VP Y+ ++
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFID 257
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+LCK + +A +L + + ++ IK + Y ALI +C G+ +A SL+D ML LP
Sbjct: 258 TLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+S LI+G C E+ V +A L+ +K +Y + ++GD +
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
+ + G+ P+ IH+
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAF 399
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 215/504 (42%), Gaps = 24/504 (4%)
Query: 57 NPNKIV--DLICSSLKKGDSH--LTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV-SALT 111
NPN+ +LIC +K + H + LL L+ L S + +C+ + SA
Sbjct: 176 NPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYR 235
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
N + N+ + P Y + + L + A + L E K + ++ LI
Sbjct: 236 LLNLM-NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKE--KGIKANEVIYTALID 292
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
Y K G + ++ + L P+ + N L++GL K + + + E M
Sbjct: 293 -------GYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+ G+ T+ IL K GD D + L+++ G+ PD+ Y I ++C +G +
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNI 405
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+A + +M+ R V+PD +TYT +++ G + A + RM G P +Y+ L
Sbjct: 406 KEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL 465
Query: 352 IFAYCKEGKMQESKSL-LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I KE ++ K++ L + + N + D V K + +AL L ++ G
Sbjct: 466 IKHLLKEELTKKYKNVALCDSIPNVFFAD-------VADVWKMMKFETALELFEKMLEHG 518
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S + + Y LI+ LC+ R A L + + + G PS IYN L+ C+ DA+
Sbjct: 519 CSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAV 578
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L M++ P L + L C G +A + +L+ G D ++LI+G
Sbjct: 579 RLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGL 638
Query: 531 CMEKDVNKAEALLGFF-AKKFQIY 553
+ LLG A+ QI+
Sbjct: 639 LKNGLSDGCSELLGVMEARGCQIH 662
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 155/383 (40%), Gaps = 34/383 (8%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHL---TLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
LP + N ++D +C K ++ L +++Q LK +P + I V + + D
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP---TYTILIVAMLKEGDFDY 372
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A + + + +P Y +H A M+ + E V D
Sbjct: 373 AHRILDQMVSS-GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFER--------GVMPD 423
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
++ T + AY +GL+ +F ++ D G PS + + L+ LLK ++ + Y
Sbjct: 424 ALTYTLVID-AYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLK----EELTKKY 478
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF------LEKIEEEGFDPDLVTYNTLI 282
+ + PN F DV K+ F EK+ E G P++ TY LI
Sbjct: 479 KNVALCDSIPNV--------FFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLI 530
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
CK GRL A L+ M R V P Y +L+N C+ G +A +L M+ G
Sbjct: 531 IGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHL 590
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P + S N L +EG +++K + ++ G D +I++ G K G L
Sbjct: 591 PLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSEL 650
Query: 403 VVELQRFGVSISRDIYDYLIVAL 425
+ ++ G I Y LI L
Sbjct: 651 LGVMEARGCQIHPQTYRMLIEGL 673
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 143/366 (39%), Gaps = 38/366 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P SS Y ++ L K A+ ++ +++ C +V + LI A +K
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKC--TVPTYTILIV-------AMLKE 367
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + + G+QP + ++ I + + M G+ P+ T+
Sbjct: 368 GDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG-------------- 289
++ + G ++ L+++ + G DP TY+ LI K+
Sbjct: 428 TLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI 487
Query: 290 ---------------RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+ A L+ M P++ TY L+ GLCK G++ A +LF
Sbjct: 488 PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD 547
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M RG+SP YN+L+ C+ G ++ L+ MM +G P + ++ G +EG
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEG 607
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
A + L + G + + LI L ++ + LL + G + Y
Sbjct: 608 SKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYR 667
Query: 455 ELMESL 460
L+E L
Sbjct: 668 MLIEGL 673
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/526 (27%), Positives = 239/526 (45%), Gaps = 49/526 (9%)
Query: 116 VKNDL---EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+K DL E+KP YC +V L +F ++M+ E++ L + P V L+
Sbjct: 284 IKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRL-RFSPSEAAV-SSLVE- 340
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G + E+ ++ + G P+I N L++ L K D+ +++ MG
Sbjct: 341 ------GLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMG 394
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF--------------------- 271
+IG+CPN T++IL +FC+ G +D FL ++ + G
Sbjct: 395 KIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDIS 454
Query: 272 --------------DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+P +VTY +L+ YC KG++N A LY M + ++P + T+TTL+
Sbjct: 455 AAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLL 514
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+GL + G +R+A +LF M + P+ V+YN +I YC+EG M ++ L EM+ GI
Sbjct: 515 SGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PDT++ + ++ G G+ A V L + ++ Y L+ C++ + A S+
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ +G G L Y L++ K L L EM DR +KP Y ++I
Sbjct: 635 CQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G EA + D M+ G +P+ +ING C VN+AE L + + +
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVT 754
Query: 558 YNAVFNMFAED-GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y ++ + GD+ K +EL L+ G N T +I +
Sbjct: 755 YGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCR 799
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 238/527 (45%), Gaps = 52/527 (9%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ +L+ D L FFN++ +++++C+++H L N F A +L L+
Sbjct: 73 VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANLFWPASSLLQTLLL 132
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKV-GLIRESFKTFRKTLD-----------VGFQ 202
+VF L SC E C + L+ + + R+ LD V
Sbjct: 133 RAL---KPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLL 189
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + + LL+GL+K +++++M +GI P+ + + + C+ D+ +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
+ ++E G D ++V YN LI CKK ++ +A + + + + + PD+VTY TL+ GLC
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
K GKV EA L R+ G+SP+I
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
YN LI + CK G+ + LL++ MG G+ P+ T I++ + + G+L +AL+ + E+
Sbjct: 370 YNALIDSLCK-GRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ S Y+ LI C+ AA SL+ + P++ Y LM C +
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
AL L EM + I PS+ T+ L+ G +AV L EM E + P+ V+
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
I GYC E +++KA L +K + DT SY + + G S+
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 194/443 (43%), Gaps = 35/443 (7%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L + F PS + + L+ GL K +++ + + + G+ PN +N L CK +
Sbjct: 324 LRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNF 383
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D+ +++ + G P+ VTY+ LI +C++G+L+ A M + P + Y +L
Sbjct: 384 DEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSL 443
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+NG CK G + A L M+++ L P +V+Y +L+ YC +GK+ ++ L +EM G GI
Sbjct: 444 INGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P +T ++ G + G + A+ L E+ + V +R Y+ +I C++ A
Sbjct: 504 VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFE 563
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L + + G VP Y L+ LC ++A + D + N + + Y L+ FC
Sbjct: 564 FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 497 GIGRSGEAVS-----------------------------------LMDEMLESGMLPDSQ 521
G+ EA+S L+ EM + G+ PD
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDV 683
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
I +I+ D +A + + + + +Y AV N + G +++ L +
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743
Query: 582 LRLGFAPNNLTCKYMIHSLWKGM 604
PN +T + L KG+
Sbjct: 744 RPGNSVPNQVTYGCFLDILTKGV 766
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 204/491 (41%), Gaps = 80/491 (16%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL+F + D+ +KP+ Y +++ S A ++ E++ K +V +
Sbjct: 420 TALSFLGEMI-DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMIN--KKLEPTVVTYT 476
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L+ Y G I ++ + + + G PSI + LL+GL + I ++
Sbjct: 477 SLMG-------GYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ EM + PN T+N++ +C+ G++ K FL ++ E+G PD +Y LI C
Sbjct: 530 FTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCL 589
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA------------------ 329
G+ ++A +++ N + + YT L++G C+EGK+ EA
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVC 649
Query: 330 ----------HQ-------LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
H+ L M RGL PD V Y ++I A K G +E+ + M+
Sbjct: 650 YGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 373 GNGIYPDTFTCQIIVQGYGKEG--------------------------------RLLSAL 400
G P+ T ++ G K G + + +
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDM 769
Query: 401 NLVVELQRF---GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
VEL G+ + Y+ LI C+ R A+ L+ R+ DG P Y ++
Sbjct: 770 KKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMI 829
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ + V A+ L + M ++ I+P Y LI C G G+A L +EML G+
Sbjct: 830 SELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLK 889
Query: 518 PDSQICRVLIN 528
P+++ I+
Sbjct: 890 PNTETSETTIS 900
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 221/484 (45%), Gaps = 41/484 (8%)
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
LC+ ++L P+ V LI+C N +V +F K +G QP+ V+
Sbjct: 91 LCKQMDLSNIRPN-VYTLTILINCLCHSNRDHVHF-----AFSALGKMFKLGLQPTHVTF 144
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
LLNGL I ++++E+G++G P+ T+ + CK G L+K+EE
Sbjct: 145 GTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEE 204
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFY-------------------------------- 296
+G PD+V YNT+I S CK R N+A Y
Sbjct: 205 KGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNE 264
Query: 297 ---LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
L++ M RNV+P+ VT+T L++GLCKEG + EA ++F M G+ PD +Y+ L+
Sbjct: 265 ATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMD 324
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
YC + +M E++ L M+G G P I++ G+ K RL A L+ E+ ++
Sbjct: 325 GYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTP 384
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
Y L+ CQ RP A L + + G +P Y+ L++ LCK + +A L
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL 444
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
M + I+P + Y LI C G+ A L + G+ P V+I+G E
Sbjct: 445 KAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKE 504
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
N+A + + ++ +YN F +GD S + L + + GF+ ++ T
Sbjct: 505 GLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564
Query: 594 KYMI 597
+ ++
Sbjct: 565 QMLL 568
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 197/395 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + +K + G +P +V+ N +++ L K ++ + EM GI PN
Sbjct: 188 KIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVV 247
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + H FC G +++ +++ P+ VT+ L+ CK+G + +A ++ +M
Sbjct: 248 TYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMM 307
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD TY+ LM+G C + ++ EA +LF MV +G +P + YN LI +CK ++
Sbjct: 308 TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRL 367
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+K+LL EM + PDT T ++QG+ + GR A L E+ +G+ Y L
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ A LL+ + + P + IYN L++ +C + A L + + I
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+PS+ TY +I G S EA + +M+ +G LP+S V I G+ D + A
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVR 547
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
L+ + D+ ++ + ++ + D +S+ M
Sbjct: 548 LIEEMVGRGFSADSSTFQMLLDLESNDEIISRFMR 582
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 9/370 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP Y ++ L + + + AM E+V+ + P +V + ++ +
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD--QGIPPNVVTYSSIL-------HGFCN 258
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G + E+ F++ + P+ V+ L++GL K I + +V+E M G+ P+ +T
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L +C +D+ + + +GF P + YN LI+ +CK RLN+A L MY
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY 378
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R++ PD VTY+TLM G C+ G+ + A +LF M GL PD ++Y+ L+ CK G +
Sbjct: 379 DRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLD 438
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL M + I P I++QG G+L +A L L G+ S Y +I
Sbjct: 439 EAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMI 498
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
L ++ A + ++ +G +P+ YN ++ + ++A+ L +EMV R
Sbjct: 499 SGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFS 558
Query: 483 PSLSTYRALI 492
ST++ L+
Sbjct: 559 ADSSTFQMLL 568
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 185/420 (44%), Gaps = 3/420 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
I + F T + PS ++ + L+ + + ++ I P FN
Sbjct: 15 FIHQHFTTSTAS-TTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFN 73
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR--LNDAFYLYRIMY 302
L K V ++++ P++ T LI+ C R ++ AF M+
Sbjct: 74 KLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMF 133
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P VT+ TL+NGLC + K+ +A +LF + G +P +++Y T+I CK G
Sbjct: 134 KLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTT 193
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL +M G PD ++ K+ R A+ E+ G+ + Y ++
Sbjct: 194 NALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSIL 253
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C + ATSL +++ +P+ + L++ LCK + +A + + M + ++
Sbjct: 254 HGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVE 313
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY AL+ +C + EA L D M+ G P ++ +LING+C + +N+A+ L
Sbjct: 314 PDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTL 373
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + DT +Y+ + F + G +L K G P+++T ++ L K
Sbjct: 374 LSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCK 433
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 241/511 (47%), Gaps = 25/511 (4%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
SA FF+ + +D + P Y +++ L A+ +L ++ C +V +
Sbjct: 132 TSARRFFDSMLSD-GVAPNVYTYNILIRALCGRGHRKEALSILRDMRG--AGCGPNVVTY 188
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
L++ A+ + G + + + LD G +P++V+ N ++NG+ K ++ +
Sbjct: 189 NTLVA-------AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARK 241
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
V++EM R G+ P+ ++N L +CK G + ++ ++G PD+VT+ +LI C
Sbjct: 242 VFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 301
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K G L A L R M R + + VT+T L++G CK+G + +A M + P +V
Sbjct: 302 KAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVV 361
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
YN LI YC G+M E++ LL+EM G+ PD T I+ Y K SA L ++
Sbjct: 362 CYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQM 421
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
GV Y LI LC++ R A L + + + G P Y L++ CK +V
Sbjct: 422 LEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNV 481
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS------ 520
AL L D+MV + P + TY LI R+ EA L+ ++ +P +
Sbjct: 482 ERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDAL 541
Query: 521 -QICR--------VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
CR L+ G+CM+ +N+A+ + + D Y+ + + G++
Sbjct: 542 MHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNV 601
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + K+ L+ GFAPN+ + +I L++
Sbjct: 602 MKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 207/458 (45%), Gaps = 50/458 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ K F + + G P VS N L+ G K C + V+ EM + GI P+
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L HV CK G+++ + ++ E G + VT+ LI +CKKG L+DA R M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK---- 357
+ + P +V Y L+NG C G++ EA +L H M +GL PD+V+Y+T+I AYCK
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411
Query: 358 -------------------------------EGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E ++ ++ L M+ G+ PD FT +
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL+L ++ + GV Y LI L + R A LL ++ +
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531
Query: 447 VPSLEIYNELMESLCKCDSVADALLLK---------------DEMVDRNIKPSLSTYRAL 491
+P+ Y+ LM K + + LLK M+DRN S Y L
Sbjct: 532 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 591
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C G +A+S +ML+ G P+S LI G V +A+ ++
Sbjct: 592 IHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCS 651
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D E+ A+ ++ +G++ ++++ + G P+
Sbjct: 652 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GYVPS+ YN ++ +L S+ A D M+ + P++ TY LI CG G EA
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+S++ +M +G P+ L+ + +V+ AE L+G + ++N++ N
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ G + ++ +R G AP+ ++ ++ K
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKA 268
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 15/215 (6%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + K + G P +V+ + L+NGL K + Q+ ++ P
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIP 533
Query: 239 NTHTFNILTHV---------------FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ L H FC G +++ + + + + ++ D Y+ LI
Sbjct: 534 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 593
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+C+ G + A ++ M +R P+ + +L+ GL + G V EA Q+ ++++
Sbjct: 594 GHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLA 653
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
D + LI EG + +L+ M +G+ P
Sbjct: 654 DAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 218/452 (48%), Gaps = 41/452 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y +++H L+ NN+ + AMK+L E+ + C V F D+I K
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEM--FLMGCEPDVQTFNDVIH-------GLCKA 283
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ----------------- 226
G I E+ K + L F + +L++GL ++ +D+
Sbjct: 284 GRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLI 343
Query: 227 ---------------VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+Y+ M G P+ TFNI+ CK G + FL+++ ++GF
Sbjct: 344 NGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGF 403
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+P+++TY LI +CK+G +A + M + + + V Y L+ LCK+GK+++A Q
Sbjct: 404 EPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQ 463
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
++ M +G PDI ++N+LI+ CK KM+E+ L +M+ G+ +T T ++ +
Sbjct: 464 MYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFL 523
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
+ + A LV E++ G + Y+ LI ALC+ L+E++ + PS+
Sbjct: 524 RLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSIN 583
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
N L+ S C+ V DAL +M+ R + P + TY +LI C +GR EA++L + +
Sbjct: 584 SCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGL 643
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
G+ PD+ LI+ YC E N A LL
Sbjct: 644 QAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 202/410 (49%), Gaps = 5/410 (1%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
F L G P++ + ++ +N +D + +M + G PN+ + +L H
Sbjct: 187 VFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALS 246
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+N V++ LE++ G +PD+ T+N +I CK GR+++A L+ M R+ D +
Sbjct: 247 ENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADAL 306
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE- 370
LM+GLC+ GKV EA + ++ + P+ V YNTLI Y G+ +E+K LLY+
Sbjct: 307 IQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKN 362
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ G PD FT I++ G K+G L+SAL + E+ + G + Y LI C+
Sbjct: 363 MVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGH 422
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A+ ++ + G + YN L+ +LCK + DAL + EM + KP + T+ +
Sbjct: 423 FEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNS 482
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C + EA+ L +ML G++ ++ LI+ + + + +A+ L+G +
Sbjct: 483 LIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D +YN + + G K + L ++ P+ +C +I+S
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 209/469 (44%), Gaps = 25/469 (5%)
Query: 142 FSFAMKMLCELVELVKDC------------PHSVDVFQDLISCTEDCNWAYVKVGLIRES 189
F MK C + E+ C P+S+ ++Q LI + N + E+
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSI-IYQMLIHALSENNR-------VNEA 254
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
K + +G +P + + N +++GL K I + ++++ M + L H
Sbjct: 255 MKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHG 314
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIMYRRNVLP 308
C+ G VD+ L KI +P+ V YNTLI+ Y GR +A LY+ M P
Sbjct: 315 LCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D T+ +++GLCK+G + A + MV +G P++++Y LI +CK+G +E+ ++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M G+ +T ++ K+G++ AL + E+ G ++ LI LC++
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
++ A L + +G + + YN L+ + + + + A L EM R TY
Sbjct: 491 DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITY 550
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
LI C G + + + L+++M + P C +LIN +C VN A L +
Sbjct: 551 NGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQ 610
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ D +YN++ N + G + + L G P+ +T +I
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 155/327 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + + + + GF+P++++ L++G K ++ +V M G+ NT
Sbjct: 384 KKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV 443
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L CK+G + ++ +G PD+ T+N+LI CK ++ +A LYR M
Sbjct: 444 GYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V+ + VTY TL++ + +++A +L M RG D ++YN LI A CK G
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGAT 563
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L+ +M G I+P +C I++ + + G++ AL + ++ + G++ Y+ L
Sbjct: 564 EKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A +L + G P YN L+ C DA L + V
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGF 683
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLM 508
P+ T+ LI F E +++
Sbjct: 684 IPNEITWSILINYFVKNNSDSEQFTIL 710
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 131/287 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G E+ K G + V N L+ L K I Q+Y EM G P
Sbjct: 416 GFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TFN L + CKN +++ G + EG + VTYNTLI ++ + + A L
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R D +TY L+ LCK G + L +M + P I S N LI ++C+
Sbjct: 536 GEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRT 595
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ ++ L +M+ G+ PD T ++ G K GR ALNL LQ G+ Y
Sbjct: 596 GKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTY 655
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ LI C + A LL + +G++P+ ++ L+ K +S
Sbjct: 656 NTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNS 702
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
++F + SC N ++ + G + ++ + R + G P IV+ N L+NGL K+ +
Sbjct: 577 EIFPSINSCNILIN-SFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ + GI P+ T+N L +C G + L K GF P+ +T++ LI+
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
Query: 284 SYCKKGRLNDAFYL 297
+ K ++ F +
Sbjct: 696 YFVKNNSDSEQFTI 709
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 215/448 (47%), Gaps = 8/448 (1%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
L K P + VF L+ A V++G + F + G PSI + L+N
Sbjct: 47 LRKHPPPPIFVFDKLLG-------AIVRMGHYPTAISLFSQLHSKGITPSIATLTILINC 99
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+ + + + ++G PN TFN L + FC NG V K F + +G+ D
Sbjct: 100 YCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLD 159
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+Y +LI+ CK G+ DA L + M V P+L+TY+T+++GLCK+ + +A +LF
Sbjct: 160 EFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFS 219
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+ RG+ D+V+YN+LI C G+ +E+ LL M+ I PD +T I+V KEG
Sbjct: 220 LVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEG 279
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
R++ A + + + G Y+ L+ C N A L R+ + G P + YN
Sbjct: 280 RIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYN 339
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ CK D V +A++L E+ +N+ P+L+TY +LI C +GR L+DEM +
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G PD + ++ +C K KA +L + D Y+ + F + L
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIW-PDFYMYDVIVENFCKGEKLKIA 458
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
E + L G PN T MI++L K
Sbjct: 459 EEALQHLLIHGCCPNVRTYTIMINALCK 486
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 202/460 (43%), Gaps = 41/460 (8%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S+ LI+C C+ A++ +F L +GFQP++V+ N L+NG +
Sbjct: 89 SIATLTILINCY--CHQAHLSF-----AFSLLGTILKMGFQPNMVTFNTLINGFCINGMV 141
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++ G + ++ L + CKNG L+K+EE+ P+L+TY+T+
Sbjct: 142 SKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTV 201
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I CK + DA L+ ++ R +L D+V Y +L++G C G+ REA +L MV +
Sbjct: 202 IDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNI 261
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+PD ++N L+ A CKEG++ E++ + MM G PD T +++G+ + A
Sbjct: 262 NPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARE 321
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L + + G+ Y+ LI C+ + A L + I VP+L YN L++ LC
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLC 381
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES------- 514
K ++ L DEM DR P + TY + FC +A+SL ++++
Sbjct: 382 KLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYM 441
Query: 515 ---------------------------GMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
G P+ + ++IN C + ++A LL
Sbjct: 442 YDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD 501
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
D ++ + E + K +L+ + G
Sbjct: 502 DNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 218/445 (48%), Gaps = 20/445 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+ E+F R G +P++++ N ++NGL + + + +V EM R G P
Sbjct: 27 GYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVP 86
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + +CK G+ + ++ G P++VTY +LI+S CK G LN A +
Sbjct: 87 DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF 146
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R + P+ TYTT++NG ++G + EA+++ + M G P IV+YN LI +C
Sbjct: 147 DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVL 206
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD-- 416
G+M+E+ LL +M+G G+ PD + I+ G+ + L A + VE+ G S+ D
Sbjct: 207 GRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM--IGKSVLPDAV 264
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI LC+ R A + + + P Y L+ + CK + AL L DEM
Sbjct: 265 TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM 324
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS--------QICRV--- 525
+ + P TY LI RS EA L+ ++ +P + C +
Sbjct: 325 IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFK 384
Query: 526 ----LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
L+ G+CM+ +++A+ + K + YN + + G++ K +L K
Sbjct: 385 SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM 444
Query: 582 LRLGFAPNNLTCKYMIHSLW-KGME 605
+ + F P+ +T ++ +L+ +GM+
Sbjct: 445 VHVDFVPHTVTVLALVKALFTEGMD 469
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 174/339 (51%)
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ ++EM R G PN T+N + +CK D+ GFL + +G +P+L+T+N +I+
Sbjct: 3 LRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
C+ GRL + + M R+ +PD VTY TL+NG CKEG +A L MV GLSP+
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+Y +LI + CK G + + +M G+ P+ T I+ G+ ++G L A ++
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+ R G S Y+ LI C R A LL+ + G +P + Y+ ++ +
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQ 242
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ A +K EM+ +++ P TY +LI C R EA + EML + PD
Sbjct: 243 ELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYT 302
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
LIN YC E D+NKA L +K + D +YN + N
Sbjct: 303 TLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLIN 341
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 178/349 (51%), Gaps = 6/349 (1%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
F +++E G P++VTYNT+I YCK R ++AF R M + + P+L+T+ ++NGLC
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
++G+++E ++ M +G PD V+YNTL+ YCKEG ++ L EM+ NG+ P+
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ K G L A+ ++ G+ + Y +I Q A +L +
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G++PS+ YN L+ C + +A+ L +MV + + P + +Y +I F
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESY 558
A + EM+ +LPD+ LI G C ++ + +A F + I D +Y
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEA---CDMFQEMLTIKLPPDEFTY 301
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ N + ++GDL+K + L ++ GF P+ +T +I+ L K K
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 209/429 (48%), Gaps = 15/429 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + + G P++V+ L+N + K +++ + +++M G+CP
Sbjct: 97 GYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCP 156
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ + + F + G +D+ L ++ GF P +VTYN LI+ +C GR+ +A L
Sbjct: 157 NERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL 216
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + VLPD+V+Y+T+++G + ++ A Q+ M+ + + PD V+Y++LI C++
Sbjct: 217 QDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQ 276
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E+ + EM+ + PD FT ++ Y KEG L AL+L E+ + G Y
Sbjct: 277 RRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTY 336
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK----- 473
+ LI L + R A LL ++ D +PS YN L+E+ C + + L+K
Sbjct: 337 NVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMK 396
Query: 474 ----------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ M+++N KP+ + Y +I C IG +A L EM+ +P +
Sbjct: 397 GLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTV 456
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ E + ++G + ++ D E + + ++G++ + L +
Sbjct: 457 LALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAK 516
Query: 584 LGFAPNNLT 592
G P+ T
Sbjct: 517 DGLIPSTGT 525
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/528 (27%), Positives = 242/528 (45%), Gaps = 43/528 (8%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQN-DLKPLLPHL--------GAHEISRVLLRC 102
LP N ++D C LK+ D L++ LK L P+L G R L+
Sbjct: 15 LPNVVTYNTMIDGYCK-LKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR--LKE 71
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
S+ + ++ +V +++ + YC F A+ + E+V +
Sbjct: 72 TSEVLVEMSRKGYVPDEVTYNTLVNGYC-------KEGNFHQALVLHAEMVR--NGLSPN 122
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
V + LI+ + K G + + + F + G P+ + ++NG + +D
Sbjct: 123 VVTYTSLIN-------SMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++V EM R G P+ T+N L + C G +++ G L+ + +G PD+V+Y+T+I
Sbjct: 176 EAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTII 235
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
S + + L+ AF + M ++VLPD VTY++L+ GLC++ ++ EA +F M+ L
Sbjct: 236 SGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLP 295
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD +Y TLI AYCKEG + ++ L EM+ G PD T +++ G K+ R A L
Sbjct: 296 PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355
Query: 403 VVELQRFGVSISRDIYDYLI-----------VAL----CQDNRPFAATSLLERIGQDGYV 447
+++L S Y+ LI VAL C A + E + +
Sbjct: 356 LLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHK 415
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P+ IYN ++ C+ +V A L EMV + P T AL+ G GE +
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEV 475
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
+ ++L S L D+++ +VL+ E +++ LL AK I T
Sbjct: 476 IGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPST 523
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 131/270 (48%)
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ F M G P++V+YNT+I YCK + E+ L M G+ P+ T +I+ G
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
++GRL ++VE+ R G Y+ L+ C++ A L + ++G P++
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L+ S+CK ++ A+ D+M R + P+ TY +I F G EA +++E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M SG +P LING+C+ + +A LL K + D SY+ + + FA + +
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQE 243
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + +++ + P+ +T +I L
Sbjct: 244 LDRAFQMKVEMIGKSVLPDAVTYSSLIQGL 273
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 27/264 (10%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLISCT---EDCNW-----AYVKVGLIRESFKTF 193
+S ++ LCE L + C D+FQ++++ ++ + AY K G + ++
Sbjct: 266 YSSLIQGLCEQRRLTEAC----DMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLH 321
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL------- 246
+ + GF P V+ N L+NGL K + ++ ++ P+ T+N L
Sbjct: 322 DEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNI 381
Query: 247 --------THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
FC G +D+ + E + + P+ YN +I +C+ G + A+ LY
Sbjct: 382 EFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLY 441
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + +P VT L+ L EG E +++ ++ D L+ KE
Sbjct: 442 KEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKE 501
Query: 359 GKMQESKSLLYEMMGNGIYPDTFT 382
G M +LL EM +G+ P T T
Sbjct: 502 GNMDMVFNLLTEMAKDGLIPSTGT 525
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 2/209 (0%)
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L E++R G + Y+ +I C+ R A L +G G P+L +N ++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LC+ + + + EM + P TY L+ +C G +A+ L EM+ +G+ P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ LIN C ++N+A + + +Y + N FA+ G L + +
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 579 KRFLRLGFAPNNLTCKYMI--HSLWKGME 605
R GF P+ +T +I H + ME
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRME 210
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 209/432 (48%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H + + FS A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ + AY++ G +R++ + +R T + F +C +L L+K
Sbjct: 60 AILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE G + + FNIL H FCK GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M+ V PD+ TY+ L+NGLCKE K+ A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLN 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+
Sbjct: 300 QAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I C G G+ L+ EM G
Sbjct: 360 SGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHA 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 149/354 (42%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 71 DIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ L + CKEG +R A +F + GL P +VSYNTL+ Y +
Sbjct: 131 EEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 191 GDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTF 250
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ +P L YN L+ LCK + A L DEM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSM 310
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE ++ DT +Y + N + GD+ K +L K G AP+ +T
Sbjct: 371 AEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVT 424
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 241/504 (47%), Gaps = 26/504 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L P+ + ++H L ++ S A+ ++ C +V F
Sbjct: 130 ALSTFGKI-TKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI------CKPNVIAFTT 182
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G + E+ + ++ G QP+ ++ +++G+ K+ +
Sbjct: 183 LMN-------GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 235
Query: 229 EEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M + I PN ++ + K+G +++E+G P+L TYN +I+ +C
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR ++A L R M+ R + PD+VT++ L+N L KEGK EA +L++ M+ RG+ P+ ++
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN++I + K+ ++ ++ + Y M G PD T I++ GY R+ + L+ E+
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
R G+ + Y LI CQ AA LL+ + G P++ N L++ LC +
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475
Query: 468 DAL----LLKDEMVD-------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
DAL +++ +D +++P + TY LIC G+ EA L +EM G+
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+PD+ +I+G C + +++A + K D ++ + N + + G + +E
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE 595
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSL 600
+ R G N +T + +IH
Sbjct: 596 VFCEMGRRGIVANAITYRTLIHGF 619
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 212/447 (47%), Gaps = 20/447 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ IKP Y I+ L + + + A + E+ E K ++
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQE--KGISPNL 283
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ +I+ + G E+ + R+ + P +V+ + L+N L+K +
Sbjct: 284 FTYNCMIN-------GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFE 336
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++Y EM GI PNT T+N + F K +D + +G PD++T++ LI
Sbjct: 337 AEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILID 396
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
YC R++D L M RR ++ + +TYTTL++G C+ G + A L M+ G+ P
Sbjct: 397 GYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYGK 392
++V+ NTL+ C GK++++ + M N + PD T I++ G
Sbjct: 457 NVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLIN 516
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
EG+ A L E+ G+ Y+ +I LC+ +R AT + + +G G+ P +
Sbjct: 517 EGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVT 576
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L+ CK V D L + EM R I + TYR LI FC +G A+ + EM+
Sbjct: 577 FTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKA 539
SG+ PD+ R ++ G ++++ +A
Sbjct: 637 SSGVYPDTITIRNMLTGLWSKEELKRA 663
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 202/426 (47%), Gaps = 16/426 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +GF PS+V+ + LL+GL + + + + ++ + PN F L +
Sbjct: 130 ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMN 185
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G V + L+++ E+G P+ +TY T++ CK G A L R M +
Sbjct: 186 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIK 245
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++GL K+G+ +A LF M +G+SP++ +YN +I +C G+ E++ L
Sbjct: 246 PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRL 305
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM + PD T +++ KEG+ A L E+ G+ + Y+ +I +
Sbjct: 306 LREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSK 365
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
NR AA + + G P + ++ L++ C V D + L EM R + + T
Sbjct: 366 QNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTIT 425
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI FC +G A+ L+ EM+ SG+ P+ C L++G C + A +
Sbjct: 426 YTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQ 485
Query: 548 K-KFQI----------YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K K + D ++YN + +G S+ EL + G P+ +T +
Sbjct: 486 KSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSV 545
Query: 597 IHSLWK 602
I L K
Sbjct: 546 IDGLCK 551
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 199/399 (49%), Gaps = 5/399 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P ++ LL ++++ D ++ +M I N ++F IL FC +
Sbjct: 74 PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALST 133
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + GF P LVT++TL+ C + R+++A + + + + P+++ +TTLMNGLC+
Sbjct: 134 FGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCR 189
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG+V EA L RMV GL P+ ++Y T++ CK G + +LL +M + I P+
Sbjct: 190 EGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVV 249
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ G K+GR A NL E+Q G+S + Y+ +I C R A LL +
Sbjct: 250 IYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + ++ L+ +L K +A L +EM+ R I P+ TY ++I F R
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL 369
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G PD +LI+GYC K V+ LL +++ + +T +Y +
Sbjct: 370 DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTL 429
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F + G+L+ ++L + + G PN +TC ++ L
Sbjct: 430 IHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 122/233 (52%), Gaps = 11/233 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---- 234
+ ++G + + ++ + G P++V+CN LL+GL + ++++ M +
Sbjct: 432 GFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDL 491
Query: 235 -------GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ P+ T+NIL G + E++ G PD +TYN++I CK
Sbjct: 492 DASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCK 551
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ RL++A ++ M + PD+VT+TTL+NG CK G+V + ++F M RG+ + ++
Sbjct: 552 QSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAIT 611
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
Y TLI +C+ G + + + EM+ +G+YPDT T + ++ G + L A+
Sbjct: 612 YRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 145/314 (46%), Gaps = 7/314 (2%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA L+ M R LP ++ + L+ + + + L +M R + +I S+
Sbjct: 57 LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI +C K+ + S ++ G +P T ++ G E R+ AL+ ++ +
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
V + L+ LC++ R A +LL+R+ +DG P+ Y +++ +CK AL
Sbjct: 177 VIA----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232
Query: 471 --LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
L K E V R IKP++ Y A+I GR +A +L EM E G+ P+ +IN
Sbjct: 233 NLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
G+C ++A+ LL ++ D +++ + N ++G + EL L G P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Query: 589 NNLTCKYMIHSLWK 602
N +T MI K
Sbjct: 352 NTITYNSMIDGFSK 365
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ + + + G P ++ N +++GL K + +D+ Q+++ MG G P+ TF
Sbjct: 518 GKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTF 577
Query: 244 NILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L + +CK G V D + F E + G + +TY TLI +C+ G +N A +++ M
Sbjct: 578 TTLINGYCKVGRVGDGLEVFCE-MGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMI 636
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
V PD +T ++ GL + +++ A Q
Sbjct: 637 SSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 145/546 (26%), Positives = 237/546 (43%), Gaps = 46/546 (8%)
Query: 110 LTFFNWVKNDLEIK-PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
L FF W L P + + L + F+ A +L +++ P +
Sbjct: 105 LDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVVLASIHR 164
Query: 169 LISCTEDCNWA--------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+S + + A Y K G ++++ + D G PSI CN LL LL+ +
Sbjct: 165 ALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADA 224
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ W+V E M GI P+ +T++ L +CK + D L ++ E G + VTYN
Sbjct: 225 MALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNV 284
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK------------------ 322
LI+ C+ G + +AF + M ++PD TY L+NGLCK
Sbjct: 285 LIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 344
Query: 323 -----------------EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
EG EA ++ MV G+ P+ ++Y+ L+ CK G+M +
Sbjct: 345 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 404
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL +M+ + PDT T +I++G+ + A L+ E++ G+S + Y +I L
Sbjct: 405 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 464
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
CQ P A+ LLE + G P+ +Y L+ C+ +V+ A + D+M N+ P L
Sbjct: 465 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 524
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y +LI +GR E+ +M E G+LP+ LI+GY D+ AE L+
Sbjct: 525 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 584
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG-- 603
+ Y + + + D+ K+ K L G +N +IH+L
Sbjct: 585 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 644
Query: 604 MERKFQ 609
ME F+
Sbjct: 645 MEAAFR 650
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 240/518 (46%), Gaps = 45/518 (8%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+S +V F D + P Y +++ L + + + A +L E+ +
Sbjct: 290 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS--CAELKP 347
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V V+ +LI +++ G E+FK ++ + G QP+ ++ + L+ GL K+ +
Sbjct: 348 NVVVYANLID-------GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 400
Query: 222 DQC-----------------------------------WQVYEEMGRIGICPNTHTFNIL 246
D+ +++ EM GI PN +T++I+
Sbjct: 401 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 460
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
H C++G+ +K + LE++ +G P+ Y LIS YC++G ++ A ++ M + NV
Sbjct: 461 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 520
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
LPDL Y +L+ GL K G+V E+ + F +M RGL P+ +Y+ LI Y K G ++ ++
Sbjct: 521 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 580
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L+ M+ G+ P+ +++ Y K + + + GV + IY LI L
Sbjct: 581 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 640
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
AA +L I ++G VP + +Y+ L+ LCK A + DEM + + P++
Sbjct: 641 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 700
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
Y ALI C G A ++ + +L G++P+ LI+G C D++ A L
Sbjct: 701 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 760
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMEL-QKRFLR 583
D Y+ + + GDL + M L ++ FLR
Sbjct: 761 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 798
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 188/397 (47%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P++V L++G ++ D+ +++ +EM G+ PN T++ L CK G +D+ +
Sbjct: 345 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 404
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L+++ + PD +TYN +I + + DAF L M + P++ TY+ +++GL
Sbjct: 405 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 464
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C+ G+ +A L M +GL P+ Y LI YC+EG + + + +M + PD
Sbjct: 465 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 524
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
+ ++ G K GR+ + ++Q G+ + Y LI ++ +A L++R
Sbjct: 525 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 584
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G P+ IY +L+ES K D + M+D+ + Y LI G
Sbjct: 585 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 644
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A ++ + ++G +PD + LI+G C D KA +L +KK + YNA
Sbjct: 645 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 704
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + GD+S + L G PN +T +I
Sbjct: 705 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 741
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 190/398 (47%), Gaps = 58/398 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K I + TF+ LD G L++ L ++ ++V + + G P
Sbjct: 603 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 662
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H ++ L CK D +K G L+++ ++G DP++V YN LI CK G ++ A ++
Sbjct: 663 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 722
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD-------------- 344
+ + ++P+ VTYT+L++G CK G + A L++ M+ G++PD
Sbjct: 723 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 782
Query: 345 --------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
I S+N L+ +CK GKMQE+ LL+ +MG G+ P+ T +
Sbjct: 783 GDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 842
Query: 385 IIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ G + G+L + VEL Q+ S +R +SL +
Sbjct: 843 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHF-----------------SSLFMDMIN 885
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G +P L++ ++++ CK ++ AL+L+D +V ++ S+Y A++ C G+ E
Sbjct: 886 QGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 944
Query: 504 AVSLMDEMLESGMLPDSQICRVLI-----NGYCMEKDV 536
A++L+ EM + G+ P C +L+ +GY E +
Sbjct: 945 ALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNT 982
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 191/423 (45%), Gaps = 20/423 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K G + + + ++ LD G +P+ V LL K + I++ ++ M G+
Sbjct: 568 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 627
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + IL H +G+++ L IE+ G PD+ Y++LIS CK AF +
Sbjct: 628 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 687
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V P++V Y L++GLCK G + A +F+ ++ +GL P+ V+Y +LI CK
Sbjct: 688 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 747
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDI 417
G + + L EM+ GI PD F ++ G G L A+ L+ E+ R SIS
Sbjct: 748 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-- 805
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L+ C+ + LL I G VP+ ++ L + +++ + V
Sbjct: 806 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI---FV 862
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ K S S R SL +M+ G +P + +I +C E +++
Sbjct: 863 ELQQKTSESAARHF-------------SSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLD 908
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L K SY A+ + G LS+ + L K + G P+ C ++
Sbjct: 909 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILL 968
Query: 598 HSL 600
+L
Sbjct: 969 TNL 971
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 166/359 (46%), Gaps = 20/359 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +F+ G P + + L++GL K ++ + + +EM + G+ PN +
Sbjct: 643 GNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCY 702
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L CK+GD+ I +G P+ VTY +LI CK G +++AFYLY M
Sbjct: 703 NALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLA 762
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD Y+ L G G + +A L M RG + I S+N L+ +CK GKMQE
Sbjct: 763 TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQE 821
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISR------- 415
+ LL+ +MG G+ P+ T + I+ G + G+L + VELQ + S +R
Sbjct: 822 TLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM 881
Query: 416 ----------DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
D+ D +I C++ A L + I Y ++++LC+
Sbjct: 882 DMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK 941
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML-ESGMLPDSQIC 523
+++AL L EM R I PS + L+ G E +++D ML + DS+ C
Sbjct: 942 LSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLDNMLCHKWLQKDSKFC 1000
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 40/403 (9%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+ L++G + + +++++M ++ + P+ + +N L K G V++
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 543
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++E G P+ TY+ LI Y K G L A
Sbjct: 544 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA------------------------- 578
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
QL RM+ GL P+ V Y L+ +Y K +++ S M+ G+ D
Sbjct: 579 ----------EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 628
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ G + +A ++ +++ G +Y LI LC+ A +L+
Sbjct: 629 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 688
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P++ YN L++ LCK ++ A + + ++ + + P+ TY +LI C +G
Sbjct: 689 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 748
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG--FFAKKFQIYDTES 557
A L +EML +G+ PD+ + VL G D+ +A L+ F I S
Sbjct: 749 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASI---SS 805
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+N + + F + G + + ++L + G PN LT + +I L
Sbjct: 806 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 266/556 (47%), Gaps = 12/556 (2%)
Query: 48 LYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV 107
+N P Q+ N I++++ +H ++ K ++P + I S
Sbjct: 104 FFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPH 163
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+A N + + + ++ YC ++ N A ++ E++ L CP + F
Sbjct: 164 AARRLLNNMPSQ-GCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGL-GICP-DIMAFN 220
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI + G ++ES + K L G P++ + N + G + +++ ++
Sbjct: 221 KLIH-------TLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL 273
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ +GR G+ P+ T+N L CKN V + +L K+ EG++PD TYN++I YCK
Sbjct: 274 LDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + +A + R + +PD TY +L+NGLC++G + A +F+ + +GL P++V
Sbjct: 333 LGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVL 392
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
NTL+ ++G + ++ L+ EM NG PD +T +++ G K G + A NLV++
Sbjct: 393 CNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI 452
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G ++ LI C+ + A +++R+ G P + YN ++ LCK
Sbjct: 453 AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
D + M+++ P++ TY L FC + EA++L++EM G+ PD L+
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDT-ESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
G+C D++ A L ++++ T +YN + N FA +++ +L + GF
Sbjct: 573 KGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGF 632
Query: 587 APNNLTCKYMIHSLWK 602
+P++ T + MI K
Sbjct: 633 SPDSYTYRVMIDGFCK 648
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 245/555 (44%), Gaps = 53/555 (9%)
Query: 86 LLP-HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
LLP H+ A +++ Q + + AL FN VK + K T Y ++ L ++ +F
Sbjct: 5 LLPKHVAA------VVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEA 58
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTE-DCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
++L E +++ L+ Y + G I+E+ F + +P
Sbjct: 59 MEEVLAET---------RMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEP 109
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK----- 258
S+ S N ++N L++ DQ +VY M GI P+ +TF I FC+
Sbjct: 110 SVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLL 169
Query: 259 ------------------VNGFLE---KIEEE---------GFDPDLVTYNTLISSYCKK 288
+ GF E ++E G PD++ +N LI + C+K
Sbjct: 170 NNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRK 229
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + ++ L + +R V P+L T + G C+ + EA +L V RGL+PD+++Y
Sbjct: 230 GHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITY 288
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NTLI CK K+ E++ L +M+ G PD FT I+ GY K G + +A ++ +
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF 348
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G Y LI LCQD A ++ + G P+L + N L++ L + +
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL L +EM + P + TY +I C IG +A +L+ + + G LPD LI+
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GYC + ++ A ++ D +YN++ N + G +M K + G P
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVP 528
Query: 589 NNLTCKYMIHSLWKG 603
N +T + S K
Sbjct: 529 NIITYNILTESFCKA 543
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 182/342 (53%), Gaps = 11/342 (3%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I + F + ++ G +P++V CN L+ GL + I Q ++ EM G P+ T+
Sbjct: 369 GDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTY 428
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ + CK G V + + +G PD+ T+NTLI YCKK +L++A + M+
Sbjct: 429 NLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWN 488
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V PD++TY +++NGLCK GK + F M+ +G P+I++YN L ++CK K++E
Sbjct: 489 HGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEE 548
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL---VVELQRFGVSISRDIYDY 420
+ +L+ EM G+ PD +++G+ G L A L V E +F +I+ Y+
Sbjct: 549 ALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIA--TYNI 606
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA---LLLKDEMV 477
+I A A L ++ ++G+ P Y +++ CK ++ LL+K +
Sbjct: 607 MINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVK---I 663
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
++ + PSL+T+ ++ C C R EAV ++ M+ G++P+
Sbjct: 664 EKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE 705
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 3/380 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ RK ++ G++P + N +++G KL + Q+ + G P+ T+
Sbjct: 301 VVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCS 360
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + C++GD+D+ + E+G P+LV NTL+ ++G + A L M
Sbjct: 361 LINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENG 420
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+ TY ++NGLCK G V +A L + +G PD+ ++NTLI YCK+ K+ +
Sbjct: 421 CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAI 480
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
++ M +G+ PD T I+ G K G+ + + G + Y+ L +
Sbjct: 481 EIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESF 540
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS- 484
C+ + A +L+E + G P + + LM+ C + A L + VD K S
Sbjct: 541 CKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLF-KRVDEQYKFSH 599
Query: 485 -LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++TY +I F G A L ++M E+G PDS RV+I+G+C ++N + L
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 544 GFFAKKFQIYDTESYNAVFN 563
+K I ++ V N
Sbjct: 660 LVKIEKGLIPSLTTFGRVLN 679
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 187/385 (48%), Gaps = 3/385 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+G+++ + + R GF P + L+NGL + ID+ V+ E G+ P
Sbjct: 329 GYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKP 388
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N N L + G + + + ++ E G PD+ TYN +I+ CK G ++DA L
Sbjct: 389 NLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLV 448
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LPD+ T+ TL++G CK+ K+ A ++ RM + G+SPD+++YN+++ CK
Sbjct: 449 IDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKA 508
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK ++ MM G P+ T I+ + + K ++ ALNL+ E+Q G++ +
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568
Query: 419 DYLIVALCQDNRPFAATSLLERIG-QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ C + A L +R+ Q + ++ YN ++ + ++ A L ++M
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P TYR +I FC G S + +E G++P ++N C+++ V+
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688
Query: 538 KAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ K + E N +F
Sbjct: 689 EAVGIIHLMVHKGIV--PEVVNTIF 711
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 38/213 (17%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + TF+ ++ G P+I++ N L K +++ + EEM G+ P+
Sbjct: 507 KAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVV 566
Query: 242 TFNILTHVFCKNGDVDK------------------------VNGFLEKIE---------- 267
F L FC NGD+D +N F K+
Sbjct: 567 NFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNK 626
Query: 268 --EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
E GF PD TY +I +CK G +N + + + ++P L T+ ++N LC + +
Sbjct: 627 MCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRR 686
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
V EA + H MVH+G+ P++V NT+ A KE
Sbjct: 687 VHEAVGIIHLMVHKGIVPEVV--NTIFEADKKE 717
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 250/526 (47%), Gaps = 27/526 (5%)
Query: 10 SFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPN-KIVDLICSS 68
S +N + FSSF+ S S + ++ + + + P+ P +NP K DL +
Sbjct: 5 SIGVNRRLRYQFSSFAGYSGSENPRLFKTL--GAANTPI----PHRRNPEPKGQDLDFVN 58
Query: 69 LKKGDSHLTLLQND---LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPT 125
+ +H L+Q+D L L HL + + VLL+ Q D + +L FFNW K +
Sbjct: 59 V----AHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHS 114
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCE-LVELVKDCPHSVDVFQDLISCTEDCNWA----- 179
+ +++H L N KF A +L + LV D P VF L+ +C+
Sbjct: 115 LETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP--AKVFDALLYSYRECDSTPRVFD 172
Query: 180 -----YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+ + R + TF + D GF P++ SCN ++ LL +D + Y EM R
Sbjct: 173 SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRC 232
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
I PN +T N++ +C++G +DK L+ +E GF V+YNTLI+ +C+KG L+ A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L +M + + P++VT+ TL++G C+ K++EA ++F M ++P+ V+YNTLI
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
Y ++G + + +M+ NGI D T ++ G K+ + A V EL + + +
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ LI+ C L + + + G P+ + +N L+ + C+ + A +
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
EMV R+I T + G+ L+ EM L +S
Sbjct: 473 EMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 5/327 (1%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++++ GF P + + N +SS +GR++ A YR M R + P+ T +M+G C+ G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ + +L M G VSYNTLI +C++G + + L M +G+ P+ T
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ + +L A + E++ V+ + Y+ LI Q A E + +
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + YN L+ LCK A E+ N+ P+ ST+ ALI C +
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M+ SG P+ Q +L++ +C +D + A +L ++ D+ + + V N
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 565 FAEDGD---LSKLMELQ--KRFLRLGF 586
G + KL++ K+FL+ F
Sbjct: 493 LKHQGKDQLVKKLLQEMEGKKFLQESF 519
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 125/288 (43%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ +L K R A F +M G P + S N + + +G++ + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I P+ +T +++ GY + G+L + L+ +++R G + Y+ LI C+
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+A L +G+ G P++ +N L+ C+ + +A + EM N+ P+ TY LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ G A ++M+ +G+ D LI G C + KA + K+ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ +++A+ + + EL K +R G PN T ++ +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 161/391 (41%), Gaps = 25/391 (6%)
Query: 238 PNTH---TFNILTHVFCKNGDVDKVNGFLEKIEEEG--------FDPDLVTY-------- 278
P +H T I+ H KN L + G FD L +Y
Sbjct: 110 PGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR 169
Query: 279 --NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++L ++ + +A + M LP + + M+ L +G+V A + + M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+SP+ + N ++ YC+ GK+ + LL +M G + ++ G+ ++G L
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
SAL L + + G+ + ++ LI C+ + A+ + + P+ YN L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ + A ++MV I+ + TY ALI C ++ +A + E+ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+P+S LI G C+ K+ ++ L + + +++N + + F + D +
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + +R ++ T +H + G++ +
Sbjct: 470 VLREMVRRSIPLDSRT----VHQVCNGLKHQ 496
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++E+ K F + V P+ V+ N L+NG + + ++ YE+M GI + T+N
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK K F++++++E P+ T++ LI C + + F LY+ M R
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P+ T+ L++ C+ A Q+ MV R + D + + + +GK Q K
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 366 SLLYEMMGNGIYPDTF 381
LL EM G ++F
Sbjct: 504 KLLQEMEGKKFLQESF 519
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 208/406 (51%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I+E+ + F + + G +P+++S ++NGL K V+++M + G PN T+
Sbjct: 177 GKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY 236
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + CK+ V+ FL ++ E G P++ TYN+++ +C G+LN+A L++ M
Sbjct: 237 STIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG 296
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R+V+P+ VT+T L++GLCKEG V EA +F M +G+ PDI +YN L+ YC + M E
Sbjct: 297 RDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNE 356
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G P + I++ GY K R+ A +L+ E+ ++ Y L+
Sbjct: 357 AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 416
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LCQ RP A +L + + G P+L Y L++ CK + +AL L M ++ ++P
Sbjct: 417 GLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP 476
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y LI G+ A L ++ G PD + V+I G E ++A L
Sbjct: 477 NIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLF 536
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++ SYN + F ++ D S + L + F+ N
Sbjct: 537 RKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVN 582
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 235/505 (46%), Gaps = 15/505 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C D+++ +F+ V+ + +P+ + + A ++S + LC ++L + H
Sbjct: 73 CVDDALA--SFYRMVR--INPRPSVVEFGKFLGSFAKKKQYSTVVS-LCNQMDLFR-VTH 126
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V LI+C N V ++ + FK +G P ++ N L+NGL I
Sbjct: 127 NVYSLNILINCLCRLNHVDFSVSVLGKMFK-------LGIHPDAITFNALINGLCNEGKI 179
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ +++ EM + G PN ++ + + CK G+ +K+E+ G P++VTY+T+
Sbjct: 180 KEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTI 239
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I S CK +NDA M R + P++ TY ++++G C G++ EA +LF MV R +
Sbjct: 240 IDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDV 299
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P+ V++ L+ CKEG + E++ + M G+ PD T ++ GY + RL++
Sbjct: 300 MPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQ-RLMNEAK 358
Query: 402 LVVELQ-RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
V E+ R G + Y+ LI C+ R A SLL + P Y+ LM+ L
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C+ +AL L EM P+L TY L+ FC G EA+ L+ M E + P+
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+LI G + + A+ L D +Y + ++G + +L ++
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGME 605
GF PN+ + MI + +
Sbjct: 539 MEDDGFLPNSCSYNVMIQGFLQNQD 563
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 204/381 (53%), Gaps = 8/381 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K R D +P++V N +++GL K +++ + +Y EM GI P+
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + FC G + L+++ + +P + YN LI++ CK+G + +A L +M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P +VTY+TLM+G C G+V+ A Q+FH MV G++P++ SYN +I CK ++
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +LL EM+ + PDT T ++ G K GR+ SALNL+ E+ G Y L
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC++ AT+L ++ + G P++ Y L++ LCK + +A L ++ +
Sbjct: 367 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 426
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAE 540
+ TY +I C G EA+++ +M ++G +P++ ++I EKD N KAE
Sbjct: 427 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL-FEKDENDKAE 485
Query: 541 ALL------GFFAKKFQIYDT 555
LL G F++ D
Sbjct: 486 KLLHEMIAKGLLVLDFKVADV 506
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 205/412 (49%), Gaps = 1/412 (0%)
Query: 192 TFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ K ++V G + + V+ N L+N L + + V ++ ++G P+T T N L
Sbjct: 31 SLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGL 90
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C G+V K F +K+ +GF D V+Y TL++ CK G A L R++ R+ P++
Sbjct: 91 CLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNV 150
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
V Y T+++GLCK+ V EA+ L+ M RG+ PD ++Y TLI+ +C G++ + SLL E
Sbjct: 151 VMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDE 210
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ I P + I++ KEG + A NL+ + + G+ Y L+ C
Sbjct: 211 MILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGE 270
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A + + Q G P++ YN ++ LCKC V +A+ L EM+ +N+ P TY +
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C GR A++LM+EM G D L++ C ++++KA AL ++
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+Y A+ + + G L EL + L G + T MI L K
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 442
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 204/423 (48%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G + SF K L +G+QP ++ N L+ GL + + ++++ G +
Sbjct: 55 FCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMD 114
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G+ L IE+ P++V YNT+I CK +N+A+ LY
Sbjct: 115 HVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS 174
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + PD +TYTTL+ G C G++ A L M+ + ++P + YN LI A CKEG
Sbjct: 175 EMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEG 234
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++E+K+LL M GI P T ++ GY G + +A + + + GV+ + Y+
Sbjct: 235 NVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYN 294
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ R A +LL + VP YN L++ LCK + AL L +EM R
Sbjct: 295 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 354
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +L+ C +A +L +M E G+ P LI+G C + A
Sbjct: 355 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 414
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L K D +Y + + ++G + + ++ + G PN +T + +I S
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474
Query: 600 LWK 602
L++
Sbjct: 475 LFE 477
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 197/405 (48%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
V P I+ N +L L K+ + ++M GI N T NIL + FC G +
Sbjct: 4 VRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAF 63
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L KI + G+ PD +T NTL+ C KG + + + + + + D V+Y TL+N
Sbjct: 64 SFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLN 123
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK G+ R A +L + R P++V YNT+I CK+ + E+ L EM GI+P
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ G+ G+L+ A +L+ E+ ++ IY+ LI ALC++ A +LL
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ ++G P + Y+ LM+ C V +A + MV + P++ +Y +I C
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R EA++L+ EML M+PD+ LI+G C + A L+ + Q D +Y
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 363
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ + ++ +L K L + G P T +I L KG
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 157/317 (49%), Gaps = 1/317 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+F D I+ T + + +G + +F + + P + N L+N L K + +
Sbjct: 181 IFPDAITYTT-LIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEA 239
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ M + GI P T++ L +C G+V + + G +P++ +YN +I+
Sbjct: 240 KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK R+++A L R M +N++PD VTY +L++GLCK G++ A L + M HRG D
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+Y +L+ A CK + ++ +L +M GI P +T ++ G K GRL +A L
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
L G I Y +I LC++ A ++ ++ +G +P+ + ++ SL + D
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479
Query: 465 SVADALLLKDEMVDRNI 481
A L EM+ + +
Sbjct: 480 ENDKAEKLLHEMIAKGL 496
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 231/517 (44%), Gaps = 46/517 (8%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P S YC+++ L + AM++L E+ K V V+ LIS +
Sbjct: 42 EPNSFTYCILMDGLCKEGRVEEAMRLLGEMKR--KGLEVDVVVYSTLIS-------GFCS 92
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + F + L+ G P++V + L+NG K + V M GI P+ +T
Sbjct: 93 KGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYT 152
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ + CK+G K + + E+G +P VTYN LI+ CK+G + DAF ++ M
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNTLIFAYCKEGK 360
+ ++V+Y TL+ GLC GK+ EA +LF ++ G + PD++++NT+I CKEG+
Sbjct: 213 EKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGR 272
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ + M+ G + + FTC I++ Y K G + A+ L + + G+ S Y
Sbjct: 273 LDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSV 332
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I C+ + A L R+ G P+L YN LM SLCK S+ A L EM + N
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392
Query: 481 -----------------------------------IKPSLSTYRALICCFCGIGRSGEAV 505
+ P TY + I +G+ EA
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
D M+ SG+ PD+ + LI G+ + ++ + LL A I D E N++
Sbjct: 453 GAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +MEL F +++C ++ + K
Sbjct: 513 CNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQK 549
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 202/427 (47%), Gaps = 12/427 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + + G + +V + L++G C+D+ +++EM GI PN
Sbjct: 57 KEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVV 116
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ L + FCK G + L + E G PD+ TY +I CK GR A L+ +M
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P VTY L+NGLCKEG + +A ++F M+ +G ++VSYNTLI C GK+
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236
Query: 362 QESKSLLYEMM--GNGIYPDTFTCQIIVQGYGKEGRLLSALNL---VVELQRFGVSISRD 416
E+ L ++ GN + PD T ++QG KEGRL A+ + ++E FG +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
I LI + A L +R+ + G VPS Y+ +++ CK + A L M
Sbjct: 297 I---LIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM 353
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P+L Y L+ C +A L EM ES PD+ ++I+G D+
Sbjct: 354 KISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDI 413
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ A+ LL + D +Y++ N ++ G + + + G P+N ++
Sbjct: 414 HSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDN----HV 469
Query: 597 IHSLWKG 603
SL KG
Sbjct: 470 YDSLIKG 476
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 170/334 (50%), Gaps = 6/334 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+V+YNT+I+ CK+ RL A L M + P+ TY LM+GLCKEG+V EA +L
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +GL D+V Y+TLI +C +G + K+L EM+ GI P+ ++ G+ K
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+G A ++ + G I D+Y Y +I LC+D R A L + + + G PS
Sbjct: 128 KGLWREATAVLHTMTERG--IQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ LCK + DA + + M+++ + + +Y LI C G+ EA+ L
Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSS 245
Query: 511 MLESG--MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+LE G + PD +I G C E ++KA + ++ + + + + + +
Sbjct: 246 LLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKS 305
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + K MEL KR +LG P++ T MI K
Sbjct: 306 GIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCK 339
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 196/403 (48%), Gaps = 2/403 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P IVS N ++NGL K +++ + EM PN+ T+ IL CK G V++
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L +++ +G + D+V Y+TLIS +C KG L+ L+ M + + P++V Y+ L+NG CK
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G REA + H M RG+ PD+ +Y +I CK+G+ +++ L M G P T T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ G KEG + A + + G + Y+ LI+ LC + + A L +
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247
Query: 443 QDG-YV-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+DG YV P + +N +++ LCK + A+ + D M++R +L T LI + G
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A+ L + + G++P S V+I+G+C +N A+ L YN
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNT 367
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ ++ L + L + P+ ++ MI K
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 246/492 (50%), Gaps = 13/492 (2%)
Query: 120 LEIKPTSS----NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
L ++PT S N L + A NN ++ A+ + +L EL P ++ F L++C
Sbjct: 49 LRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQL-ELKGITP-TIVTFNILVNC--- 103
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
Y +G + +F F K L +G+ P+ ++ N L+NG+ + + ++ + +G
Sbjct: 104 ----YCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ ++ L + CK G+ L+KIE + + D+V YN +I+S CK ++DA+
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
LY M + + PD+VT+ +L+ G C G+++EA LFH MV + ++PD+ +++ L+ A
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK+G + +K++L MM G+ PD T ++ GY + A ++ + R GV+
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHA 339
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ +I L + A SL + + G P YN L++ LCK ++ A L DE
Sbjct: 340 HSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE 399
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + I + TY +LI C +A++L+ ++ + G+ P +LI+G C
Sbjct: 400 MHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGR 459
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ A+ + K + +YN + N ++G ++ L + G P+ +T +
Sbjct: 460 LKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYET 519
Query: 596 MIHSLWKGMERK 607
+I +L++ E +
Sbjct: 520 IIRALFRKDENE 531
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 183/362 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + + +K +V N ++N L K + +Q+Y EM I P+
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L FC G + + G ++ + +PD+ T++ L+ + CK G + A + +M
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ V+PD+VTY++LM+G C +V +A +F M G++P SYN +I K +
Sbjct: 296 MKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMV 355
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ SL EM GI PDT T ++ G K GR+ A LV E+ G+ Y+ L
Sbjct: 356 DEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSL 415
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+++ A +L+++I G PS+ YN L++ LCK + +A + +++ +
Sbjct: 416 IDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGY 475
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY +I C G EA L+ +M +G++PD+ +I + + KAE
Sbjct: 476 SVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEK 535
Query: 542 LL 543
LL
Sbjct: 536 LL 537
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 37/307 (12%)
Query: 333 FHRMVHRGLSPDIVS-------------------------------------YNTLIFAY 355
FHRM+ +P IV +N L+ Y
Sbjct: 45 FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C G+M + S+ +++ G +P T T ++ G G+L AL+ + G + +
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI LC+ AA +L++I + +YN ++ SLCK +V+DA L E
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ + I P + T+ +LI FC +G+ EA L EM+ + PD +L++ C + +
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ +A+ +L K+ I D +Y+++ + + +++K + RLG AP+ +
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344
Query: 596 MIHSLWK 602
MI+ L K
Sbjct: 345 MINGLGK 351
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 204/426 (47%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+++ G + + K ++ L G + VS L+NG K +++ + E+ G
Sbjct: 201 QGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFS 260
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ TFN L + FC+ G+V+ ++ + E+GFDPD+ TYN+LIS CK G A +
Sbjct: 261 PDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEI 320
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M R P+ VTY TL++ LCKE ++ A L +V +GL PD+ ++NTLI C
Sbjct: 321 LQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCL 380
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ + EM G PD FT I++ E RL AL L+ E++ G + + +
Sbjct: 381 SKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVV 440
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI LC+ R A + +++ G S YN L++ LCK V +A L D+M+
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+KP TY +L+ FC +G +A ++ M +G PD LI G C V+
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A LL K + +YN V + M L + + P+ LT K +
Sbjct: 561 VASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVF 620
Query: 598 HSLWKG 603
L G
Sbjct: 621 RGLCNG 626
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 192/395 (48%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
++GF+P N LN L++ N + ++ +M GI + TFN+L CK +
Sbjct: 116 ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
LE++ G PD +T+ TL+ + ++G LN A + + M L V+ L+
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
NG CKEG+V EA + + G SPD V++N+L+ +C+ G + ++ ++ M+ G
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD +T ++ G K G A+ ++ ++ S + Y+ LI ALC++N AAT L
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G +P + +N L++ LC + A+ + +EM ++ KP TY LI C
Sbjct: 356 ARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCY 415
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
R EA+ L+ EM SG ++ + LI+G C + + AE + + +
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
YN + + ++ + + +L + + G P+ T
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFT 510
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 190/411 (46%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + E+ + + + GF P V+ N L+NG ++ ++ + + M G P
Sbjct: 237 GFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP 296
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+N L CK G+ +K L+++ P+ VTYNTLIS+ CK+ + A L
Sbjct: 297 DVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLA 356
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
RI+ + +LPD+ T+ TL+ GLC A ++F M ++G PD +Y+ LI + C E
Sbjct: 357 RILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYE 416
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++E+ LL EM +G + ++ G K R+ A + +++ GVS S Y
Sbjct: 417 RRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTY 476
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC++ R A+ L++++ +G P YN L+ C+ + A + M
Sbjct: 477 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+P + TY LI C GR A L+ + G++ +I M K +
Sbjct: 537 NGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKE 596
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAP 588
L +K D ++ VF G + + ++ L G P
Sbjct: 597 GMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP 647
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 183/377 (48%), Gaps = 1/377 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G ++ + ++ + P+ V+ N L++ L K N I+ + + G+ P+
Sbjct: 310 KLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVC 369
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + + D E+++ +G PD TY+ LI S C + RL +A L + M
Sbjct: 370 TFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM 429
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V Y TL++GLCK ++ +A ++F +M G+S V+YNTLI CK ++
Sbjct: 430 ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRV 489
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ L+ +M+ G+ PD FT ++ + + G + A ++V + G Y L
Sbjct: 490 EEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTL 549
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A+ LL + G V + YN ++++L + + L EM++++
Sbjct: 550 IGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSD 609
Query: 482 KPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P T++ + C G G EA+ EMLE G+LP+ L G C +
Sbjct: 610 PPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLI 669
Query: 541 ALLGFFAKKFQIYDTES 557
L+ +K Q+ + E+
Sbjct: 670 ELINMVMEKAQMSERET 686
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 177/392 (45%), Gaps = 2/392 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
LL L + + D + +++ G PN TF L F +++ + LE E G
Sbjct: 61 LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELG 118
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F PD YN +++ + +L L+ M ++ D+ T+ L+ LCK ++R A
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ M + GL PD +++ TL+ + +EG + + + +M+G G + +++V G+
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGF 238
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
KEGR+ AL V+E+ G S + ++ L+ C+ A +++ + + G+ P +
Sbjct: 239 CKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ +CK A+ + +M+ R P+ TY LI C A L
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARI 358
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
++ G+LPD LI G C+ K+ + A + K D +Y+ + + +
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + + L K G A N + +I L K
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCK 450
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 132/291 (45%), Gaps = 2/291 (0%)
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
TL+ L + L ++ G P+ ++ TLI ++ +++ +L +G
Sbjct: 60 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELG- 118
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
PDT I + ++ +L L ++ G+ + ++ LI ALC+ ++ A
Sbjct: 119 -FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+LE + G P + LM+ + + AL +K +M+ + + + L+
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
FC GR EA+ + E+ E G PD L+NG+C +VN A ++ F +K D
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YN++ + + G+ K +E+ ++ + +PN +T +I +L K E
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 260/597 (43%), Gaps = 54/597 (9%)
Query: 55 TQNPNKIVDLICSSLKK--GDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA--- 109
+P+ + + + L + GD + +D+ L +S +L RC S
Sbjct: 45 AADPDGVAAEVATLLSRCTGDWKQVIAASDIPS---RLSPAALSSLLRRCNSSPRLHPKL 101
Query: 110 -LTFFNWVKNDLEIK-PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
L FF W + L P + + L + A +L +++ P +
Sbjct: 102 LLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLVLSSVH 161
Query: 168 DLISCTEDCNW---------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
+S ++ Y K G +R+ + D+G PS+ CN LL LL+
Sbjct: 162 RALSGSDQGRRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRA 221
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ +D W+V M GI P+ +T++ L +CK D++ +E++ E G ++VTY
Sbjct: 222 DALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTY 281
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NTLI C+ G + +AF + M ++PD TY ++NGLCK G+ +A L M
Sbjct: 282 NTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSC 341
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
GL P++V Y+TLI + ++G E+ ++ EM G+ P+ T +++G K GR+
Sbjct: 342 AGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGR 401
Query: 399 A------------------LNLVVE-----------------LQRFGVSISRDIYDYLIV 423
A NLV+E +++ G+S + Y +I
Sbjct: 402 ASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIIN 461
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LCQ A+ LLE++ DG P+ +Y L+ C+ S + A +M N+ P
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L Y +LI +G+ EA+ DEMLE G P+ LI+GY M ++ KAE LL
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ Y + + + +L K+ K L G P+N +IH+L
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNL 638
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 205/406 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + + ++ +G+ ++ N ++ G L+ + ++ + + EM + GI PN +
Sbjct: 395 KLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVY 454
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++I+ + C+ G+ ++ +G LE++ +G P+ Y LIS YC++G + A + M
Sbjct: 455 TYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R N+ PDL Y +L+ GL GK+ EA + + M+ +G P+ +Y LI Y G +
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNL 574
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++++ LL++M+ +G+ P+ F I++GY K L + + + G+ +Y +
Sbjct: 575 EKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIV 634
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I L AA S+L I ++G VP IY L+ CK + A+ L DEM + I
Sbjct: 635 IHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGI 694
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P +S Y ALI FC A ++ + ++ G+ P+ LI+GYC D+ A
Sbjct: 695 EPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAID 754
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
L + D Y+ + + GDL + + + + + G+A
Sbjct: 755 LYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA 800
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 207/427 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY KV + + K + + G ++V+ N L+ GL + I++ + +EM G+ P
Sbjct: 252 AYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVP 311
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ + + CK G D+ L+++ G P++V Y+TLI + ++G ++AF +
Sbjct: 312 DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIV 371
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M V P+ +TY L+ GLCK G++ A ++ +M G D ++YN +I + ++
Sbjct: 372 KEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQ 431
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+E+ LL EM GI P+ +T II+ G + G A L+ ++ G+ + +Y
Sbjct: 432 HNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ A L+++ ++ P L YN L+ L + +A+ DEM++
Sbjct: 492 APLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE 551
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +P+ TY LI + G +A L+ +ML SG+ P+ I ++ GY ++ K
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEK 611
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ L +K + D Y V + + G + + + + G P++L +I
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLIS 671
Query: 599 SLWKGME 605
K +
Sbjct: 672 GFCKAAD 678
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 191/404 (47%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G P++V + L++G ++ D+ +++ +EM G+ PN T++ L CK G + +
Sbjct: 342 AGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGR 401
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ L+++ + G+ D +TYN +I + ++ +AF L M + + P++ TY+ ++N
Sbjct: 402 ASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIIN 461
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLC+ G+ A L +M+ GL P+ Y LI YC+EG + L +M + P
Sbjct: 462 GLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D + ++ G G++ A+ E+ G + Y LI A LL
Sbjct: 522 DLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLL 581
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ G P+ IY +++E K D++ M+++ + P Y +I
Sbjct: 582 HQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSS 641
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G AVS++ + ++G++PDS I LI+G+C D+ KA LL AKK Y
Sbjct: 642 GHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
NA+ + F + D+S + + G PN +T +I K
Sbjct: 702 NALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCK 745
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 163/361 (45%), Gaps = 17/361 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + ++ + + L+ G P+ +L G K + +++ + M G+ P
Sbjct: 567 GYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMP 626
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + I+ H +G + L IE+ G PD + Y +LIS +CK + A L
Sbjct: 627 DNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLL 686
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P + Y L++G CK + A +F+ ++ +GL P+ V+Y TLI YCK
Sbjct: 687 DEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKA 746
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++++ L EM+ G+ PD F ++ G G L AL + E+ G +I +
Sbjct: 747 GDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISS-F 805
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ C+ + L + VPSL ++ L + +++A + E+
Sbjct: 806 NTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQ 865
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+N +++R + SL +M+ G++P + +I +C + ++K
Sbjct: 866 KN-----ASHR----------DTDHLSSLFTDMINQGLVP-LDVIHNMIQSHCKQGYLDK 909
Query: 539 A 539
A
Sbjct: 910 A 910
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 187/449 (41%), Gaps = 11/449 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +I++ L + A +L +++ + V+ LIS Y
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMI--ADGLKPNAFVYAPLIS-------GYC 499
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + +T +K P + N L+ GL + +D+ + Y+EM G PN
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L H + G+++K L ++ G +P+ Y ++ Y K L + M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++PD Y +++ L G ++ A + + GL PD + Y +LI +CK M
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ LL EM GI P ++ G+ K + A N+ + G+ + Y L
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ A L + +G P +Y+ L + AL + +EM+ R
Sbjct: 740 IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY 799
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+S++ L+ FC G+ E V + M++ ++P ++ G +++A
Sbjct: 800 A-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHT 858
Query: 542 LLGFFAKKFQIY-DTESYNAVFNMFAEDG 569
+ +K + DT+ +++F G
Sbjct: 859 IFVELQQKNASHRDTDHLSSLFTDMINQG 887
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 195/362 (53%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I +SF + + GF P++V L++G K I++ ++ EMG++G+ N
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L + KNG + EK++E+G P+L TYN +++ CK GR DAF ++ M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V ++VTY TL+ GLC+E K+ EA+++ +M G++P++++YNTLI +C GK+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ SL ++ G+ P T I+V G+ ++G A +V E++ G+ S+ Y L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + + A L + + G VP + Y+ L+ C + +A L MV++N
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ Y +I +C G S A+ L+ EM E + P+ R +I C E+ +AE
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 542 LL 543
L+
Sbjct: 535 LV 536
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 211/446 (47%), Gaps = 36/446 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+YV+ + S F + +D GF P N+LL ++ + +Q W + E + +
Sbjct: 103 SYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVL 161
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA---- 294
+ ++F IL C+ G+++K L ++ E GF P++V Y TLI CKKG + A
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 295 -------------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F +Y M V P+L TY +MN LCK+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ ++A Q+F M RG+S +IV+YNTLI C+E K+ E+ ++ +M +GI P+ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ G+L AL+L +L+ G+S S Y+ L+ C+ A +++ + +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PS Y L+++ + D++ A+ L+ M + + P + TY LI FC G+ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L M+E P+ I +I GYC E +A LL +K + SY +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++ + L ++ + G P+
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 130/357 (36%), Gaps = 104/357 (29%)
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYP----------------------------- 378
Y +I +Y + + S S EM+ NG P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 379 -----DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
D ++ I+++G + G + + +L++EL FG S + IY LI C+
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 434 ATSLL-----------------------------------ERIGQDGYVPSLEIYNELME 458
A L E++ +DG P+L YN +M
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 459 SLCKCDSVADALLLKDEMVDR-----------------------------------NIKP 483
LCK DA + DEM +R I P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L TY LI FCG+G+ G+A+SL ++ G+ P +L++G+C + D + A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ +Y + + FA ++ K ++L+ LG P+ T +IH
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+Y+ +I + Q + S + +G+VP +N L+ + S +E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + + ++ LI C G ++ L+ E+ E G P+ I LI+G C + ++
Sbjct: 156 KSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
KA+ L K + + +Y + N ++G + E+ ++ G PN T +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 597 IHSLWK 602
++ L K
Sbjct: 275 MNQLCK 280
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 209/424 (49%), Gaps = 8/424 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+VG+ E+ +T GF P I+SCNFL+N L++ ID +Y + R+G+ P
Sbjct: 166 AYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNP 225
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+ I C+ G+ ++ ++EE G +P+ VT +T I C R + +
Sbjct: 226 NDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEAL 285
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + N D YT ++ G C E K++EA +F MV+ G++PD Y LI AYCK
Sbjct: 286 RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKA 345
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ +L +M+ NGI + I+Q + G ++ E + G+ + +Y
Sbjct: 346 GNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLY 405
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI--YNELMESLCKCDSVADALLLKDEM 476
+ ++ ALC+ + A LL + G SL++ Y L+ C + DA + +EM
Sbjct: 406 NIVVDALCKLGKVEEAVELLNEM--KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEM 463
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+R I+P + TY L+ F G EA+ L+D + G+ P+S +I G CM V
Sbjct: 464 KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKV 523
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+AEA L K E+Y+A+ + + + K EL R + G +C +
Sbjct: 524 KEAEAFLNTLEDKC----LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKL 579
Query: 597 IHSL 600
+ SL
Sbjct: 580 LSSL 583
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 199/428 (46%), Gaps = 36/428 (8%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWAYVKVGLI 186
Y ++V L K A+++L E+ K S+DV + LI+ Y G +
Sbjct: 405 YNIVVDALCKLGKVEEAVELLNEM----KGRRMSLDVVHYTTLIA-------GYCLQGKL 453
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
++ F + + G +P IV+ N L+ G + + ++ + +G G+ PN+ T N +
Sbjct: 454 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 513
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C G V + FL +E D L Y+ ++ YCK A+ L+ + ++ +
Sbjct: 514 IEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGI 569
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
L + L++ LC EG+ +A L RM+ + P+ + Y LI A+C++G M+ ++
Sbjct: 570 LVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 629
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV--- 423
+ ++ GI PD T +++ GY + L A ++ +++ G I D+ Y +V
Sbjct: 630 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERG--IKPDVITYTVVLDG 687
Query: 424 --------------ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+ + A+ + + G P + Y L++S CK +++ DA
Sbjct: 688 HSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDA 747
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ L DEM+ R ++P + TY AL+ C G A++L++EM G+ PDS+ VL G
Sbjct: 748 INLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRG 807
Query: 530 YCMEKDVN 537
+ V
Sbjct: 808 ILKARKVQ 815
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 222/515 (43%), Gaps = 35/515 (6%)
Query: 77 TLLQNDLKPLLPHLGAHE--ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVH 134
L Q + +PH+ + ++R++ + D A+ + +K L + P Y + +
Sbjct: 179 ALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDM--AVAIYRHLKR-LGLNPNDYTYGIFIK 235
Query: 135 ILAWNNKFSFAMKMLCELVELVKD-------------CPHS-VDVFQDLISCTEDCNW-- 178
L F A+ + E+ E + C H D+ + + NW
Sbjct: 236 ALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI 295
Query: 179 ---AYVKV--GL-----IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
AY V G ++E+ F ++ G P L++ K + Q ++
Sbjct: 296 DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALH 355
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M GI N + + C+ G +V ++ + G D V YN ++ + CK
Sbjct: 356 NDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKL 415
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G++ +A L M R + D+V YTTL+ G C +GK+ +A +F M RG+ PDIV+Y
Sbjct: 416 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 475
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N L+ + + G +E+ LL + G+ P++ T I++G G++ A + L+
Sbjct: 476 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE- 534
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ Y ++ C+ N A L R+ + G + + +L+ SLC
Sbjct: 535 ---DKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDK 591
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL+L + M+ +++P+ Y LI FC G A + D ++E G+ PD ++IN
Sbjct: 592 ALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMIN 651
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
GYC + +A + ++ D +Y V +
Sbjct: 652 GYCRVNCLREARDIFNDMKERGIKPDVITYTVVLD 686
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 202/477 (42%), Gaps = 46/477 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G + ++ + G + + V + +L L ++ + ++E GI
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFL 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +NI+ CK G V++ L +++ D+V Y TLI+ YC +G+L DA ++
Sbjct: 401 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + PD+VTY L+ G + G +EA +L + +GL P+ ++N +I C
Sbjct: 461 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMA 520
Query: 359 GKMQESKSLL----------YEMMGNGIYPDTFT---------------------CQIIV 387
GK++E+++ L Y M +G FT C ++
Sbjct: 521 GKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLL 580
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
EG AL L+ + V ++ +Y LI A C+D A + + + + G
Sbjct: 581 SSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGIT 640
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI----GRS-- 501
P + Y ++ C+ + + +A + ++M +R IKP + TY ++ + RS
Sbjct: 641 PDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQ 700
Query: 502 ---GEAVSLMD------EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G MD EM E G+ PD VLI+ +C ++ A L +
Sbjct: 701 FSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQ 760
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
D +Y A+ + GD+ + + L G P++ + + K + +F+
Sbjct: 761 PDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQFR 817
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 156/394 (39%), Gaps = 26/394 (6%)
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-----GFDPD----- 274
W + ++ G N T+ L V C+ K+ L +I GFD
Sbjct: 81 WSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFDV 140
Query: 275 ----------------LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ + L+ +Y + G ++A RR +P +++ LMN
Sbjct: 141 LREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMN 200
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
L + GK+ A ++ + GL+P+ +Y I A C++G +E+ + EM G+ P
Sbjct: 201 RLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNP 260
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ TC ++G R + L+ I Y +I C + + A +
Sbjct: 261 NAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVF 320
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ +G P IY L+ + CK ++ A+ L ++MV IK + +++ C C +
Sbjct: 321 IDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEM 380
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G + E V E +SG+ D + ++++ C V +A LL + D Y
Sbjct: 381 GMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHY 440
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ + G L + + G P+ +T
Sbjct: 441 TTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVT 474
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 29/285 (10%)
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN---------GIYPD 379
A F ++ G ++ +Y LI C+ ++ +SLL E++G+ D
Sbjct: 80 AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
L+ L+++V+ + ++D I AL Q R
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVK-----AYVRVGMFDEAIDALFQTKRR-------- 186
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
G+VP + N LM L + + A+ + + + P+ TY I C G
Sbjct: 187 -----GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKG 241
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESY 558
EAV + EM E+G+ P++ C I G C K + EAL A + I DT +Y
Sbjct: 242 NFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI-DTFAY 300
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
AV F + L + ++ + G AP+ +IH+ K
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKA 345
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 234/481 (48%), Gaps = 16/481 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++ L+ ++ A+K+L E+ + CP V+ F +I + + ++
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEM--FLMGCPPDVNTFNTVI-------YGFCRL 293
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E K + + GF P+ ++ +L++GL K ID+ + ++ PN F
Sbjct: 294 NRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVHF 349
Query: 244 NILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + F +NG +++ F+ +K+ G+ PD+ T++TL++ CKKG A L M
Sbjct: 350 NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMD 409
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P+L TYT L++G CK+G++ EA + M+ +G S + V YN LI A CK GK+
Sbjct: 410 AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIH 469
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ + EM G PD FT ++ G + + AL L ++ GV + ++ LI
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEI-YNELMESLCKCDSVADALLLKDEMVDRNI 481
A + A L+ + G P EI YN L+++LCK +V L L +EM+ + +
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRG-CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
PS+ T LI FC G+ A+ M +M+ G PD LING C + +A
Sbjct: 589 TPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + D+ +YN + +G L R + GF PN++T ++++
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFG 708
Query: 602 K 602
K
Sbjct: 709 K 709
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 203/431 (47%), Gaps = 32/431 (7%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS S N +L+ L+ NC V+ +M G+ PN +TF ++ C +VD
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L + + G P+ + Y TLI + K+ R+++A L M+ PD+ T+ T++ G C
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 322 KEGKVREAHQLFHRMVHRGLS-------------------------------PDIVSYNT 350
+ +V E +L RM+ +G + P++V +NT
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNT 351
Query: 351 LIFAYCKEGKMQESKSLLYE-MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
L+ + + G++ E+ + +Y+ M+ NG PD FT +V G K+G SAL LV ++
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G + + Y LI C+ + A +L + G+ + YN L+ +LCK + +A
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L + EM + KP + T+ +LI C + +A++L +M+ G++ +S LI+
Sbjct: 472 LDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++ +A L+ + D +YN + + G + K + L + +R G P+
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591
Query: 590 NLTCKYMIHSL 600
+TC +I+
Sbjct: 592 IITCNILINGF 602
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 223/460 (48%), Gaps = 14/460 (3%)
Query: 153 VELVKDCPH-SVDVFQDLIS---CTEDCNWAYVKVGL-----IRESFKTFRKTLDVGFQP 203
V +V +CP + +VF D++S D + V L + + R G P
Sbjct: 184 VLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVP 243
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ + L++ L K + +D+ ++ EEM +G P+ +TFN + + FC+ V + +
Sbjct: 244 NSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLV 303
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ +GF P+ +TY L+ CK R+++A + + + P++V + TL+NG +
Sbjct: 304 DRMILKGFTPNDMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRN 359
Query: 324 GKVREAHQ-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ EA ++ +M++ G PD+ +++TL+ CK+G + L+ +M G P+ T
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNT 419
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ G+ K+G+L A ++ E+ G S++ Y+ LI ALC+ + A + +
Sbjct: 420 YTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMS 479
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P + +N L+ LC+ D + DAL L +MV + + T+ LI F G
Sbjct: 480 SKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQ 539
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA+ L+++ML G D LI C V K L +K + N +
Sbjct: 540 EALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILI 599
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N F G + +E + + GF+P+ +T +I+ L K
Sbjct: 600 NGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCK 639
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 47/314 (14%)
Query: 118 NDLEIK---PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
ND++ K P + Y +++ + A +L E+ L K + + LIS
Sbjct: 406 NDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM--LTKGFSLNTVGYNALIS--- 460
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
A K G I E+ F + G +P I + N L+ GL +++ ++ +Y +M
Sbjct: 461 ----ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE 516
Query: 235 GICPNTHTFNILTHVF-----------------------------------CKNGDVDKV 259
G+ N+ TFN L H F CK G V+K
Sbjct: 517 GVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKG 576
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G E++ +G P ++T N LI+ +C G++++A R M R PD+VTY +L+NG
Sbjct: 577 LGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLING 636
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+++EA LF ++ G+ PD ++YNTLI C+EG ++ LLY + NG P+
Sbjct: 637 LCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696
Query: 380 TFTCQIIVQGYGKE 393
T I+V +GK+
Sbjct: 697 DVTWNILVYNFGKQ 710
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 106/191 (55%), Gaps = 1/191 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+++ G I+E+ K L G ++ N L+ L K +++ ++EEM R G+ P
Sbjct: 531 AFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTP 590
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T NIL + FC G V F+ + GF PD+VTYN+LI+ CK+GR+ +A L+
Sbjct: 591 SIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLF 650
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD +TY TL+ LC+EG +A L +R V G P+ V++N L++ + K+
Sbjct: 651 EKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQ 710
Query: 359 GKMQESKSLLY 369
E +++ Y
Sbjct: 711 SN-SEGQTITY 720
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 26/513 (5%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
SA FF+ + +D + P Y ++V L A+ +L ++ D P++V +
Sbjct: 140 SARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCD-PNAV-TYN 196
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L++ A+ + G + + + + G +P++V+ N ++NG+ K ++ +V
Sbjct: 197 TLVA-------AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKV 249
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM + G+ P+ ++N L +CK G + ++ +G PD+VT+ +LI CK
Sbjct: 250 FDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCK 309
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G L A L R M R + + +T+T L++G CK+G + +A M + P +V
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC 369
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN LI YC G+M E++ L+ EM G+ PD T I+ Y K G SA L ++
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
GV Y LI LC++ R A L + + G P Y L++ CK +V
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS------- 520
AL L DEMV + P + TY LI R+ EA L+ ++ +P +
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549
Query: 521 QICR--------VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ CR L+ G+CM+ +N+A+ + + D Y+ + + +G++
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVM 609
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLW-KGM 604
K + K+ L+ GFAPN+ + +I L+ KGM
Sbjct: 610 KALSFHKQMLQCGFAPNSTSTISLIRGLFEKGM 642
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 211/458 (46%), Gaps = 50/458 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ K F + + G P VS N L+ G K+ C + V+ EM R GI P+
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L HV CK G++++ G + ++ E G + +T+ LI +CKKG L+DA R M
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P +V Y L+NG C G++ EA +L M +G+ PD+V+Y+T++ AYCK G
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418
Query: 362 QESKSLLYEMMGNGIYPDTFT--------CQ---------------------------II 386
+ L +M+ NG+ PD T C+ +
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSL 478
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL+L E+ + GV Y LI L + R A LL ++ +
Sbjct: 479 IDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538
Query: 447 VPSLEIYNELM---------------ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
VP+ Y+ LM + C + +A + ++DRN S Y L
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C G +A+S +ML+ G P+S LI G + V +A+ ++
Sbjct: 599 IHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCS 658
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D E+ A+ ++ ++G++ ++++ R G P+
Sbjct: 659 LADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 205/415 (49%), Gaps = 11/415 (2%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW---- 178
T +YC ++H L + S A K L ++V K + VF + T+ +
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFS 59
Query: 179 ----AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY++ G +R++ + +R T + F +C +L L+KL W YEE+
Sbjct: 60 GLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 119
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L++
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDG 239
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPD 299
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ Y LI C+D A +R+ Q+ +Y L+ LC+ DA +
Sbjct: 300 KITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLR 359
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ +KP TY +I FC G + L+ EM G +P VL+NG
Sbjct: 360 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DL ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 54 DLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 174 GDLDEGFRLKSAMLASGVQ-----------------------------------PDVYTY 198
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+ + + P+ T+ LI C GR A+ + +ML
Sbjct: 199 SVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLS 258
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + +DGDL
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDT 318
Query: 574 LMELQKRFLR 583
E +KR ++
Sbjct: 319 AFEHRKRMIQ 328
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R D+ ++ L
Sbjct: 2 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSGL 61
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 62 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 121
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 122 PASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 181
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G++P+S LI+G+C
Sbjct: 182 LKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHC 241
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + L G P+ +
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 301
Query: 592 TCKYMI 597
T +I
Sbjct: 302 TYTTLI 307
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + ++ ++
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF 233
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 277
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 215/450 (47%), Gaps = 9/450 (2%)
Query: 162 SVDVFQDLISCTEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
S+D F LI+ N + G + ++ T K G P V+ N LLN
Sbjct: 193 SLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLN 252
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
+ + + + M + GI P T+N L + + G + + +E + GF+P
Sbjct: 253 AHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEP 312
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVREAHQL 332
DL TYN L + C+ G++++AF L M + ++ PD+VTY TL++ K + +A L
Sbjct: 313 DLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNL 372
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G+ +V++N ++ C+EG+++E+ L M G+ PD T ++ K
Sbjct: 373 LEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCK 432
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + A L+ E+ R G+ + + L+ LC++ R A LL Q G+VP
Sbjct: 433 AGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVS 492
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y +M + K AL L DEM+ R + PS+STY LI +G+ EA+ ++E++
Sbjct: 493 YGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM 552
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G++PD ++I+ YC E D+ KA + D + N + N G L
Sbjct: 553 EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLE 612
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K M+L + ++ G + +T +I +L K
Sbjct: 613 KAMKLFESWVEKGKKVDVITYNTLIQALCK 642
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 237/513 (46%), Gaps = 14/513 (2%)
Query: 91 GAHEISRVLLRCQSDSVSAL--TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKM 148
A+ + L R S S A F + + L + P + L+VH + A+
Sbjct: 174 AANAVLSALARSPSTSPQASLDAFHSLIA--LRLHPNHYTFNLLVHTHCSKGTLADALST 231
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
L ++ + D ++ N A+ + G++ E+ + G P+ +
Sbjct: 232 LSKM--------QGFGLSPDAVTYNTLLN-AHCRKGMLGEARTLLARMKKEGIVPTRATY 282
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L++ +L I Q V E M G P+ T+N+L C+ G VD+ +++E+
Sbjct: 283 NTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQ 342
Query: 269 EGF-DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G PD+VTYNTL+ + K R +DA L M + V LVT+ ++ GLC+EG++
Sbjct: 343 LGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLE 402
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA M GL+PD+++YNTLI A CK G + ++ L+ EM+ +G+ DTFT ++
Sbjct: 403 EALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLL 462
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
KE R A L+ + G Y ++ A ++ +P A L + + +
Sbjct: 463 YNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLT 522
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
PS+ YN L++ L + +A+ +E+++ + P +TY +I +C G +A
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQF 582
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
++M+E+ PD C L+NG C+ + KA L + +K + D +YN + +
Sbjct: 583 HNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCK 642
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D D+ + G P+ T ++ +L
Sbjct: 643 DNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 197/413 (47%), Gaps = 5/413 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCI--DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
+PS+ + N +L+ L + + + + + PN +TFN+L H C G +
Sbjct: 169 RPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADA 228
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L K++ G PD VTYNTL++++C+KG L +A L M + ++P TY TL++
Sbjct: 229 LSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSA 288
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-P 378
+ G +++A + M G PD+ +YN L C+ GK+ E+ L EM GI P
Sbjct: 289 YARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSP 348
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T +V K R ALNL+ E++ GV S ++ ++ LC++ + A L
Sbjct: 349 DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + ++G P + YN L+++ CK +VA A +L DEMV +K T L+ C
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
R EA L+ + G +PD ++ Y E A L K+ +Y
Sbjct: 469 KRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTY 528
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK--GMERKFQ 609
N + + G L++ ++ + +G P++ T +IH+ K +E+ FQ
Sbjct: 529 NTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQ 581
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 185/411 (45%), Gaps = 36/411 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC- 237
AY ++G I+++ GF+P + + N L GL + +D+ +++ +EM ++GI
Sbjct: 288 AYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVS 347
Query: 238 PNTHTFNIL------------------------------TH-----VFCKNGDVDKVNGF 262
P+ T+N L TH C+ G +++ G
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LE + EEG PD++TYNTLI + CK G + AF L M R + D T TL+ LCK
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 467
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E + EA +L RG PD VSY T++ AY KE K + + L EM+ + P T
Sbjct: 468 EKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSIST 527
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++G G+L A++ + EL G+ Y+ +I A C++ A ++
Sbjct: 528 YNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMV 587
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++ + P + N LM LC + A+ L + V++ K + TY LI C
Sbjct: 588 ENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVD 647
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
A+ +M G+ PD VL++ +A+ +L + ++Y
Sbjct: 648 TALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLY 698
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
PSI + N L+ GL + + + E+ +G+ P+ T+NI+ H +CK GD++K
Sbjct: 521 LTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAF 580
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
F K+ E F PD+VT NTL++ C GRL A L+ + D++TY TL+ L
Sbjct: 581 QFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQAL 640
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG----- 375
CK+ V A + F M RGL PD+ +YN L+ A + G+ E++ +L+++ +G
Sbjct: 641 CKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGR 700
Query: 376 -IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
YP + V+ GK+ + S + V Q ++ Y+ I LC + A
Sbjct: 701 FFYPSIKSSVEAVET-GKDPEVKSDIESVGNTQ----GDDQESYNKYIKELCIGGQLKEA 755
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCK 462
++L+ + Q G Y LME L K
Sbjct: 756 KAVLDEMMQKGMSVDNSTYITLMEGLIK 783
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 160/382 (41%), Gaps = 36/382 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + G P +++ N L++ K + + + + +EM R G+ +T T
Sbjct: 399 GQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTL 458
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV--------------------------- 276
N L + CK ++ L + GF PD V
Sbjct: 459 NTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIK 518
Query: 277 --------TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
TYNTLI G+L +A + ++PD TY +++ CKEG + +
Sbjct: 519 RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEK 578
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A Q ++MV PD+V+ NTL+ C G+++++ L + G D T ++Q
Sbjct: 579 AFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQ 638
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K+ + +AL +++ G+ Y+ L+ AL + R A +L ++ + G +
Sbjct: 639 ALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLY 698
Query: 449 SLEIYNELMESLCKCDSVADALLLKD-EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
Y + S+ ++ D + D E V +Y I C G+ EA ++
Sbjct: 699 GRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAV 758
Query: 508 MDEMLESGMLPDSQICRVLING 529
+DEM++ GM D+ L+ G
Sbjct: 759 LDEMMQKGMSVDNSTYITLMEG 780
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 49/280 (17%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNW 178
++ P+ S Y ++ L+ K + A+ L EL+E LV D D ++I
Sbjct: 520 KLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPD-----DTTYNIII------H 568
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G + ++F+ K ++ F+P +V+CN L+NGL +++ +++E G
Sbjct: 569 AYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKV 628
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR-------- 290
+ T+N L CK+ DVD F +E G PD+ TYN L+S+ + GR
Sbjct: 629 DVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKML 688
Query: 291 --LNDAFYLYRIMYRRNVLP--------------------------DLVTYTTLMNGLCK 322
LN++ LY + ++ D +Y + LC
Sbjct: 689 HKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCI 748
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
G+++EA + M+ +G+S D +Y TL+ K K Q
Sbjct: 749 GGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKRQ 788
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 160/611 (26%), Positives = 258/611 (42%), Gaps = 135/611 (22%)
Query: 110 LTFFNWVKNDL-EIKPTSSNYCLI--VHILAWNNKFSFAMKMLCELVE------------ 154
++FF W + + E P+ S LI V L ++KF+ A +L +
Sbjct: 59 VSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSL 118
Query: 155 ----LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
L P S +F +S AY+ G + + F+K + + +P++++CN
Sbjct: 119 LHPNLHLSPPPSKALFDIALS-------AYLHEGKPHVALQIFQKMIRLKLKPNLLTCNT 171
Query: 211 LLNGLLKLN---CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
LL GL++ I +V+++M +IG+ N TFN+L + +C G ++ G LE++
Sbjct: 172 LLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 268 EE------------------------------------GFDPDLVTYNTLISSYCKKGRL 291
E G P+ VTYN L+ YCK G L
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+AF + +M + NVLPDL TY L+NGLC G +RE +L M L PD+V+YNTL
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIY---------------------------------- 377
I + G E++ L+ +M +G+
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 378 --PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD T +++ Y K G L AL ++ E+ + G+ ++ + ++ ALC++ + A
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+LL + G++ Y L+ + + V AL + DEM I P++ST+ +LI
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA---------------- 539
C G++ A+ DE+ ESG+LPD +I GYC E V KA
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 540 ----------------EALLGFFAKKFQ--IYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
E L FF + DT +YN + + F +D L + +L
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 582 LRLGFAPNNLT 592
G P+ T
Sbjct: 652 EEKGLEPDRFT 662
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 203/444 (45%), Gaps = 54/444 (12%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTED------CNWAYVKVGLIRESFKTFRKTLD 198
++K ++VEL+K +V DL CT + CN G +RE +
Sbjct: 290 SLKEAFQIVELMK----QTNVLPDL--CTYNILINGLCN-----AGSMREGLELMDAMKS 338
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+ QP +V+ N L++G +L + ++ E+M G+ N T NI CK +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 259 VNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
V + E ++ GF PD+VTY+TLI +Y K G L+ A + R M ++ + + +T T++
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ LCKE K+ EAH L + RG D V+Y TLI + +E K+++
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK-------------- 504
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
AL + E+++ ++ + ++ LI LC + A
Sbjct: 505 ---------------------ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + + G +P +N ++ CK V A +E + + KP T L+ C
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G + +A++ + ++E + D+ +I+ +C +K + +A LL +K D +
Sbjct: 604 EGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 558 YNAVFNMFAEDGDLSKLMELQKRF 581
YN+ ++ EDG LS+ EL K+F
Sbjct: 663 YNSFISLLMEDGKLSETDELLKKF 686
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 171/344 (49%), Gaps = 13/344 (3%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---EGKVREA 329
P ++ +S+Y +G+ + A +++ M R + P+L+T TL+ GL + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQ 388
++F MV G+S ++ ++N L+ YC EGK++++ +L M+ + PD T I++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K+GRL L++++++ G+ +R Y+ L+ C+ A ++E + Q +P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
L YN L+ LC S+ + L L D M ++P + TY LI +G S EA LM
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY----DTESYNAVFNM 564
++M G+ + + + C E+ K EA+ + ++ D +Y+ +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEE---KREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ + GDLS +E+ + + G N +T ++ +L K ERK
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK--ERKL 467
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF V+ L+ G + +++ ++++EM ++ I P TFN L C +G +
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ E G PD T+N++I YCK+GR+ AF Y + + PD T L+NG
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCKEG +A F+ ++ D V+YNT+I A+CK+ K++E+ LL EM G+ PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
FT + ++G+L L+ + +FG S+ RD+
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKFSGKFG-SMKRDL 697
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 8/275 (2%)
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ L H +H P ++ + AY EGK + + +M+ + P+ TC ++ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175
Query: 390 ---YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
Y + SA + ++ + GVS++ ++ L+ C + + A +LER+ +
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 447 V-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
V P YN +++++ K ++D L +M + P+ TY L+ +C +G EA
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+++ M ++ +LPD +LING C + + L+ D +YN + +
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 566 AEDG---DLSKLME-LQKRFLRLGFAPNNLTCKYM 596
E G + KLME ++ ++ +N++ K++
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWL 390
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 212/432 (49%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
+ T+ + AY++ G +R++ + +R T + F +C +L L+K
Sbjct: 60 AIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ +A +R+ Q+ Y L+
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DJ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 71 DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 191 GDLDEGFRLKSAMLASGVQ-----------------------------------PDVYTY 215
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+ + + P+ T+ LI C GR A+ + +ML
Sbjct: 216 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + ++GDL
Sbjct: 276 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDS 335
Query: 574 LMELQKRFLR 583
E +KR ++
Sbjct: 336 AFEHRKRMIQ 345
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L Y T+++ LC + EA L +V R DJ ++ L
Sbjct: 19 LHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGL 78
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 79 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 138
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 139 PASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 198
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G++P+ LI+G+C
Sbjct: 199 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 258
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + L G P+ +
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 592 TCKYMI 597
T +I
Sbjct: 319 TYTTLI 324
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + + ++
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 250
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 208/434 (47%), Gaps = 11/434 (2%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL-KL 218
PH DVF ++ V+ GL+ E+ K F K L+ G S SCN L L K
Sbjct: 39 PHVFDVFFQVL----------VEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKR 88
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ + +V+ E ++G+C NT ++NIL + + G + + + L ++E +G PD+V+Y
Sbjct: 89 DMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSY 148
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
T+I YC G L L + M + + P+L TY++++ LCK GKV E ++ M+
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMK 208
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD V Y TLI +CK G Q + L EM I PD+ ++ G G+++
Sbjct: 209 RGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVE 268
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L E+ + G Y LI C+ A L ++ Q G P++ Y L +
Sbjct: 269 ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALAD 328
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LCK + A L EM + ++ ++STY ++ C G +AV LM+EM E+G+ P
Sbjct: 329 GLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHP 388
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D+ L++ Y ++ KA LL + ++N + N G L L
Sbjct: 389 DTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLL 448
Query: 579 KRFLRLGFAPNNLT 592
K L G PN T
Sbjct: 449 KWMLEKGIMPNAAT 462
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 197/378 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G IRE+ + G P +VS +++G + + + Q+ +EM G+ PN +
Sbjct: 122 RLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLY 181
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + + CK+G V + L ++ + G PD V Y TLI +CK G A+ L+ M
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++PD + ++ L+ GL GKV EA +LF+ M+ +G PD V+Y LI YCK G+M
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L +M+ G+ P+ T + G K G L +A L+ E+ R G+ ++ Y+ +
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTI 361
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ A L+E + + G P Y LM++ K + A L EM+DR +
Sbjct: 362 VNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGL 421
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ T+ L+ C G+ + L+ MLE G++P++ ++ YC+ ++ +
Sbjct: 422 QPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTE 481
Query: 542 LLGFFAKKFQIYDTESYN 559
+ + + D+ +YN
Sbjct: 482 IYRGMCAQGVVPDSNTYN 499
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 197/396 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E K R+ + G P V L++G KL ++++ EM I P++
Sbjct: 192 KSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSI 251
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+ L +G V + + ++ ++GF+PD VTY LI YCK G + AF+L+ M
Sbjct: 252 AFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQM 311
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTYT L +GLCK G++ A++L H M +GL +I +YNT++ CK G +
Sbjct: 312 VQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNI 371
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L+ EM G++PDT T ++ Y K G ++ A L+ E+ G+ + ++ L
Sbjct: 372 LQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVL 431
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC + LL+ + + G +P+ YN +M+ C +++ + + M + +
Sbjct: 432 MNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGV 491
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P +TY LI C EA L EM+E + LI G+ K + +A
Sbjct: 492 VPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQ 551
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L ++ + E YN +M E+G++ +EL
Sbjct: 552 LFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 226/452 (50%), Gaps = 27/452 (5%)
Query: 33 LQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGA 92
+Q++++ + K L LY + + I+ L+C S K + L + + + P
Sbjct: 165 VQLVKEMQLKGLKPNLYTY-------SSIILLLCKSGKVVEGEKVLREMMKRGVFPD--- 214
Query: 93 HEISRVLLR--CQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
H I L+ C+ ++ +A F+ ++ EI P S + ++ L+ + K A K+
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAR-EIVPDSIAFSALICGLSGSGKVVEADKLF 273
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
E+++ + P V + LI Y K+G ++++F + + +G P++V+
Sbjct: 274 NEMIKKGFE-PDEV-TYTALID-------GYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L +GL K +D ++ EM R G+ N T+N + + CK G++ + +E+++E
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G PD +TY TL+ +Y K G + A L R M R + P +VT+ LMNGLC GK+ +
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+L M+ +G+ P+ +YN+++ YC M+ S + M G+ PD+ T I+++G
Sbjct: 445 ERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504
Query: 390 YGKEGRLLSALNLVVEL--QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ K + A L E+ +RF ++ S Y+ LI + + A L E + ++G V
Sbjct: 505 HCKARNMKEAWFLHKEMVEKRFNLTASS--YNALIKGFFKRKKLLEARQLFEEMRREGLV 562
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
S EIYN ++ + ++ L L DE +++
Sbjct: 563 ASAEIYNLFVDMNYEEGNMETTLELCDEAIEK 594
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS-ALNLVVELQRFGVSISRDI 417
G + E++ +++ G+ +C + + + +L L + E + GV + +
Sbjct: 53 GLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTES 112
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ +L + + A LL R+ G +P + Y +++ C + + L EM
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +KP+L TY ++I C G+ E ++ EM++ G+ PD I LI+G+C +
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A L + + D+ +++A+ + G + + +L ++ GF P+ +T +I
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292
Query: 598 HSLWKGMERK 607
K E K
Sbjct: 293 DGYCKLGEMK 302
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 35/198 (17%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL----------------------- 215
AY K G + ++ + R+ LD G QP++V+ N L+NGL
Sbjct: 399 AYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP 458
Query: 216 --------LKLNCIDQ----CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+K CI ++Y M G+ P+++T+NIL CK ++ +
Sbjct: 459 NAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLH 518
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ E+ F+ +YN LI + K+ +L +A L+ M R ++ Y ++ +E
Sbjct: 519 KEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEE 578
Query: 324 GKVREAHQLFHRMVHRGL 341
G + +L + + L
Sbjct: 579 GNMETTLELCDEAIEKCL 596
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/514 (27%), Positives = 240/514 (46%), Gaps = 31/514 (6%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
SA FF+ + +D + P Y ++V L A+ +L ++ C +V +
Sbjct: 172 TSARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSILRDMRG--AGCGPNVVTY 228
Query: 167 QDLISC---TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
L++ + + A VG++RE G +P++V+ N ++NG+ K ++
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREG----------GLKPNLVTFNSMVNGMCKAGKMED 278
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+V++EM R G+ P+ ++N L +CK G + ++ ++G PD+VT+ +LI
Sbjct: 279 ARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIH 338
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
CK G L A L R M R + + VT+T L++G CK+G + +A M + P
Sbjct: 339 VMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKP 398
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+V YN LI YC G+M E++ LL+EM G+ PD T I+ Y K SA L
Sbjct: 399 SVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELN 458
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
++ GV Y LI LC + R A L + + + G P Y L++ CK
Sbjct: 459 QQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKE 518
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS--- 520
+V AL L D+MV + P + TY LI R+ EA L+ ++ +P +
Sbjct: 519 GNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKY 578
Query: 521 ----QICR--------VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
CR L+ G+CM+ +N+A+ + + D Y+ + +
Sbjct: 579 DALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRA 638
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++ K + K+ L+ GFAPN+ + +I L++
Sbjct: 639 GNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFE 672
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 209/458 (45%), Gaps = 50/458 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ K F + + G P VS N L+ G K C + V+ EM + GI P+
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L HV CK G++++ + ++ E G + VT+ LI +CKKG L+DA R M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK---- 357
+ + P +V Y L+NG C G++ EA +L H M +GL PD+V+Y+T+I AYCK
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451
Query: 358 -------------------------------EGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E ++ ++ L M+ G+ PD FT +
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + SAL+L ++ + GV Y LI L + R A LL ++ +
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571
Query: 447 VPSLEIYNELMESLCKCDSVADALLLK---------------DEMVDRNIKPSLSTYRAL 491
+P+ Y+ LM K + + LLK M+DRN S Y L
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 631
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C G +A+S +ML+ G P+S LI G V +A+ ++
Sbjct: 632 IHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCS 691
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D E+ A+ ++ +G++ ++++ + G P+
Sbjct: 692 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GYVPS+ YN ++ +L S+ A D M+ + P++ TY L+ CG G EA
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+S++ +M +G P+ L+ + +V+ AE L+G + + ++N++ N
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ G + ++ +R G AP+ ++ ++ K
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKA 308
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 90/215 (41%), Gaps = 15/215 (6%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + K + G P +V+ + L+NGL K + Q+ ++ P
Sbjct: 514 GHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIP 573
Query: 239 NTHTFNILTHV---------------FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ L H FC G +++ + + + + ++ D Y+ LI
Sbjct: 574 ANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIH 633
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+C+ G + A ++ M + P+ + +L+ GL + G V EA Q+ ++++
Sbjct: 634 GHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLA 693
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
D + LI EG + +L+ M +G+ P
Sbjct: 694 DAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 3/382 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E++ + + LD G P N L+ +++ + +++EM R G+ P TFN
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK D++ N + + G PD+ TY + CK GR+ DA ++ M R
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V P+ V +TTL++ CKEG V +L M RG+ D+V+YN L C+ ++ +
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
++ EM NG+ PD T ++ G+ KEG L A+ + E+ GV++ Y LI L
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ R + +L + + G P Y ++++ CK V L EM ++ KP +
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY ++ FC +G+ A L++ ML G+ PD +L++G+C V AE L
Sbjct: 525 VTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELK-- 582
Query: 546 FAKKFQIYDTESYNAVFNMFAE 567
+ K + D Y ++ N F +
Sbjct: 583 -SAKGMVSDFGLYTSLINEFVK 603
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 172/354 (48%), Gaps = 3/354 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
++ G + + F + L G P++V+ N L++G+ K + ++ + M + G+ P+
Sbjct: 255 IRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDV 314
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ CK G + E++ E G +P+ V + TLI ++CK+G + L+R
Sbjct: 315 YTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHRE 374
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + DLV Y L NGLC+ ++ A+ + M + GL PD V+Y TLI +CKEG+
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGE 434
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + + EM G+ D T ++ G K GR + + ++ E+ G+ Y
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTM 494
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I A C+++ LL+ + G P + YN +M C + +A +L + M++
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ P TY L+ C G+ +A L GM+ D + LIN + +K
Sbjct: 555 VCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKKK 605
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 161/337 (47%)
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
V + F ++ + G P+ +N L+ + G+L A ++ M RR V P +VT+ T
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
LM+G+CK + A+ L M G++PD+ +Y + CK G++Q++ + EM G
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+ P+T ++ + KEG + + L L E+ G+ Y+ L LC+ AA
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAAN 404
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
++E + +G P Y L++ CK + A+ +K EM D + TY LI
Sbjct: 405 DIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGL 464
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
GRS ++ ++ EM+E+G+ PD+ ++I+ +C DV LL K +
Sbjct: 465 SKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+YN V N F G + L L +G P+++T
Sbjct: 525 VTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDIT 561
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 143/301 (47%), Gaps = 9/301 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ +++ + + P Y + L + A++M E+ E + P+
Sbjct: 290 CKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVN-PN 348
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V VF LI A+ K G + + R+ G + +V+ N L NGL ++ +
Sbjct: 349 TV-VFTTLID-------AHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ EEM G+ P+ T+ L FCK G++D +++ +EG D VTY TL
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
IS K GR D+ + M + PD TYT +++ CK V+ +L M ++G
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGR 520
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P +V+YN ++ +C G+M+ + LL M+ G+ PD T I++ G+ K G++ A
Sbjct: 521 KPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEE 580
Query: 402 L 402
L
Sbjct: 581 L 581
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 4/330 (1%)
Query: 279 NTLISSYCKKGRLNDA-FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ + +Y +G L D L + RR V L ++ LMN L V EA+ + +++
Sbjct: 180 SAVAKAYADEGLLPDGCSLLLLLALRRGVRVPLPAWSDLMNRLPS---VPEAYAFYLQLL 236
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ P+ +N L+ + GK+ ++++ EM+ G+ P T ++ G K L
Sbjct: 237 DAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLN 296
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
SA L + + GV+ Y + LC+ R A + E + + G P+ ++ L+
Sbjct: 297 SANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLI 356
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
++ CK +VA L L EM R IK L Y AL C + A +++EM +G+
Sbjct: 357 DAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLK 416
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD LI+G+C E +++ A + + + D +Y + + ++ G +
Sbjct: 417 PDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERI 476
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ G P+N T +I + K + K
Sbjct: 477 LCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 214/432 (49%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + FS A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEA-KSLIQVVVSRKGKGSASXVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
NTL++ Y + G L++ F L +M V PD+ TY+ L+NGLCKE K+ +A++ F M+
Sbjct: 180 XNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ +K + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ ++ G+ + Y LI C++ +A +R+ Q+ +Y L+
Sbjct: 300 QAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM G
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHA 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 160/380 (42%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 45 VVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLW 104
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 105 VPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VS NTL+ Y + G + E L M+ +G+ PD +T +++ G K
Sbjct: 165 FDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCK 224
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A E+ G+ + + LI C++ R A + +++ +P L
Sbjct: 225 ESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLIT 284
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L D+M + +KP TY LI C G A M+
Sbjct: 285 YNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMI 344
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D + LI+G C E AE +L DT +Y + N F + GD+
Sbjct: 345 QENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVW 404
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G AP+ +T
Sbjct: 405 KGSKLLKEMQRDGHAPSVVT 424
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 205/431 (47%), Gaps = 46/431 (10%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN----- 177
+ T +YC ++H L + FS A K L ++V K + VF +I +
Sbjct: 10 RHTLHSYCTMIHFLCTHQMFSEA-KSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F +C +L L+KL + W YEE+
Sbjct: 69 FSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK GD+ + I + G P +V+YNTL++ Y + G LN
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
P Y L++ CK + A
Sbjct: 309 -----------------------------------PDKITYTTLIDGCCKEGDLDTAFEH 333
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+ M+ NI+ Y ALI C GRS +A +M EML G+ PD+ ++IN +C
Sbjct: 334 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCK 393
Query: 533 EKDVNKAEALL 543
+ DV K LL
Sbjct: 394 KGDVWKGSKLL 404
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 150/271 (55%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR + F G +PS+VS N L+NG ++L +++ +++ M G+ P+
Sbjct: 146 FCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N E++ +G P+ VT+ TLI +CK GR++ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++LPDL+TY TL+ GLCK+G + +AH L M +GL PD ++Y TLI CKEG
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + M+ I D ++ G +EGR + A ++ E+ FG+ Y
Sbjct: 326 DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DG+ PS+
Sbjct: 386 MIINEFCKKGDVWKGSKLLKEMQRDGHAPSV 416
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 161/380 (42%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F IE +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAAIIETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFW 98
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
+ +L LV + LM+ CKEG +R A +
Sbjct: 99 VPFDTCKKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSV 158
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M +G+ PD +T +++ G K
Sbjct: 159 FDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCK 218
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + +++ +P L
Sbjct: 219 ESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLIT 278
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK ++ A L DEM + +KP TY LI C G A M+
Sbjct: 279 YNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 338
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE ++ DT +Y + N F + GD+
Sbjct: 339 QENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVW 398
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G AP+ +T
Sbjct: 399 KGSKLLKEMQRDGHAPSVVT 418
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 9/226 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y ++++ L +K A ++ E+ LVK + F LI +
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFEEM--LVKGLVPNGVTFTTLID-------GHC 252
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + + +++ L P +++ N L+ GL K ++Q + +EM G+ P+
Sbjct: 253 KNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKI 312
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L CK GD+D +++ +E D V Y LIS C++GR DA + R M
Sbjct: 313 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREM 372
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ PD TYT ++N CK+G V + +L M G +P +V+
Sbjct: 373 LSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 213/432 (49%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + FS A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK+G++ + + M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+
Sbjct: 300 QANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM +G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 159/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 45 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLW 104
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 105 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M+ +G+ PD +T +++ G K
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCK 224
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C+ R A + +R+ +P L
Sbjct: 225 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLIT 284
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEMV + +KP TY LI C G A M+
Sbjct: 285 YNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L DT +Y + N F + GD+
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 404
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K L K R G P+ +T
Sbjct: 405 KGSRLLKEMQRNGHVPSVVT 424
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 207/400 (51%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +CN LL+ LLKLN I W VYEEM ++ I + TFNI+ ++ C+ G K F
Sbjct: 180 PKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDF 239
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ +E G P++VTYNT+I+ YC +G+ A +++ M +N+ PD TY + ++ LCK
Sbjct: 240 IGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCK 299
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E ++ EA + +++ GL P+ V+YN LI C +G + ++ + EMM GI FT
Sbjct: 300 ERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFT 359
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ E R+ A +++ E++ GV Y+ I C+ A SL + +
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMV 419
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++E Y L++ K + +++A + + + P + + ALI C G
Sbjct: 420 EKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNID 479
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A L+ EM + ++PD L+ GYC E+ V +A+ LL ++ D SYN +
Sbjct: 480 RAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLI 539
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +++ GD+ +E+ L LGF P LT +I K
Sbjct: 540 SGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 175/372 (47%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V+ N ++NG + ++++ M + P+ +T+N CK +++
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+G L K+ E G P+ VTYN LI C KG L+ AF M R ++ + TY L++
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L E ++ EA + M +G+ PD+V+YN I YC+ G +++ SL EM+ I P
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ +GK R+ A + + G+ +++ LI C + A LL+
Sbjct: 427 VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ VP +N LM+ C+ V +A L DEM +R IKP +Y LI + G
Sbjct: 487 EMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRG 546
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+A+ + DEML G P LI GY + + AE LL K D +Y
Sbjct: 547 DMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYL 606
Query: 560 AVFNMFAEDGDL 571
V + DL
Sbjct: 607 YVIEAMKTNDDL 618
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 161/341 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + K F+ D +P + N ++ L K I++ V ++ G+ P
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP 320
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L C GD+DK + +++ G + TYN LI + + R+ +A +
Sbjct: 321 NAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMI 380
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + V PD+VTY +NG C+ G ++A LF MV + + P + +Y +LI + K
Sbjct: 381 KEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKR 440
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+M E++ + + G+ PD ++ G+ G + A L+ E+ V +
Sbjct: 441 NRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTF 500
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ C++ + A LL+ + + G P YN L+ K + DAL + DEM+
Sbjct: 501 NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
P+L TY ALI + IG + A L+ EM G+ PD
Sbjct: 561 LGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 125/240 (52%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ ++ + G +P +V+ N +NG + + +++EM I P T+
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L VF K + + +K +EG PD++ +N LI +C G ++ AF L + M
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V+PD VT+ TLM G C+E KV EA +L M RG+ PD +SYNTLI Y K G M+++
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ EM+ G P T ++QGY K G A L+ E+Q G++ Y Y+I A+
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 14/363 (3%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDV 165
+A F +K D +KP Y + L + A +LC+L+E LV P++V
Sbjct: 270 AASKIFKTMK-DKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV---PNAVTY 325
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+ C CN G + ++F + ++ G S+ + N L++ L I++
Sbjct: 326 NALIDGC---CNK-----GDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ +EM G+ P+ T+NI + +C+ G+ K +++ E+ P + TY +LI +
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K+ R+++A ++ + +LPD++ + L++G C G + A QL M + + PD
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++NTL+ YC+E K++E+K LL EM GI PD + ++ GY K G + AL + E
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + Y+ LI + A LL + G P Y ++E++ D
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDD 617
Query: 466 VAD 468
+ +
Sbjct: 618 LVE 620
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 226/513 (44%), Gaps = 72/513 (14%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNW-----AYVKVGLIRESFKTFRKTLDVGFQPSI 205
EL +++K+ S DV I C AY V L+R + G P++
Sbjct: 331 ELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRT---------EGCSPNV 381
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRI-GICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
V+ + L+ GL ++Q W+VYE M + GI PN T+ L CK GD ++ E
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE 441
Query: 265 KIEEEGFD---------------------PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
++ E + P LVTYNTL++ K G + DA L M
Sbjct: 442 QMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIE 501
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD++T+ ++++GLCKE ++ +AH +F R + RG P++V+Y+TLI K KM E
Sbjct: 502 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 561
Query: 364 SKSLLYEMM-----------------------------------GNGIYPDTFTCQIIVQ 388
+ LL +M+ G PD T ++
Sbjct: 562 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 621
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ K RL A+ L+ E+ G S Y L LC+ R A +L+ + G P
Sbjct: 622 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 681
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ Y+ +++ LCK V +AL ++M D + P + Y ALI C GR EA
Sbjct: 682 NAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEF 741
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
++ M+ +G +PD +LING C ++ L A++ D +YNA+ N +
Sbjct: 742 LERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCL 801
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G+ S L + G A N +T +I +L
Sbjct: 802 KGEFSAAYALLEEMKTHGIAKNTVTHGIVIKAL 834
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 210/468 (44%), Gaps = 41/468 (8%)
Query: 110 LTFFNWVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-----------V 156
L N K LE +P Y ++ L+ K A+++L ++VEL V
Sbjct: 525 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTV 584
Query: 157 KDCPHSVDVFQDLI---------SCTEDCNW------AYVKVGLIRESFKTFRKTLDVGF 201
D V +D + C D + K +RE+ R+ L+ GF
Sbjct: 585 VDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 644
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
PS+V+ L +GL + D+ ++ + M G PN T++ + CK G V + G
Sbjct: 645 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 704
Query: 262 FLEKI-EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ EK+ +E P ++ Y+ LI CK GR+++A+ M R +PD+VT++ L+NGL
Sbjct: 705 YFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G++ +LF M RG DI +YN +I AYC +G+ + +LL EM +GI +T
Sbjct: 765 CDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNT 824
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI-----YDYLIVALCQDNRPFAAT 435
T I+++ R+ A++ + SI D Y+ LI +L R A
Sbjct: 825 VTHGIVIKALCGNDRIDEAVS-------YFHSIPEDCRDEISYNTLITSLVASRRSEQAL 877
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
LL + DG P Y +M+ L K S A L EM R P L TY +I
Sbjct: 878 ELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGL 937
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ A +EML + PD+ + LI+ +C V+ A LL
Sbjct: 938 SKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 211/432 (48%), Gaps = 11/432 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++F FRK + GF+P++V+ + +++GL + N +D+ ++ EEM G PN
Sbjct: 13 KAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAV 72
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + G + LE++ G P+L+T+ +I CK+G + AF + M
Sbjct: 73 TYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 132
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R +PD+ +T L++ LC+ G+V EA F +++ G +PD V+YNT++ K G++
Sbjct: 133 VDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRL 192
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + +L + + P FT I V G K G L A + + GVS + YD L
Sbjct: 193 EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDAL 252
Query: 422 IVALCQDNRPFAATSLL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
I LC+ + A LL ++ Q G ++ L+ LC+ + +A+ L M
Sbjct: 253 IDGLCKAGKLDIALGLLRDKNSQAGMFA----FSSLLHGLCQAHRLEEAIQLLKAM---P 305
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P++ + +L+ C R EA L D M ESG D +L+ G C + + +A
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365
Query: 541 ALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRL-GFAPNNLTCKYMIH 598
+ + + +++ + G +++ E+ +R + + G +PN T +++
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425
Query: 599 SLWK-GMERKFQ 609
L K G R+ +
Sbjct: 426 GLCKAGDSRRLE 437
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 205/460 (44%), Gaps = 65/460 (14%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V N L+NGL + +D+ +++++ M G + T+NIL CK + +
Sbjct: 308 PNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRH 367
Query: 263 LEKIEE-EGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGL 320
+E + EG P++VT++TLI C GR+N A+ +Y R++ + P+ TY L+ GL
Sbjct: 368 VELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGL 427
Query: 321 CKEGKVREAHQLFHRMVHRGLS---------------------PDIVSYNTLIFAYCKEG 359
CK G R Q F +M+ R P +V+YNTL+ K G
Sbjct: 428 CKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSG 487
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL---------------------- 397
++++ LL M+ +G+ PD T ++ G KE R+L
Sbjct: 488 MVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYS 547
Query: 398 -------------SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
AL L+ ++ G + Y ++ L + R A +L ++
Sbjct: 548 TLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA 607
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G +P YN L++ K + +A+ L EM++ PS+ TY L C GR EA
Sbjct: 608 GCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEA 667
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK----KFQIYDTESYNA 560
V ++D M G P++ +++G C V +A LG+F K + +Y+A
Sbjct: 668 VEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA---LGYFEKMARDEVVAPHVIAYSA 724
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + G + + E +R +R G P+ +T +I+ L
Sbjct: 725 LIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGL 764
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 182/422 (43%), Gaps = 46/422 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ Y + H L + +F A+++L + + C + + ++ K
Sbjct: 646 PSVVTYTTLCHGLCRSGRFDEAVEILDYMA--ARGCAPNAITYSSIVD-------GLCKA 696
Query: 184 GLIRESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ F K D P +++ + L++GL K ID+ ++ E M R G P+ T
Sbjct: 697 GRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVT 756
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F+IL + C G +D + E G D+ YN +I++YC KG + A+ L M
Sbjct: 757 FSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMK 816
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR--------------------------- 335
+ + VT+ ++ LC ++ EA FH
Sbjct: 817 THGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQA 876
Query: 336 ------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
MV G SPD +Y T++ K G + + LL EM G PD T I++ G
Sbjct: 877 LELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISG 936
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K +L A + E+ R + +Y LI A C+ ++ A LL G P+
Sbjct: 937 LSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPT 993
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ +Y+ +++SLCK AL + EM +N +P + + +L + GR EAV L++
Sbjct: 994 ITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVN 1053
Query: 510 EM 511
++
Sbjct: 1054 DL 1055
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 204/447 (45%), Gaps = 29/447 (6%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++G + E++ F++ L +GF P V+ N +++GL K ++ V + + P
Sbjct: 150 ALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSP 209
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
TF I K G++ F + + + G P+ VTY+ LI CK G+L+ A L
Sbjct: 210 TVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R +N + +++L++GLC+ ++ EA QL M P++V +N+L+ C+
Sbjct: 270 R---DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQA 323
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-GVSISRDI 417
++ E+ L M +G D T I+++G K R+ A V ++R G S +
Sbjct: 324 RRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVT 383
Query: 418 YDYLIVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ LI LC R A + ER + +G P+ Y L+E LCK ++M
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443
Query: 477 VDRN---------------------IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++R +P+L TY L+ G +A+ L++ M+ESG
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ PD +++G C E+ + A + ++ + +Y+ + + ++ + + +
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L + + LG N +T ++ L K
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLK 590
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 141/269 (52%)
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+VTYN LI+ CK GR+ DAF +R + P +VTY+T+++GLC++ +V + +L
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M RG +P+ V+YNTL+ A +G+ +E+ SLL M NG P+ T +I++G KEG
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ +A +V E+ G +I+ L+ ALC+ R A +++ G+ P YN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+++ L K + A ++ + + P++ T+ + G A D M ++
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALL 543
G+ P++ LI+G C ++ A LL
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLL 269
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 205/455 (45%), Gaps = 58/455 (12%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ + ++GL K + ++ ++ M + G+ PNT T++ L CK G +D G
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL 268
Query: 263 L-EKIEEEGF----------------------------DPDLVTYNTLISSYCKKGRLND 293
L +K + G P++V +N+L++ C+ R+++
Sbjct: 269 LRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDE 328
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RGLSPDIVSYNTLI 352
AF L+ +M D++TY L+ GLCK ++ EA++ M G SP++V+++TLI
Sbjct: 329 AFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLI 388
Query: 353 FAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEG---RLLSALNLVVELQR 408
C G++ ++ + M+ GI P+ FT +++G K G RL ++E +
Sbjct: 389 QGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREW 448
Query: 409 FGVS---ISRDIYDYLIVALCQDNRPFAAT------------------SLLERIGQDGYV 447
S I D+L+V +C RP T LLE + + G
Sbjct: 449 RSSSSWPIHSPEVDFLMVQVC---RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + +N +++ LCK + DA + ++R +P++ TY LI + + EA+ L
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ +M+E G ++ +++G + A +L + D +YN + + F +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + + L + L GF P+ +T + H L +
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 660
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 148/304 (48%), Gaps = 7/304 (2%)
Query: 242 TFNILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L + CK G V D F + I+ GF P +VTY+T+I C+ ++ L
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQF-GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R P+ VTY TL+N L +G+ +EA L RM G P+++++ +I CKEG+
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ + ++ EM+ G PD +++ + GR+ A ++ G + Y+
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L + R AA +L+ + + P++ + ++ L K ++ A D M
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLM-DEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ TY ALI C G+ A+ L+ D+ ++GM S L++G C + +A
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSS----LLHGLCQAHRLEEA 297
Query: 540 EALL 543
LL
Sbjct: 298 IQLL 301
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+S N L+ L+ +Q ++ M G P+ + + K G + L++
Sbjct: 858 ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQE 917
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ G PDL TY +IS K +L A + M R+N+ PD + Y++L++ CK K
Sbjct: 918 MRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK 977
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V +A +L G+ P I Y+T++ + CK ++ ++ EM P
Sbjct: 978 VDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTS 1034
Query: 386 IVQGYGKEGRLLSALNLVVELQ 407
+ Y EGR+ A+ LV +LQ
Sbjct: 1035 LATAYVAEGRVDEAVKLVNDLQ 1056
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 212/424 (50%), Gaps = 2/424 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ K D P VS N +L+ L K +++ + +M G+ PN +TFNI
Sbjct: 228 LSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNI 287
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L +CK G + + ++ + + PD+ TYN LI CK G++++AF L M
Sbjct: 288 LVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLK 347
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+LPD+VTY TL+NG + +L +M +G+ P+ V+YN ++ Y KEGKM +
Sbjct: 348 LLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG 407
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ L +M +G PD T ++ GY K GRL A ++ E+ R G+ ++ + ++ L
Sbjct: 408 NELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 467
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C + + A LL + GY Y L+ K +A+ L DEM ++ I PS+
Sbjct: 468 CGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSI 527
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +I C G++ +++ ++E+LESG++PD +I GYC E V KA
Sbjct: 528 ITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNK 587
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
KK D + N + +G L K ++L ++ G A + +T +I L K E
Sbjct: 588 MVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCK--E 645
Query: 606 RKFQ 609
+F+
Sbjct: 646 DRFE 649
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 220/467 (47%), Gaps = 19/467 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y I+ +L K + A +L ++ + + F L+S Y K+
Sbjct: 245 PDNVSYNTILDVLCKKGKLNEARDLLLDMKN--NGLLPNRNTFNILVS-------GYCKL 295
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + P + + N L+ GL K ID+ +++ +EM + + P+ T+
Sbjct: 296 GWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTY 355
Query: 244 NILTHVFCKNGDVD---KVNGF--LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N L NG D + GF ++K+E +G P+ VTYN ++ Y K+G++++A
Sbjct: 356 NTLI-----NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 410
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M PD VT+ TL+NG CK G++ EA ++ M +GL + V+ NT++ C E
Sbjct: 411 RKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 470
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ ++ LL G + D + ++ GY K+G+ + A+ L E++ + S Y
Sbjct: 471 RKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITY 530
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LC + + L + + G VP YN ++ C+ V A ++MV
Sbjct: 531 NTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVK 590
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ KP L T L+ C G +A+ L + + G D+ +I+G C E +
Sbjct: 591 KSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEE 650
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
A LL +K D +YNA+ + A+ G + + E R + G
Sbjct: 651 AFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/529 (24%), Positives = 227/529 (42%), Gaps = 74/529 (13%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
++ P+ + N I+D++C K ++ LL LLP+ I VS
Sbjct: 241 FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNIL----------VS 290
Query: 109 ALTFFNWVKNDLEI---------KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
W+K ++ P Y +++ L + K A ++ E+ E +K
Sbjct: 291 GYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEM-ENLKLL 349
Query: 160 PHSVDVFQDLISCTEDCN-----------------------------WAYVKVGLIRESF 190
P V + LI+ DC+ W YVK G + +
Sbjct: 350 PDVV-TYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKW-YVKEGKMDNAG 407
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
RK + GF P V+ N L+NG K + + +++ +EM R G+ N+ T N + H
Sbjct: 408 NELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTL 467
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C +D L + G+ D V+Y TLI Y K G+ +A L+ M + ++P +
Sbjct: 468 CGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSI 527
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+TY T++ GLC GK ++ + ++ GL PD +YNT+I YC+EG+++++ +
Sbjct: 528 ITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNK 587
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ PD FTC I+++G EG L AL L G +I Y+ +I LC+++R
Sbjct: 588 MVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDR 647
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL----------LLKDEMVDRN 480
A LL + + P YN ++ +L + +A L+D+ + N
Sbjct: 648 FEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLN 707
Query: 481 IK-------------PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ P+ T+ I C G+ +A+ ++ E + G+
Sbjct: 708 KRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGI 756
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ ++ K F + G V+ N +++GL K + ++ + + EM + P+ +T+
Sbjct: 611 GMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTY 670
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEG-----------------------FDPDLVTYNT 280
N + G + + F+ +I E+G DP+ VT++
Sbjct: 671 NAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSE 730
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
I+ C +G+ DA ++ + ++ + TY +LM GL K K
Sbjct: 731 QINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 38/222 (17%)
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK- 473
R I D I A NRP A + R+ + P+L N L+ +L + S L K
Sbjct: 139 RVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKA 198
Query: 474 --DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE------------------ 513
+++ +K + +T+ LI C + EA+ L+ +M +
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258
Query: 514 -----------------SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+G+LP+ +L++GYC + +A ++ A+ + D
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+YN + +DG + + L+ L P+ +T +I+
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLIN 360
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 228/481 (47%), Gaps = 9/481 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP + Y I+ L + A + ++V+ K S + +I
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD--KGVKPSNVTYNTIID-------GLC 306
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + + F++ +D G +P V+ N +++GL K ID+ V+++M G+ P+
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ I+ CK VD+ G +++ ++G P+ TYN LI Y G+ + + M
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ PD+ TY L++ LCK GK EA LF M+ +G+ P + Y ++ Y K+G +
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E LL M+ NGI P+ ++ Y K + +++ +++++ G+S + Y L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+ R A ++ +G P+ ++N L+ LC D L EM+++ I
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + + ++C C GR EA L+D M+ G+ PD LI+G+C +++A
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL + SYN + + + + G + L + LR G P T +++ L+
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLF 726
Query: 602 K 602
+
Sbjct: 727 R 727
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 244/528 (46%), Gaps = 16/528 (3%)
Query: 53 PETQNPNKIVDLICSSL---KKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
P+ N I+D +C + + D +++ +KP ++ + I L + Q ++
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP--NNVTYNTIIDGLCKAQEVDMAE 280
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
F V D +KP++ Y I+ L A + ++++ H + +
Sbjct: 281 GVFQKMV--DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVT--YNTI 336
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I K I ++ F++ +D G +P ++ +++GL K +D+ V++
Sbjct: 337 ID-------GLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQ 389
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M G+ PN T+N L H + G ++V ++++ +PD+ TY L+ CK G
Sbjct: 390 QMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNG 449
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ N+A L+ M R+ + P + Y +++G K+G + E H L + MV G+SP+ +N
Sbjct: 450 KCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFN 509
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T+I AY K + E + +M G+ P+ T ++ K GR+ A+ ++
Sbjct: 510 TVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINE 569
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
GV+ + +++ L+ LC ++ L + G P + +N ++ +LCK V +A
Sbjct: 570 GVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEA 629
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L D MV +KP + +Y LI C R EAV L+D M+ +G+ P+ L++G
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHG 689
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
YC ++ A L +K E+YN + N G S+ EL
Sbjct: 690 YCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAREL 737
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 205/442 (46%), Gaps = 35/442 (7%)
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
K + L++G P +V+ N +++GL K +D+ V+++M G+ PN T+N +
Sbjct: 211 KAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGL 270
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK +VD G +K+ ++G P VTYNT+I CK ++ A +++ M R V PD
Sbjct: 271 CKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDH 330
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
VTY T+++GLCK + +A +F +M+ +G+ PD ++Y +I CK + ++ + +
Sbjct: 331 VTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQ 390
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ G+ P+ T ++ GY G+ + + E+ + Y L+ LC++ +
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL------------------ 472
A SL + + + G PS+ IY ++ K ++++ L
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510
Query: 473 ------KDEMVD-----------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
K M+D + + P++ TY LI C +GR +AV ++M+ G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ P++ + L+ G C K E L + D +N V ++G + +
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630
Query: 576 ELQKRFLRLGFAPNNLTCKYMI 597
L + +G P+ ++ +I
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLI 652
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 199/414 (48%), Gaps = 8/414 (1%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--GRIGIC-PNTHTFNILTHV 249
R+ +VG + +VS N LL GL ++ ++ M G+ C P+ ++NI+ +
Sbjct: 143 LRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVING 202
Query: 250 FCKNGDVDKVNG-FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
F G VDK FLE G PD+VTYNT+I CK ++ A +++ M + V P
Sbjct: 203 FFNEGQVDKAYSLFLEM----GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ VTY T+++GLCK +V A +F +MV +G+ P V+YNT+I CK + ++ +
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M+ G+ PD T I+ G K + A + ++ GV Y +I LC+
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A + +++ G P+ YN L+ + + EM +++P + TY
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY 438
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ C G+ EA SL D M+ G+ P I ++++GY + +++ LL
Sbjct: 439 GLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVA 498
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +N V +A+ + ++M + + + G +PN +T +I +L K
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/549 (22%), Positives = 248/549 (45%), Gaps = 12/549 (2%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLP-HLGAHEISRVLLRCQSDSVSALT 111
P N I+D +C + + Q + + P H+ + I L + Q+ +
Sbjct: 293 PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGV 352
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F + D +KP + Y +I+ L A + ++++ K + + LI
Sbjct: 353 FQQMI--DKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID--KGVKPNNGTYNCLIH 408
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
Y+ G E + ++ +P + + LL+ L K ++ +++ M
Sbjct: 409 -------GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
R GI P+ + I+ H + K G + +++ L + G P+ +NT+I +Y K+ +
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMI 521
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++ +++ M ++ + P++VTY TL++ LCK G+V +A F++M++ G++P+ V +N+L
Sbjct: 522 DEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
++ C K ++ + L EM+ GI PD ++ KEGR++ A L+ + G+
Sbjct: 582 VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGL 641
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
Y+ LI C +R A LL+ + G P++ YN L+ CK + +A
Sbjct: 642 KPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYC 701
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L EM+ + + P + TY ++ GR EA L M++S L ++++G+C
Sbjct: 702 LFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFC 761
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
++A + D ++N + + + G M+L G P+ +
Sbjct: 762 KNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVV 821
Query: 592 TCKYMIHSL 600
T + + +L
Sbjct: 822 TYRLIAENL 830
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 9/447 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP+ + Y +++H S +L +V H + F +I AY
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRI--FNTVIC-------AYA 516
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K +I E F K G P++V+ L++ L KL +D + +M G+ PN
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L + C +KV ++ +G PD+V +NT++ + CK+GR+ +A L M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD+++Y TL++G C ++ EA +L MV GL P+IVSYNTL+ YCK G++
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM+ G+ P T I+ G + GR A L V + + S Y +
Sbjct: 697 DNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C++N A + + + + +N +++ L K DA+ L + +
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
PS+ TYR + G E L M +SG P+S + LI ++ +A A
Sbjct: 817 VPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGA 876
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAED 568
L +K + + + + ++F+ +
Sbjct: 877 YLSKLDEKNFSLEASTTSMLISLFSRE 903
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 242/560 (43%), Gaps = 53/560 (9%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLP-HLGAHEISRVLLRCQSDSVSALT 111
P+ N I+D +C + + Q K + P +L I L + QS +
Sbjct: 328 PDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD-CPHSV--DVFQD 168
F + D +KP + Y ++H ++ E+V+ +K+ H + DVF
Sbjct: 388 FQQMI--DKGVKPNNGTYNCLIHGYLSTGQWE-------EVVQRIKEMSAHDLEPDVFTY 438
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+ C K G E+ F + G +PS+ +L+G K + + +
Sbjct: 439 GLLLDYLC-----KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M GI PN FN + + K +D+V K++++G P++VTY TLI + CK
Sbjct: 494 NLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKL 553
Query: 289 GRLNDAFY-----------------------------------LYRIMYRRNVLPDLVTY 313
GR++DA L+ M + + PD+V +
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
T++ LCKEG+V EA +L MV GL PD++SYNTLI +C +M E+ LL M+
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G+ P+ + ++ GY K GR+ +A L E+ R GV+ + Y+ ++ L + R
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A L + + + S+ Y+ +++ CK + +A + + +++ + T+ +I
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
GR +A+ L + +G++P R++ E + + + L K
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853
Query: 554 DTESYNAVFNMFAEDGDLSK 573
++ NA+ + G++ +
Sbjct: 854 NSHMLNALIRKLLDRGEIPR 873
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 7/331 (2%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA-HQ 331
PD TY+ +I +C+ GRL F + ++ + D + L+ GLC +V EA H
Sbjct: 82 PDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHV 141
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM---GNGIYPDTFTCQIIVQ 388
L +M G +VSYNTL+ C + +E++ LL+ M+ + PD + I++
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVIN 201
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ EG++ A +L +E+ GVS Y+ +I LC+ A + +++ + G P
Sbjct: 202 GFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ YN +++ LCK V A + +MVD+ +KPS TY +I C A +
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+M++ G+ PD +I+G C + ++KAE + K D +Y + + +
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + + ++ + G PNN T +IH
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLIHG 409
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K + G +P+IVS N LL+G K ID + ++ EM R G+ P T+N +
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ ++G + + + + TY+ ++ +CK ++AF +++ + ++
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D++T+ +++GL K G+ +A LF + GL P +V+Y + +EG ++E L
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M +G P++ +++ G + A + +L S+ LI +
Sbjct: 843 FSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902
Query: 428 DNRPFAATSLLER 440
+ A SL E+
Sbjct: 903 EEYQQHAKSLPEK 915
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 418 YDYLIVALCQDNR---PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL-LLK 473
Y +I C+ R FAA L I + G+ + N+L++ LC V +A+ +L
Sbjct: 87 YSIVIGCFCRIGRLELGFAAFGL---ILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE---SGMLPDSQICRVLINGY 530
+M + + + +Y L+ C R+ EA L+ M++ S PD ++ING+
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
E V+KA +L F + D +YN + + + ++ + ++ ++ + G PNN
Sbjct: 204 FNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260
Query: 591 LTCKYMIHSLWKGME 605
+T +I L K E
Sbjct: 261 VTYNTIIDGLCKAQE 275
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 58/164 (35%), Gaps = 42/164 (25%)
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA- 539
+ P TY +I CFC IGR + +L++G D + L+ G C K V +A
Sbjct: 80 VAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAM 139
Query: 540 -------------------EALLGFFAKKFQIY-------------------DTESYNAV 561
LL + + D SYN V
Sbjct: 140 HVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIV 199
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
N F +G + K L FL +G +P+ +T +I L K E
Sbjct: 200 INGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQE 240
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 232/480 (48%), Gaps = 14/480 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++H L NN+ S A+++L ++ + C V F D+I +
Sbjct: 238 PNSVIYQTLIHALCENNRVSEALQLLEDMFLMC--CEPDVQTFNDVIH-------GLCRA 288
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ K + L GF ++ +L++GL ++ +D+ + ++ PNT +
Sbjct: 289 GRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLY 344
Query: 244 NILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + +G ++ L + G++PD T+N +I KKG L A L M
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P+++TYT L+NG CK+G++ EA ++ + M +GLS + V YN LI A CK+G ++
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIE 464
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L EM G G PD +T ++ G K ++ AL+L ++ GV + Y+ L+
Sbjct: 465 EALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLV 524
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A + A L++ + G YN L+++LCK +V L L +EM+ + I
Sbjct: 525 HAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ + LI C G+ +A+ + +M+ G+ PD LING C V +A L
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNL 644
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +YN + + +G + L + + GF PN +T +I+ + K
Sbjct: 645 FNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 206/419 (49%), Gaps = 9/419 (2%)
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
R + F L G P++ + ++ L ++ +D + +M + G PN+ + L
Sbjct: 187 RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTL 246
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
H C+N V + LE + +PD+ T+N +I C+ GR+++A L M R
Sbjct: 247 IHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGF 306
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
D +TY LM+GLC+ G+V EA L +++ + P+ V YNTLI Y G+ +E+K
Sbjct: 307 STDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKD 362
Query: 367 LLY-EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL--QRFGVSISRDIYDYLIV 423
LLY M+ G PD +T I++ G K+G L+SAL L+ E+ +RF ++ Y LI
Sbjct: 363 LLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVI--TYTILIN 420
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ R A ++ + G + YN L+ +LCK ++ +AL L EM + KP
Sbjct: 421 GFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKP 480
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ +LI C + EA+SL +M G++ ++ L++ + M + +A L+
Sbjct: 481 DIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLV 540
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +YN + + G + K + L + L G P ++C +I L +
Sbjct: 541 DEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCR 599
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 215/471 (45%), Gaps = 29/471 (6%)
Query: 142 FSFAMKMLCELVELVKDC------------PHSVDVFQDLISCTEDCNWAYVKVGLIRES 189
F MK LC + E+ C P+SV ++Q LI A + + E+
Sbjct: 208 FGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSV-IYQTLIH-------ALCENNRVSEA 259
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+ + +P + + N +++GL + I + ++ + M G + T+ L H
Sbjct: 260 LQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG 319
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIMYRRNVLP 308
C+ G VD+ L KI +P+ V YNTLIS Y GR +A LY M P
Sbjct: 320 LCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D T+ +++GL K+G + A +L + MV + P++++Y LI +CK+G+++E+ ++
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALC 426
M G+ +T ++ K+G + AL L E+ G DIY + LI LC
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMS--GKGCKPDIYTFNSLINGLC 493
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
++++ A SL + +G + + YN L+ + DS+ A L DEM+ R
Sbjct: 494 KNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNI 553
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LI C G + + L +EML G+ P C +LI+G C VN A L
Sbjct: 554 TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ D +YN++ N + G + + L + G P+ +T +I
Sbjct: 614 IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 9/198 (4%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL 185
+ Y +VH + A K++ E+ L + CP + LI A K G
Sbjct: 517 TVTYNTLVHAFLMRDSIQQAFKLVDEM--LFRGCPLDNITYNGLIK-------ALCKTGA 567
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ + F + L G P+I+SCN L++GL + ++ + ++M G+ P+ T+N
Sbjct: 568 VEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNS 627
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + CK G V + + K++ EG PD +TYNTLIS +C +G NDA L
Sbjct: 628 LINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSG 687
Query: 306 VLPDLVTYTTLMNGLCKE 323
+P+ VT++ L+N + K+
Sbjct: 688 FIPNEVTWSILINYIVKK 705
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 235/520 (45%), Gaps = 48/520 (9%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW---------- 178
YC+ VHIL S AM +L L C +F L+ C+
Sbjct: 111 YCMAVHILVQAQMPSQAMSVLRHLALTGFSCSA---IFSSLLRTISRCDPTNLFSVDLLV 167
Query: 179 -AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE------- 230
AYVK G + ++ + GF+ S+ SCN +LN L+ +N + W +E
Sbjct: 168 NAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFP 227
Query: 231 -------------------------MGRIGIC--PNTHTFNILTHVFCKNGDVDKVNGFL 263
+ ++ C PN T+N + + + K G L
Sbjct: 228 LDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRIL 287
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ +E+ G + DL TYN +I CK R A+ L + M N+ PD +Y TL++G E
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK+ A +F++M+ + L P + +Y LI YC+ G+ E++ +LYEM G+ P T
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GY K +L AL+L+ L+ +SI+R +Y LI CQ A +L+ +
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
DG P + Y+ L+ +CK + + + M + P+ Y L+ FC G + E
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ ++ SG++ +S I L+ + E + +AE + ++ +D S+N + +
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + G++ + + +R G+ P+ T ++ L +G
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQG 627
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 212/488 (43%), Gaps = 71/488 (14%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I + F + L +PS+ + L++G + D+ +V EM G+ P+ T+
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L + +CK+ + ++ + + Y LI +C+ G ++ A + + M
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD++TY+ L+NG+CK G + E ++ RM G+ P+ V Y TL+F +CK G +E
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ +G+ ++ ++ + +EG + A + R +S ++ +I
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIY------------------------------ 453
+ CQ A S+ + + + G+ P + Y
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 647
Query: 454 -----NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
N L+ +CK ++ +AL L ++MV RNI P TY L+ FC G+ A+ L+
Sbjct: 648 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-------GFFA-------------K 548
MLE G++PD+ L+NG E V A + G +A K
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767
Query: 549 KFQIYDTE----------------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
QI + E SYN + + + + G LS+ + L + ++ G P+N+T
Sbjct: 768 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 827
Query: 593 CKYMIHSL 600
+ +I L
Sbjct: 828 YRLLIFGL 835
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 217/482 (45%), Gaps = 16/482 (3%)
Query: 115 WVKNDLEIK-PTSSNYC-LIVHILAWNNKFSFAMKMLCELVELVKDC--PHSVDVFQDLI 170
++K L+ K P C ++++ L K S A ML + +K+C P++V L
Sbjct: 217 FLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESML----QKMKNCRLPNAVTYNTIL- 271
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
NW YVK G + + + G + + + N +++ L KL + + + +
Sbjct: 272 ------NW-YVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKR 324
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + + P+ ++N L H F G ++ ++ + P + TY LI YC+ GR
Sbjct: 325 MREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGR 384
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
++A + M V P +TY+ L+NG CK K+ A L + R +S + Y
Sbjct: 385 TDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTI 444
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI +C+ G++ ++K +L M+ +GI PD T ++ G K G + ++ +Q+ G
Sbjct: 445 LIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 504
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
V + +Y L+ C+ A I + G V + I+N L+ S + +A+A
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
K M I ++++ +I +C G EA S+ D M+ G PD L+ G
Sbjct: 565 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 624
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C + +A+ + + +K D ++ N + + G L + ++L ++ + P+
Sbjct: 625 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 684
Query: 591 LT 592
T
Sbjct: 685 YT 686
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 196/463 (42%), Gaps = 52/463 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y + G + E+F + + G+ P I + LL GL + + Q + +
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 647
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T N L CK+G +D+ EK+ PD TY L+ +CK+G++ A L
Sbjct: 648 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-HRGLSPDIVSYNTLIFAYCK 357
++M + ++PD + YT L+NGL EG+V+ A +F ++ GL D ++YN+++ Y K
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ E + L+ M N +YP + + I++ GY K+G+L L L ++ + G+
Sbjct: 768 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 827
Query: 418 YDYLIVALCQ---------------------DNRPF------------------------ 432
Y LI LC+ DN F
Sbjct: 828 YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887
Query: 433 ------AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
A L E + G VPS + ++ LCKC V +A+++ ++ + P+++
Sbjct: 888 WVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIA 947
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
T+ L+ C + +A L M G+ D VLI G C +K + A L
Sbjct: 948 TFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM 1007
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
K + + +Y + G + +L K G P+
Sbjct: 1008 KSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 266/668 (39%), Gaps = 124/668 (18%)
Query: 32 SLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLG 91
+L+I+ D E + LY + N ++D +C + ++L L + L P
Sbjct: 283 ALRILDDMEKNGIEADLYTY-------NIMIDKLCKLKRSARAYLLLKRMREVNLTPDEC 335
Query: 92 AHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
++ + A+ FN + +KP+ + Y ++ N + A ++L E
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLRQ-SLKPSVATYTALIDGYCRNGRTDEARRVLYE 394
Query: 152 L-------VELVKD------CPHS-----VDVFQDLISCTEDCNW--------AYVKVGL 185
+ EL C HS +D+ + L S + N + ++G
Sbjct: 395 MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ + + L G P +++ + L+NG+ K+ I + ++ M + G+ PN +
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514
Query: 246 LTHVFCKNGDVDKV-------------------NGFLEKIEEEGFDP------------- 273
L FCK G + N L EG
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574
Query: 274 ---DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D+ ++N +I SYC++G + +AF +Y M R PD+ TY +L+ GLC+ G + +A
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ ++ + + D + NTL+ CK G + E+ L +M+ I PDT+T I++ G+
Sbjct: 635 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 694
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI--------- 441
K G+++ AL L+ + G+ Y L+ L + + AA+ + + I
Sbjct: 695 CKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754
Query: 442 ------GQDGYV---------------------PSLEIYNELMESLCKCDSVADALLLKD 474
+GY+ PS YN LM K ++ L L
Sbjct: 755 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 814
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+MV IKP TYR LI C G AV +++M+ G+ PD+ +LI + +
Sbjct: 815 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 874
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ A L F+ GD+ EL++ LG P+ +
Sbjct: 875 KMSNALQL-------------------FSYMKWVGDIDGAFELKEDMKALGVVPSEVAES 915
Query: 595 YMIHSLWK 602
++ L K
Sbjct: 916 SIVRGLCK 923
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 49/390 (12%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGD--SHLTLLQNDL-KPLLPHLGAHEISRVLLRCQSDS 106
N LP+T ++D C K+G L LLQ L K L+P D+
Sbjct: 679 NILPDTYTYTILLDGFC---KRGKVVPALILLQMMLEKGLVP----------------DT 719
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIV-------HILAWNNKFSFAMK--MLCELVELVK 157
++ N + N+ ++K S + I+ +A+N+ + +K + E+ L++
Sbjct: 720 IAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMR 779
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
+ H +V+ S Y+K G + + +R + G +P V+ L+ GL +
Sbjct: 780 NM-HENEVYPSSAS-YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 837
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN----------------GDVDKVNG 261
I+ + E+M G+ P+ F+IL F + GD+D
Sbjct: 838 YGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFE 897
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
E ++ G P V ++++ CK G++ +A ++ + R ++P + T+TTLM+GLC
Sbjct: 898 LKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLC 957
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KE K+ +A L M GL D+V+YN LI C + + ++ L EM G+ P+
Sbjct: 958 KEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNIT 1017
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
T + G + L+ +++ G+
Sbjct: 1018 TYITLTGAMYATGTMQDGEKLLKDIEDRGI 1047
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV-ELVKDCPHSVDVFQDLISCTEDCNWA 179
E+ P+S++Y +++H + S + + ++V E +K P +V ++ LI +
Sbjct: 785 EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIK--PDNV-TYRLLI-------FG 834
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK----------------LNCIDQ 223
+ GLI + K K + G P ++ + L+ + + ID
Sbjct: 835 LCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDG 894
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+++ E+M +G+ P+ + + CK G V++ I G P + T+ TL+
Sbjct: 895 AFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMH 954
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
CK+ +++DAF+L ++M + D+VTY L+ GLC + + +A L+ M +GL P
Sbjct: 955 GLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLP 1014
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
+I +Y TL A G MQ+ + LL ++ GI P
Sbjct: 1015 NITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 1049
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 206/401 (51%), Gaps = 10/401 (2%)
Query: 209 NFLLNGLLKLNCIDQCWQVYE-EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N +L L + + +++ EM R G+ P T+N + + CK+ ++ E++
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E G PD+VTYNTLI S CK G L +A L+ M R+ +P++VTY+ L+NGLCK G++
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303
Query: 328 EAHQLFHRMVHRGLS--PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTC 383
EA +L M + P+I++YN+ + CK+ E+ L+ + + PDT T
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF 363
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G++ A ++ ++ G + Y+ L+ LC+ ++ A +++E +
Sbjct: 364 STLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 423
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P + Y+ L+++ CK V +AL L M R P++ T+ ++I C RSGE
Sbjct: 424 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGE 483
Query: 504 AVSLMDEM-LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A + D+M L+ G++PD LI+G +AEALL DT ++N
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDP----DTYAFNCCI 539
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N ++ GD+S+ +++ R L L P+ +T +I K
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKA 580
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 220/500 (44%), Gaps = 85/500 (17%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ F + + QP +++ L++GL K ++ + + MG +G+ PN
Sbjct: 579 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 638
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L H CK+G +++ FLE++ G PD +TY +L+ + C+ R +DA L +
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD VTY L++GL K G+ +A + MV +G PD+V+YNTLI + CK G +
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758
Query: 362 QESKSLLYEM---MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+E++ L +M + P+ T +++ G K GR+ A L+ E+ R + +I
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818
Query: 419 DY---------------------------------------LIVALCQDNRPFAATSLLE 439
Y LI LC+ + A ++ +
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC--- 496
+ GYVP++ YN LM LCK D + A + + MVD+ + P + TY L+ FC
Sbjct: 879 DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 938
Query: 497 ----------GIG----------------------RSGEAVSLMDEM-LESGMLPDSQIC 523
G+ +SGEA + D+M L+ G+ PD
Sbjct: 939 HVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITY 998
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI+G +AE LL DT ++N N ++ GD+S+ + R L
Sbjct: 999 CTLIDGLFRTGWAGQAEVLLDAMPDP----DTYAFNCCINGLSKLGDVSRALH---RMLE 1051
Query: 584 LGFAPNNLTCKYMIHSLWKG 603
L P+ +T +I K
Sbjct: 1052 LELVPDKVTFNILIAGACKA 1071
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 215/465 (46%), Gaps = 47/465 (10%)
Query: 185 LIRESFKTFRKT-----LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
LI F+T R LD P + N +NGL KL + + QVY M + + P+
Sbjct: 507 LIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPD 566
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TFNIL CK G+ ++ + E++ + PD++T+ LI CK G++ A +
Sbjct: 567 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD 626
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M V P++VTY L++GLCK G++ EA Q MV G PD ++Y +L++A C+
Sbjct: 627 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS 686
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL------------- 406
+ ++ L+ E+ G PDT T I+V G K G+ A+ ++ E+
Sbjct: 687 RTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYN 746
Query: 407 ---------------QRFGVSISRDI----------YDYLIVALCQDNRPFAATSLLERI 441
+R +S + Y LI LC+ R A L++ +
Sbjct: 747 TLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806
Query: 442 GQDG--YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK--PSLSTYRALICCFCG 497
+ +P++ YN ++ LCK +A+A L + D +++ P T+ LI C
Sbjct: 807 MRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCK 866
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G++ EA ++ D+M+ G +P+ VL+NG C + +A A++ K D +
Sbjct: 867 CGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVIT 926
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y+ + + F + + + +EL G PN +T +I L K
Sbjct: 927 YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 971
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/524 (26%), Positives = 241/524 (45%), Gaps = 50/524 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +V+ L +K A M+ +V+ K V + L+ A+ K
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVD--KGVTPDVITYSVLVD-------AFCKA 443
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM------------ 231
+ E+ + G P++V+ N +++GL K + + +Q++++M
Sbjct: 444 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKIT 503
Query: 232 -----------GRIGIC---------PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
GR G P+T+ FN + K GDV + ++ E
Sbjct: 504 YCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELEL 563
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD VT+N LI+ CK G A L+ M +N+ PD++T+ L++GLCK G+V A
Sbjct: 564 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARD 623
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ M + G+ P++V+YN L+ CK G+++E+ L EM+ +G PD+ T +V
Sbjct: 624 ILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC 683
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
+ R AL LV EL+ FG Y+ L+ L + + A ++LE + G+ P +
Sbjct: 684 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743
Query: 452 IYNELMESLCKCDSVADALLLKDEM---VDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
YN L++SLCK + +A L +M V R P++ TY LI C +GR EA L+
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 509 DEMLESG--MLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIY-DTESYNAVFNM 564
EM+ +LP+ ++G C + + +A E + ++ DT +++ + +
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MER 606
+ G + + + G+ PN +T +++ L K MER
Sbjct: 864 LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMER 907
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/507 (25%), Positives = 234/507 (46%), Gaps = 22/507 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
++ AL F + PT Y I++ L +N+ M++ ELVE H
Sbjct: 194 GETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER----GHHP 249
Query: 164 DV--FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
DV + LI + K G + E+ + P++V+ + L+NGL K+ I
Sbjct: 250 DVVTYNTLID-------SLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302
Query: 222 DQCWQVYEEMGR--IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF--DPDLVT 277
D+ ++ +EM R + PN T+N CK + + + + PD VT
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
++TLI CK G++++A ++ M +P+++TY L+NGLCK K+ AH + MV
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+G++PD+++Y+ L+ A+CK ++ E+ LL+ M G P+ T I+ G K R
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482
Query: 398 SALNLVVELQ-RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A + ++ + G+ + Y LI L + R A +LL+ + P +N
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCC 538
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ L K V+ AL + + M++ + P T+ LI C G +A +L +EM+ +
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD LI+G C V A +L + +YNA+ + + G + + +
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 658
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + G P+++T ++++L +
Sbjct: 659 FLEEMVSSGCVPDSITYGSLVYALCRA 685
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 230/512 (44%), Gaps = 45/512 (8%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ V A + +L + P Y +VH L + + A + L E+V C
Sbjct: 613 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS--SGCVP 670
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ L+ +A + ++ + + G+ P V+ N L++GL K
Sbjct: 671 DSITYGSLV-------YALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQT 723
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD---KVNGFLEKIEEEGFDPDLVTY 278
+Q V EEM G P+ T+N L CK GD++ +++G + P++VTY
Sbjct: 724 EQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTY 783
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+ LI+ CK GR+++A L + M R+ +VLP+++TY + ++GLCK+ + EA +L +
Sbjct: 784 SVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Query: 337 VHRGL--SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
L SPD V+++TLI CK G+ E+ ++ +M+ G P+ T +++ G K
Sbjct: 844 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTD 903
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
++ A ++ + GV+ Y L+ A C+ + A LL + G P++ +N
Sbjct: 904 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFN 963
Query: 455 ELMESLCKCDSVADALLLKDEM-VDRNIKPSLSTYRALI--------------------- 492
+++ LCK D +A + D+M + + P TY LI
Sbjct: 964 SIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD 1023
Query: 493 -------CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
CC G+ + G+ + MLE ++PD +LI G C + +A AL
Sbjct: 1024 PDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEE 1083
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
K D ++ A+ + + G + ++
Sbjct: 1084 MVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 184/407 (45%), Gaps = 39/407 (9%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN-ILTHVFCKNGDVDK 258
GF+ +I S N LN L+K + ++ PN T++ +L + GDV++
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI-MYRRNVLPDLVTYTTLM 317
GF +I + YN ++ S C+ G A ++R M R V P +VTY T++
Sbjct: 166 TLGFFRRIRSSSRS--VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 223
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
NGLCK ++ +LF +V RG PD+V+YNTLI + CK G ++E++ L +M
Sbjct: 224 NGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCV 283
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ T +++ G K GR+ A L+ E+ R +
Sbjct: 284 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV------------------------ 319
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK--PSLSTYRALICCF 495
+P++ YN ++ LCK A+A L + D +++ P T+ LI
Sbjct: 320 ---------LPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 370
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G+ EA S+ D+M+ G +P+ L+NG C + +A A++ K D
Sbjct: 371 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 430
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+Y+ + + F + + + +EL G PN +T +I L K
Sbjct: 431 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 477
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 115/287 (40%), Gaps = 67/287 (23%)
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
M CEL+ ++D S+ V D ++ + + K G E+ F + G+ P++
Sbjct: 833 MAEACELMRSLRD--GSLRVSPDTVTFSTLID-GLCKCGQTDEACNVFDDMIAGGYVPNV 889
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
V+ N L+NGL K + +++ + E M G+ P+ T+++L FCK VD+ L
Sbjct: 890 VTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHG 949
Query: 266 IEEEG---------------------------FD---------PDLVTYNTLISSYCKKG 289
+ G FD PD +TY TLI + G
Sbjct: 950 MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009
Query: 290 ----------------------------RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+L D M ++PD VT+ L+ G C
Sbjct: 1010 WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGAC 1069
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
K G +A LF MV + L PD++++ LI CK G+++ + ++
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 205/425 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+++ G I + + K ++ G P+ V+ N L+NG K+ ++ ++ G P
Sbjct: 241 GFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEP 300
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N H C+NG V ++ + +EG DPD+ TYNT+I+ K G L++A +
Sbjct: 301 DQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIV 360
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R LPD T+ TL+ L + ++ EA L + +GLSPD+ ++N LI A CK
Sbjct: 361 NQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKV 420
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G L EM +G PD T I++ G+L +AL+L+ E++ G S Y
Sbjct: 421 GDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTY 480
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I ALC+ R A + +++ G S +N L++ LCK + DA L ++MV
Sbjct: 481 NTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 540
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P+ TY +++ +C G +A +++ M +G D LING C
Sbjct: 541 EGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 600
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A LL K ++YN V +L + L + +G P+ LT K +
Sbjct: 601 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFR 660
Query: 599 SLWKG 603
SL +G
Sbjct: 661 SLCRG 665
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 198/410 (48%), Gaps = 14/410 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF--QDLISCTEDCNWAY 180
+P Y VH L N S A+K++ +L+ H DVF +I+C
Sbjct: 299 EPDQVTYNTFVHGLCQNGHVSHALKVM----DLMLQEGHDPDVFTYNTVINCLS------ 348
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + E+ + +D G P + N L+ L N +++ + E+ G+ P+
Sbjct: 349 -KNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+TFNIL + CK GD E+++ G PD VTYN LI C G+L +A L
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M VTY T+++ LCK+ ++ EA ++F +M +G+S V++NTLI CK +
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L+ +M+ G+ P+ T I+ Y K+G + A +++ + G I Y
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ R A LL + G P+ + YN +++SL + +++ DAL L EM +
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647
Query: 481 IKPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P TY+ + C G G EA + EM+ G +P+ R+L G
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 697
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 221/542 (40%), Gaps = 47/542 (8%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR QSD +AL N + P+S+ Y IV L F ++ LV ++
Sbjct: 63 LREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFD----LMEGLVREMRRE 118
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD---VGFQPSIVSCNFLLNGLL 216
H V +Y ++ ++ LD G Q V N LLN L+
Sbjct: 119 GHQVRAV-----VVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLV 173
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ + + VY EM GI P+ T N L C+ V LE++ G PD
Sbjct: 174 EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDET 233
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T+ TL+ + ++G + A + M P VT L+NG CK G+V +A +
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293
Query: 337 VHRGLSPDIVSYNTLIFAYC-----------------------------------KEGKM 361
+ G PD V+YNT + C K G++
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+K ++ +M+ G PDT T ++ + RL AL+L EL G+S ++ L
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+ P L E + G P YN L++ LC + +AL L +EM
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGC 473
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
S TY +I C R EA + D+M G+ + LI+G C K ++ A
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L+ K+ + +YN++ + + G++ K ++ + GF + +T +I+ L
Sbjct: 534 LIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLC 593
Query: 602 KG 603
K
Sbjct: 594 KA 595
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 193/411 (46%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+G + ++ ++ + GF+P V+ N ++GL + + +V + M + G P
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + + KNG++D+ G + ++ + G PD T+NTLI + + RL +A L
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + + + PD+ T+ L+N LCK G +LF M G +PD V+YN LI C
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ + LL EM NG T T I+ K+ R+ A + ++ G+S S +
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC+ R AT L+E++ ++G P+ YN ++ CK ++ A + + M
Sbjct: 516 NTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + TY LI C GR+ A+ L+ M G+ P + +I ++
Sbjct: 576 NGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRD 635
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAP 588
A L + + D +Y VF G + + + + GF P
Sbjct: 636 ALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMP 686
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 148/338 (43%), Gaps = 10/338 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P ++ + ++ L+ N+ A+ + EL VK V F LI+ A KV
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELT--VKGLSPDVYTFNILIN-------ALCKV 420
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F + G P V+ N L++ L + + + EM G +T T+
Sbjct: 421 GDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTY 480
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK +++ ++++ +G VT+NTLI CK R++DA L M +
Sbjct: 481 NTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVK 540
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P+ +TY +++ CK+G +++A + M G D+V+Y TLI CK G+ Q
Sbjct: 541 EGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQV 600
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M GI P ++Q + L ALNL E+ G Y +
Sbjct: 601 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFR 660
Query: 424 ALCQDNRPFA-ATSLLERIGQDGYVPSLEIYNELMESL 460
+LC+ P A L + G++P + L E L
Sbjct: 661 SLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL 698
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 210/430 (48%), Gaps = 13/430 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY-- 180
+ T+ +YC++VHIL + + A +L ELV P S DVF+ L + C +
Sbjct: 6 RHTTESYCILVHILFYARMYFHANNILKELVLSSWVLPGS-DVFEILWTTRNVCVPGFGV 64
Query: 181 --------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
V++G++ + + F + P SCN L+ L K D + +M
Sbjct: 65 FDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMV 124
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
GI P T+NI+ CK GD+ E++++ G PD+VTYNTLI Y K G L+
Sbjct: 125 GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLD 184
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
++ L+ M PD++TY L+N CK + A + F M + L P+++SY+TLI
Sbjct: 185 ESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLI 244
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
A CKEG MQ + +M G+ P+ FT ++ K G L A L E+ + V
Sbjct: 245 DALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVD 304
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
++ Y L+ LC++ A L +G+ G P+L+ Y L+ K S+ A+ L
Sbjct: 305 LNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMEL 364
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+EM +++IKP + + ++ C + E +M EM ESG+ + I L++ Y
Sbjct: 365 FNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYF- 423
Query: 533 EKDVNKAEAL 542
K N+ EA+
Sbjct: 424 -KAGNRTEAI 432
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 204/447 (45%), Gaps = 35/447 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+GL+ ES F + +G +P +++ N L+N K + + ++ + EM + P
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKP 235
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +++ L CK G + F + G P+ TY++LI + CK G L +AF L
Sbjct: 236 NVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLA 295
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS---------------- 342
M + +V ++VTYTTL++GLC+EG + EA +LF M G++
Sbjct: 296 DEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV 355
Query: 343 -------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
PDI+ + T+++ C E K++E K ++ EM +GI +
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ Y K G A+NL+ E++ G ++ + LI LC+ A R+
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P++ +Y L++ LCK + + DA L DEM D+N+ P Y A+I G E
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+++ ++M+E G+ D L+ G V +A L K I D +
Sbjct: 536 ALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLR 595
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNN 590
E G++ + +ELQ + G N
Sbjct: 596 KHYELGNIDEAIELQNELVEKGLIHGN 622
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 204/420 (48%), Gaps = 37/420 (8%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++R +F+ FR+ D +P+++S + L++ L K + + + +M R+G+ PN T+
Sbjct: 217 GMLR-AFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTY 275
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L CK G++ + +++ +E D ++VTY TL+ C++G +N+A L+R M +
Sbjct: 276 SSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGK 335
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V P+L YT L++G K + +A +LF+ M + + PDI+ + T+++ C E K++E
Sbjct: 336 AGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEE 395
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
K ++ EM +GI + ++ Y K G A+NL+ E++ G ++ + LI
Sbjct: 396 CKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALID 455
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ A R+ P++ +Y L++ LCK + + DA L DEM D+N+ P
Sbjct: 456 GLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIP 515
Query: 484 S-----------------------------------LSTYRALICCFCGIGRSGEAVSLM 508
L Y +L+ G+ +A +
Sbjct: 516 DKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFL 575
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM+ G++PD +C L+ + ++++A L +K I+ S AV N+ D
Sbjct: 576 AEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLIHGN-SNPAVPNIQTRD 634
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 212/432 (49%), Gaps = 8/432 (1%)
Query: 162 SVDVFQDLISC-------TEDCNWAYV-KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
S D F+D++ T + +V K G + + F + +G P IV+ N L++
Sbjct: 116 SRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
G K+ +D+ ++EEM +G P+ T+N L + FCK + + F +++++ P
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKP 235
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
++++Y+TLI + CK+G + A + M R +LP+ TY++L++ CK G + EA L
Sbjct: 236 NVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLA 295
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M+ + +IV+Y TL+ C+EG M E++ L M G+ P+ ++ G+ K
Sbjct: 296 DEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKV 355
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A+ L E++ + ++ ++ LC +++ ++ + + G + IY
Sbjct: 356 RSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
LM++ K + +A+ L +EM D + ++ T+ ALI C G EA+ M +
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ P+ + LI+G C + A+ L K I D +Y A+ + + G+ +
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535
Query: 574 LMELQKRFLRLG 585
+ ++ + + +G
Sbjct: 536 ALNMRNKMMEMG 547
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 168/410 (40%), Gaps = 45/410 (10%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+ A FF +K D ++KP +Y ++ L A+K ++ V P+ +
Sbjct: 219 LRAFEFFREMK-DKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTR-VGLLPNEF-TY 275
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI A K G + E+F + L +IV+ LL+GL + +++ +
Sbjct: 276 SSLID-------ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL----------- 275
++ MG+ G+ PN + L H K +DK ++ E+ PD+
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388
Query: 276 ------------------------VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
V Y TL+ +Y K G +A L M +V
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
T+ L++GLCK G V+EA F RM L P++ Y LI CK + ++K L EM
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ PD ++ G K G ALN+ ++ G+ + Y L+ L Q +
Sbjct: 509 QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQV 568
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A L + G +P + L+ + ++ +A+ L++E+V++ +
Sbjct: 569 QQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 157/581 (27%), Positives = 264/581 (45%), Gaps = 51/581 (8%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDL---KPLL------------PHLGAHEISRV------- 98
+++ I S H LL++D KPLL PHLG +++
Sbjct: 112 LLNFISSDHPHHSLHAHLLRSDHTIPKPLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRP 171
Query: 99 -LLRC--------QSDSVSALTFFNWVKND---LEIKPTSSNYCLIVHILAWNNKFSFAM 146
LL C +S+S +L F V D L ++P + + +++H +N A+
Sbjct: 172 NLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEAL 231
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
+++ ++ E CP +V L + + V+ L++ + G P+
Sbjct: 232 RLINQMGE-YGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK--------NSGLFPNRN 282
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L++G KL + + +V E M G+ P+ T+N + C G +D+ +K+
Sbjct: 283 TYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKM 342
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLND-AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
E PD+VTYNTLI C + R +D AF L M R V + VT+ ++ C EGK
Sbjct: 343 ESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGK 401
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA + +MV G SPD +YNT+I YCK GKM E+ ++ EM G+ DTFT
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ E +L A L ++ ++ G + Y LI+ +D + A L E + + G
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521
Query: 446 YVPSLEIYNELMESLC---KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
V ++ YN ++ LC K D D L +E++++ + P ST +I +C G
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKL---NELLEKGLVPDESTSNIIIHGYCWEGAVE 578
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++M+E + PD C +L+ G C E + K L + K + DT +YN +
Sbjct: 579 KAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIII 638
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ F ++ L +L P+ T ++ L K
Sbjct: 639 SSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKA 679
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 191/436 (43%), Gaps = 15/436 (3%)
Query: 124 PTSSNYCLIVH---ILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
P + Y ++VH L W +K E++EL+ DV+ C+
Sbjct: 279 PNRNTYNILVHGYCKLKW-------LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD--- 328
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G I E+ + K P +V+ N L++G + D +++ EEM G+ N
Sbjct: 329 --EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENG 386
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T NI+ FC G +D+ + + K+ E GF PD TYNT+I+ YCK G++ +A+ +
Sbjct: 387 VTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDE 446
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R+ + D T TL++ +C E ++ +A+ L + RG D V+Y TLI Y K+ +
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ L EM GI T I++G G+ A++ + EL G+ +
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I C + A ++ + P + N L+ LC+ + L L + + +
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
TY +I FC R +A LM EM + PD ++ G +AE
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAE 686
Query: 541 ALLGFFAKKFQIYDTE 556
L FA+K Q T+
Sbjct: 687 KLALKFAEKGQQVKTQ 702
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 46/377 (12%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ K ++ GF P + N ++NG K + + +++ +EMGR G+ +T T
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H C +D K + G+ D VTY TLI Y K + + A L+ M
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++ ++TY T++ GLC GK +A + ++ +GL PD + N +I YC EG +++
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG----------------------------- 394
+ +M+ + + PD FTC I+++G +EG
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIIS 639
Query: 395 ------RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY-- 446
RL A +L+ E++ + R Y+ ++ L + R A L + + G
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQV 699
Query: 447 -----VPSLE----IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
P L +Y+E + SLC DA+ L + + + + TY L+
Sbjct: 700 KTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759
Query: 498 IGRSGEAVSLMDEMLES 514
+S SL+ M+ +
Sbjct: 760 RRKSFTTTSLLPFMVSA 776
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
I T Y I+ L + K A+ L EL+E LV D S +
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIH-----------G 570
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y G + ++F+ K ++ +P I +CN LL GL + +++ ++ G +
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY- 298
T T+NI+ FCK ++ + ++E + +PD TYN +++ K GR +A L
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLAL 690
Query: 299 ------RIMYRRNVLPDLVT----YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+ + ++ P+L T Y+ ++ LC +GK ++A +LF + +G+S + +Y
Sbjct: 691 KFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGI 376
L+ K K + SLL M+ I
Sbjct: 751 IKLMDGLLKRRKSFTTTSLLPFMVSATI 778
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/433 (28%), Positives = 207/433 (47%), Gaps = 35/433 (8%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F K + +G QP+IV+ L+N L K+ Q +++++M G P+ +T+ + +
Sbjct: 152 AFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN 211
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR---- 304
CK G+ G L+K+EE G P++VTY+T+I S+ K R+N+A ++ M +
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP 271
Query: 305 -------------------------------NVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
N++PD+VT+ L++ +CKEGKV EA +
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M G+ PD+V+Y++L++ Y ++ E++ L M+ G PD F+ I++ GY K
Sbjct: 332 KTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKV 391
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
R+ A L E+ G++ + Y+ LI LCQ A +L + + +G +P+L Y
Sbjct: 392 KRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY 451
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L++ CK A L M KP+L Y LI C G +A L E+
Sbjct: 452 SILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFV 511
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ P++QI +ING C E +++A + D SYN + F D S+
Sbjct: 512 KGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESR 571
Query: 574 LMELQKRFLRLGF 586
++L GF
Sbjct: 572 AVQLIGEMRDKGF 584
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 212/436 (48%), Gaps = 11/436 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L ++PT + +++ L KF+ AM++ ++V + C V + +I+
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV--ARGCRPDVYTYTTIIN-------G 212
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K+G + +K + G QP++V+ + +++ K +++ ++ M GI P+
Sbjct: 213 LCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPD 272
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L C + + L ++ PD+VT+N L+ + CK+G++++A + +
Sbjct: 273 IFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLK 332
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M V PD+VTY++LM G +V EA +LF M+ +G PD+ SYN LI YCK
Sbjct: 333 TMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVK 392
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E+K L EM+ G+ P+ + ++ G + G L A NL + G + Y
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ C+ F L R Q Y P+L +YN L++++CK ++ DA L E+
Sbjct: 453 ILLDGFCKQGY-FGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFV 511
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ ++P+ Y +I C G EA+ M E G PD V+I G+ KD ++
Sbjct: 512 KGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESR 571
Query: 539 AEALLGFFAKKFQIYD 554
A L+G K I D
Sbjct: 572 AVQLIGEMRDKGFIAD 587
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 198/425 (46%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A VK+G ++ + K +++ G P+I + + L+N L +D + V ++ ++G+
Sbjct: 106 AIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQ 165
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P TF L + CK G + + + G PD+ TY T+I+ CK G A L
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M P++VTY+T+++ K+ +V EA +F M +G+SPDI +YN+LI C
Sbjct: 226 LKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ +E+ +LL EM I PD T ++V KEG++ A ++ + GV
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ + A L + + G P + YN L+ CK + +A L +EM+
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + P+ +Y LI C +G EA +L M +G LP+ +L++G+C +
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L + + YN + + + G+L +L G PN +I
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525
Query: 598 HSLWK 602
+ L K
Sbjct: 526 NGLCK 530
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 134/269 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + ++G +P +V+ + L+ G + + + ++++ M G P+
Sbjct: 320 KEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVF 379
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++NIL + +CK +D+ ++ +G P+ V+YNTLI C+ G L +A L++ M
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNM 439
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ LP+L TY+ L++G CK+G +A +LF M P++V YN LI A CK G +
Sbjct: 440 HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNL 499
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++++ L E+ G+ P+ I+ G KEG L AL ++ G Y+ +
Sbjct: 500 RDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVI 559
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSL 450
I A L+ + G++ +
Sbjct: 560 IRGFLHHKDESRAVQLIGEMRDKGFIADV 588
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 131/281 (46%), Gaps = 9/281 (3%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ VS ++ ++P Y +++ + ++ A K+ ++ K C
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI--TKGCKP 376
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V + LI+ Y KV I E+ + F + + G P+ VS N L++GL +L +
Sbjct: 377 DVFSYNILIN-------GYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ +++ M G PN T++IL FCK G K ++ P+LV YN L
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNIL 489
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I + CK G L DA L+ ++ + + P+ YTT++NGLCKEG + EA + F M G
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 549
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
PD +SYN +I + + L+ EM G D T
Sbjct: 550 PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 217/466 (46%), Gaps = 48/466 (10%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L ++ K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLC-THQMLLEAKSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 TILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G LN+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ P Y L+
Sbjct: 300 QAHDLIDEMSMKGLK-----------------------------------PDKFTYXTLI 324
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ CK + A + M+ NI+ Y ALI C GRS +A ++ EML G+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
PD + ++IN +C + DV K LL + + +YN + N
Sbjct: 385 PDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 155/362 (42%), Gaps = 7/362 (1%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ + LI++Y + G L DA YR+ +
Sbjct: 45 VVSRKGKGSASAVFATILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLW 104
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CK+G ++ ++S+
Sbjct: 105 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV Y LI LC+
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+++ A L + + G +P+ + L++ CK V A+ + +M+ + + P L T
Sbjct: 225 ESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLIT 284
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI G +A L+DEM G+ PD LI+G C E D++ A
Sbjct: 285 YNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS------LW 601
++ D +Y A+ + ++G ++ + L +G P++ T +I+ +W
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVW 404
Query: 602 KG 603
KG
Sbjct: 405 KG 406
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 208/432 (48%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L E+V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIEVVVSRKGKGSASAVFA 59
Query: 168 DLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 AVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM G
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHA 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 153/354 (43%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF 250
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ +P L YN L+ LCK + A L DEM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L DT +Y + N F + GD+ K +L K R G AP+ +T
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVT 424
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 1/422 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + + LD G + +V + ++ +K+ + + Q+Y+ M GI PN
Sbjct: 354 KAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVV 413
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ +IL FC+NG + + G +I + GF+P ++TY+ LI+ +CK G L D FYLY M
Sbjct: 414 SCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM 473
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ PD + Y+ L+NGLCK+G V +A + F + V+RGLSP++ + NTL+ ++C+ +
Sbjct: 474 IKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCI 533
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + Y M I DT T I+++G + GR+ AL L ++ + Y L
Sbjct: 534 VGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTL 593
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A + + + ++ P + IYN L+ + + AL L +V+R
Sbjct: 594 IDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGP 653
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP + T+ +ICC+C R +AV L +M + P++ +LI+ +C E ++ A
Sbjct: 654 KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAML 713
Query: 542 LLGFFAKKFQIYDTESYNA-VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ ++ + +Y+ + F + ++L L APN ++ +I L
Sbjct: 714 MFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGL 773
Query: 601 WK 602
K
Sbjct: 774 CK 775
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 242/540 (44%), Gaps = 21/540 (3%)
Query: 80 QNDLKPLLP----HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHI 135
Q + KPL P L + + V++ Q SA+ FF W ++ ++ ++C ++H+
Sbjct: 64 QQNPKPLNPILLSKLQLYHVPDVIISLQPKPFSAIRFFEWAESFFISPLSAPSFCALLHV 123
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESF---KT 192
L N FS A + + + + ++D F+D C D V G + ES+
Sbjct: 124 LLQNQLFSRAACVFDKFIMQFGNDYDTLDAFRDGF-CDLDSTNHSVVYGFLIESYCRKGM 182
Query: 193 FRKTLDVGFQPSI----VSCN---FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
F K++D+ + VS N LL L+ +C++ Y E+ +
Sbjct: 183 FDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFSVYEF 242
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + F G+V+ F + + + GF D++T N ++ + + A + ++ R
Sbjct: 243 VMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIG 302
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P++VT++TL++ CKEG + +A LF M G++PD++ Y+ LI K G++++ +
Sbjct: 303 PKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQ 362
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL + GI D + Y K G L + + + G+S + LI
Sbjct: 363 RLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGF 422
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
CQ+ R A L +I + G+ PS+ Y+ L+ CK ++ D L ++M+ + +P
Sbjct: 423 CQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDT 482
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK---DVNKAEAL 542
Y LI C G G+A+ + + G+ P+ L++ +C K K L
Sbjct: 483 IVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYL 542
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+G K DT +Y + A+ G + + + L + L+ F P+ +T +I L K
Sbjct: 543 MGMLNIK---ADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCK 599
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 197/412 (47%), Gaps = 1/412 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I E+ F + L +GF+PSI++ + L+ G K + + +YE+M + P
Sbjct: 421 GFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEP 480
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T +++L + CK G V F + G P++ T NTL+ S+C+ + A +Y
Sbjct: 481 DTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVY 540
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M N+ D VTYT L+ G + G+V EA LF +M+ + PD+++Y TLI CK
Sbjct: 541 YLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKL 600
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K + M N + PD +++ + +EG L +AL L V + G +
Sbjct: 601 KKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTF 660
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C R A L ++ + P+ + L+++ C+ + DA+L+ +M++
Sbjct: 661 NTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLE 720
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEA-VSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+P+L TY LI + E+ + L +EMLE+ + P+ +LI+G C +
Sbjct: 721 EGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMK 780
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+A K + D +Y + + + G L++ M L L P+
Sbjct: 781 EASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 173/346 (50%), Gaps = 1/346 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL+ ++ + F + ++ G P++ + N LL+ +L CI +VY MG + I +T
Sbjct: 494 KQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTV 553
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL + G VD+ ++ ++ F PD++TY TLI CK + + ++ M
Sbjct: 554 TYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFM 613
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ Y L+N +EG + A LF +V RG PD+ ++NT+I YC ++
Sbjct: 614 CKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRL 673
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L +M + P+ T I++ + +EGR+ A+ + ++ G + Y L
Sbjct: 674 DDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCL 733
Query: 422 IVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
I + + L + ++ P++ Y+ L++ LCK + +A +D++
Sbjct: 734 IHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKH 793
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ P + Y LI +C +GR EA+ L D ML + + PD + R L
Sbjct: 794 LLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 21/293 (7%)
Query: 91 GAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLC 150
GA + RV + + FF +K D KP YC ++ L K S LC
Sbjct: 561 GAAQFGRV-------DEALMLFFQMLKKDF--KPDVITYCTLIDGLCKLKKSSAG---LC 608
Query: 151 ELVELVKDC-PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
+ K+ + ++ LI+ + + G + + F ++ G +P + + N
Sbjct: 609 IFDFMCKNAVAPDIAIYNVLIN-------MHSREGHLEAALGLFVHVVERGPKPDVFTFN 661
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
++ +D Q++ +M + PN TF IL FC+ G +D K+ EE
Sbjct: 662 TMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721
Query: 270 GFDPDLVTYNTLISSYCK-KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G +P+LVTY+ LI Y K + + LY M N+ P++V+Y+ L++GLCK G ++E
Sbjct: 722 GPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKE 781
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
A F + + L PD+++Y LI YCK G++ E+ L M+ N + PD F
Sbjct: 782 ASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRF 834
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 207/432 (47%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + T +YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
+ T+ + AY++ G +R++ + +R T + F +C +L L+K
Sbjct: 60 AIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NG CKE K +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V + TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+
Sbjct: 300 QAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC DA + EM+ +KP TY +I FC G + L+ EM G +
Sbjct: 360 SGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 6/336 (1%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DJ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 71 DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI C++++ A L + + G VP+ +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 250
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V A+ + +M+ +++ P L TY LI C G +A L+DEM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 310
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD LI+G C E D++ A ++ D Y A+ + +G
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVD 370
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHS------LWKG 603
++ + L +G P+ T +I+ +WKG
Sbjct: 371 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 208/401 (51%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P ++CN L+N +L I + V+ ++ + G P+ TF IL C G+V K
Sbjct: 88 GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ +GF D V+Y TLI+ C+ G A L R + + V P++V Y+T+++
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+CK+ V +A L+ MV + +SPD+V+Y++LI +C GK++ + L M+ + I P+
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I++ G+ KEG++ A N++ + + V + Y+ L+ C + A SL
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q G P + Y+ ++ CK V +A+ L +EM + I P++ TY +L+ C G
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R+ A+ L+DEM + G + +++ C V+KA LL +K D +Y
Sbjct: 388 RTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYT 447
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ N + G L ++ + L G++PN T +I+
Sbjct: 448 VLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 222/438 (50%), Gaps = 1/438 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D I+C N + ++G I+ SF F K L G+ P V+ L+ GL + +
Sbjct: 92 DFITCNLLMN-CFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYF 150
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++++ G + ++ L + C+ G+ L +++ + P++V Y+T+I S CK
Sbjct: 151 HDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCK 210
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+NDAF LY M + + PD+VTY++L++G C GK++ A LF+RM+ ++P++ +
Sbjct: 211 DKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYT 270
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
++ LI +CKEGK++E+K++L MM + D T ++ GY ++ A +L +
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ GV+ Y +I C+ A L E + P++ YN L++ LCK +
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS 390
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
AL L DEM DR ++ TY +++ C +A+ L+ ++ E G+ PD VLI
Sbjct: 391 CALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLI 450
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
NG C ++ A+ + K + +Y ++ N F G + + + + G
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI 510
Query: 588 PNNLTCKYMIHSLWKGME 605
PN +T + +IHSL++ E
Sbjct: 511 PNAITYEILIHSLFEKDE 528
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 196/363 (53%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+VG + + + R+ +P++V + +++ + K ++ + +Y EM I P+
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L FC G + ++ + +P++ T++ LI +CK+G++ +A + +M
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++NV D+VTY +LM+G C +V +A LF+ M RG++PD+ SY+ +I +CK +
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L EM I+P+ T +V G K GR AL LV E+ G + Y+ +
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ A+C++N A LL +I + G P + Y L+ LCK + DA + ++++ +
Sbjct: 415 LDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGY 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAE 540
P++ TY +LI FC G E ++++ +M ++G +P++ +LI+ EKD N KAE
Sbjct: 475 SPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSL-FEKDENDKAE 533
Query: 541 ALL 543
LL
Sbjct: 534 KLL 536
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 9/360 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y I+ + + + A + CE+V K V + LIS +
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS--KRISPDVVTYSSLIS-------GFC 244
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
VG ++ + F + + P++ + + L++G K + + V M + + +
Sbjct: 245 VVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVV 304
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L +C V+K + + G PD+ +Y+ +I+ +CK +++A L+ M
Sbjct: 305 TYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + + P++VTY +L++GLCK G+ A +L M RG +I++YN+++ A CK +
Sbjct: 365 HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHV 424
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL ++ GI PD FT +++ G K GRL A + +L G S + Y L
Sbjct: 425 DKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSL 484
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C ++L ++ +G +P+ Y L+ SL + D A L EM+ R +
Sbjct: 485 INGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 152/304 (50%)
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R++++ N +P + + ++ L K + + A L +M G+ PD ++ N L+ + +
Sbjct: 47 RLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQL 106
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ S S+ +++ G +PD T I+++G +G + AL ++ G + + Y
Sbjct: 107 GHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSY 166
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ AA LL R+ P++ +Y+ +++S+CK V DA L EMV
Sbjct: 167 GTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVS 226
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ I P + TY +LI FC +G+ AV L + M+ + P+ +LI+G+C E V +
Sbjct: 227 KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVRE 286
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ +L KK D +YN++ + + ++K L + G P+ + MI+
Sbjct: 287 AKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMIN 346
Query: 599 SLWK 602
K
Sbjct: 347 GFCK 350
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 193/424 (45%), Gaps = 47/424 (11%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + F + G P +C LL L + +V+ EMGR G+ NTH +N +
Sbjct: 129 DAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAML 188
Query: 248 HVFCKNGDVDKVNGFL-----------------------------------EKIEEEGFD 272
HV K D + G + E++++EG +
Sbjct: 189 HVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVE 248
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+VT+NT+I CK+GR+ +A L M V PD VTYTTL++G C+ G V EA +L
Sbjct: 249 PDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKL 308
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M G+ P + +YN +I C++GKM+E LL EM G + D TC ++ Y K
Sbjct: 309 REEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAK 368
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR-PFAATSLLERIGQDGYVPSLE 451
G + SA + + G+ + + Y LI C+ A +L E +G+ G+ P+
Sbjct: 369 RGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGR-GFSPNYS 427
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+++ L++ CK ++ LL+ DE++ R + P S YR+LI C G A ++ +M
Sbjct: 428 VFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQM 487
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN----------AV 561
G+ D + L + V A +L A+K + YN A
Sbjct: 488 QGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEMARKQMSVTPQIYNCLCTSYGDEKAT 547
Query: 562 FNMF 565
NMF
Sbjct: 548 LNMF 551
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%)
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P + ++ L + +A ++F +M RGL+PD + L+ A + + +
Sbjct: 109 PHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKV 168
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM G+ +T ++ K L A L+ + GV + R ++ +I +
Sbjct: 169 FNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVR 228
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A + ER+ +G P + +N ++ LCK + +A L+ +M+ ++P T
Sbjct: 229 KGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVT 288
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L+ +C IG GEAV L +EM GM+P +I C + + + LL
Sbjct: 289 YTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMD 348
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ D + N + N +A+ GD++ +++KR + G + T K +IH K E
Sbjct: 349 GRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKE 406
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%)
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+P + ++ L S+ R +DA ++ M R + PD T L+ L + AH+
Sbjct: 108 EPHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHK 167
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+F+ M G++ + YN ++ K ++ L+ M G+ D F+ ++ Y
Sbjct: 168 VFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYV 227
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
++G A+ + +Q GV ++ +I LC++ R A L + P
Sbjct: 228 RKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTV 287
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y L++ C+ V +A+ L++EM + P ++TY A+I C G+ E L+ EM
Sbjct: 288 TYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEM 347
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ D C LIN Y D+ A + + D +Y A+ + F + +L
Sbjct: 348 DGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKEL 407
Query: 572 SKLMELQKRFLRLGFAPN 589
+ E + GF+PN
Sbjct: 408 DEAKEALFEMMGRGFSPN 425
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 2/340 (0%)
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ G PD L+++ + A ++ M R V + Y +++ K
Sbjct: 135 DQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRAGVAMNTHVYNAMLHVCLKA 194
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
A L RM G+ D S+NT+I Y ++G E+ + M G+ PD T
Sbjct: 195 RDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTW 254
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G KEGR+ A L ++ V Y L+ C+ A L E +
Sbjct: 255 NTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEA 314
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G VP + YN ++ LC+ + + L EM R ++ T LI + G
Sbjct: 315 GGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTS 374
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAVF 562
A + M+ESG+ D + LI+G+C K++++A EAL + F + ++ +
Sbjct: 375 ACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSP-NYSVFSWLV 433
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + + ++ + ++ G P+ + +I L K
Sbjct: 434 DGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCK 473
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 211/432 (48%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 TILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + M+ + PD T ++ G K+G L
Sbjct: 240 VKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A L+ E+ G+ + Y LI C++ A +R+ Q Y L+
Sbjct: 300 QAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP + TY +I FC G + L+ EM +G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 158/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 45 VVSRKGKGSASAVFATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLW 104
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 105 VPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M+ +G+ PD +T +++ G K
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + + + +P L
Sbjct: 225 ESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLIT 284
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM + +KP TY LI C G A M+
Sbjct: 285 YNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMI 344
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L D +Y + N F + GD+
Sbjct: 345 QGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVW 404
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G P+ +T
Sbjct: 405 KGSKLLKEMQRNGHVPSVVT 424
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 249/518 (48%), Gaps = 11/518 (2%)
Query: 82 DLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK 141
D + +P ++ + VL R ++ + + +D E+ + N ++VH +
Sbjct: 115 DHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLN--IMVHSYCKTLE 172
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
F A ++ E+ K C VF D+++ + A + G + + + G
Sbjct: 173 FDGADTVISEME---KRC-----VFPDVVTHNVLID-ARFRAGDVDAAIALVDSMANRGL 223
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P IV+ N +L GL K D+ +V+ M + + P+ +FNIL FC+ G+V +
Sbjct: 224 KPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVK 283
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
F ++++ PD+V+++ LI + ++G ++ A R M ++PD V YT ++ G C
Sbjct: 284 FYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFC 343
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+ G + EA ++ MV G PD+V+YNTL+ CK+ ++ +++ LL EM G+ PD
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLC 403
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ GY ++G +AL L L R + Y+ LI +C+ A L + +
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+P+ Y+ L++S C+ V DA DEMV + P++ TY ++I +C G
Sbjct: 464 HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNV 523
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+ + +M + + PD LI+GY E++++ A + K+ D +YN +
Sbjct: 524 KKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMI 583
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
N F+E G++ + K G P+ T +I+
Sbjct: 584 INGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLING 621
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 204/412 (49%)
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ +R L + + + N +++ K D V EM + + P+ T N+L
Sbjct: 143 EAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDAR 202
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+ GDVD ++ + G P +VTYN+++ CK R + A ++R M + +V PD+
Sbjct: 203 FRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDV 262
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
++ L+ G C+ G+V+EA + + M HR ++PD+VS++ LI + + G+M + + L E
Sbjct: 263 RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE 322
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G G+ PD +++ G+ + G + AL + E+ FG Y+ L+ LC+ +R
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A LL + + G P L + L+ C+ + +AL L D ++ + ++P + TY +
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C G +A L D+M +LP+ +LI+ +C + V A L KK
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +YN++ + G++ K + ++ + P+ +T +IH K
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIK 554
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 230/498 (46%), Gaps = 24/498 (4%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKN 118
N +V C +L+ + + + + + + P + H + + R ++ V A
Sbjct: 161 NIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL-IDARFRAGDVDAAIALVDSMA 219
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDC 176
+ +KP Y ++ L + +F A E+ + C + DV F LI
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAK----EVFRTMDQCSVAPDVRSFNILIG----- 270
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ +VG ++E+ K +++ P +VS + L+ + +D EM +G+
Sbjct: 271 --GFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ + ++ FC+ G + + +++ G PD+VTYNTL++ CK+ RL DA
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M R V PDL T+TTL++G C++G A QLF ++ + L PD+V+YN+LI C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
++G + ++ L +M I P+ T I++ + ++G++ A + E+ + G +
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ +I C+ L+++ QD P L +N L+ K +++ A + + M
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM 568
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
++P TY +I F G +A + M +SG+ PD LING+ +
Sbjct: 569 EKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNS 628
Query: 537 NKAEALLGFFAKKFQIYD 554
+A FQ++D
Sbjct: 629 KQA----------FQLHD 636
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 165/343 (48%), Gaps = 35/343 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + E+ + + + G P +V+ N LLNGL K + + ++ EM G+ P
Sbjct: 341 GFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF L H +C+ G+ + + + + PD+VTYN+LI C+KG L A L+
Sbjct: 401 DLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELW 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R +LP+ +TY+ L++ C++G+V +A MV +G P+I +YN++I YC+
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G +++ + L +M + ++PD T ++ GY KE + A N+ +++ V
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV------- 573
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
RP A T YN ++ + ++ DA + M D
Sbjct: 574 -----------RPDAVT-----------------YNMIINGFSEQGNMQDAGRVFKGMGD 605
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
I+P TY +LI G S +A L DEM+ G PD +
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 142/331 (42%), Gaps = 8/331 (2%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ LI +Y + + +AF +R++ V L+ L + G A +
Sbjct: 85 PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEA 144
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ ++ + + N ++ +YCK + + +++ EM ++PD T +++ +
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + +A+ LV + G+ Y+ ++ LC+ R A + + Q P +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+ C+ V +A+ EM R + P + ++ LI F G A + + EM
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKA----EALLGFFAKKFQIYDTESYNAVFNMFAED 568
G++PD I ++I G+C +++A + ++GF + D +YN + N +
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC----LPDVVTYNTLLNGLCKQ 380
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L +L G P+ T +IH
Sbjct: 381 HRLLDAEKLLNEMEERGVTPDLCTFTTLIHG 411
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 224/441 (50%), Gaps = 9/441 (2%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI+C + ++G SF F L G++P+ ++ L+ GL I Q
Sbjct: 94 FNILINC-------FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQAL 146
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++++ +G N + L + CK G L +++ + P++V YNT+I S
Sbjct: 147 HFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 206
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK +N+AF LY M + + PD+VTY+ L++G C GK+ +A LF++M+ ++PD+
Sbjct: 207 CKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDV 266
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+++ L+ +CKEG+++E+K++L MM GI PD T ++ GY ++ A ++
Sbjct: 267 YTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT 326
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + GV+ + Y+ +I C+ + A +L + + +P + YN L++ LCK
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
++ AL L DEM DR + TY +++ C + +A++L+ +M + G+ PD +
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 526 LINGYCMEKDVNKAEALL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LI+G C + A+ + K + I +Y + F ++ K + L +
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNI-TVYTYTVMIQGFCDNDLFDKALALLSKMEDN 505
Query: 585 GFAPNNLTCKYMIHSLWKGME 605
G PN T + +I SL++ E
Sbjct: 506 GCIPNAKTYEIIILSLFEKDE 526
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 201/363 (55%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + + R+ QP++V N +++ + K+ +++ + +Y EM GI P+
Sbjct: 173 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L FC G ++ G K+ E +PD+ T++ L+ +CK+GR+ +A + +M
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + PD+VTY +LM+G C +V +A +F+ M G++ ++ SYN +I +CK K+
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM I PD T ++ G K G++ AL LV E+ GV + Y+ +
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC++++ A +LL ++ +G P + Y L++ LCK + DA + ++++ +
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGY 472
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK-AE 540
++ TY +I FC +A++L+ +M ++G +P+++ ++I EKD N AE
Sbjct: 473 NITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILS-LFEKDENDMAE 531
Query: 541 ALL 543
LL
Sbjct: 532 KLL 534
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 4/418 (0%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
+F + L++ P I +L L+K+NC ++ EM GI + TFNIL + F
Sbjct: 43 SFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFS 102
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+ G I ++G++P+ +T TLI C KG+++ A + + + + V
Sbjct: 103 QLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKV 162
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
Y TL+NGLCK G+ A QL R+ + + P++V YNT+I + CK + E+ L EM
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 222
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDN 429
+ GI PD T ++ G+ G+L A+ L ++ I+ D+Y + L+ C++
Sbjct: 223 VSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM--ISEEINPDVYTFSILVDGFCKEG 280
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
R A ++L + + G P + Y LM+ C V A + + M + ++ +Y
Sbjct: 281 RVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYN 340
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+I FC I + EA++L EM ++PD LI+G C ++ A L+ +
Sbjct: 341 IMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDR 400
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+D +YN++ + ++ + K + L + G P+ T +I L KG K
Sbjct: 401 GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLK 458
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 140/267 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G ++E+ + G +P +V+ L++G + +++ ++ M + G+
Sbjct: 275 GFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTA 334
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++NI+ + FCK VD+ +++ + PD+VTYN+LI CK G+++ A L
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLV 394
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R V D +TY ++++ LCK +V +A L +M G+ PD+ +Y LI CK
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKG 454
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++++++++ +++ G +T +++QG+ AL L+ +++ G + Y
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTY 514
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDG 445
+ +I++L + + A LL + G
Sbjct: 515 EIIILSLFEKDENDMAEKLLREMIARG 541
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+ + E+ F++ P +V+ N L++GL K I ++ +EM G+
Sbjct: 345 GFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPH 404
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + CKN VDK L K+++EG PD+ TY LI CK GRL DA ++
Sbjct: 405 DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIF 464
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + TYT ++ G C +A L +M G P+ +Y +I + ++
Sbjct: 465 EDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEK 524
Query: 359 GKMQESKSLLYEMMGNGI 376
+ ++ LL EM+ G+
Sbjct: 525 DENDMAEKLLREMIARGL 542
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 197/426 (46%), Gaps = 12/426 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ LL+GL + + + + +M PN TF L +
Sbjct: 133 ALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMN 192
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G + + L+++ E+G P +TY T++ CKKG A L R M +++
Sbjct: 193 GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++ LCK+G+ +A LF M +G+ PD+ +YN++I +C G+ +++ L
Sbjct: 253 PNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ + KEG+ A L E+ G+ + Y+ +I C+
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+R AA + + G P + + L++ C + D + L EM R + + T
Sbjct: 373 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI FC +G A+ L +M+ SG+ PD C L++G C + A +
Sbjct: 433 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 492
Query: 548 KKFQIYDTE-----------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K D +YN + +G + EL + G P+ +T M
Sbjct: 493 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 597 IHSLWK 602
I L K
Sbjct: 553 IDGLCK 558
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 234/506 (46%), Gaps = 22/506 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L ++ S A+ ++ E C +V F
Sbjct: 133 ALSTFGKITK-LGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT--CRPNVVTFTT 189
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G I E+ + ++ G QP+ ++ +++G+ K +
Sbjct: 190 LMN-------GLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLL 242
Query: 229 EEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M + I PN ++ + CK+G +++E+G PDL TYN++I +C
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCS 302
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR +DA L + M R + PD+VTY L+N KEGK EA +L+ M+ RG+ P+ ++
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 362
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN++I +CK+ ++ ++ + Y M G PD FT ++ GY R+ + L+ E+
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
R G+ + Y+ LI C AA L +++ G P + N L++ LC +
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482
Query: 468 DALLLKDEMVD-----------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
DAL + M ++P + TY LIC G+ EA L +EM G+
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+PD+ +I+G C + +++A + K + ++N + N + + G + +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L R G + + +I+ K
Sbjct: 603 LFCEMGRRGIVADAIIYITLIYGFRK 628
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 200/399 (50%), Gaps = 1/399 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V L+ ++++ D +Y++M R I + ++FNIL FC +
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALST 136
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + G PD+VT+ TL+ C + R+++A + M+ P++VT+TTLMNGLC+
Sbjct: 137 FGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG++ EA L RM+ GL P ++Y T++ CK+G + +LL +M + I P+
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVV 256
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ K+GR A NL E+Q G+ Y+ +IV C R A LL+ +
Sbjct: 257 IYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P + YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 376
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G PD LI+GYC K ++ LL ++ + +T +YN +
Sbjct: 377 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L ++ + G P+ +TC ++ L
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 211/452 (46%), Gaps = 20/452 (4%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D+VSAL ++ I P Y I+ L + + S A + E+ E
Sbjct: 232 KGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE-------- 283
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F DL + + G ++ + ++ L+ P +V+ N L+N +K
Sbjct: 284 KGIFPDLFT-YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T+N + FCK +D + +G PD+ T+ TLI
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M RR ++ + VTY TL++G C G + A L +M+ G+
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ NTL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 522
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + +G + P++
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 582
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ CK V D L L EM R I Y LI F +G A+ + EM
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G+ ++++ +A A+L
Sbjct: 643 ISSGVYPDTITIRNMLTGFWSKEELERAVAML 674
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 196/391 (50%), Gaps = 1/391 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +G ++ ++ ++ +M R P+ F L V + D V +K+E +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D+ ++N LI +C +L A + + + + PD+VT+TTL++GLC E +V EA
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
FH+M P++V++ TL+ C+EG++ E+ +LL MM +G+ P T IV G
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229
Query: 391 GKEGRLLSALNLVVELQRFGVSISR-DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K+G +SALNL+ +++ I IY +I +LC+D R A +L + + G P
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
L YN ++ C +DA L EM++R I P + TY ALI F G+ EA L D
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYD 349
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EML G++P++ +I+G+C + ++ AE + A K D ++ + + +
Sbjct: 350 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 409
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ MEL R G N +T +IH
Sbjct: 410 RIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 180/419 (42%), Gaps = 22/419 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+ +P + I+D +C + D+ + K + P L + S ++ C S S
Sbjct: 250 HIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN-SMIVGFCSSGRWSD 308
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
+ +I P Y +++ KF A ++ E+ L + + + +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITYNSM 366
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I + K + + F G P + + L++G ID ++
Sbjct: 367 ID-------GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM R G+ NT T+N L H FC GD++ +++ G PD+VT NTL+ C G
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479
Query: 290 RLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+L DA +++ M + V PD++TY L+ GL EGK EA +L+ M H
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 539
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD ++Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
L L E+ R G+ IY LI + A + + + G P ++ I N L
Sbjct: 600 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+CN LL+GL + ++++ M +
Sbjct: 443 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 502
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 503 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 562
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+ TL+NG CK G+V + +LF M RG+ D + Y TL
Sbjct: 563 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 622
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I+ + K G + + + EM+ +G+YPDT T + ++ G+ + L A+ ++ +LQ
Sbjct: 623 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 210/429 (48%), Gaps = 13/429 (3%)
Query: 113 FNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
F W+ + + + T +YC ++H L + S A K L ++V K + VF ++
Sbjct: 1 FTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAIL 59
Query: 171 SC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
T+ + AY++ G +R++ + +R T + +C +L L+KL
Sbjct: 60 ETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 119
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+YNT
Sbjct: 120 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 179
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L++ Y + G L++ F L M VLPD+ TY+ L+NGLCKE K+ +A++LF M+ +G
Sbjct: 180 LMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 239
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L P+ V++ TLI +CK G++ + + M+ + PD T ++ G K+G L A
Sbjct: 240 LIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 299
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+ L
Sbjct: 300 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGL 359
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C+ DA + EM+ +KP TY +I FC G + L+ EM +G P
Sbjct: 360 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSV 419
Query: 521 QICRVLING 529
VL+NG
Sbjct: 420 VTYNVLMNG 428
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 161/380 (42%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 42 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLW 101
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 102 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 161
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M+ +G+ PD +T +++ G K
Sbjct: 162 FDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCK 221
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + +R+ +P L
Sbjct: 222 ESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLIT 281
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM + +KP TY LI C G A M+
Sbjct: 282 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMI 341
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L DT +Y + N F + GD+
Sbjct: 342 QENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 401
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G AP+ +T
Sbjct: 402 KGSKLLKEMQRNGHAPSVVT 421
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 206/425 (48%), Gaps = 2/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + GL+ + + F G + + LL+GL + + V+ M G P
Sbjct: 116 GYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAP 175
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H + + H C G + L EGF+P++V YN LI YC G L A ++
Sbjct: 176 DPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVF 235
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P++ TYT L++G CK K+ A LF RMV GL P++V+Y LI C +
Sbjct: 236 ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSD 295
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ + LL M +G+ P+ +TC +++ K R+ A L+ L + G+ ++ +Y
Sbjct: 296 GQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVY 355
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R AA L++ + G+VP Y+ L++ LC+ +++A+L+ D+M++
Sbjct: 356 TSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMME 415
Query: 479 RNIKPSLSTYRALICCFCG-IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ ++PS TY +I +G G ++D+M+ +G+ PD + + YC E +
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSK-KILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AE ++ + +YNA+ +A G S+ K + G PN + ++
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534
Query: 598 HSLWK 602
L K
Sbjct: 535 RLLIK 539
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 206/465 (44%), Gaps = 58/465 (12%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
V C +V + +LIS + K + + F + +D G P++V+ L+ G
Sbjct: 240 VNGCSPNVRTYTELIS-------GFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQ 292
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+D +++ + M G+ PN T ++L CK+ V + L + ++G +
Sbjct: 293 CSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNE 352
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ Y +LI CK GR A L + + + +PD TY++L++GLC++ ++ EA +
Sbjct: 353 IVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDD 412
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ +G+ P V+Y +I +E SK +L +M+ GI PD FT I V+ Y EGR
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALC----------------------------- 426
+ A ++++ + GV + Y+ LI
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTV 532
Query: 427 ----------QDNRPFAATS------------LLERIGQDGYVPSLEIYNELMESLCKCD 464
+N P + S LLE + + ++IYN + SLC+ D
Sbjct: 533 LLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVD 592
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A +L EM N+ PS Y ++I C C + EA++ +D M++SG +P + R
Sbjct: 593 RLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYR 652
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+I+ C E + A+ + G K Y+ ++ + + + G
Sbjct: 653 HIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKG 697
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 162/367 (44%), Gaps = 35/367 (9%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + +C GD+ L + GF PD Y + + YC+ G L A L+
Sbjct: 71 NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R + TYT L++GLC G VREA +F M G +PD Y T++ C
Sbjct: 131 VLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGA 190
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ +E+++LL + M G P+ ++ GY G L A++
Sbjct: 191 GRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVD----------------- 233
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ER+ +G P++ Y EL+ CK + A++L MVD
Sbjct: 234 ------------------VFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P++ TY ALI C G+ A L+ M SG++P+ C VLI+ C + V +
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ LLG +K + Y ++ + + G + L + + GF P+ T +I
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395
Query: 599 SLWKGME 605
L + E
Sbjct: 396 GLCRQKE 402
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 152/357 (42%), Gaps = 16/357 (4%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + + + GF P + + L++GL + + + V ++M G+ P+
Sbjct: 364 KAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPV 423
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ I+ + D L+K+ G PD+ TY + SYC +GR+ DA ++ M
Sbjct: 424 TYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE--- 358
V P+LVTY L+ G G +A F MV G P+ SY L+ K+
Sbjct: 484 VDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESS 543
Query: 359 -------------GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+M+ LL EM+ + + + + RL A L++E
Sbjct: 544 NNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIE 603
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+Q ++ S D+Y +I C+ A + ++ + + GY+P LE Y ++ SLC+ S
Sbjct: 604 MQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGS 663
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ A + +M+ + +R LI G E SL+ M E P +
Sbjct: 664 IQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDAL 720
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 113/268 (42%), Gaps = 4/268 (1%)
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
RM R L +Y TLI AYC G + SK L ++ G PD+ V GY + G
Sbjct: 66 RMPARNLR----TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAG 121
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
L A L V + G + Y L+ LC A S+ + DG P +Y
Sbjct: 122 LLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYA 181
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
++ LC +A L + + +P++ Y ALI +C +G AV + + M +
Sbjct: 182 TMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVN 241
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G P+ + LI+G+C + +++A L + + +Y A+ DG L
Sbjct: 242 GCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCA 301
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + G PN TC +I +L K
Sbjct: 302 YRLLQSMENSGLVPNEWTCSVLIDALCK 329
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 68/155 (43%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L L +++ +D+ + EM + P+ + + C+ + + F++ + +
Sbjct: 582 NCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVK 641
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P L +Y +ISS C++G + A ++ M + + + + L++GL ++G V E
Sbjct: 642 SGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAE 701
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
L M + P Y L +QE
Sbjct: 702 CSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 193/403 (47%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+N L + + V ++ ++G P+ TFN L C G + +
Sbjct: 180 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 239
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K EGF PD+VTY TL++ CK G + A L R M ++N P+++ Y T+++
Sbjct: 240 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 299
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF M+ +G+SPDI +YN+LI A C + + +LL EM+ + I P+
Sbjct: 300 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 359
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG + A ++V + + GV Y L+ C + A + +
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 419
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G VP++ YN L+ C+ + A+ L ++M + + TY LI C +G
Sbjct: 420 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 479
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R A++L EM+ SG +PD R+L++ C + +A LL D YN
Sbjct: 480 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 539
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G+L +L G P+ T MIH L K
Sbjct: 540 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK 582
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 35/415 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ +F + L + PS V LL + K+ + +M GI P+ +T NIL
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC + L K+ + G PD T+NTLI C +G++ +A +L+
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+VTY TLMNGLCK G A +L MV + P++++YNT+I + CK+ ++ E+ +L
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ GI PD FT Y+ LI ALC
Sbjct: 313 FSEMITKGISPDIFT-----------------------------------YNSLIHALCN 337
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
T+LL + +P++ +++ ++++LCK +A A + D M+ R ++P + T
Sbjct: 338 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 397
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y AL+ C EAV + D M+ G +P+ + +LINGYC + ++KA LL +
Sbjct: 398 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 457
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ I DT +YN + + G L + L + G P+ +T + ++ L K
Sbjct: 458 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 219/491 (44%), Gaps = 14/491 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWA 179
I P ++++ + +A +L +L++L C F LI C E
Sbjct: 181 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL--GCQPDNTTFNTLIRGLCVE----- 233
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
G I E+ F KT+ GFQP +V+ L+NGL K+ ++ M + PN
Sbjct: 234 ----GKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPN 289
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+N + CK+ V + ++ +G PD+ TYN+LI + C L
Sbjct: 290 VIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLN 349
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M ++P++V ++T+++ LCKEG + AH + M+ RG+ PD+V+Y L+ +C
Sbjct: 350 EMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRS 409
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M E+ + M+ G P+ + I++ GY + R+ A+ L+ ++ G+ Y+
Sbjct: 410 EMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYN 469
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC R A +L + G +P L Y L++ LCK +A+A++L +
Sbjct: 470 TLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGS 529
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ + Y I C G A L + G+ PD + ++I+G C +++A
Sbjct: 530 NLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEA 589
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L + D YN + F + +L + L GF+ + T ++
Sbjct: 590 NKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEM 649
Query: 600 LW-KGMERKFQ 609
L G+++ F+
Sbjct: 650 LSDDGLDQSFE 660
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 139/299 (46%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M + P V +T L+ + K L +M G+ PD+ + N
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI ++C ++ + S+L +++ G PD T +++G EG++ AL+L + G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
Y L+ LC+ AA LL + Q P++ YN +++SLCK V +A
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM+ + I P + TY +LI C + +L++EM+ S ++P+ + +++
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C E + A ++ K+ D +Y A+ + ++ + +++ + G PN
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 429
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+++ DAL + M+ + PS + L+ + +SL +M G+ PD
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+LIN +C + + A ++L K D ++N + +G + + + L + +
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF P+ +T +++ L K
Sbjct: 249 EGFQPDVVTYGTLMNGLCK 267
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 213/467 (45%), Gaps = 37/467 (7%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP- 238
Y K G ++++ + D G PSI CN LL LL+ + + W+V E M GI P
Sbjct: 57 YKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPD 116
Query: 239 ----------------------------------NTHTFNILTHVFCKNGDVDKVNGFLE 264
NT T+N+L C++G V++ GF +
Sbjct: 117 VYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 176
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+E+ G PD TY LI+ CK R N+A L M + P++V Y L++G +EG
Sbjct: 177 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 236
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
EA ++ MV G+ P+ ++Y+ L+ CK G+M + LL +M+ + PDT T
Sbjct: 237 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 296
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+I++G+ + A L+ E++ G+S + Y +I LCQ P A+ LLE +
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P+ +Y L+ C+ +V+ A + D+M N+ P L Y +LI +GR E+
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 416
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+M E G+LP+ LI+GY D+ AE L+ + Y +
Sbjct: 417 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 476
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
+ + D+ K+ K L G +N +IH+L ME F+
Sbjct: 477 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 523
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/571 (24%), Positives = 259/571 (45%), Gaps = 84/571 (14%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+S +V F D + P Y +++ L + + + A +L E+ +
Sbjct: 163 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS--CAELKP 220
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V V+ +LI +++ G E+FK ++ + G QP+ ++ + L+ GL K+ +
Sbjct: 221 NVVVYANLID-------GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 273
Query: 222 DQC-----------------------------------WQVYEEMGRIGICPNTHTFNIL 246
D+ +++ EM GI PN +T++I+
Sbjct: 274 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIM 333
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
H C++G+ +K + LE++ +G P+ Y LIS YC++G ++ A ++ M + NV
Sbjct: 334 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 393
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
LPDL Y +L+ GL K G+V E+ + F +M RGL P+ +Y+ LI Y K G ++ ++
Sbjct: 394 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 453
Query: 367 LLYEMMGNGIYPD----------------------TFTCQ-------------IIVQGYG 391
L+ M+ G+ P+ TF I++
Sbjct: 454 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 513
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G + +A ++ E+++ G +Y LI LC+ A +L+ + + G P++
Sbjct: 514 SSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 573
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
YN L++ LCK ++ A + + ++ + + P+ TY +LI C +G A L +EM
Sbjct: 574 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 633
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLG--FFAKKFQIYDTESYNAVFNMFAEDG 569
L +G+ PD+ + VL G D+ +A L+ F I S+N + + F + G
Sbjct: 634 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASI---SSFNNLVDGFCKRG 690
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + ++L + G PN LT + +I L
Sbjct: 691 KMQETLKLLHVIMGRGLVPNALTIENIISGL 721
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 181/374 (48%), Gaps = 53/374 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K I + TF+ LD G L++ L ++ ++V E+ + G P
Sbjct: 476 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVP 535
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H ++ L CK D +K G L+++ ++G DP++V YN LI CK G ++ A ++
Sbjct: 536 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 595
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD-------------- 344
+ + ++P+ VTYT+L++G CK G + A L++ M+ G++PD
Sbjct: 596 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 655
Query: 345 --------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
I S+N L+ +CK GKMQE+ LL+ +MG G+ P+ T +
Sbjct: 656 GDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 715
Query: 385 IIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ G + G+L + VEL Q+ S +R +SL +
Sbjct: 716 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHF-----------------SSLFMDMIN 758
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G +P L++ ++++ CK ++ AL+L+D +V ++ S+Y A++ C G+ E
Sbjct: 759 QGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 817
Query: 504 AVSLMDEMLESGML 517
A++L+ EM + G L
Sbjct: 818 ALNLLKEMDKRGNL 831
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 185/408 (45%), Gaps = 20/408 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K G + + + ++ LD G +P+ V LL K + I++ ++ M G+
Sbjct: 441 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 500
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + IL H +G+++ L +IE+ G PD+ Y++LIS CK AF +
Sbjct: 501 DNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 560
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V P++V Y L++GLCK G + A +F+ ++ +GL P+ V+Y +LI CK
Sbjct: 561 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 620
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDI 417
G + + L EM+ GI PD F ++ G G L A+ L+ E+ R SIS
Sbjct: 621 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-- 678
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L+ C+ + LL I G VP+ ++ L + +++ + V
Sbjct: 679 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI---FV 735
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ K S S R SL +M+ G +P + +I +C E +++
Sbjct: 736 ELQQKTSESAARHF-------------SSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLD 781
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
KA L K SY A+ + G LS+ + L K + G
Sbjct: 782 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++L + K+G V + + + G P + N L+ + + + + M
Sbjct: 49 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFM 108
Query: 302 YRRNVLPDLVTYTTLMN-----------------------------------GLCKEGKV 326
+ PD+ TY+TL+ GLC+ G V
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA M GL PD +Y LI CK + E+K+LL EM + P+ +
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ +EG A ++ E+ GV ++ YD L+ LC+ + A+ LL+++ +D +
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P YN ++E + + DA L EM + I P++ TY +I C G +A
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L++EM G+ P++ + LI+GYC E +V+ A + K + D YN++ +
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G + + + + G PN T +IH K
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 444
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 1/172 (0%)
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
P S+ + G+ S + + L+++ K V DA + M DR + PS+ A
Sbjct: 29 PVVLASIHRALSDSGH-RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNA 87
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ + + M+ +G+ PD LI YC ++ + A+ +L ++
Sbjct: 88 LLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERG 147
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+T +YN + G + + +K G P+ T +I+ L K
Sbjct: 148 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCK 199
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 138/499 (27%), Positives = 221/499 (44%), Gaps = 47/499 (9%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQS--DSVSALTFFNWVKNDLEIKPTSSNYCLIVHIL 136
L LK +LP AH ++ + S L+FF+++ + T +YC +VH L
Sbjct: 61 LHISLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFL 120
Query: 137 AWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV---------KVGLIR 187
+ + + + L V K + VF ++ + ++V + G +
Sbjct: 121 IAH-RMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVS 179
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + FR T + C LL ++K++ + Y E+ G PN +TFN+L
Sbjct: 180 DAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLM 239
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK G V ++I + G P V++NTLI+ YCK G L + F L +M V
Sbjct: 240 NRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVF 299
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP------------------------ 343
PD+ TY+ L++GLCKE ++ +A+ LF M RGL P
Sbjct: 300 PDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEI 359
Query: 344 -----------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
D+V YNTLI CK G +E++ + EM G+ PD FT ++ G K
Sbjct: 360 YQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCK 419
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
EG L AL + E+ + G+ + + +I LC+D + A L + + G P
Sbjct: 420 EGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGT 479
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y +M+ CK V L EM P + TY L+ C G+ A L++ ML
Sbjct: 480 YTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAML 539
Query: 513 ESGMLPDSQICRVLINGYC 531
G++PD +L+ G+C
Sbjct: 540 NLGVVPDDITYNILLQGHC 558
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 103/253 (40%)
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L F ++GK S + G +F ++ Y + G + A+ ++
Sbjct: 133 LHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHN 192
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ I + L+ + + + P A I GY P++ +N LM LCK V DA
Sbjct: 193 LKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQ 252
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L+ DE+ ++P+ ++ LI +C G E L M E + PD LI+G
Sbjct: 253 LIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGL 312
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C E + A L + + + ++ + N ++G + +E+ ++ G +
Sbjct: 313 CKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADL 372
Query: 591 LTCKYMIHSLWKG 603
+ +I L KG
Sbjct: 373 VLYNTLIDGLCKG 385
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 209/438 (47%), Gaps = 25/438 (5%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKML----------------CE 151
+FF W+ + + + T +YC ++H L + FS A +L
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAA 60
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
++E + VF LI+ AY++ G +R++ + +R T + +C +
Sbjct: 61 ILETKGTQRSDIYVFSGLIT-------AYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 113
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
L L+KL W YEE+ G + + FNIL H FCK+GD+ + I + G
Sbjct: 114 LEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGL 173
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
P V+YNTL++ Y + G L++ F L M V PD+ TY+ L+NGL KE K+ +A +
Sbjct: 174 RPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADE 233
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
LF M+ +GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G
Sbjct: 234 LFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC 293
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K+G L A +L+ ++ R G+ + Y LI C++ +A +R+ Q+
Sbjct: 294 KKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDV 353
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+Y L+ LC+ DA + EM+ + P TY +I FC G + L+ EM
Sbjct: 354 VYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEM 413
Query: 512 LESGMLPDSQICRVLING 529
G +P VL+NG
Sbjct: 414 QRDGHVPSVVTYNVLMNG 431
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 163/385 (42%), Gaps = 36/385 (9%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++L V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 40 SLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR 99
Query: 303 R----------RNVLPDLVT-------------------------YTTLMNGLCKEGKVR 327
R VL L+ + LM+ CK+G +R
Sbjct: 100 EHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIR 159
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A +F + GL P VSYNTL+ Y + G + E L M+ +G+ PD +T +++
Sbjct: 160 VAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLI 219
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G KE ++ A L E+ G+ + + LI C++ R A + +++ +
Sbjct: 220 NGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 279
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN L+ LCK + A L D+M + +KP TY LI C G A
Sbjct: 280 PDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEH 339
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M++ + D + LI+G C E AE +L DT +Y + N F +
Sbjct: 340 RKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCK 399
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLT 592
GD+ K +L K R G P+ +T
Sbjct: 400 KGDVWKGSKLLKEMQRDGHVPSVVT 424
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 209/420 (49%), Gaps = 1/420 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ T G P V+ N LLN + + + + M + G+ P T+
Sbjct: 218 GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTY 277
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + + G + + +E + GF+PDL TYN L + C+ G++++AF L M R
Sbjct: 278 NTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMER 337
Query: 304 -RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+LPD+VTY TL + K +A +L M +G+ +V++N +I CK+G+++
Sbjct: 338 LGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L +M +G+ PD T ++ + K G + A L+ E+ R G+ + + ++
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC++ R A LL+ Q G++P Y +M + K + AL L DEM+++ +
Sbjct: 458 YNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLT 517
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
PS+STY LI +GR EA+ ++E++E G++PD ++I+ YC E D+ A
Sbjct: 518 PSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQF 577
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D + N + N +G L K ++L + ++ G + +T +I ++ K
Sbjct: 578 HNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCK 637
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 188/406 (46%), Gaps = 36/406 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-IC 237
AY ++G I+++ K GF+P + + N L GL + +D+ +++ +EM R+G +
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342
Query: 238 PNTHTFNIL------------------------------TH-----VFCKNGDVDKVNGF 262
P+ T+N L TH CK+G+++ G
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ ++G PD++TYNTLI ++CK G + A+ L M RR + D T T++ LCK
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E + EA L RG PD VSY T++ AY KE + + L EM+ + P T
Sbjct: 463 EKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIST 522
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++G + GRL A++ + EL G+ Y+ +I A C++ A ++
Sbjct: 523 YNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++ + P + N LM LC + AL L + V++ K + TY LI C G
Sbjct: 583 ENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVD 642
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
A+ +M G+ PD+ V+++ +A+ +L A+
Sbjct: 643 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 35/330 (10%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P VS ++ K + ++++EM + P+ T+N L + G + +
Sbjct: 480 GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEA 539
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ E+G PD TYN +I +YCK+G L +AF + M + PD+VT TLMNG
Sbjct: 540 IDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNG 599
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC GK+ +A +LF V +G D+++YNTLI CK+G + + +M G+ PD
Sbjct: 600 LCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
FT +++ + GR A N++ +L G ++S+ L+ +P
Sbjct: 660 AFTYNVVLSALSEAGRTEEAQNMLHKLAESG-TLSQSFSSPLL-------KP-------- 703
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
S+ + +S DA ++E V+ + Y L+ C G
Sbjct: 704 ------------------SSVDEAESGKDA-KTEEETVENPQDSASEAYTKLVNGLCTSG 744
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ EA +++DEM++ GM DS L+ G
Sbjct: 745 QFKEAKAILDEMMQKGMSVDSSTYITLMEG 774
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K + + + + ++ PSI + N L+ GL ++ + + E+ G+ P
Sbjct: 494 AYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVP 553
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ H +CK GD++ F K+ E F PD+VT NTL++ C G+L+ A L+
Sbjct: 554 DDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ D++TY TL+ +CK+G V A F M RGL PD +YN ++ A +
Sbjct: 614 ESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 673
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ +E++++L+++ +G +F+ ++ E E + + Y
Sbjct: 674 GRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAY 733
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
L+ LC + A ++L+ + Q G Y LME L K
Sbjct: 734 TKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A+++ E++E K S+ + LI ++G ++E+ + ++ G P
Sbjct: 504 ALRLWDEMIE--KKLTPSISTYNTLIK-------GLSRMGRLKEAIDKLNELMEKGLVPD 554
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ N +++ K ++ +Q + +M P+ T N L + C NG +DK E
Sbjct: 555 DTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFE 614
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
E+G D++TYNTLI + CK G ++ A + + M R + PD TY +++ L + G
Sbjct: 615 SWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAG 674
Query: 325 KVREAHQLFHRMVHRG----------LSPDIV-------------------------SYN 349
+ EA + H++ G L P V +Y
Sbjct: 675 RTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYT 734
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
L+ C G+ +E+K++L EMM G+ D+ T +++G K + L+
Sbjct: 735 KLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLT 783
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 48/277 (17%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNW 178
++ P+ S Y ++ L+ + A+ L EL+E LV D D ++I
Sbjct: 515 KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPD-----DTTYNIII------H 563
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G + +F+ K ++ F+P +V+CN L+NGL +D+ +++E G
Sbjct: 564 AYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKV 623
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L CK+GDVD F +E G PD TYN ++S+ + GR +A +
Sbjct: 624 DVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNML 683
Query: 299 RIMYRRNVL----------PDLV-------------------------TYTTLMNGLCKE 323
+ L P V YT L+NGLC
Sbjct: 684 HKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTS 743
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
G+ +EA + M+ +G+S D +Y TL+ K K
Sbjct: 744 GQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 191/362 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I +SF + + GF P++V L++G K I++ ++ EMG+ G+ N
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEW 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L H KNG + EK++E+G P+L TYN +++ +CK GR DAF L+ M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V ++VTY TL+ GLC+E K EA+++ +M G++P++++YNTLI +C GK+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ SL ++ G+ P T I+V G+ K+G A +V E++ G+ S+ Y L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTIL 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + + A L + + G P + Y+ L+ C + +A L MV + +
Sbjct: 415 IDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKL 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ Y ++ +C G S A+ L EM E + P+ R +I C E+ +AE
Sbjct: 475 EPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEG 534
Query: 542 LL 543
L+
Sbjct: 535 LV 536
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 36/447 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+ + S F + +D GF P N LL ++ + +Q W+ + E +I +
Sbjct: 103 AYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKVDL 161
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA---- 294
+ ++F I+ C+ G+++K L ++ E GF P++V Y TLI CK+G + A
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221
Query: 295 -------------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F +Y M V P+L TY +MN CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ ++A +LF M RG+S +IV+YNTLI C+E K E+ ++ +M +GI P+ T
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ G+L AL+L +L+ G+S S Y+ L+ C+ A +++ + +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PS Y L+++ + D++ A+ L+ M + + P + TY LI FC G+ E
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L M+ + P+ I ++ GYC E +A L +K + SY +
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ ++ + L ++ + G P++
Sbjct: 522 VLCKERKSKEAEGLVEKMIDTGIDPSD 548
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 141/275 (51%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G +++FK F + + G +IV+ N L+ GL + ++ +V ++M GI PN
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L FC G + K ++ G P LVTYN L+S +CKKG + A + +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + P +TYT L++ + + +A QL M GL+PD+ +Y+ LI +C +G
Sbjct: 398 EMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKG 457
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M E+ L M+ + P+ +V GY KEG AL L E++ + + Y
Sbjct: 458 QMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYR 517
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
Y+I LC++ + A L+E++ G PS I N
Sbjct: 518 YMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILN 552
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 120/237 (50%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K + G P++++ N L++G + + + + ++ G+ P+ T+NIL
Sbjct: 321 EANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILV 380
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FCK GD ++++EE G P +TY LI ++ + + A L M +
Sbjct: 381 SGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLT 440
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ TY+ L++G C +G++ EA +LF MV + L P+ V YNT++ YCKEG + L
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRL 500
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
EM + P+ + + +++ KE + A LV ++ G+ S I + + A
Sbjct: 501 FREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 129/350 (36%), Gaps = 92/350 (26%)
Query: 352 IFAYCKEGKMQESKSLLYEMMGN---------------------GIYP------------ 378
+ Y E + E+KS LYE+M N G P
Sbjct: 80 LLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFV 139
Query: 379 ----------------------DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
D ++ I+++G + G + + +L+VEL+ FG S +
Sbjct: 140 VGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVV 199
Query: 417 IYDYLIVALCQDNRPFAATSLL-----------------------------------ERI 441
IY LI C+ A L E++
Sbjct: 200 IYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM 259
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+DG P+L YN +M CK DA L DEM +R + ++ TY LI C ++
Sbjct: 260 QEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKA 319
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EA +MD+M G+ P+ LI+G+C + KA +L + +YN +
Sbjct: 320 NEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK--GMERKFQ 609
+ F + GD S ++ K G P+ +T +I + + ME+ Q
Sbjct: 380 VSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQ 429
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 198/402 (49%), Gaps = 1/402 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N +++G K + ++ EM R G+ P+ T+N++ CK +DK
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ G PD VTYN +I Y GRL +A ++R M R ++P++V + + LCK
Sbjct: 323 LRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCK 382
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ +EA ++F M +G PDIVSY TL+ Y EG + L M NGI D
Sbjct: 383 HGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ Y K G + A+ + E+Q+ GVS Y +I A + R A ++
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI-KPSLSTYRALICCFCGIGRS 501
G P+ +Y+ +++ C + A L EM+++ I +P + + ++I C GR
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A + D + + G PD LI+GYC+ ++KA +L D +Y+ +
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL 622
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++G ++ + L + R G PN +T M+ L++
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 226/458 (49%), Gaps = 14/458 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAY 180
KP +YC ++H A F+ + + + + DC VF LI AY
Sbjct: 402 KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADC----RVFNILI-------HAY 450
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G++ ++ F + G P +V+ + +++ ++ + + + +M GI PNT
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ + FC +G + K + ++ +G PD+V +N++I+S CK GR+ DA ++
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
++ PD++T+T+L++G C GK+ +A ++ M G+ DIV+Y+TL+ Y K G
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + +L EM G+ P+T T I++ G + GR ++A E+ G +++ IY
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC++N A L +++G S+ I N ++ ++ K +A L +
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ STY +I G +A ++ M +SG++P S++ +I + ++ KA
Sbjct: 751 GLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L K + + + + + ++F+ G + M+L
Sbjct: 811 GNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKL 848
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 212/487 (43%), Gaps = 45/487 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y ++H A + A KM ++ S + +++ C + K
Sbjct: 332 QPDTVTYNCMIHGYATLGRLKEAAKMFRKM--------KSRGLIPNIVICNSFL-ASLCK 382
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +E+ + F G +P IVS LL+G ++ M GI +
Sbjct: 383 HGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRV 442
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FNIL H + K G VD +++++G PD+VTY+T+IS++ + GRL DA + M
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKE--- 358
R + P+ Y +++ G C G + +A +L M+++G+ PDIV +N++I + CK+
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRV 562
Query: 359 --------------------------------GKMQESKSLLYEMMGNGIYPDTFTCQII 386
GKM ++ +L M G+ D T +
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTL 622
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K GR+ L L E+QR GV + Y ++ L + R AA + + G
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGT 682
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
++ IY ++ LC+ + +A++L ++ N+K S++ +I + R EA
Sbjct: 683 TVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKE 742
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L + SG+LP+ V+I + V A + K + + N + M
Sbjct: 743 LFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802
Query: 567 EDGDLSK 573
E G+++K
Sbjct: 803 EKGEIAK 809
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 135/561 (24%), Positives = 247/561 (44%), Gaps = 34/561 (6%)
Query: 14 NFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLI-------- 65
F++ LA ++ SSA I D +L+ L+N + Q ++V L
Sbjct: 114 GFLTALARATSSSAC-------ITDGP--ALALALFNRVCREQAGPRVVPLTVHTYSILM 164
Query: 66 --CSSLKKGDSHLTLLQNDLKPLLPHLGAHEIS-RVLLRC---QSDSVSALTFFNWVKND 119
C ++ D L L L+ L H+I+ LL+C + + A+ ++
Sbjct: 165 DCCCRARRPDLGLVLFGCILRT---GLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSE 221
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L P +Y +I+ L N+ A+ + + + C +V + +I
Sbjct: 222 LGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI-------HG 274
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G ++ F + G +P +V+ N +++ L K +D+ V +M G P+
Sbjct: 275 FFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T+N + H + G + + K++ G P++V N+ ++S CK GR +A ++
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + PD+V+Y TL++G EG + LF+ M G++ D +N LI AY K G
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ + EM G+ PD T ++ + + GRL A+ ++ G+ + +Y
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I C A L+ + G P + +N ++ SLCK V DA + D + D
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+P + T+ +LI +C +G+ +A ++D M G+ D L++GY +N
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634
Query: 539 AEALLGFFAKKFQIYDTESYN 559
L +K +T +Y
Sbjct: 635 GLTLFREMQRKGVKPNTVTYG 655
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 77/178 (43%), Gaps = 9/178 (5%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVG 184
T S Y +I+ L NN A+ + +L + + S+ + +I+ A KV
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTM--NVKFSITILNTMIN-------AMYKVQ 735
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
E+ + F G P+ + ++ LLK ++ ++ M + GI P + N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLN 795
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ + + G++ K +L K++ + + T + ++S + +KG+ ++ L Y
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLLPAKY 853
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 208/430 (48%), Gaps = 13/430 (3%)
Query: 112 FFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
FF W+ + + + T +YC ++H L + A K L ++V K + VF +
Sbjct: 1 FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAI 59
Query: 170 ISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
+ T+ + AY++ G +R++ + +R T + F+ +C +L L+KL
Sbjct: 60 LETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLK 119
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
W YEE G + + FNIL H FCK G++ + I + G P +V++N
Sbjct: 120 YFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFN 179
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TL++ Y K G LN+ F L + M V PD+ TY+ L+NGLCKE K+ + ++LF M+
Sbjct: 180 TLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDX 239
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L A
Sbjct: 240 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQA 299
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+L+ E+ G+ + Y LI C++ A R+ ++ Y L+
Sbjct: 300 QDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISG 359
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC+ DA + EM+ +KP + TY +I FC G LM EM G +P
Sbjct: 360 LCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 419
Query: 520 SQICRVLING 529
VL+NG
Sbjct: 420 VVTYNVLMNG 429
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ +I++Y + G L DA YR+ T ++ L K + +
Sbjct: 69 DIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 128
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++CKEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 129 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 188
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 189 GDLNEXFRLKKAMQASGVQ-----------------------------------PDVYTY 213
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + D L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 214 SVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 273
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 274 QSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLET 333
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E + R ++ +++ +I L
Sbjct: 334 AFEYRXRMIKENIRLDDVAYTALISGL 360
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 124/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ +
Sbjct: 17 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGI 76
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 77 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 135
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + C++ A S+ + I + G PS+ +N LM K + +
Sbjct: 136 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXF 195
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK M ++P + TY LI C + + L DEML+ G++P+ LI+G+
Sbjct: 196 RLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGH 255
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 256 CKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 315
Query: 591 LTCKYMI 597
+T +I
Sbjct: 316 ITYTTLI 322
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 246/523 (47%), Gaps = 33/523 (6%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN---YCLIVHI 135
LQ+ L L P L + + L ++ + AL FF WV E K + N Y L++ I
Sbjct: 82 LQSSLAELAPSLSKTTVLQTLQLIRTPA-KALHFFRWV----EAKGFTHNEQSYFLMIEI 136
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
L + + A + + + D F + S WA GL +ES K F+
Sbjct: 137 LGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN--SLIRSYGWA----GLFQESIKVFKT 190
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNG 254
++G PS+V+ N LL+ +LK Q+++EM G+ P+T+TFNIL FC N
Sbjct: 191 MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVT 312
VD+ F +++ DPD+VTYNTL+ C+ G++ A + + M ++ N+ P++VT
Sbjct: 251 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YTTL+ G C + + EA L MV RGL P+ ++YNTLI C+ K+ + K +L M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 373 GNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G+G + PDT T +++ + G+L A ++ ++ V Y L+ +LCQ
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430
Query: 432 FAATSLLERIGQD-------GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
A + + + G P + YN + E LC A + +++ R +
Sbjct: 431 RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP 490
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S Y+ LI C G L+ ML +PD++ ++I+G + D A L
Sbjct: 491 PS-YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLE 549
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDG------DLSKLMELQKRF 581
K + T ++++ E G L KLM L++R
Sbjct: 550 KMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLM-LERRI 591
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 157/363 (43%), Gaps = 48/363 (13%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P++V+ L+ G + + + EM G+ PN T+N L C+ +DK+
Sbjct: 304 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363
Query: 261 GFLEK-IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE + + GF PD T NTLI ++C G+L +AF ++ M V PD TY+ L+
Sbjct: 364 EILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRS 423
Query: 320 LCKEGKVREAHQLFHRMVHR-------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
LC+ G R A + F + + G P + +YN + C GK ++++ + ++M
Sbjct: 424 LCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLM 483
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G D + + ++ G+ +EG + +L+V + R + Y +I L + P
Sbjct: 484 KRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPV 542
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESL----CKCDSVADALLLKDEMVDRNIKPSLSTY 488
A LE++ + ++P+ I++ ++ +L C +S + L+ + + +NI S T
Sbjct: 543 LAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTM 602
Query: 489 RAL-----------------------------------ICCFCGIGRSGEAVSLMDEMLE 513
L I C + EA +L E++E
Sbjct: 603 EELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVE 662
Query: 514 SGM 516
GM
Sbjct: 663 KGM 665
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 164/365 (44%), Gaps = 14/365 (3%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT---YNTLISSYCKKGRL 291
G N ++ ++ + ++ +++ F+ IE++ + +N+LI SY G
Sbjct: 122 GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLF 181
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNT 350
++ +++ M V P +VT+ +L++ + K G+ A QLF M+ G++PD ++N
Sbjct: 182 QESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 241
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI +C + E EM PD T +V G + G++ A N+V + +
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 411 VSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++S ++ Y LI C A SLL + G P+ YN L++ LC+ +
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDK 361
Query: 469 ALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+ + MV D P T LI C +G+ EA S+ ++M E + PDS VL+
Sbjct: 362 IKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLV 421
Query: 528 NGYCMEKDVNKAEALLGFFA-KKFQIYD------TESYNAVFNMFAEDGDLSKLMELQKR 580
C D +AE A K+ ++D +YN +F +G K + ++
Sbjct: 422 RSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQ 481
Query: 581 FLRLG 585
++ G
Sbjct: 482 LMKRG 486
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 146/327 (44%), Gaps = 12/327 (3%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D GF P + N L+ + +++ + V+E+M + + P++ T+++L C+ GD
Sbjct: 372 DGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFR 431
Query: 258 KVNGFLEKIEEE-------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+ F +++ E+ G P + YN + C G+ A ++R + +R D
Sbjct: 432 RAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDP 490
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+Y TL+ G C+EG L M+ R PD +Y +I K+G + L +
Sbjct: 491 PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 550
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEG---RLLSALNLVVELQ-RFGVSISRDIYDYLIVALC 426
M+ + P T I+ ++G S + L++E + R + +S + L+ LC
Sbjct: 551 MLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLC 610
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
Q + A +L + +++ + ++ LCK V++A L E+V++ ++ L+
Sbjct: 611 QSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLT 670
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLE 513
L GR EA + +M E
Sbjct: 671 CQEDLRISLEAEGRLNEAKFVSKKMPE 697
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 119/294 (40%), Gaps = 56/294 (19%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE---LVKD--CPHSVDVFQDLIS- 171
++L ++P S+ Y ++V L F A + EL E L+ D C V + +
Sbjct: 406 SELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEY 465
Query: 172 -CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
C+ G +++ + FR+ + G Q S L+ G + + + +
Sbjct: 466 LCSN---------GKTKKAERVFRQLMKRGTQDP-PSYKTLILGHCREGTPEAGFDLLVL 515
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R P+ T+ ++ K GD + LEK+ + P +++++++ +KG
Sbjct: 516 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGC 575
Query: 291 LNDAFYLYRIMYRRNVLP--DLVTYT---------------------------------- 314
+++ L ++M R + DL T+T
Sbjct: 576 AHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDID 635
Query: 315 ---TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
T+++GLCK KV EA L++ +V +G+ + L + EG++ E+K
Sbjct: 636 MCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAK 689
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 246/522 (47%), Gaps = 33/522 (6%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN---YCLIVHI 135
LQ+ L L P L + + L ++ + AL FF WV E K + N Y L++ I
Sbjct: 82 LQSSLAELAPSLSKTTVLQTLQLIRTPA-KALHFFRWV----EAKGFTHNEQSYFLMIEI 136
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
L + + A + + + D F + S WA GL +ES K F+
Sbjct: 137 LGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN--SLIRSYGWA----GLFQESIKVFKT 190
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNG 254
++G PS+V+ N LL+ +LK Q+++EM G+ P+T+TFNIL FC N
Sbjct: 191 MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 250
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVT 312
VD+ F +++ DPD+VTYNTL+ C+ G++ A + + M ++ N+ P++VT
Sbjct: 251 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 310
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YTTL+ G C + + EA L MV RGL P+ ++YNTLI C+ K+ + K +L M+
Sbjct: 311 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 370
Query: 373 GNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G+G + PDT T +++ + G+L A ++ ++ V Y L+ +LCQ
Sbjct: 371 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 430
Query: 432 FAATSLLERIGQD-------GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
A + + + G P + YN + E LC A + +++ R +
Sbjct: 431 RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP 490
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S Y+ LI C G L+ ML +PD++ ++I+G + D A L
Sbjct: 491 PS-YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLE 549
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDG------DLSKLMELQKR 580
K + T ++++ E G L KLM L++R
Sbjct: 550 KMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLM-LERR 590
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 164/365 (44%), Gaps = 14/365 (3%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT---YNTLISSYCKKGRL 291
G N ++ ++ + ++ +++ F+ IE++ + +N+LI SY G
Sbjct: 122 GFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLF 181
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNT 350
++ +++ M V P +VT+ +L++ + K G+ A QLF M+ G++PD ++N
Sbjct: 182 QESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 241
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI +C + E EM PD T +V G + G++ A N+V + +
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 411 VSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++S ++ Y LI C A SLL + G P+ YN L++ LC+ +
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDK 361
Query: 469 ALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+ + MV D P T LI C +G+ EA S+ ++M E + PDS VL+
Sbjct: 362 IKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLV 421
Query: 528 NGYCMEKDVNKAEALLGFFA-KKFQIYD------TESYNAVFNMFAEDGDLSKLMELQKR 580
C D +AE A K+ ++D +YN +F +G K + ++
Sbjct: 422 RSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQ 481
Query: 581 FLRLG 585
++ G
Sbjct: 482 LMKRG 486
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 11/342 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR----- 233
A+ +G + E+F F K ++ QP + + L+ L + + + ++E+
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 234 --IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+G P +N + C NG K ++ + G D +Y TLI +C++G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTP 506
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
F L +M RR+ +PD TY +++GL K+G AH+ +M+ P ++++
Sbjct: 507 EAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSI 566
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
+ A ++G ES SL+ M+ I + V+ K G A + L G
Sbjct: 567 LAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGY 626
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ + L+ LCQ + A +L + +++ + ++ LCK V++A
Sbjct: 627 LVK---MEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFA 683
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L E+V++ ++ L+ L GR EA + +M E
Sbjct: 684 LYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKMPE 725
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 146/330 (44%), Gaps = 19/330 (5%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D GF P + N L+ + +++ + V+E+M + + P++ T+++L C+ GD
Sbjct: 372 DGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFR 431
Query: 258 KVNGFLEKIEEE-------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+ F +++ E+ G P + YN + C G+ A ++R + +R D
Sbjct: 432 RAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDP 490
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+Y TL+ G C+EG L M+ R PD +Y +I K+G + L +
Sbjct: 491 PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 550
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEG---RLLSALNLVVELQ-RFGVSISRDIYDYLIVALC 426
M+ + P T I+ ++G S + L++E + R + +S L +
Sbjct: 551 MLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGL 610
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
QD + F LL ++GY+ +E EL+ LC+ + +A + +++ +
Sbjct: 611 QD-KAFMTIGLLY---ENGYLVKME---ELVSFLCQSRKLLEAQKMLLFSLEKRQSVDID 663
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+I C + EA +L E++E GM
Sbjct: 664 MCSTVISGLCKAHKVSEAFALYYELVEKGM 693
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 207/441 (46%), Gaps = 37/441 (8%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F K + +G QP+IV+ L+NGL K+ Q +++++M G P+ +T+N + +
Sbjct: 147 GFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN 206
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G+ G L+K+EE G P++VTY+TLI S C+ +N+A ++ M + + P
Sbjct: 207 GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266
Query: 309 DLVTYTTLMNGLCK-----------------------------------EGKVREAHQLF 333
D+ TYT+L+ GLCK EGKV EA +
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M G+ P++V+Y++L++ Y + E++ L + M+ G P+ F+ I++ GY K
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
R+ A+ L E+ G++ + Y+ LI CQ + A L + +G +P L Y
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L++ CK + A L M +KP+L Y L+ C G +A L E+
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ P Q+ +ING C E +++A EA A D SYN + + D S
Sbjct: 507 QGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPP-DEISYNVIIRGLLQHKDES 565
Query: 573 KLMELQKRFLRLGFAPNNLTC 593
+ + L GF + C
Sbjct: 566 RALLLVGEMRDRGFIADVRPC 586
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 204/425 (48%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A VK+G + + K ++ VG P+I + + +N +L +D + V ++ ++G+
Sbjct: 101 AIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQ 160
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P TF L + CK G+ + + + +G PD+ TYNT+I+ CK G A L
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL 220
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M P++VTY+TL++ LC++ V EA +F M +G+SPDI +Y +LI CK
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ +E+ +LL EM I PD T ++V + KEG++ AL ++ + GV +
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ A L + G P++ YN L+ CK + +A+ L +EM+
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + P+ +Y LI FC +G+ EA L M +G LPD +L++G+C + +
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L + + Y + + + G+ +L G P+ +I
Sbjct: 461 KAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520
Query: 598 HSLWK 602
+ L K
Sbjct: 521 NGLCK 525
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 203/423 (47%), Gaps = 1/423 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN-CIDQCWQVYEEMGRIGICPNTHTFN 244
I ++ +F L P I+ LL+ ++K+ D + ++M +G+ PN +T +
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I + FC+ VD L K+ + G P +VT+ TLI+ CK G A L+ M +
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+ TY T++NGLCK G+ A L +M G P++V+Y+TLI + C++ + E+
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ M GI PD FT ++QG K R A L+ E+ + ++ L+
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C++ + A +L+ + + G P++ Y+ LM V +A L M+ + KP+
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ +Y LI +C R EA+ L +EM+ G+ P++ LI+G+C + +A+ L
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ D +Y+ + + F + G L K L + PN + ++H++ K
Sbjct: 433 NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSG 492
Query: 605 ERK 607
K
Sbjct: 493 NHK 495
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 152/341 (44%), Gaps = 39/341 (11%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+ E+ F G P I + L+ GL K + + + EM + I P+ TFN
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY-------------------------- 278
+L FCK G V + G L+ + E G +P++VTY
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367
Query: 279 ---------NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
N LI+ YCK R+++A L+ M + + P+ V+Y TL++G C+ GK+REA
Sbjct: 368 GCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREA 427
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
LF M G PD+ +Y+ L+ +CK+G + ++ L M + P+ I+V
Sbjct: 428 QDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHA 487
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G A L EL G+ +Y +I LC++ A + DG P
Sbjct: 488 MCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPD 547
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDR----NIKPSLS 486
YN ++ L + + ALLL EM DR +++P LS
Sbjct: 548 EISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLS 588
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 166/343 (48%), Gaps = 10/343 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F+++K I P Y ++ L +++ A +L E+ S+++ D
Sbjct: 252 ALDIFSYMKAK-GISPDIFTYTSLIQGLCKFSRWKEASALLNEMT--------SLNIMPD 302
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+++ + + K G + E+ + ++G +P++V+ + L+ G + + +++
Sbjct: 303 IVTFNVLVD-TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M G PN ++NIL + +CK +D+ ++ +G P+ V+YNTLI +C+
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G+L +A L+R M LPDL TY+ L++G CK+G + +A +LF M L P++V Y
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
L+ A CK G ++++ L E+ G+ P I+ G KEG L AL ++
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G Y+ +I L Q A L+ + G++ +
Sbjct: 542 DGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 127/301 (42%), Gaps = 44/301 (14%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
L I P + ++V K S A+ +L + E+ +V + L+
Sbjct: 295 TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM--GVEPNVVTYSSLM------- 345
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y + E+ K F + G +P+I S N L+NG K ID+ Q++ EM G+
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN ++N L H FC+ G + + + G PDL TY+ L+ +CK+G L AF L
Sbjct: 406 PNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL 465
Query: 298 YRIMYRRNVLPDLVTYT-----------------------------------TLMNGLCK 322
+R M + P+LV YT T++NGLCK
Sbjct: 466 FRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG + EA + F M G PD +SYN +I + + L+ EM G D
Sbjct: 526 EGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRP 585
Query: 383 C 383
C
Sbjct: 586 C 586
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 152/571 (26%), Positives = 258/571 (45%), Gaps = 69/571 (12%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN-------------- 140
+ RVL + AL FF W + K + Y +I+ ILA N
Sbjct: 50 LVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVS 109
Query: 141 ----------------KFSFAMKMLCE-----------------------LVELVKDCPH 161
+ +A K + E ++ L++D
Sbjct: 110 VKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDS 169
Query: 162 SVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
S+DV +++ + +C ++ K G ++E+ + + +G P+ V+ N
Sbjct: 170 SIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYN 229
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L+NGL ++Q ++ +EM R+G+ + +T++ L +C+ G +D+ + E++
Sbjct: 230 VLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSR 289
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G P LVTYNT++ CK GR++DA L +M +N++PDLV+Y TL+ G + G + EA
Sbjct: 290 GAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 349
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
LF + RGL P +V+YNTLI C+ G + + L EM+ +G PD FT I+V+G
Sbjct: 350 FLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRG 409
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ K G L A L E+ G+ R Y IV + P A + E + G+ P
Sbjct: 410 FCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPD 469
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
L YN ++ L K ++ +A L +M+ + P TY ++I G +A ++
Sbjct: 470 LITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFL 529
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA--KKFQIYDTESYNAVFNMFAE 567
EML G+ P VLI+ Y + + A+L FF +K + +YNA+ N +
Sbjct: 530 EMLSKGIFPSVVTYTVLIHSYAVRGRLKL--AILHFFEMHEKGVHPNVITYNALINGLCK 587
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ + + G +PN T +I+
Sbjct: 588 VRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 182/369 (49%), Gaps = 9/369 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y I++ L + S A K+L D + ++ DL+S + Y ++
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLL--------DVMVNKNLMPDLVSYN-TLIYGYTRL 343
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+F F + G PS+V+ N L++GL ++ +D ++ +EM + G P+ TF
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL FCK G++ +++ G PD Y T I K G + AF + M
Sbjct: 404 TILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 463
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R PDL+TY ++GL K G ++EA +L +M++ GL PD V+Y ++I A+ G +++
Sbjct: 464 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 523
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++++ EM+ GI+P T +++ Y GRL A+ E+ GV + Y+ LI
Sbjct: 524 ARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 583
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ + A + G P+ Y L+ C +AL L +M+DR I+P
Sbjct: 584 GLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643
Query: 484 SLSTYRALI 492
T+ AL+
Sbjct: 644 DSCTHSALL 652
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 134/260 (51%), Gaps = 12/260 (4%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLIS-CTEDCNWAYV-------KVGLIRESFKTF 193
F+ ++ C+L L P + ++F ++++ + +AY+ K+G ++F
Sbjct: 403 FTILVRGFCKLGNL----PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 458
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
+ L GF P +++ N ++GL KL + + ++ ++M G+ P+ T+ + H
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + K ++ +G P +VTY LI SY +GRL A + M+ + V P+++TY
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
L+NGLCK K+ +A++ F M +G+SP+ +Y LI C G QE+ L +M+
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638
Query: 374 NGIYPDTFTCQIIVQGYGKE 393
I PD+ T +++ K+
Sbjct: 639 REIQPDSCTHSALLKHLNKD 658
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
L E ELVK ++ + D ++ T + A++ G +R++ F + L G PS+V+
Sbjct: 486 LKEASELVKKMLYN-GLVPDHVTYTSIIH-AHLMAGHLRKARAVFLEMLSKGIFPSVVTY 543
Query: 209 NFLLN-----GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
L++ G LKL + + EM G+ PN T+N L + CK +D+ F
Sbjct: 544 TVLIHSYAVRGRLKLAILH-----FFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ +G P+ TY LI+ C G +A LY+ M R + PD T++ L+ L K+
Sbjct: 599 TEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKD 658
Query: 324 GK 325
K
Sbjct: 659 YK 660
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 198/401 (49%), Gaps = 2/401 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++VS + ++NG +D+ + ++ EM GI P+ T+ + CK D+ G
Sbjct: 197 PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ + GF P+ TYN LI Y G+ + + M R + PD TY +L+N LCK
Sbjct: 257 FQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCK 316
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ REA F M+ +G+ P + +Y LI Y +G + E S L M+ NG+ PD
Sbjct: 317 NGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI 376
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I Y K G + A+++ ++++ G+S + Y LI ALC+ R A ++
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P++ ++N L+ LC D A L EM+D+ I P+ + LIC C +GR
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE-SYNAV 561
E L+D M G+ PD+ LI+GYC+ ++AE + + TE +YN +
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMV-SIGLSPTEVTYNTL 555
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + L + LR G P +T ++H L++
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQ 596
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 192/422 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+ +G +E + + G +P + LLN L K + ++ M R GI P
Sbjct: 278 GYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKP 337
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ IL H + G + +++ FL+ + E G PD +N S+Y K G ++ A ++
Sbjct: 338 KVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 397
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P++V Y L++ LCK G+V +A F++M++ G++P+IV +N+L++ C
Sbjct: 398 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 457
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K + ++ L+YEM+ GI P+ ++ GR++ L+ ++ GV Y
Sbjct: 458 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 517
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C R A + + + G P+ YN L+ C + DA L EM+
Sbjct: 518 TPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLR 577
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P + TY ++ R EA L M+ SG D +++NG C V++
Sbjct: 578 KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDE 637
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A + K + ++ + + G M+L G PN +T + +
Sbjct: 638 AFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAE 697
Query: 599 SL 600
+L
Sbjct: 698 NL 699
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 203/449 (45%), Gaps = 13/449 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP S Y +++H A S L +VE H + F S AY
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHI--FNIFFS-------AYA 385
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+I ++ F K G P++V+ L++ L KL +D + +M G+ PN
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L + C ++ + ++ ++G P+ V +NTLI + C GR+ + L +M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD +YT L++G C G+ EA ++F MV GLSP V+YNTL+ YC ++
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L EM+ G+ P T I+ G + R A L + + G DIY Y
Sbjct: 566 DDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC--DIYTYN 623
Query: 422 IV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I+ LC+ N A + + + G ++ + ++ +L K DA+ L +
Sbjct: 624 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 683
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P++ TYR + G E SL M ++G P+SQ+ L+ D+++A
Sbjct: 684 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAED 568
A L ++ + + + + ++F D
Sbjct: 744 GAYLSKLDERNFSVEASTTSLLMSIFTSD 772
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 180/427 (42%), Gaps = 35/427 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G RE+ F + G +P + + L++G + + + M G+ P+ H
Sbjct: 316 KNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHH 375
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNI + K G +DK K+ + G P++V Y LI + CK GR++DA + M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
V P++V + +L+ GLC G+V
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E +L M H G+ PD SY LI YC G+ E++ + M+ G+ P T +
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY R+ A L E+ R GV+ Y+ ++ L Q R A L + G
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ LCK + V +A + + + ++ ++ T+ +I GR +A+
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L + +G++P+ R++ E + + ++L K +++ NA+
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 735
Query: 567 EDGDLSK 573
GD+S+
Sbjct: 736 HRGDISR 742
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 179/423 (42%), Gaps = 10/423 (2%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI------GICPNTH 241
++ K F + L S+ + N LL + + C R+ + PN
Sbjct: 32 DALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLC 91
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRI 300
T++IL FC+ G ++ I + G+ D + N L+ C R+ +A L +
Sbjct: 92 TYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQR 151
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH---RGLSPDIVSYNTLIFAYCK 357
M +PD V+YT L+ GLC E + EA +L H M R P++VSY+ +I +
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
EG++ + +L EM+ GI PD T ++ G K A + ++ G +
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI + +LE + G P Y L+ LCK +A D M+
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ IKP +STY LI + G E S +D M+E+G+ PD I + + Y ++
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA + + + +Y A+ + + G + + + G PN + ++
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 451
Query: 598 HSL 600
+ L
Sbjct: 452 YGL 454
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 6/368 (1%)
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEE--EGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
H ++ C + V+ F + E + P+L TY+ LI +C+ G L F +
Sbjct: 54 HLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAF 113
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ-LFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ + D + L+ GLC +V EA L RM G PD VSY L+ C
Sbjct: 114 GLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCN 173
Query: 358 EGKMQESKSLLYEMM---GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
E + +E+ LL+ M G P+ + I++ G+ EG++ NL +E+ G+
Sbjct: 174 EKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPD 233
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y +I LC+ A + +++ +G+ P+ YN L+ + + + +
Sbjct: 234 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLE 293
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EM R +KP TY +L+ C GR EA D M+ G+ P +LI+GY +
Sbjct: 294 EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+++ + L + D +N F+ +A+ G + K M++ + + G +PN +
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 595 YMIHSLWK 602
+I +L K
Sbjct: 414 ALIDALCK 421
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 119/262 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G E+ K F + +G P+ V+ N LL+G + ID + ++ EM R G+ P
Sbjct: 523 GYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 582
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+N + H + + + G D+ TYN +++ CK +++AF ++
Sbjct: 583 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMF 642
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + + +++T+T ++ L K G+ +A LF + GL P++V+Y + +E
Sbjct: 643 QSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEE 702
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++E SL M NG P++ +V+ G + A + +L S+
Sbjct: 703 GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTT 762
Query: 419 DYLIVALCQDNRPFAATSLLER 440
L+ D A SL E+
Sbjct: 763 SLLMSIFTSDEYQHHAKSLPEK 784
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 231/459 (50%), Gaps = 9/459 (1%)
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESF 190
++++ L N FA+ +L ++ +L + F LI+ CN G I+E+
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKL--GIHPTASTFNALINGL--CNE-----GKIKEAV 178
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ F + + G +P+++S N ++NGL K V+++M + G P+ T+N +
Sbjct: 179 ELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSL 238
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK+ V+ FL ++ + G P++ TYN ++ +C G+LN+A L++ M R+V+PD
Sbjct: 239 CKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDT 298
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
VT T L++GLCKEG V EA +F M +G+ P+I +YN L+ YC + M E+K +
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI 358
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ G P + I++ G+ K R+ A +L+ E+ ++ Y L+ LCQ R
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
P A ++ + + G +P+L Y+ L++ CK + +AL L M ++ ++P++ +
Sbjct: 419 PKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTI 478
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI G+ A L ++ G+ P + V+I G E ++A L
Sbjct: 479 LIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 538
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++ SYN + F ++ D S + L + F+ N
Sbjct: 539 FLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSAN 577
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 198/404 (49%), Gaps = 2/404 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G ++ S N L+N L +LN +D + +M ++GI P TFN L + C G + +
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEA 177
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ G +P++++YNT+I+ CK G + A +++ M + PD+VTY T+++
Sbjct: 178 VELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS 237
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ V +A + M+ RG+ P++ +YN ++ +C G++ E+ L EM+G + PD
Sbjct: 238 LCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPD 297
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVE-LQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
T T I+V G KEG ++S LV E + GV + Y+ L+ C A +
Sbjct: 298 TVTLTILVDGLCKEG-MVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G P + YN L+ CK + +A L EM + + P TY L+ C
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR EA+++ EM G+LP+ +L++G+C +++A LL +K + +
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G L EL + G P T MI L K
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 182/383 (47%), Gaps = 2/383 (0%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID + M R+ P+ F F K V +++ G ++ + N
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ C+ ++ A + M++ + P T+ L+NGLC EGK++EA +LF+ MV RG
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
P+++SYNT+I CK G + + +M NG PD T I+ K+ + A+
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERIGQDGYVPSLEIYNELMES 459
+ E+ G+ + Y+ ++ C + AT L E +G+D +P L++
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD-VMPDTVTLTILVDG 307
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LCK V++A L+ + M ++ ++P++STY AL+ +C EA + + M+ G P
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+LING+C + +++A++LL K DT +Y+ + + G + + + K
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427
Query: 580 RFLRLGFAPNNLTCKYMIHSLWK 602
G PN +T ++ K
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCK 450
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 221/470 (47%), Gaps = 14/470 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
IKP S + +++ L ++ A+ ML ++ LV D V Q
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ-----------G 233
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG-RIGICP 238
Y++ G + + + + ++ G S VS N +++G K ++ +EM + G P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TFN L + CK G V ++ + +EG+DPD+ TYN++IS CK G + +A +
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P+ VTY TL++ LCKE +V EA +L + +G+ PD+ ++N+LI C
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + L EM G PD FT +++ +G+L ALN++ +++ G + S Y
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ N+ A + + + G + YN L++ LCK V DA L D+M+
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
KP TY +L+ FC G +A ++ M +G PD LI+G C V
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
A LL K +YN V ++ + L + L AP
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 232/532 (43%), Gaps = 28/532 (5%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML-------CEL 152
LR Q D +AL FN P + Y I+ L + F K+L CE+
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 153 --------------VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE--SFK----T 192
EL + VD D D ++ + L+ + S K +
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
K G +P + + N L+ L + + + + E+M G+ P+ TF + + +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLV 311
GD+D E++ E G V+ N ++ +CK+GR+ DA + M ++ PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
T+ TL+NGLCK G V+ A ++ M+ G PD+ +YN++I CK G+++E+ +L +M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ P+T T ++ KE ++ A L L G+ ++ LI LC
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L E + G P YN L++SLC + +AL + +M S+ TY L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I FC ++ EA + DEM G+ +S LI+G C + V A L+ + Q
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +YN++ F GD+ K ++ + G P+ +T +I L K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 175/350 (50%), Gaps = 2/350 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G ++E+ + + + P+ V+ N L++ L K N +++ ++ + GI P+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + E++ +G +PD TYN LI S C KG+L++A + + M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++TY TL++G CK K REA ++F M G+S + V+YNTLI CK ++
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ +M+ G PD +T ++ + + G + A ++V + G Y L
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN- 480
I LC+ R A+ LL I G + YN +++ L + +A+ L EM+++N
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 481 IKPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P +YR + C G G EAV + E+LE G +P+ +L G
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G I+++ + G +P IV+ L++GL K ++ ++ + GI
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 240 THTFN-ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK-KGRLNDAFYL 297
H +N ++ +F K + +N F E +E+ PD V+Y + C G + +A
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 298 YRIMYRRNVLPDLVTYTTLMNGL 320
+ + +P+ + L GL
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGL 692
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 219/466 (46%), Gaps = 48/466 (10%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASXVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + F +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W Y+E+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ P Y L+
Sbjct: 300 QANDLIXEMSMKGLK-----------------------------------PDKITYTTLI 324
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ CK ++ A + M++ NI+ Y ALI C GR +A ++ ML G+
Sbjct: 325 DGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLK 384
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
PD+ ++IN +C + DV K LL + + +YN + N
Sbjct: 385 PDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 156/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI +Y + G L DA YR+
Sbjct: 45 VVSRKGKGSASXVFAAILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFX 104
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 105 XPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSV 164
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M +G+ PD +T +++ G K
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCK 224
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + +++ +P L
Sbjct: 225 EXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 284
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L EM + +KP TY LI C G A M+
Sbjct: 285 YNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMI 344
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E + D LI+G C E AE +L D +Y + N F + GD+
Sbjct: 345 EENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVW 404
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G P+ +T
Sbjct: 405 KGSKLLKEMQRDGHVPSVVT 424
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 203/399 (50%), Gaps = 5/399 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS++ N L+ ++++ D +Y++M R I + ++F IL FC +
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ + G PD+VT+ TL+ C R+++A L+ + R PD++T+TTLMNGLC+
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCR 194
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG+V EA L RMV GL PD ++Y T + CK G + +LL +M + I P+
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ G K+GR + NL +E+Q G+ + Y+ +I C R AA LL+ +
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P++ YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G PD LI+GYC K ++ LL ++ + +T +YN +
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L ++ + G P+ +TC ++ L
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 213/452 (47%), Gaps = 22/452 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ IKP Y I+ L + + S + + E+
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM--------QDK 282
Query: 164 DVFQDLISCTEDCN-WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F +++ T +C + G + + ++ L+ P++V+ N L+N +K
Sbjct: 283 GIFPNIV--TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFF 340
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T+N + FCK +D + +G PD+ T+ TLI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M RR ++ + VTY TL++G C G + A L +M+ G+
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ NTL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + +G + P++
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ CK V D L L EM R I Y LI F +G A+ + EM
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ SG+ PD+ R ++ G+ ++++ +A A+L
Sbjct: 641 ISSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 197/426 (46%), Gaps = 16/426 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ LL+GL + + + ++ ++ R P+ TF L +
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMN 190
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G V + L+++ E G PD +TY T + CK G A L R M ++
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++GLCK+G+ ++H LF M +G+ P+IV+YN +I +C G+ ++ L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I P+ T ++ + KEG+ A L E+ G+ + Y+ +I C+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+R AA + + G P + + L++ C + D + L EM R + + T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI FC +G A+ L +M+ SG+ PD C L++G C + A +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 548 KKFQIYDTE-----------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K D +YN + +G + EL + G P+ +T M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 597 IHSLWK 602
I L K
Sbjct: 551 IDGLCK 556
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 233/506 (46%), Gaps = 26/506 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L +++ S A+ + ++ C V F
Sbjct: 135 ALSTFGKLTK-LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI------CRPDVLTFTT 187
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G + E+ + ++ G QP ++ ++G+ K+ +
Sbjct: 188 LMN-------GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240
Query: 229 EEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M I I PN ++ + CK+G + +++++G P++VTYN +I +C
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR + A L + M R + P++VTY L+N KEGK EA +L+ M+ RG+ P+ ++
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN++I +CK+ ++ ++ + Y M G PD FT ++ GY R+ + L+ E+
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
R G+ + Y+ LI C AA L +++ G P + N L++ LC +
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 468 DALLLKDEMVD-----------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
DAL + M ++P + TY LIC G+ EA L +EM G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+PD+ +I+G C + +++A + K + ++N + N + + G + +E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L R G + + +I+ K
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRK 626
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 5/391 (1%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +G ++ ++ ++ +M R P+ FN L + D V +K+E +
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D+ ++ LI +C +L A + + + + PD+VT+TTL++GLC + +V EA
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
LFH++ PD++++ TL+ C+EG++ E+ +LL M+ NG+ PD T V G
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 391 GKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G +SALNL+ +++ + + IY +I LC+D R + +L + G P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN ++ C + A L EM++R I P++ TY ALI F G+ EA L D
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EML G++P++ +I+G+C + ++ AE + A K D ++ + + +
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ MEL R G N +T +IH
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 179/410 (43%), Gaps = 22/410 (5%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKN 118
+ I+D +C + DSH ++ K + P++ + + C S SA
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN-CMIGGFCISGRWSAAQRLLQEML 315
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
+ +I P Y +++ KF A ++ E+ L + + + +I
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITYNSMID------- 366
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K + + F G P + + L++G ID ++ EM R G+
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N L H FC GD++ +++ G PD+VT NTL+ C G+L DA ++
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Query: 299 RIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ M + V PD++TY L+ GL EGK EA +L+ M HRG+ PD ++
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+ L L E+
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
R G+ IY LI + A + + + G P ++ I N L
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-------- 234
VG + + ++ + G P IV+CN LL+GL + ++++ M +
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ P+ T+NIL G + E++ G PD +TY+++I CK+ RL
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRL 560
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A ++ M ++ P++VT+ TL+NG CK G+V + +LF M RG+ D + Y TL
Sbjct: 561 DEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITL 620
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I+ + K G + + + EM+ +G+YPDT T + ++ G+ + L A+ ++ +LQ
Sbjct: 621 IYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 203/399 (50%), Gaps = 5/399 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS++ N L+ ++++ D +Y++M R I + ++F IL FC +
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ + G PD+VT+ TL+ C R+++A L+ + R PD++T+TTLMNGLC+
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCR 194
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTF 381
EG+V EA L RMV GL PD ++Y T + CK G + +LL +M + I P+
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
I+ G K+GR + NL +E+Q G+ + Y+ +I C R AA LL+ +
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ P++ YN L+ + K +A L DEM+ R I P+ TY ++I FC R
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M G PD LI+GYC K ++ LL ++ + +T +YN +
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F GDL+ ++L ++ + G P+ +TC ++ L
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 219/463 (47%), Gaps = 23/463 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ IKP Y I+ L + + S + + E+
Sbjct: 231 GDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEM--------QDK 282
Query: 164 DVFQDLISCTEDCN-WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+F +++ T +C + G + + ++ L+ P++V+ N L+N +K
Sbjct: 283 GIFPNIV--TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFF 340
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++Y+EM GI PNT T+N + FCK +D + +G PD+ T+ TLI
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 400
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
YC R++D L M RR ++ + VTY TL++G C G + A L +M+ G+
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 460
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-----------NGIYPDTFTCQIIVQGYG 391
PDIV+ NTL+ C GK++++ + M NG+ PD T I++ G
Sbjct: 461 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLI 520
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG+ L A L E+ G+ Y +I LC+ +R AT + +G + P++
Sbjct: 521 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVV 580
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ CK V D L L EM R I Y LI F +G A+ + EM
Sbjct: 581 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 640
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
+ SG+ PD+ R ++ G+ ++++ +A A+L +++Q+ D
Sbjct: 641 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL-QRYQLED 682
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 197/426 (46%), Gaps = 16/426 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +G P +V+ LL+GL + + + ++ ++ R P+ TF L +
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMN 190
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G V + L+++ E G PD +TY T + CK G A L R M ++
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y+ +++GLCK+G+ ++H LF M +G+ P+IV+YN +I +C G+ ++ L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I P+ T ++ + KEG+ A L E+ G+ + Y+ +I C+
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+R AA + + G P + + L++ C + D + L EM R + + T
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI FC +G A+ L +M+ SG+ PD C L++G C + A +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490
Query: 548 KKFQIYDTE-----------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
K D +YN + +G + EL + G P+ +T M
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550
Query: 597 IHSLWK 602
I L K
Sbjct: 551 IDGLCK 556
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 233/506 (46%), Gaps = 26/506 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L + P + ++H L +++ S A+ + ++ C V F
Sbjct: 135 ALSTFGKLTK-LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI------CRPDVLTFTT 187
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G + E+ + ++ G QP ++ ++G+ K+ +
Sbjct: 188 LMN-------GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLL 240
Query: 229 EEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M I I PN ++ + CK+G + +++++G P++VTYN +I +C
Sbjct: 241 RKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCI 300
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR + A L + M R + P++VTY L+N KEGK EA +L+ M+ RG+ P+ ++
Sbjct: 301 SGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 360
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN++I +CK+ ++ ++ + Y M G PD FT ++ GY R+ + L+ E+
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
R G+ + Y+ LI C AA L +++ G P + N L++ LC +
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 468 DALLLKDEMVD-----------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
DAL + M ++P + TY LIC G+ EA L +EM G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+PD+ +I+G C + +++A + K + ++N + N + + G + +E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L R G + + +I+ K
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRK 626
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 195/391 (49%), Gaps = 5/391 (1%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +G ++ ++ ++ +M R P+ FN L + D V +K+E +
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D+ ++ LI +C +L A + + + + PD+VT+TTL++GLC + +V EA
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
LFH++ PD++++ TL+ C+EG++ E+ +LL M+ NG+ PD T V G
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227
Query: 391 GKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G +SALNL+ +++ + + IY +I LC+D R + +L + G P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN ++ C + A L EM++R I P++ TY ALI F G+ EA L D
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYD 347
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EML G++P++ +I+G+C + ++ AE + A K D ++ + + +
Sbjct: 348 EMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAK 407
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ MEL R G N +T +IH
Sbjct: 408 RIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 179/410 (43%), Gaps = 22/410 (5%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKN 118
+ I+D +C + DSH ++ K + P++ + + C S SA
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN-CMIGGFCISGRWSAAQRLLQEML 315
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
+ +I P Y +++ KF A ++ E+ L + + + +I
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITYNSMID------- 366
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K + + F G P + + L++G ID ++ EM R G+
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N L H FC GD++ +++ G PD+VT NTL+ C G+L DA ++
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Query: 299 RIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ M + V PD++TY L+ GL EGK EA +L+ M HRG+ PD ++
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+++I CK+ ++ E+ + M P+ T ++ GY K GR+ L L E+
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNEL 456
R G+ IY LI + A + + + G P ++ I N L
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 214/462 (46%), Gaps = 42/462 (9%)
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+C C +V +G F K + +G QP+I++ L+NGL K Q +++
Sbjct: 132 LINCF--CLMQHVDLG-----FSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELF 184
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
++M G P+ +T+ + + CK G+ G ++K+ E G PD+VTY+TLI S CK
Sbjct: 185 DDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKD 244
Query: 289 GRLNDAFYLYRIMYRR-----------------------------------NVLPDLVTY 313
+N+A ++ M + N++PD+VT+
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTF 304
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+ L++ CKEG V EA + M G+ P++++YN+L+ Y + ++ E++ L M+
Sbjct: 305 SLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G PD F+ I++ GY R+ A L E+ G++ + Y LI A CQ +
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A L + + +GY+P L Y+ L+E CK + A L M +KP+L Y LI
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C G A L E+ G+ PD QI +ING C E +++A +
Sbjct: 485 SMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPP 544
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ SYN + F + D S+ ++L GF + T +
Sbjct: 545 NEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTTAW 586
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 202/397 (50%), Gaps = 9/397 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y I++ L + + A ++ ++ E+ C V + LI + K
Sbjct: 193 QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV--GCQPDVVTYSTLID-------SLCK 243
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
L+ E+ F G P++VS L+ GL + + + EM + I P+ T
Sbjct: 244 DRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVT 303
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L +FCK G+V + G L+ + E G +P+++TYN+L+ Y + + +A L+ +M
Sbjct: 304 FSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMI 363
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R PD+ +Y+ L+NG C ++ EA QLF+ M+H+GL+P+ VSY TLI A+C+ GK++
Sbjct: 364 TRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLR 423
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ L +M NG PD T ++++G+ K+G L A L +Q + + +Y LI
Sbjct: 424 EARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILI 483
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
++C+ A L + G P ++IY ++ LCK + +AL +M +
Sbjct: 484 DSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCP 543
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
P+ +Y +I F AV L+ EM + G + D
Sbjct: 544 PNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 194/418 (46%), Gaps = 1/418 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL-NCIDQCWQVYEEMGRIGICPNTHTFN 244
I ++ +F L P I+ N LL+ ++++ D + ++M G+ PNT T N
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
IL + FC VD L K+ + G P ++T+ TLI+ CK G A L+ M R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+ TYTT++NGLCK G+ A L +M G PD+V+Y+TLI + CK+ + E+
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ M GI P + ++QG R A ++ E+ + + LI
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C++ A +L+ + + G P++ YN LM V +A L D M+ R KP
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ +Y LI +C + R EA L +EM+ G+ P++ LI+ +C + +A L
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK 430
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +Y+ + F + G L K L + PN + +I S+ K
Sbjct: 431 DMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 1/281 (0%)
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK-SLLYEMMGNGIYPDTFTCQ 384
+ +A F+ M+HR P I+ +N L+ A + + ++ SL +M G+ P+T T
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I++ + + +++ ++ + G+ + + LI LC+ A L + +
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P + Y ++ LCK A A L +M + +P + TY LI C EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ + M G+ P LI G C +A A+L + D +++ + ++
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
F ++G++ + + K +G PN +T ++H ME
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/534 (25%), Positives = 245/534 (45%), Gaps = 49/534 (9%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
L H + +VL++ DS AL FFN++ +++++C+++H L +N + A +L
Sbjct: 57 LKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLL 116
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWA-----------YVKVGLIRESFKTFRKTLD 198
L+ + P + F+ + CN++ YV+ + R +D
Sbjct: 117 QTLLLRGLN-PEGL--FESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMD 173
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G P I + + +LNGL+++ +++E+ G+ P+ + + + C+ D +
Sbjct: 174 CGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIR 233
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ ++E G D + TYN I CK R+ +A + ++ + + D+ TY TL+
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 319 GLC-----------------------------------KEGKVREAHQLFHRMVHRGLSP 343
GLC K+G + A L +++ G++P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+ YN LI + CK+GK+ E++SL M G++P+ T I++ + K G+L AL+ +
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
++ G+ + Y LI C+ + AA SL + + +G P++ IY L+ CK
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ +A L EM + I P+ T+ ALI C R EA L EM+E ++P+
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
VLI G+C E + +A LL +K + DT +Y + + G +S+ E
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 199/408 (48%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ ++ GF PS + + L++GL K I + + ++ + G+ P+ +N L + CK+G
Sbjct: 310 EMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDG 369
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+D+ + +G P+ VTY+ LI S+CK+G+L+ A + M + + Y+
Sbjct: 370 KLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYS 429
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+L++G CK GK+R A LF M+ GL P++V Y +LI YCKEG++ + L +EM G
Sbjct: 430 SLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK 489
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
GI P+T+T ++ G R+ A L E+ + V + Y+ LI C++ A
Sbjct: 490 GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
LL+ + + G VP Y L+ LC V++A +++ K + + AL+
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHG 609
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
+C GR +A+ EML G+ D VLI G ++D LL + D
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y + + A+ G+L L + G PN +T +I+ L K
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCK 717
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 151/556 (27%), Positives = 243/556 (43%), Gaps = 83/556 (14%)
Query: 116 VKNDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+KN L K ++ YC +V L +F +M+ E++E P V +L+
Sbjct: 272 IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEF-GFVPSEAAV-SNLVD- 328
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G I +F K G PS+ N L+N + K +D+ ++ MG
Sbjct: 329 ------GLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMG 382
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE------------------------ 268
G+ PN T++IL FCK G +D FL K+ E
Sbjct: 383 HKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLR 442
Query: 269 -----------EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
G P++V Y +LIS YCK+G L++AF LY M + + P+ T+T L+
Sbjct: 443 AAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALI 502
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+GLC ++ EA++LF MV + P+ V+YN LI +CKEG + LL EM+ G+
Sbjct: 503 SGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562
Query: 378 PDTFTCQIIV-----------------------------------QGYGKEGRLLSALNL 402
PDT+T + ++ GY KEGRL AL+
Sbjct: 563 PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDA 622
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
E+ GV++ Y LI + + + LL+++ G P +Y ++++ K
Sbjct: 623 CREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAK 682
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
++ A L D MV P++ TY ALI C IG +A L EML S LP+
Sbjct: 683 AGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 742
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
++ E ++ KA L + F + +T +YN + F + G + + E+ +
Sbjct: 743 YACFLDYLTSEGNIEKAIQLHDVLLEGF-LANTVTYNILIRGFCKLGRIQEAAEVLVNMI 801
Query: 583 RLGFAPNNLTCKYMIH 598
G +P+ ++ +I+
Sbjct: 802 DSGISPDCISYSTIIY 817
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 209/545 (38%), Gaps = 113/545 (20%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++ K A+ L ++ E+ +V + LIS + K+
Sbjct: 388 PNDVTYSILIDSFCKRGKLDVALHFLGKMTEV--GIKATVYPYSSLIS-------GHCKL 438
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R + F + + G +P++V L++G K + +++Y EM GI PNT+TF
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C + + N ++ E P+ VTYN LI +CK+G AF L M
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQ-------------------LFH---------- 334
+ ++PD TY L++GLC G+V EA + L H
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDD 618
Query: 335 ------RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
M+ RG++ D+V Y+ LI+ ++ + LL +M G+ PD ++
Sbjct: 619 ALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMID 678
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN----------RPFAATSL- 437
K G L A L + G + Y LI LC+ A+ SL
Sbjct: 679 ANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 738
Query: 438 -----------------------LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
L + +G++ + YN L+ CK + +A +
Sbjct: 739 NQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 798
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M+D I P +Y +I +C G EA+ L + ML G+ PD+ LI G C+
Sbjct: 799 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVT- 857
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
G+L+K EL+ +R G PN T
Sbjct: 858 ----------------------------------GELTKAFELRDDMMRRGVKPNRATYN 883
Query: 595 YMIHS 599
+IH
Sbjct: 884 SLIHG 888
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 181/446 (40%), Gaps = 78/446 (17%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V ++ LIS Y K G + +F+ + + G P+ + L++GL N +
Sbjct: 459 NVVIYTSLIS-------GYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ +++ EM + PN T+N+L CK G+ + L+++ E+G PD TY L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 282 ISS-----------------------------------YCKKGRLNDAFYLYRIMYRRNV 306
IS YCK+GRL+DA R M R V
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631
Query: 307 L-----------------------------------PDLVTYTTLMNGLCKEGKVREAHQ 331
PD V YTT+++ K G ++ A
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L+ MV G P++V+Y LI CK G M +++ L EM+ + P+ T +
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG + A+ L L G + Y+ LI C+ R A +L + G P
Sbjct: 752 SEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y+ ++ C+ + +A+ L + M++R + P Y LI C G +A L D+M
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 870
Query: 512 LESGMLPDSQICRVLINGYCMEKDVN 537
+ G+ P+ LI+G C+ V+
Sbjct: 871 MRRGVKPNRATYNSLIHGTCLMSSVS 896
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 224/483 (46%), Gaps = 21/483 (4%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+LR AL FFNW +L +Y L++ IL + A L +
Sbjct: 92 VLRLIKTPSKALQFFNWAP-ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNG 150
Query: 159 CPHSVD-VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
D F LI +Y K GL +ES + F VG PS+V+ N LL LLK
Sbjct: 151 TVKLEDRFFNSLIR-------SYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLK 203
Query: 218 LNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ V++EM G+ P+T+TFNIL FCKN VD+ F +++ DPDLV
Sbjct: 204 RGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLV 263
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
TYNTL+ C+ G++N A + M ++ N+ PD+VTYTTL+ G C + ++ EA +F
Sbjct: 264 TYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFE 323
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKE 393
MV +GL P+ ++YNTLI C+ K+ + K + +G G + PDT T ++ +
Sbjct: 324 EMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNA 383
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ-------DGY 446
G L AL + ++ V Y LI LCQ A L + + + DG
Sbjct: 384 GNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGC 443
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + Y + E LC+ A A + +++ R + LS ++ LI C G
Sbjct: 444 TPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLS-FKILIKGHCREGTFEAGYE 502
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ ML +PD + + LI+G + + A L K + +T +++++
Sbjct: 503 LLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLL 562
Query: 567 EDG 569
G
Sbjct: 563 AKG 565
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 151/346 (43%), Gaps = 42/346 (12%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIMYRRNVLPDLVT--YTTLMN 318
F E GF + +Y ++ + LN A +L+ I R N L + +L+
Sbjct: 105 FFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIR 164
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIY 377
K G +E+ Q+F+ M G+SP +V++N+L+ K G+ ++S+ EM+ G+
Sbjct: 165 SYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVT 224
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PDT+T I+++G+ K + E+ RF
Sbjct: 225 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCD------------------------- 259
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR--NIKPSLSTYRALICCF 495
P L YN L++ LC+ V A + + MV + N+ P + TY L+ +
Sbjct: 260 ----------PDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGY 309
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYD 554
C EA+ + +EM+ G+ P+ LI G C + ++K + + G I D
Sbjct: 310 CMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPD 369
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
T + N + N G+L+ +E+ ++ + L P++ T +I +L
Sbjct: 370 TCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNL 415
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 147/348 (42%), Gaps = 12/348 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---- 234
A+ G + ++ + F K + + +P + + L+ L + ++ Q+++E+
Sbjct: 379 AHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILL 438
Query: 235 ---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G P + + C+NG K ++ + G D +++ LI +C++G
Sbjct: 439 RDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTF 497
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+ L +M RR+ +PDL TY +L++GL ++G+ A+Q +M+ P+ +++++
Sbjct: 498 EAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSI 557
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
+ +G ES + M+ I + V+ G A +V L G
Sbjct: 558 LARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGY 617
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ + LI L + + A LL + +++ + ++E LCK ++A
Sbjct: 618 VVD---MEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFG 674
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
L E+V++ L L GR E V + + + + PD
Sbjct: 675 LYYELVEKGNNQPLRCLENLRVALEARGRL-EEVKFLSKRMPNKRQPD 721
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 214/451 (47%), Gaps = 40/451 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L + A +L E+ L+ C V+ F DL+ +
Sbjct: 210 PDAVLYQTVIHALVAQGGVAEAAMLLDEM--LLMGCAADVNTFNDLV-------LGLCGL 260
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC------------------- 224
G +RE+ + + + G PS+V+ FLL GL + D+
Sbjct: 261 GRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVI 320
Query: 225 ------------WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
++YE MG G P+ HT++IL H CK G L+++EE+G
Sbjct: 321 RGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCA 380
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++VTY+TL+ S+C+ G +DA + M + + Y ++ LCK+GK+ +A +L
Sbjct: 381 PNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRL 440
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G PDI +YNT+I+ C M+E++ + ++ G+ + T ++ +
Sbjct: 441 VQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLR 500
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR L L E+ G + Y+ LI ALC++ + +LLE + G P+
Sbjct: 501 NGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFS 560
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK V DAL L EM+++ + P + TY LI C +G + A++L++++
Sbjct: 561 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 620
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ PD +LI+ +C + ++ A LL
Sbjct: 621 NENVHPDIVTYNILISWHCKVRLLDDAAMLL 651
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 168/331 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + + L++GL KL ++ +EM G PN T++ L H FC+NG D
Sbjct: 343 GCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDA 402
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ +GF + YN +I + CK G+L+ A L + M + PD+ TY T++
Sbjct: 403 RAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYH 462
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC + EA +F ++ G+ + ++YNTLI A + G+ QE L EM+ +G D
Sbjct: 463 LCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLD 522
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ +++ KEG + ++ L+ E+ G+ + Y+ LI LC+ + A L +
Sbjct: 523 VISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSK 582
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P + YN L+ LCK AL L +++ + N+ P + TY LI C +
Sbjct: 583 EMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVR 642
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+A L+D+ + G++P+ + +++ +
Sbjct: 643 LLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 177/347 (51%), Gaps = 9/347 (2%)
Query: 151 ELVELV--KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
EL E++ K CP V + L+ K+G + + + + G P+IV+
Sbjct: 334 ELYEMMGSKGCPPDVHTYSILMH-------GLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ LL+ + D + ++M G N+ +N + + CK+G +D+ +++++
Sbjct: 387 STLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKS 446
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G PD+ TYNT+I C + +A +++R + V+ + +TY TL++ L + G+ +E
Sbjct: 447 QGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQE 506
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+L M+ G D++SYN LI A CKEG + S +LL EM+ GI P+ F+ +++
Sbjct: 507 GLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLIN 566
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K G++ AL L E+ G++ Y+ LI LC+ AA +LLE++ + P
Sbjct: 567 ELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 626
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ YN L+ CK + DA +L D+ + I P+ T+ ++ F
Sbjct: 627 DIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 194/470 (41%), Gaps = 68/470 (14%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
PS S N +L+ L + +C +Y M R + P T TF + C+ G
Sbjct: 137 AVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDA 196
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + G PD V Y T+I + +G + +A L M D+ T+ L+ G
Sbjct: 197 LALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK---------------------- 357
LC G+VREA +L RM+ +G P +V+Y L+ C+
Sbjct: 257 LCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVML 316
Query: 358 ---------EGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
EGK+ + LYEMMG+ G PD T I++ G K GR SA+ ++ E++
Sbjct: 317 NTVIRGCLTEGKLARATE-LYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEME 375
Query: 408 R-----------------------------------FGVSISRDIYDYLIVALCQDNRPF 432
G S++ Y+ +I ALC+D +
Sbjct: 376 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLD 435
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
AT L++ + G P + YN ++ LC D + +A + +++ + + TY LI
Sbjct: 436 QATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLI 495
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
GR E + L EML G D LI C E +V+++ ALL K
Sbjct: 496 HALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIK 555
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ SYN + N + G + +EL K L G P+ +T +I+ L K
Sbjct: 556 PNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 605
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 160/339 (47%), Gaps = 9/339 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++H L +F A++ML E+ E K C ++ + L+ ++ +
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEE--KGCAPNIVTYSTLLH-------SFCRN 396
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G+ ++ + L GF + N ++ L K +DQ ++ +EM G P+ T+
Sbjct: 397 GMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTY 456
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + C N +++ + EEG + +TYNTLI + + GR + L M
Sbjct: 457 NTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLL 516
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
D+++Y L+ LCKEG V + L MV +G+ P+ SYN LI CK GK+++
Sbjct: 517 HGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRD 576
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ G+ PD T ++ G K G +ALNL+ +L V Y+ LI
Sbjct: 577 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 636
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
C+ A LL++ G VP+ + ++++ +
Sbjct: 637 WHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVR 675
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 13/270 (4%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKV 183
S Y I++ L + K A +++ E+ + C + + +I C D
Sbjct: 418 SQGYNGIIYALCKDGKLDQATRLVQEMKS--QGCKPDICTYNTMIYHLCNND-------- 467
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L+ E+ FR ++ G + ++ N L++ LL+ + ++ EM G + ++
Sbjct: 468 -LMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISY 526
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L CK G+VD+ LE++ +G P+ +YN LI+ CK G++ DA L + M
Sbjct: 527 NGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 586
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + PD+VTY TL+NGLCK G A L ++ + + PDIV+YN LI +CK + +
Sbjct: 587 QGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDD 646
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ LL + + GI P+ T ++VQ + ++
Sbjct: 647 AAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 145/340 (42%), Gaps = 34/340 (10%)
Query: 294 AFYLYRIMYRR-NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A +L M RR V P +Y +++ L + +A L+ RM+ + P ++
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
A C+ G+ ++ +LL M +G PD Q ++ +G + A L+ E+ G +
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC--------- 463
+ ++ L++ LC R A L++R+ G +PS+ Y L++ LC+
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304
Query: 464 ----------------------DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+A A L + M + P + TY L+ C +GR
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTESYNA 560
G AV ++DEM E G P+ L++ +C + A A+L AK F + +++ YN
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSM-NSQGYNG 423
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +DG L + L + G P+ T MI+ L
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHL 463
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 204/406 (50%), Gaps = 2/406 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++VS N ++NG +D+ + ++ +M GI PN T+ I+ CK VD+ G
Sbjct: 202 PNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGV 261
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ ++G P++VTY LI Y G+ + + + M + PD TY L++ LCK
Sbjct: 262 FQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCK 321
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+GK EA +LF M+ +G+ PD+ Y ++ Y +G + E S L M+GNGI P+ +
Sbjct: 322 KGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYI 381
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ + K+ + A+++ ++++ G+S + Y LI ALC+ R A ++
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P++ ++ L+ LC D A L EMV++ I P++ + ++C C GR
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L+D M G PD LI G+C+ ++A LL + +YN +
Sbjct: 502 KAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL 561
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ + DG + + + L G P +T ++H L+K R+F
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFK--TRRF 605
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 203/423 (47%), Gaps = 8/423 (1%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE-LVKDCPHSVDVFQDLISCTEDC 176
++L P +Y ++ N+ A+++L + + V+ CP ++ + +I+
Sbjct: 158 SELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN----- 212
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ G + +++ F D G P++V+ +++GL K +D+ V+++M G+
Sbjct: 213 --GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+ L H + G +V L+++ G +PD TY L+ CKKG+ +A
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L+ M R+ + PD+ Y +++G +G + E H MV G+SP+ +N + A+
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K+ + E+ + +M G+ P+ ++ K GR+ A ++ GV+ +
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++ L+ LC ++ A L + G P++ +N +M +LC V A L D M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+P + +Y ALI C +G++ EA L+D ML G+ P+ L++GYC + +
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570
Query: 537 NKA 539
+ A
Sbjct: 571 DDA 573
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 223/493 (45%), Gaps = 57/493 (11%)
Query: 154 ELVKDCPHSV--DVF--QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
+++DC V DVF L+ C + ++G + F F L G++ + V
Sbjct: 81 RMIRDCCSKVAPDVFTYSILVGC-------FCRMGRLEHGFAAFGLILKTGWRVNDVVVV 133
Query: 210 F-LLNGLLKLNCIDQCWQVY-EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
LL GL + + V M +G PN ++N L FC ++ L +
Sbjct: 134 NRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMA 193
Query: 268 E---EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+ P+LV+YNT+I+ + +G+++ A+ L+ M + + P++VTYT +++GLCK
Sbjct: 194 DGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQ 253
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAY----------------------------- 355
V A +F +M+ +G+ P+IV+Y LI Y
Sbjct: 254 VVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYG 313
Query: 356 ------CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
CK+GK E++ L M+ GI PD II+ GY +G L + + +
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN 373
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+S + I++ + A + A + ++ Q G P++ Y L+++LCK V DA
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDA 433
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L ++M++ + P++ + +L+ C I + +A L EM+ G+ P+ ++
Sbjct: 434 ELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN---MFAEDGDLSKLMELQKRFLRLGF 586
C E V KA+ L+ + D SYNA+ + + + SKL+++ L +G
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDI---MLSVGL 550
Query: 587 APNNLTCKYMIHS 599
PN T ++H
Sbjct: 551 KPNECTYNTLLHG 563
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 198/422 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+ +G +E + ++ G +P + LL+ L K + ++++ M R GI P
Sbjct: 283 GYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKP 342
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + I+ H + G + +++ FL+ + G P+ +N + ++ KK + +A ++
Sbjct: 343 DVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIF 402
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P++V Y TL++ LCK G+V +A F++M++ G++P+IV + +L++ C
Sbjct: 403 NKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTI 462
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +++ L +EM+ GI+P+ I+ EGR++ A L+ ++R G Y
Sbjct: 463 DKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISY 522
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C + A+ LL+ + G P+ YN L+ C+ + DA + EM+
Sbjct: 523 NALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS 582
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P + TY ++ R EA L M+ SG +++NG V++
Sbjct: 583 NGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDE 642
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A + K D ++N + +DG M L G P+ T + +
Sbjct: 643 ALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAE 702
Query: 599 SL 600
+L
Sbjct: 703 NL 704
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 211/461 (45%), Gaps = 9/461 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP S Y +I+H A S +M L +V + +++ C A+
Sbjct: 340 IKPDVSIYGIILHGYATKGALS---EMHSFLDLMVGNGISPNHYIFNIVFC------AFA 390
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K +I E+ F K G P++V+ L++ L KL +D + +M G+ PN
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F L + C +K ++ +G P++V +NT++ + C +GR+ A L +M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R PD+++Y L+ G C GK EA +L M+ GL P+ +YNTL+ YC++G++
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ S+ EM+ NGI P T I+ G K R A L + + G S Y+ +
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L ++N A + + + + +N ++ +L K DA+ L + +
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P ++TYR + G E + EM +SG P+S + L+ + D+++A A
Sbjct: 691 VPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGA 750
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L +K + + + + ++F+ + +K + + FL
Sbjct: 751 YLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFL 791
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 162/336 (48%), Gaps = 7/336 (2%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD+ TY+ L+ +C+ GRL F + ++ + + D+V L+ GLC +V EA
Sbjct: 92 PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151
Query: 332 -LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY----PDTFTCQII 386
L RM G +P++VSYNTL+ +C E + +E+ LL+ MM +G P+ + +
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLH-MMADGQVRSCPPNLVSYNTV 210
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ EG++ A NL +++ G+ + Y +I LC+ A + +++ G
Sbjct: 211 INGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ Y L+ + + + EM ++P TY L+ C G+ EA
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L D M+ G+ PD I ++++GY + +++ + L + +N VF FA
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + M++ + + G +PN + +I +L K
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCK 426
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/521 (26%), Positives = 246/521 (47%), Gaps = 46/521 (8%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y ++++ + S A+ ++E + C +V F +I+ A+ K
Sbjct: 298 EPNAFAYNIVINACCIRGRTSDALAWFNLMIE--RGCNPTVVTFNTVIN-------AFCK 348
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ K F ++GF P+ + N L+NG +K+ IDQ +YEEM + GI P+ T
Sbjct: 349 EGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT 408
Query: 243 FNILTHV-----------------------------------FCKNGDVDKVNGFLEKIE 267
FNIL C G +D+ FL +
Sbjct: 409 FNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDML 468
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E+G P ++ +N++I++Y + G + AF Y++M + P T ++L+ GL G+++
Sbjct: 469 EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 528
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +L +M+ +GLS + +++ L+ + K G + ++SL EM GI+PD +
Sbjct: 529 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 588
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G K+G + A N+ +E+ R G+ + Y+ LI C+ + A L + + G +
Sbjct: 589 DGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLL 648
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + N ++ LCK + A+ + +M + P + TY LI +C A +L
Sbjct: 649 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 708
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
++ M SG PD + I+G+C + +N+A +L + +T +YN++ N
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS 768
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK-GMERK 607
D L + M L R L++ F PN +T ++ +K GM +
Sbjct: 769 D-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPER 808
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 3/447 (0%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
+LVE + H V++ S + A+V + ++ + + +VG +PS
Sbjct: 180 DLVEFMWRGHH---VYESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAI 236
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L LL++ W++++++ R G P +TF+ + FC+ G + L + +
Sbjct: 237 LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH 296
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+P+ YN +I++ C +GR +DA + +M R P +VT+ T++N CKEG V EA
Sbjct: 297 CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 356
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+LF + G SP+ + YNTL+ Y K ++ ++ L EM GI PD T I+V G+
Sbjct: 357 KLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGH 416
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K GR L+ ++ G+ R ++D + LC R A L + + G PS+
Sbjct: 417 YKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSI 476
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+N ++ + + A MV + PS ST +L+ GR EA L+ +
Sbjct: 477 IAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQ 536
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+E G+ ++ VL++ + DV A++L G ++ D +++A + ++ G
Sbjct: 537 MIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGL 596
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + LR G PNN +I
Sbjct: 597 VEEAYNVFLEMLRKGLIPNNFAYNSLI 623
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/481 (26%), Positives = 221/481 (45%), Gaps = 44/481 (9%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L + P S + + V L W + AM+ L +++E K S+ F +I+ A
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE--KGLSPSIIAFNSVIA-------A 485
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + GL ++F+ ++ + G PS +C+ LL GL + + ++ +M G+ N
Sbjct: 486 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVN 545
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
F +L F K GDV ++E G PD+V ++ I K+G + +A+ ++
Sbjct: 546 NMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFL 605
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R+ ++P+ Y +L+ G CK GK+ EA +L M HRGL PDI + N +I CK+G
Sbjct: 606 EMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 665
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M+ + ++ +M G+ PD T ++ GY K +++A NLV + G + Y+
Sbjct: 666 RMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 725
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I C R A +L+ + G VP+ YN ++ +C D + A++L ++
Sbjct: 726 IRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS-DILDRAMILTARLLKM 784
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P++ T A L+ + + GM P+ R L+ G+ + +
Sbjct: 785 AFVPNVVT----------------ANLLLSQFYKQGM-PE----RTLMWGHKL------S 817
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR-LGFAPNNLTCKYMIH 598
E F ++I D + ED D S++ + FL L + + C+Y H
Sbjct: 818 EIPYAFDEITYKIMDKAHH------ILEDADFSRVTSAKSLFLDFLMYITYDYFCRYRPH 871
Query: 599 S 599
S
Sbjct: 872 S 872
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 217/456 (47%), Gaps = 39/456 (8%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ +VG + + R + ++ N +++GL K +D+ +V EEM GI
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND-AFY 296
P+ +T++IL H FCK GDV+K +E+++ +P LV+Y++L CKK RL+D +
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK-RLSDISLD 416
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++R + D Y+ L+ G C +G + AH+L MV L+PD ++ +L+ +C
Sbjct: 417 IFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFC 476
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + M+ GI P TC +I+ + +EGR+ ALNL+ E+Q G+ +
Sbjct: 477 KMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLF 536
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ +I LC++ + A L + + +PS+ +Y+ L++ K + AL+L M
Sbjct: 537 TYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARM 596
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD--------SQICRV--- 525
+ + P + Y LI C R EA +L +M E+GM PD + CR+
Sbjct: 597 LKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDM 656
Query: 526 ------------------------LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
L++GYC ++ A+ L+ +K D +YN +
Sbjct: 657 RKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVL 716
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
G+L K +E+ G P+++T YM+
Sbjct: 717 IAAHRRRGNLDKALEMLNEMKENGVLPDHMT--YMM 750
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 227/479 (47%), Gaps = 14/479 (2%)
Query: 129 YCLIVHILAWNNKFSF-AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y L+ I+ + NK + A ++ L+E KD SV VF LI + ++
Sbjct: 144 YALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIK-------VFAANSMLE 196
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
+ F + G + S SCNFLL L + N + ++EEM G PN T+ I+
Sbjct: 197 NAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMM 256
Query: 248 HVFCKN----GDVD--KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ +CK D+D + LE++E G P +VTY+T I C+ G + A R +
Sbjct: 257 NFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSL 316
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N L ++ Y +++GLCK+G++ EA ++ M G+SPD+ +Y+ LI +CK+G +
Sbjct: 317 ISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDV 376
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L+ EM + + P + + G K+ +L++ +L G + Y L
Sbjct: 377 EKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSIL 436
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C +A L+E + ++ P + L+ CK +AL + M++ I
Sbjct: 437 IKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGI 496
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
PS++T +I C GR EA++LM+EM G+ P+ +IN C E+ +A
Sbjct: 497 LPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALE 556
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K+ + Y+ + + FA+ + K + L R L++G P+ + +I+ L
Sbjct: 557 LFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 201/431 (46%), Gaps = 11/431 (2%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL-IR 187
Y I+H L + A+K+L E+ K C S DV+ I C V+ GL +
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEM----KSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E K +PS+VS + L +GL K D ++ ++G G + ++IL
Sbjct: 384 EEMKY------SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILI 437
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FC GD+D + +E++ PD + +L+ +CK G +A + +M +L
Sbjct: 438 KGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGIL 497
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P + T +++ C+EG+V EA L + M +G+ P++ +YN +I CKE K + + L
Sbjct: 498 PSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALEL 557
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ + P ++ G+ K+ AL L + + GV+ Y LI LC
Sbjct: 558 FPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCH 617
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+R A +L +++ ++G P Y ++ C+ + A L +EM+ R P++ T
Sbjct: 618 RSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVT 677
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +L+ +C + R A L+DEM G+ PD VLI + +++KA +L
Sbjct: 678 YTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMK 737
Query: 548 KKFQIYDTESY 558
+ + D +Y
Sbjct: 738 ENGVLPDHMTY 748
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 205/394 (52%), Gaps = 2/394 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL + K FR+ +++G P+++ + L+NGL ++ + + +++EM GI N
Sbjct: 91 KDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVI 150
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L H C+ G + ++ EG PD+VT+ TLI KKG++ +A+ ++ +M
Sbjct: 151 TYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM 210
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ P++VTY +L+NGLC ++ A +LF MV RG+ D++SYNTLI YC GK
Sbjct: 211 IKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKT 270
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ +L +M + P T I+++ + GR+ +A L +Q G S S D Y L
Sbjct: 271 EEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVL 330
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++ A + + Y PS+ IY+ L+ + + A+ + DE+ +
Sbjct: 331 LDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGL 390
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-E 540
P++ TY +I C G+ EA L +M ESG D +I G+ E V KA E
Sbjct: 391 VPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAME 450
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
L K F D+ + V N++A D S+L
Sbjct: 451 FLKRMREKNFSPNDSVTLMLV-NLYAADAQSSEL 483
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 198/391 (50%), Gaps = 5/391 (1%)
Query: 205 IVSCNFLLNGLL-----KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
I S NF GL+ K + +++ EM +GICPN ++ L + C+ G + +
Sbjct: 74 ICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREA 133
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ +G +++TYN+LI + C+ G +A + M +LPD+VT+TTL++
Sbjct: 134 VNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDH 193
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L K+GKV+EA+++F M+ +G +P+IV+YN+L+ C +M + L M+ GI D
Sbjct: 194 LSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKID 253
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ ++ GY G+ A+ L ++Q ++ S Y L+ AL Q+ R A L
Sbjct: 254 VISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFN 313
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G PSL+ Y L++ LCK + +A+ + + KPS+ Y LI
Sbjct: 314 NMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQAR 373
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R A+ + DE+ G++P+ ++ING C E + +AE L + D S+N
Sbjct: 374 RWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFN 433
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ F ++ + K ME KR F+PN+
Sbjct: 434 FIIRGFLQENQVQKAMEFLKRMREKNFSPND 464
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 187/405 (46%), Gaps = 4/405 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G+QP++V+ + L+ G+ + +++++M R G + + L + K +
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ E + TY +I S CK G ++R M + P+++ Y++L+NG
Sbjct: 64 VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ GK+REA LF MV +G+ ++++YN+LI A C+ G +E+ +M+G GI PD
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ K+G++ A + + + G + + Y+ L+ LC ++ A L E
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G + YN L+ C +A+ L +M + PS++TY L+ G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY--DTES 557
R A L + M G P VL++G C K+ EA+ F + K Y
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLC--KNGCIEEAIDVFRSLKSIKYKPSIRI 361
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y+ + + ME+ +G PN +T MI+ L K
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCK 406
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 9/375 (2%)
Query: 156 VKDCPHSVDVFQDLISCTEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
V +V++F +++S N A + GL +E+ +TF + + G P +V+
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
L++ L K + + ++++E M + G PN T+N L + C + +D E +
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E G D+++YNTLI+ YC G+ +A L+R M + P + TYT L+ L + G++R
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A +LF+ M G SP + +Y L+ CK G ++E+ + + P I++
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G + R SA+ + E+ G+ + Y+ +I LC++ + A L ++ + G
Sbjct: 367 GGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCE 426
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE-AVS 506
+N ++ + + V A+ M ++N P+ S L+ + +S E +
Sbjct: 427 QDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSELPNN 486
Query: 507 LMDEMLESGMLPDSQ 521
+ E+++ L Q
Sbjct: 487 FLHELVQKKTLKTQQ 501
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 154/335 (45%)
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+ G+ P+LVT +TL+ C +G++ DA L+ M R D++ Y L+N L K + R
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A +L RM+ S + +Y +I + CK+G + + EM+ GI P+ ++
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G + G+L A+NL E+ G+ + Y+ LI A C+ AT ++ +G +
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + + L++ L K V +A + + M+ + P++ TY +L+ C + AV L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M+E G+ D LINGYC +A L + +Y + +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+G + EL G +P+ T ++ L K
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCK 336
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%)
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
M +G P+ T +V+G EG+++ AL L ++ R G +Y YLI AL + +
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L R+ + + Y +++SLCK L + EM++ I P++ Y +L
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C +G+ EAV+L DEM+ G+ + LI+ C +A +
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D ++ + + ++ G + + ++ + ++ G APN +T +++ L
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/569 (25%), Positives = 256/569 (44%), Gaps = 67/569 (11%)
Query: 95 ISRVLLRCQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
I V+L+ Q D L FF W ++ + T+ ++ LA N S +L+
Sbjct: 66 IRSVILQNQVGDPKRLLNFFYWSQHKMGTS-TAQQDLDVLSALAVNLCNSNWYGPASDLI 124
Query: 154 E-LVKDCPHSVDVFQDLISCTEDCNWA------------YVKVGLIRESFKTFRKTLDVG 200
+ ++++ + V ++ C CN + Y K+G + E+ F +
Sbjct: 125 KCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE 184
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD----- 255
F+PS++SCN LL LLK N ++ W+V++ M + P+ +T+ + CK G+
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244
Query: 256 -----------------------VDK------------VNGF-LEKIEEE---------- 269
VDK +NGF +EK E
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304
Query: 270 -GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P+ +TYN LI + ++G + AF + M + +L+ + TL+NG+CK GK+ +
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A ++ M+ +G+ PD +Y+ LI +C+ M + LL EM + P T +I+
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G + G L ++ E+ G+ + +Y L+ A ++ R + +LER+ + G +P
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ YN L+ CK + +A EM++R ++P+ TY A I + G A
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 544
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EML G+LP+ I LI G+C E +V +A ++ F + + D ++Y+ + + + +
Sbjct: 545 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
G + + + G PN T +I
Sbjct: 605 GKMHEAFGIFSELQEKGLLPNAFTYNSLI 633
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 237/479 (49%), Gaps = 10/479 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ PT Y +I++ L +L E+V + P++V V+ L++ A+
Sbjct: 411 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMV-MNGLKPNAV-VYTTLMT-------AH 461
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + ES + + G P + N L+ G K +++ EM + PN
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
HT+ + K G+++ + + ++ G P++ Y LI +CK+G + +AF ++R
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ R VL D+ TY+ L++GL + GK+ EA +F + +GL P+ +YN+LI CK+G
Sbjct: 582 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 641
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ LL EM GI PD T I++ G K G + A NL +++ G++ + Y
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 701
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C+ P AA LLE + G P IYN ++ CK + AL L EM+++
Sbjct: 702 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++S + LI +C G+ EA L++EM+E +P+ LI+ C + +A+
Sbjct: 762 FASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAK 820
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L ++ + ++Y ++ + + G++S++ L + + G P+ +T MI +
Sbjct: 821 RLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 879
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 188/361 (52%), Gaps = 1/361 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + + + F + L G P++ L+ G K + + + V+ + +
Sbjct: 530 GYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQ 589
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+++L H +NG + + G +++E+G P+ TYN+LIS CK+G ++ A L
Sbjct: 590 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLL 649
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+VTY L++GLCK G++ A LF + RGL+P+ V+Y ++ YCK
Sbjct: 650 EEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKS 709
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ LL EM+ G+ PD F +I+ KE + AL+L E+ G + S +
Sbjct: 710 KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSF 768
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ + A LLE + + ++P+ Y L++ CK + +A L EM +
Sbjct: 769 NTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE 828
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ P+ TY +L+ + IG E +L +EM+ G+ PD V+I+ YC E +V +
Sbjct: 829 RNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVME 888
Query: 539 A 539
A
Sbjct: 889 A 889
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 230/505 (45%), Gaps = 46/505 (9%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCN 177
D + P Y ++++ + A ML E++++ +K P + + D
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALID--------- 319
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+++ G I ++F+ + + G + +++ N LLNG+ K +++ ++ +EM G+
Sbjct: 320 -GFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVE 378
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P++ T+++L C+ ++ + L+++++ P ++TY+ +I+ C+ G L +
Sbjct: 379 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 438
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R M + P+ V YTTLM KEG+V E+ + RM +G+ PD+ YN+LI +CK
Sbjct: 439 LREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCK 498
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+M+E+++ L EM+ + P+ T + GY K G + A E+ GV + I
Sbjct: 499 AKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGI 558
Query: 418 YDYLIVALCQDNRPFAATS-----LLERIGQD---------------------------- 444
Y LI C++ A S L R+ QD
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618
Query: 445 --GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G +P+ YN L+ CK +V A L +EM + I P + TY LI C G
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIE 678
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A +L D++ G+ P+ +++GYC K+ A LL + D YN +
Sbjct: 679 RAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFA 587
N ++ K ++L + L GFA
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFA 763
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 2/403 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++++ + ++NGL + + + EM G+ PN + L K G V++
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LE++ E+G PD+ YN+LI +CK R+ +A M R + P+ TY ++G K
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 533
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ A + F+ M+ G+ P++ Y LI +CKEG + E+ S+ ++ + D T
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ G + G++ A + ELQ G+ + Y+ LI C+ A+ LLE +
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P + YN L++ LCK + A L D++ R + P+ TY A++ +C
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A L++EML G+ PD+ I V++N C E+ KA L +K T S+N +
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNTLI 772
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI-HSLWKGM 604
+ + G L + L + + F PN++T +I H+ GM
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 7/385 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + E+F FR L + + + L++GL + + + + ++ E+ G+ P
Sbjct: 565 GHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP 624
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L CK G+VDK + LE++ +G +PD+VTYN LI CK G + A L+
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ R + P+ VTY +++G CK A QL M+ RG+ PD YN ++ CKE
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE 744
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +++ L EM+ G + T + +++GY K G+L A +L+ E+ + Y
Sbjct: 745 EKFEKALDLFQEMLEKG-FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTY 803
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L + + +P+ + Y L+ ++++ L +EMV
Sbjct: 804 TSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVA 863
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS------QICRVLINGYCM 532
+ I+P TY +I +C G EA L DE+L GM S C V+ G+ +
Sbjct: 864 KGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQI 923
Query: 533 EKDVNKAEALLGFFAKKFQIYDTES 557
++++A +L K + +T S
Sbjct: 924 AGNMDEAAEVLRSMVKFGWVSNTTS 948
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 206/422 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A +K L++E+ G P+ + N L+ G +L + + +V E M R + P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+N+L + FC +G +D+ +++E+ PD+VTYNTLI + ++ + L
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V + VTY ++ +CK+G + EA +M GLSPD V+YNTLI AYCK
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM ++ ++ EM G+ DT+T I+ E +L A NL+ + G + Y
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSY 496
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI+ +D + A +L + + + +PS YN ++ LC+ V A+ +EM++
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLE 556
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P +TY +I FC G +A +EM+E+ PD C +L+ G C E + K
Sbjct: 557 NGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEK 616
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K + D +YN + + ++G +L P+ T K +I
Sbjct: 617 ALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIA 676
Query: 599 SL 600
+L
Sbjct: 677 AL 678
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 230/504 (45%), Gaps = 75/504 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL---NCIDQCWQVYEEMGRIG 235
AYV++ + + F K + ++P++++CN L+N L++ + I QV ++ ++G
Sbjct: 149 AYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLG 208
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT--------------- 280
+ PNT++FNIL + +C V ++ K+ E G PD V+YNT
Sbjct: 209 VVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEAR 268
Query: 281 --------------------LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L+ YC+ G L +A + IM R N+LP + TY L+NG
Sbjct: 269 DLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGF 328
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA-------------------------- 354
C +GK+ EA ++ M + PD+V+YNTLI
Sbjct: 329 CNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNA 388
Query: 355 ---------YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
CK+G M E+ + L +M NG+ PD T ++ Y K G++ A ++ E
Sbjct: 389 VTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDE 448
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G+ I + ++ LC + + A +LL + GY+ Y L+ K +
Sbjct: 449 MTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEK 508
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
AL L DEM +R I PS TY ++I C + +A+ ++EMLE+G++PD +
Sbjct: 509 GDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNI 568
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+I+G+C+E +V KA + D + N + +G L K ++L + G
Sbjct: 569 IIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKG 628
Query: 586 FAPNNLTCKYMIHSLWKGMERKFQ 609
+ +T +I SL K E KF+
Sbjct: 629 KDIDVVTYNTIISSLCK--EGKFE 650
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 195/430 (45%), Gaps = 10/430 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y ++GL++E+ K P++ + N L+NG ID+ +++ +EM ++ + P
Sbjct: 292 GYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLP 351
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + D +V +E+++++G + VTYN ++ CKKG + +A
Sbjct: 352 DVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTL 411
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD VTY TL+ CK GK+ +A ++ M +GL D + NT++ C E
Sbjct: 412 DKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVE 471
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ E+ +LL G D + I++ GY K+ + ALNL E++ + S Y
Sbjct: 472 KKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITY 531
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LCQ + A L + ++G VP YN ++ C +V A +EM++
Sbjct: 532 NSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIE 591
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
KP + T L+ C G +A+ L + ++ G D +I+ C E
Sbjct: 592 NLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFEN 651
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF----------LRLGFAP 588
A LL K D +Y + + G + + E + L+LG
Sbjct: 652 AYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQ 711
Query: 589 NNLTCKYMIH 598
N LT + H
Sbjct: 712 NVLTSEVSEH 721
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 137/286 (47%), Gaps = 23/286 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G+ VS L+ G K D+ +++EM I P+T T+N + C++ VD+
Sbjct: 488 GYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQA 547
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ E G PD TYN +I +C +G + AF + M PD+ T L+ G
Sbjct: 548 IDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRG 607
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+EG + +A +LF+ +V +G D+V+YNT+I + CKEGK + + LL EM + PD
Sbjct: 608 LCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPD 667
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI----------------YDYLIV 423
+T ++I+ GR+ A +++ G+ +++ +D+ +
Sbjct: 668 QYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSI 727
Query: 424 A-------LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
A LC ++ A L + ++G + Y LME L K
Sbjct: 728 AYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIK 773
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 156/332 (46%), Gaps = 3/332 (0%)
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---EGKVRE 328
+P +T I +Y + + + A ++ M R N P+L+T TLMN L + +
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A Q+ + G+ P+ S+N LI+ YC E K++++ + +M G PDT + I+
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K L A +L+++++ G+S ++ Y+ L+ C+ AT ++E + ++ +P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ YN L+ C + +A ++DEM N+ P + TY LI S E SL+
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EM + G+ ++ +++ C + ++ +A L + D +YN + + +
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + K + G + T ++H L
Sbjct: 437 GKMGKAFRMMDEMTSKGLKIDTWTLNTILHCL 468
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 58/254 (22%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV--- 259
PS ++ N ++ GL + +DQ EM G+ P+ T+NI+ H FC G+V+K
Sbjct: 526 PSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQF 585
Query: 260 -------------------------NGFLEK-------IEEEGFDPDLVTYNTLISSYCK 287
G LEK + +G D D+VTYNT+ISS CK
Sbjct: 586 HNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCK 645
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD--- 344
+G+ +A+ L M + + PD TY ++ L G+++EA + +MV G+ D
Sbjct: 646 EGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNL 705
Query: 345 --------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
++Y+ I C + K +++ L E+ G+ + +T
Sbjct: 706 KLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYL 765
Query: 385 IIVQGYGKEGRLLS 398
+++G K + S
Sbjct: 766 NLMEGLIKRRKSTS 779
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 88/226 (38%), Gaps = 34/226 (15%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ-DLISCTEDCNWAYVK 182
P + Y +I+H A + E++E ++F+ D+ +C +
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKAFQFHNEMIE---------NLFKPDVYTCNILLR-GLCR 610
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G++ ++ K F + G +V+ N +++ L K + + + EM + P+ +T
Sbjct: 611 EGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYT 670
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEG-----------------------FDPDLVTYN 279
+ ++ G + + F K+ E G FD + Y+
Sbjct: 671 YKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYS 730
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
I+ C + + DA +L+ + + V + TY LM GL K K
Sbjct: 731 DQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 248/530 (46%), Gaps = 24/530 (4%)
Query: 84 KPLLP-HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
+ LLP H+ A +++ Q+D + AL FN K++ K T+S Y IV L + +F
Sbjct: 3 RTLLPKHVAA------VVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEF 56
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
K+L E+ E V + + + + Y + G ++E+ TF +
Sbjct: 57 EEMEKLLSEMRENVNNALLEGAYIEAMKN--------YGRKGKVQEAVDTFERMDFYNCD 108
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ S N ++N L++ +Q +VY M G+ + +T+ I FCK
Sbjct: 109 PSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRL 168
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + E G D + V Y T+++ G + A L+ M R + PD+V + L++ LCK
Sbjct: 169 LRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCK 228
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ---------ESKSLLYEMMG 373
+G V E+ +L +++ RG+ P++ ++N + C+EG + E++ L +M+
Sbjct: 229 KGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G PD T I+ GY K+G + A ++ + G Y LI C+D P
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A ++ + G PS+ +YN L++ L + + AL L +EM + P++ TY +I
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVIN 408
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +G +A L+D+ + G PD LI+GYC + ++ A ++ +
Sbjct: 409 GLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTP 468
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +YN + N + G ++ME+ K G PN +T ++ SL K
Sbjct: 469 DVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 203/410 (49%), Gaps = 10/410 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV--- 259
P +V+ N L++ L K + + ++ ++ + G+CPN TFNI C+ G +D+
Sbjct: 214 PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRN 273
Query: 260 ------NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
+L K+ GF+PD +TYN++I YCKKG + DA + + + PD TY
Sbjct: 274 SRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+L+NG CK+G A +F + +GL P IV YNTLI ++G + + L+ EM
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
NG P+ +T +++ G K G + A +LV + G Y+ LI C+ + +
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDS 453
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
AT ++ R+ G P + YN L+ LCK + + + M ++ P++ TY ++
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI- 552
C + EAV L+ EM G+ PD L G+C D++ A L K++ +
Sbjct: 514 SLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVC 573
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ T +YN + + F+E +++ M+L G P+N T + +I K
Sbjct: 574 HTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCK 623
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 175/343 (51%), Gaps = 1/343 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + F+ L G +PSIV N L+ GL + I Q+ EM G P
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N++ + CK G V + ++ +G PD+ TYNTLI YCK+ +L+ A +
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ + + PD++TY TL+NGLCK GK E ++F M +G +P+I++YN ++ + CK
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDI 417
K+ E+ LL EM G+ PD + + G+ K G + A L +++ + V +
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTAT 578
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ ++ A + A L + G P Y +++ CK ++ E +
Sbjct: 579 YNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENM 638
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
++ PSL+T+ ++ C C + EAV ++ ML+ G++P++
Sbjct: 639 EKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPET 681
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 219/469 (46%), Gaps = 24/469 (5%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
YC +V L + + A ++ E++ CP V F L+ K GL+ E
Sbjct: 184 YCTVVAGLYDSGEHDHARELFDEMLARCL-CPDVV-AFNKLVH-------VLCKKGLVFE 234
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID---------QCWQVYEEMGRIGICPN 239
S + K L G P++ + N + GL + +D + + +M G P+
Sbjct: 235 SERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPD 294
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N + +CK G V N L+ +GF PD TY +LI+ +CK G + A +++
Sbjct: 295 DLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFK 354
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ + P +V Y TL+ GL ++G + A QL + M G P+I +YN +I CK G
Sbjct: 355 DGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMG 414
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ L+ + + G PD FT ++ GY K+ +L SA +V + G++ Y+
Sbjct: 415 CVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYN 474
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+ + + + + + G P++ YN +++SLCK V +A+ L EM +
Sbjct: 475 TLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES-GMLPDSQICRVLINGYCMEKDVNK 538
+KP + ++ L FC IG A L M + + + ++++ + + ++N
Sbjct: 535 GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNM 594
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK-----LMELQKRFL 582
A L D +Y V + F + G++++ L ++KRF+
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI 643
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 8/219 (3%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPNTHTFNILTHVFCKNGDVDK 258
G +P +VS L G K+ ID +Q++ M + +C T T+NI+ F + +++
Sbjct: 535 GLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNM 594
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLM 317
++ G DPD TY +I +CK G + + +L M +R +P L T+ ++
Sbjct: 595 AMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR-FIPSLTTFGRVL 653
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
N LC + KV EA + H M+ +G+ P+ V NT+ A + K+ + +L E + +
Sbjct: 654 NCLCVKDKVHEAVGIIHLMLQKGIVPETV--NTIFEA---DKKVVAAPKILVEDLLKKGH 708
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+T +++ G + L L V L R S + D
Sbjct: 709 IAYYTYELLYDGIRDKKILKKRLPTVNSLHRGASSSAVD 747
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/563 (26%), Positives = 256/563 (45%), Gaps = 54/563 (9%)
Query: 59 NKIVDLICSSLKKGD-SHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS---ALTFFN 114
N+ VD +CS + KG +L ++N L + I +VLL+ + FF
Sbjct: 8 NQFVDSVCSIVVKGHWGNLLKVKNA-----SALTSSTIHKVLLQLSLYGYGLSHSFPFFK 62
Query: 115 WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
W+ + + ++HIL + F A +L ++ KD S V L+ +
Sbjct: 63 WLDSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAH--KDFLSSPSVLSTLVRTHD 120
Query: 175 D-------CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ +W Y K + +++ + F + +P + +C LLN LLK
Sbjct: 121 NQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMV 180
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W++Y+ M ++G+ PN + +N L H K+GDV++ L +++ +G D+ TYNTL+S
Sbjct: 181 WKIYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSL 240
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR--------- 335
YCKKG +A + M R + D+V+Y +L+ G CKEG++REA ++F
Sbjct: 241 YCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNATPNHV 300
Query: 336 ------------------------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
M +GL P +V+YN+++ C++G+++++ LL EM
Sbjct: 301 TYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEM 360
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ D TC ++ Y K G L SAL ++ G+ Y LI C+ N
Sbjct: 361 SERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNEL 420
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
+A L+ + G+ PS Y+ +++ K D++ L L DE + R I +S YRAL
Sbjct: 421 ESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRAL 480
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I C + R A L M G+ +S I + Y +V+ A ++L A++
Sbjct: 481 IRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRL 540
Query: 552 IYDTESYNAVFNMFAEDGDLSKL 574
+ + Y A + +S++
Sbjct: 541 MITVKLYRCFSTSDANENKVSQI 563
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 19/369 (5%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS-----------------YCKK 288
+ H+ ++ LEKI + F +TL+ + Y K
Sbjct: 80 MIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQVLSWLVIHYAKS 139
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
DA ++ M V P L T L+N L K+G +++ RMV G+ P+I Y
Sbjct: 140 KMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIY 199
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N L A K G ++ ++ LL EM G+ D FT ++ Y K+G AL++ ++R
Sbjct: 200 NCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMER 259
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+++ Y+ LI C++ R A + I P+ Y L++ CK + + +
Sbjct: 260 EGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHVTYTTLIDGYCKTNELEE 317
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL + M + + P + TY +++ C GR +A L++EM E + D+ C LIN
Sbjct: 318 ALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLIN 377
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
YC D+ A + D +Y A+ + F + +L EL L GF P
Sbjct: 378 AYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTP 437
Query: 589 NNLTCKYMI 597
+ T +++
Sbjct: 438 SYCTYSWIV 446
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 97/251 (38%), Gaps = 48/251 (19%)
Query: 382 TCQIIVQGYGKEGRLLSALN-------------LVVELQRFGVSISRDIYDYL------- 421
C I+V+G+ G LL N L + L +G+S S + +L
Sbjct: 14 VCSIVVKGHW--GNLLKVKNASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWLDSIPHYS 71
Query: 422 --------IVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMES------------- 459
++ + +++ F A +LE+I ++ S + + L+ +
Sbjct: 72 HSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQVLSW 131
Query: 460 ----LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
K DA+ + ++M +KP L L+ G + + M++ G
Sbjct: 132 LVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVG 191
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++P+ I L + DV +AE LL K + D +YN + +++ + G + +
Sbjct: 192 VVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEAL 251
Query: 576 ELQKRFLRLGF 586
+Q R R G
Sbjct: 252 SIQNRMEREGI 262
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 196/415 (47%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ K F + + P++ + ++ L +L + +++EM PN HT+ +
Sbjct: 290 VDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTV 349
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L C++ + D L + E+G P +VTYN LI YCKKG A + +M N
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P+ TY L+ G C+ + +A L H+M+ R L P++V+YN LI CKEG + +
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL M +G+ PD +T + + K G + A +L L+ G+ + IY LI
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ + LL+++ G VP+ YN L++ CK + +A LL D M+ R+I+P+
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY LI +A + D+ML +G PD I I+ YC + AE L+
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K + DT Y + + G + + KR +G P+ T +I L
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 250/567 (44%), Gaps = 51/567 (8%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
LK L+P + IS L D +AL FFNW+ K ++ +++IL N
Sbjct: 68 LKNLIPSIAPSHIS-ALFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYL 126
Query: 143 SFAMKMLCELV-------------ELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIR 187
A M ++ E+++ VD F+ ++ C + +I
Sbjct: 127 RIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMID 186
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E + + LD P+I + N ++NG KL + + ++ + G+ +T T+ L
Sbjct: 187 EMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLI 246
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+C+N +VD N + +G + V+Y LI +C+ R+++A L+ M+ N
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P + TYT ++ LC+ G+ EA +F M + P++ +Y LI + C++ ++K +
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L M+ G+ P T ++ GY K+G SAL ++ ++ S + Y+ LI+ C+
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426
Query: 428 DNRPFAATSLLER-----------------------------------IGQDGYVPSLEI 452
A SLL + + + G VP
Sbjct: 427 GKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWT 486
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ +++LCK V +A L + + ++ IK + Y LI +C +G+ + L+D+ML
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+G +P+S LI+GYC EK+ +A L+ K+ ++Y + + +D +
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ ++ + L G P+ IH+
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHA 633
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 181/428 (42%), Gaps = 48/428 (11%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V AL F+ + D PT Y +I+ L + + A+ M E+ E K C
Sbjct: 285 CEARRVDEALKLFSQMHED-NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE--KHCQ 341
Query: 161 HSVDVFQDLI-SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
+V + LI S ED N+ K K L+ G PS+V+ N L++G K
Sbjct: 342 PNVHTYTVLICSLCEDSNFDDAK--------KILNGMLEKGLIPSVVTYNALIDGYCKKG 393
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
++ M PN T+N L FC+ ++ K L K+ E P++VTYN
Sbjct: 394 LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYN 453
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH----- 334
LI CK+G L A+ L +M ++PD TY+ ++ LCK G V EA LF
Sbjct: 454 ILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK 513
Query: 335 ------------------------------RMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+M+ G P+ ++YN+LI YCKE +E+
Sbjct: 514 GIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA 573
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ L+ M+ I P T I++ K+ A ++ ++ G IY I A
Sbjct: 574 RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHA 633
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C R A L+ ++ G +P +Y +++ + S+ A + M + +PS
Sbjct: 634 YCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPS 693
Query: 485 LSTYRALI 492
TY LI
Sbjct: 694 YYTYSCLI 701
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 199/467 (42%), Gaps = 27/467 (5%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNW 178
+++P Y +++H A K+L + E LV D + VF D +
Sbjct: 444 KLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPD-EWTYSVFIDTL-------- 494
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K GL+ E+ F + G + + V + L++G K+ + + ++M G P
Sbjct: 495 --CKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVP 552
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ T+N L +CK + + ++ + + +P TY LI + K + A ++
Sbjct: 553 NSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMF 612
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M PD+ YT ++ C G++++A L +M +G+ PD + Y I AY +
Sbjct: 613 DQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRF 672
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + +L M G P +T +++ + + + GV+ S D
Sbjct: 673 GSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVA-SNDFS 731
Query: 419 DYLIVALCQDNRPFAAT-SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ C + T L ++ + G P+ Y + + LCK + A L D M
Sbjct: 732 N------CWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMK 785
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ P+ Y +L+ C C +G GEA+ +D M+E+ LP C++L+ G E +
Sbjct: 786 EKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDE 845
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDG------DLSKLMELQ 578
KA+ + F + YD + + + + G DL +ME Q
Sbjct: 846 KAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQ 892
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 103/243 (42%), Gaps = 33/243 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL--------------------LKL 218
AY + G I +F ++ +VG +PS + + L+ L +
Sbjct: 668 AYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVAS 727
Query: 219 NCIDQCWQ---------VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
N CW+ ++ +M G PN +T+ CK G ++ + + ++E+
Sbjct: 728 NDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEK 787
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G P+ YN+L+ C+ G +A IM LP L + L+ GL EG +A
Sbjct: 788 GQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKA 847
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL--LYEMMGNGIYPDTFTCQIIV 387
++F + + D + + LI K+G + L + E G I+P T++ +++
Sbjct: 848 KRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYS--MLI 905
Query: 388 QGY 390
+G+
Sbjct: 906 EGF 908
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 207/432 (47%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L E+V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEA-KSLIEVVVSRKGKGSASAVFA 59
Query: 168 DLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 AVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ A+ LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+
Sbjct: 300 QAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY ++ FC G + L+ EM G
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHA 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 153/354 (43%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 130
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 250
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ +P L YN L+ LCK + A L DEM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 310
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L DT +Y + N F + GD+ K +L K R G AP+ +T
Sbjct: 371 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 424
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 201/415 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ +F + L + P I LL + K+ + ++M GI P+ +T I+
Sbjct: 39 DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC VD L KI + G PD T+ TL+ C G++ +A ++ M
Sbjct: 99 NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VTY TLMNGLCK+ ++ EA LF M+ +G+SPDI +YN+LI A C + + +L
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ + I P+ + I+V KEG++ A ++V + + GV Y L+ C
Sbjct: 219 LNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCL 278
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A + + + ++G V ++ YN L+ CK + A+ L +EM + + P+ T
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C +GR +A++L +EM+ G +P+ +L++ C + +A ALL
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D + YN + GDL +L G P+ T MI L K
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 222/465 (47%), Gaps = 15/465 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P ++++ N+ FA+ +L ++++L H D F L+
Sbjct: 87 IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKL----GHQPDTATFTTLVR-------G 135
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
VG I E+ F K + GFQP++V+ L+NGL K + + ++ EM GI P+
Sbjct: 136 LCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPD 195
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L H C + V L ++ + P++V+ N ++ + CK+G++ +A +
Sbjct: 196 IFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVD 255
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + V PD+VTY LM+G C ++ EA ++F MV G ++VSYNTLI YCK
Sbjct: 256 MMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQ 315
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ ++ L EM + P+T T ++ G GRL A+ L E+ G + Y
Sbjct: 316 RIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYS 375
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+++R A +LL+ I P +++YN ++ +C+ + A L + R
Sbjct: 376 ILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR 435
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P + T+ +I C G EA L EM E+G L + + G ++A
Sbjct: 436 GLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRA 495
Query: 540 EALL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LL A+ F D + + M ++DG + ++ F+R
Sbjct: 496 IQLLEEMLARGFS-ADVSTTALLVKMLSDDGLDQSVKQILCEFMR 539
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 193/404 (47%), Gaps = 5/404 (1%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
+K G P + + ++N LN +D V ++ ++G P+T TF L C
Sbjct: 80 KKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVV 139
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + + +K+ EGF P++VTY TL++ CK +L +A L+ M + + PD+ TY
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+L++ LC + + L + MV + P++VS N ++ A CKEGK+ E+ ++ M+
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G+ PD T ++ G+ + A+ + + R G + Y+ LI C+ R
Sbjct: 260 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A L E + + +P+ Y+ L+ LC + DA+ L +EMV P+L TY L+
Sbjct: 320 AMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLD 379
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C R EA++L+ + S + PD Q+ + I+G C D+ A L A +
Sbjct: 380 YLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQP 439
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRF-----LRLGFAPNNLT 592
D ++N + + G L + +L + LR G N +T
Sbjct: 440 DVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTIT 483
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 143/310 (46%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M + P + + L+ + K L +M G+ PD+ +
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I ++C ++ + S+L +++ G PDT T +V+G G++ AL++ ++ G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ Y L+ LC+D + A +L + G P + YN L+ +LC
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L +EMV I P++ + ++ C G+ EA ++D M++ G+ PD L++G+
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C+ ++++A + + + + SYN + N + + + K M L + R PN
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336
Query: 591 LTCKYMIHSL 600
+T +IH L
Sbjct: 337 MTYSTLIHGL 346
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%)
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+++ DAL M+ + P + + L+ + +SL +M G+ PD
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
++IN +C V+ A ++L K DT ++ + G + + +++ + +
Sbjct: 95 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF PN +T +++ L K
Sbjct: 155 EGFQPNVVTYGTLMNGLCK 173
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 220/461 (47%), Gaps = 39/461 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + GL+ ++ + + L VG Q ++V+ N LL GL ++ + V+ M + G+ P
Sbjct: 403 GFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTP 462
Query: 239 N-----------------------------------THTFNILTHVFCKNGDVDKVNGFL 263
+ T+ FN + + FCK + +
Sbjct: 463 DEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETF 522
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++E GF+PD VTY TLI YCK G + +AF + M + +LP + Y +L+ GL K
Sbjct: 523 NRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKS 582
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K RE L M +GLSP++V+Y TLI +C EG++ ++ + ++M+ G P+ C
Sbjct: 583 KKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIIC 642
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA--LCQDNRPFAATSLLERI 441
IV + GR+ A L+ ++ V + +D L A D++ A T L+
Sbjct: 643 SKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADT--LDES 700
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ +P+ +YN + LCK V DA + ++ R P TY LI + G
Sbjct: 701 SKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNV 760
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A SL DEML+ G+ P+ LING C ++++A+ L K + SYN +
Sbjct: 761 NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G+ + ++L+ + L+ G +P+ +T +I+ K
Sbjct: 821 IDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 266/584 (45%), Gaps = 52/584 (8%)
Query: 60 KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKND 119
+++D I L G H LK L + + VLL+ + + +++L FF
Sbjct: 34 ELIDRISRLLVLGRYHA------LKDLNFQFSDYILDSVLLKLKFNPIASLHFFKLASKQ 87
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+P +++C +VHIL+ + L ELV K+ S+ V+ +L+ ED ++
Sbjct: 88 SNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFEDFKFS 147
Query: 180 ----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
Y + G+I+ + F +G PS+ SCN LL+ L++ VY+
Sbjct: 148 PTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYD 207
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+ R+GI P+ T +I+ + +CK+G V+ F+++++ GF+ ++VTYN+LI G
Sbjct: 208 HINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIG 267
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RGLSPDIVSY 348
+ A + ++M R +L + VT T L+ G C++ K+ EA ++ M G+ D +Y
Sbjct: 268 DMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAY 327
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
LI YC+ KM ++ L EM+ G+ + F C ++ GY K G++ A L++ +
Sbjct: 328 GVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVD 387
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ + Y L+ C++ A S+ + + G ++ +N L++ LC+ + D
Sbjct: 388 WDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFED 447
Query: 469 ALLLKDEMVDRNIKPSLSTY--------------RAL---------------------IC 493
AL + M+ R + P +Y RAL I
Sbjct: 448 ALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMIN 507
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
FC + + EA + M E G PD R LI+GYC +V +A + K+ +
Sbjct: 508 GFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILP 567
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
E YN++ + ++M+L G +PN +T +I
Sbjct: 568 SIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLI 611
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 221/458 (48%), Gaps = 48/458 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P +YC ++ +L +F A+ + ++ L + S F +I+ +
Sbjct: 460 VTPDEVSYCTLLDLLFKMGEFFRALALWNDI--LARGYGRSTYAFNTMIN-------GFC 510
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + E+ +TF + ++GF+P V+ L++G KL +++ ++V E+M + I P+
Sbjct: 511 KMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIE 570
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L K+ +V L ++ +G P++VTY TLI+ +C +GRL+ AF Y M
Sbjct: 571 LYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDM 630
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV--------------HRGLS----- 342
+ P+++ + +++ L + G++ EA+ L +MV H+
Sbjct: 631 IEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDS 690
Query: 343 ----------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
P+ V YN I CK GK+ ++K + ++ G PD FT +
Sbjct: 691 QKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTL 750
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY G + A +L E+ + G++ + Y+ LI LC+ A L +++ G
Sbjct: 751 IHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGL 810
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN L++ CK + +AL L+++M+ I PSL TY ALI FC G G+A +
Sbjct: 811 APNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATN 870
Query: 507 LMDEMLESGMLPDSQICRV--LINGYCMEKDVNKAEAL 542
L+DEM E + D I + L+ G+ +V K L
Sbjct: 871 LLDEMRE--LFADQNIAKFVKLVEGHVKCGEVKKIAKL 906
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 215/449 (47%), Gaps = 2/449 (0%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
LV D + + + D+ +C+ N AY K G + + ++ +GF+ ++V+ N L++G
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVN-AYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDG 262
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE-EGFDP 273
+ + +++ V + MG GI N T +L +C+ +++ L ++E EG
Sbjct: 263 CVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVL 322
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D Y LI YC+ +++DA L M + +L L+NG CK G+V EA +L
Sbjct: 323 DEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLL 382
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
RMV L P+ SY+TL+ +C+EG + ++ S+ EM+ GI + T +++G +
Sbjct: 383 MRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRV 442
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G AL++ + + GV+ Y L+ L + F A +L I GY S +
Sbjct: 443 GAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAF 502
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ CK + + +A + M + +P TYR LI +C +G EA + ++M +
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEK 562
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+LP ++ LI G K + LL K + +Y + + ++G L K
Sbjct: 563 EAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDK 622
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GFAPN + C ++ SL++
Sbjct: 623 AFTAYFDMIEKGFAPNVIICSKIVSSLYR 651
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 198/424 (46%), Gaps = 35/424 (8%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L++G ++ +D ++ +EM +G+ N N L + +CKNG V + L ++ +
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+P+ +Y+TL+ +C++G + A +Y M R + ++VT+ +L+ GLC+ G +A
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++H M+ RG++PD VSY TL+ K G+ + +L +++ G T+ ++ G+
Sbjct: 450 HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGF 509
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K +++ A ++ G Y LI C+ A + E++ ++ +PS+
Sbjct: 510 CKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSI 569
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
E+YN L+ L K + + L EM + + P++ TY LI +C GR +A + +
Sbjct: 570 ELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFD 629
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALL------------GFF------------ 546
M+E G P+ IC +++ +++A LL G+F
Sbjct: 630 MIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLD 689
Query: 547 -----------AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+K F + ++ YN + G + ++ L GF+P+N T
Sbjct: 690 SQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCT 749
Query: 596 MIHS 599
+IH
Sbjct: 750 LIHG 753
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 207/459 (45%), Gaps = 35/459 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +V + ++ + + L+VG + ++ CN L+NG K + + ++ M + P
Sbjct: 333 GYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEP 392
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++++ L FC+ G V K ++ G ++VT+N+L+ C+ G DA +++
Sbjct: 393 ESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVW 452
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M +R V PD V+Y TL++ L K G+ A L++ ++ RG ++NT+I +CK
Sbjct: 453 HLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKM 512
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
KM E++ M G PD T + ++ GY K G + A + ++++ + S ++Y
Sbjct: 513 EKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELY 572
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + + LL + G P++ Y L+ C + A +M++
Sbjct: 573 NSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIE 632
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML-------------------------- 512
+ P++ ++ +GR EA L+ +M+
Sbjct: 633 KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQK 692
Query: 513 ---------ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
+S LP+S + + I G C V+ A+ + + D +Y + +
Sbjct: 693 IADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIH 752
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ G+++ L+ L+ G APN +T +I+ L K
Sbjct: 753 GYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCK 791
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 149/293 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++F + ++ GF P+++ C+ +++ L +L ID+ + ++M + + + F
Sbjct: 618 GRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYF 677
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L N D K+ L++ + P+ V YN I+ CK G+++DA ++ +
Sbjct: 678 DRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLL 737
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R PD TY TL++G G V +A L M+ RGL+P+I++YN LI CK G +
Sbjct: 738 RGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDR 797
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ L ++ G+ P+ + I++ GY K G AL+L ++ + G+S S Y LI
Sbjct: 798 AQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIY 857
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
C+ AT+LL+ + + ++ + +L+E KC V L + M
Sbjct: 858 GFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 1/160 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + ++F + L G P+I++ N L+NGL K +D+ ++++++ G+ P
Sbjct: 753 GYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAP 812
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++NIL +CKNG+ + K+ +EG P L+TY+ LI +CK+G + A L
Sbjct: 813 NVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLL 872
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
M ++ + L+ G K G+V++ +L H M+H
Sbjct: 873 DEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL-HNMMH 911
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 216/451 (47%), Gaps = 40/451 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L + A +L E+ L+ C V+ F D++ +
Sbjct: 208 PDAVLYQTVIHALCDQGGVTEAATLLNEM--LLMGCAADVNTFDDVVR-------GMCGL 258
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC------------------- 224
G +RE+ + + + G P +++ FLL GL ++ D+
Sbjct: 259 GRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVI 318
Query: 225 ------------WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
++YE MG G P+ HT++IL H CK G + L ++E++GF
Sbjct: 319 GGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFA 378
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++VTY ++ S+CK G +D L M + + + Y ++ LCK+G++ EA L
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G +PDI SYNT+I+ C +M+E++ + ++ G+ + T I+ +
Sbjct: 439 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 498
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+GR A+ L E+ G S+ Y+ LI A+C+D + LLE + + G P+
Sbjct: 499 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 558
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK V DAL L +M+++ + P + TY LI C +G A++L++++
Sbjct: 559 YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ PD +LI+ +C + ++ A LL
Sbjct: 619 NENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 171/331 (51%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + + G QP + + L++GL KL I ++ EM + G PN T+
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTY 384
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
I+ H FCKNG D LE++ +G + YN +I + CK GR+++A L + M
Sbjct: 385 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ +Y T++ LC ++ EA +F ++ G+ + ++YNT+I A ++G+ Q+
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ +G D + +++ K+G + +L L+ E+ G+ + Y+ LI
Sbjct: 505 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 564
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC++ R A L +++ G P + YN L+ LCK + AL L +++ + N+ P
Sbjct: 565 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP 624
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ TY LI C + +A L++ + +
Sbjct: 625 DIITYNILISWHCKVRLLDDAAMLLNRAMAA 655
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 205/471 (43%), Gaps = 69/471 (14%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDK 258
G QPS S N +L+ L + +C +Y M R + P T TF + C+ G ++
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L + G PD V Y T+I + C +G + +A L M D+ T+ ++
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK--------------------- 357
G+C G+VREA +L RM+ +G P +++Y L+ C+
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313
Query: 358 ----------EGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
EGK+ E+ L YE MG G PD T I++ G K GR+ SA+ L+ E+
Sbjct: 314 FNTVIGGCLAEGKLAEATEL-YETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372
Query: 407 QRFG-----------------------------------VSISRDIYDYLIVALCQDNRP 431
++ G ++++ Y+ +I ALC+D R
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L++ + G P + YN ++ LC + + +A + + +++ + + TY +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I GR +AV L EM+ G D LI C + +V+++ LL A+K
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ SYN + + ++ + +EL K+ L G AP+ +T +I+ L K
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 83/157 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++ G +++ + ++ + G +VS N L+ + K +D+ + EEM GI P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++NIL CK V +++ +G PD+VTYNTLI+ CK G ++ A L
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
++ NV PD++TY L++ CK + +A L +R
Sbjct: 615 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 651
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 227/460 (49%), Gaps = 12/460 (2%)
Query: 154 ELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
E+ K C VF D+++ + A + G + + + G +P +V+ N +L
Sbjct: 184 EMEKRC-----VFPDVVTHNVMVD-ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLK 237
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GLL+ D+ +V+ M G+ P+ +FN+L FC+ G++++ F +++ P
Sbjct: 238 GLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTP 297
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+V+++ LI + ++G ++ A R M ++PD V YT ++ G C+ G + EA ++
Sbjct: 298 DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVR 357
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
MV G PD+V+YNTL+ CKE ++ +++ LL EM G+ PD T ++ GY ++
Sbjct: 358 DEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417
Query: 394 GRLLSALNL--VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G + AL + QR I Y+ LI +C+ A L + + P+
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIV--TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y+ L++S C+ V +A DEMV++ I P++ TY ++I +C G + + +M
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
++PD LI+GY E +++A LL + D +YN + + F+ G++
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNM 595
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMI--HSLWKGMERKFQ 609
+ + K+ G P+ T MI H + ++ FQ
Sbjct: 596 QEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQ 635
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 204/412 (49%), Gaps = 5/412 (1%)
Query: 184 GLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
GL+R ++ + FR G P + S N L+ G + +++ + Y+EM + P
Sbjct: 238 GLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTP 297
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +F+ L +F + G++D +L ++ E G PD V Y +I +C+ G + +A +
Sbjct: 298 DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVR 357
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M LPD+VTY TL+NGLCKE ++ +A +L + M RG+ PD+ ++ TLI YC++
Sbjct: 358 DEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++++ + + PD T ++ G ++G L A L ++ + + Y
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI + C+ + A + L+ + G VP++ YN +++ C+ +V+ +M
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P L TY LI + G+ EA +L+ M + PD+ ++I+G+ + ++ +
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
A+ + + D +Y ++ N G+ K +L L+ G AP++
Sbjct: 598 ADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDD 649
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 200/421 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + +R L + + + N +++ K + V EM + + P+
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T N++ + GDV+ ++ + +G P LVTYN+++ + GR + A ++R M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD+ ++ L+ G C+ G++ EA + + M R ++PD+VS++ LI + + G+M
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM G+ PD +++ G+ + G +L AL + E+ FG Y+ L
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++ R A LL + + G P L + L+ C+ ++ AL D + D+ +
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + TY LI C G G+A L D+M + P+ +LI+ +C + V+ A A
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L K + + +YN++ + G++SK + + P+ +T +IH
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYV 555
Query: 602 K 602
K
Sbjct: 556 K 556
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 173/343 (50%), Gaps = 35/343 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + GL+ E+ + + + G P +V+ N LLNGL K + ++ EM G+ P
Sbjct: 343 GFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP 402
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF L H +C++G+++K F + I ++ PD+VTYNTLI C++G L A L+
Sbjct: 403 DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW 462
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R + P+ VTY+ L++ C++G+V A MV++G+ P+I++YN++I YC+
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRS 522
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + + L +M + + PD T ++ GY KEG++ A NL+ ++ V
Sbjct: 523 GNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENV------- 575
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+P A T YN ++ ++ +A + +M
Sbjct: 576 -----------QPDAVT-----------------YNMIISGFSVHGNMQEADWVYKKMGA 607
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
R I+P TY ++I G S ++ L DEML+ G+ PD +
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 142/294 (48%), Gaps = 12/294 (4%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS-AL 110
LP+ N +++ +C + D+ L + + + P L + + C+ ++ AL
Sbjct: 366 LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTF-TTLIHGYCRDGNIEKAL 424
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
FF+ + +D ++P Y ++ + A ++ ++ HS ++F + +
Sbjct: 425 QFFDTI-SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM--------HSREIFPNHV 475
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
+ + + ++ + G + +F + ++ G P+I++ N ++ G + + + Q +
Sbjct: 476 TYSILID-SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPK 534
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + P+ T+N L H + K G + + L+ +E E PD VTYN +IS + G
Sbjct: 535 MRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGN 594
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+ +A ++Y+ M R + PD TY +++NG G +++ QL M+ +GL+PD
Sbjct: 595 MQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 231/483 (47%), Gaps = 12/483 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ KP + YC +V L + A + E++ DVF D ++ + A
Sbjct: 173 DAKPAA--YCTVVRGLYAHGHGYNARHLFDEML--------GRDVFPD-VATFNNVLHAL 221
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + ES K L G + +CN + GL + +++ + E MG + P+
Sbjct: 222 CQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDV 280
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L CK+ V + +L ++ +G PD TYNT+I YCK G L +A L +
Sbjct: 281 VTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKD 340
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ +PD VTY +L+NGLC EG + A +LF+ + L PD+V YN+L+ C++G
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 400
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + ++ EM+ G +PD +T II+ G K G + A ++ + G ++
Sbjct: 401 ILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 460
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ + +A L+ER+ G P + YN ++ LCK + +EM+ +
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P+ TY LI FC I + EA ++ M + G++PD+ LI+G+C D++ A
Sbjct: 521 CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAY 580
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L +K +++N + ++ ++ ++ + G+ P+ T + ++ L
Sbjct: 581 LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGL 640
Query: 601 WKG 603
K
Sbjct: 641 CKA 643
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 18/380 (4%)
Query: 148 MLCELVELVKDC------PHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDV 199
ML E EL+KD P V + LI+ C E G I + + F +
Sbjct: 330 MLQEATELLKDAVFKGFVPDRV-TYCSLINGLCAE---------GDIERALELFNEAQAK 379
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
+P +V N L+ GL + I QV EM G P+ T+NI+ + CK G++
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +G+ PD+ T+NTLI YCK+ +L+ A L M+ + PD++TY +++NG
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK GK +E ++ F M+ +G P+ ++YN LI +CK +++E+ ++ M +G+ PD
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ ++ G+ + G L A L +L G S + D ++ LI A A +
Sbjct: 560 AVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 619
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ GY P L Y L++ LCK +V A EM+ + PS++T+ ++
Sbjct: 620 EMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNH 679
Query: 500 RSGEAVSLMDEMLESGMLPD 519
R EAV+++ M+ G++P+
Sbjct: 680 RVSEAVAIIHIMVRMGVVPE 699
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 35/421 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N L+ GL K + + + Q M G P+ T+N + +CK+G + +
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ +GF PD VTY +LI+ C +G + A L+ +++ PDLV Y +L+ GLC+
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G + A Q+ + MV G PDI +YN +I CK G + ++ ++ + + G PD FT
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN------------- 429
++ GY K +L SAL LV + +G++ Y+ ++ LC+
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 430 ----RPFA------------------ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
RP A A+ ++ R+ QDG VP +N L+ C+ +
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A LL ++ ++ + T+ LI + A + EM+ G PD R+L+
Sbjct: 578 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILV 637
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C +V++A A L K + ++ + N+ A + +S+ + + +R+G
Sbjct: 638 DGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVV 697
Query: 588 P 588
P
Sbjct: 698 P 698
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 202/429 (47%), Gaps = 1/429 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + G +R + F + P+ + N +++ L+ DQ +VY M G+ P
Sbjct: 80 AYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAP 139
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T + FC G L + E G D Y T++ G +A +L+
Sbjct: 140 DARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLF 199
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+V PD+ T+ +++ LC++G V E+ L +++ RG+S + + N I C++
Sbjct: 200 DEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCED 259
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++E+ +L+ E MG + PD T +++G K+ ++ A + + G Y
Sbjct: 260 GRLEEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTY 318
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ AT LL+ G+VP Y L+ LC + AL L +E
Sbjct: 319 NTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQA 378
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KP L Y +L+ C G A+ +M+EM+E G PD ++ING C +++
Sbjct: 379 KDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISD 438
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ K + D ++N + + + + L ++L +R G AP+ +T +++
Sbjct: 439 AAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498
Query: 599 SLWKGMERK 607
L K + K
Sbjct: 499 GLCKAGKAK 507
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 184/370 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G+++E+ + + + GF P V+ L+NGL I++ +++ E + P
Sbjct: 324 GYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKP 383
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L C+ G + + ++ EEG PD+ TYN +I+ CK G ++DA +
Sbjct: 384 DLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVM 443
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LPD+ T+ TL++G CK K+ A QL RM G++PD+++YN+++ CK
Sbjct: 444 NDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKA 503
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK +E EM+ G P+ T I+++ + K +L A ++V + + G+ +
Sbjct: 504 GKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSF 563
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C++ A L +++ + GY + + +N L+ + ++ A + EM+
Sbjct: 564 NTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMIS 623
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ KP L TYR L+ C A + + EM+ G +P ++N M V++
Sbjct: 624 KGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSE 683
Query: 539 AEALLGFFAK 548
A A++ +
Sbjct: 684 AVAIIHIMVR 693
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 141/327 (43%), Gaps = 6/327 (1%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT--YTTLMNGLCKEGKVREAHQLFH 334
Y LI GRL+D R ++ PD + Y + + G++R A F
Sbjct: 37 AYRALIRELVSAGRLDDVDAAL-ASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
RM P +YN ++ A ++ + M+ G+ PD T + ++ + G
Sbjct: 96 RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERIGQDGYVPSLEIY 453
R AL L+ L G Y ++ L + A L E +G+D + P + +
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF-PDVATF 214
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ +LC+ V ++ L +++ R + + T I C GR EAV+L++ M
Sbjct: 215 NNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-G 273
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + PD L+ G C + V +A LG + I D +YN + + + + G L +
Sbjct: 274 AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQE 333
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
EL K + GF P+ +T +I+ L
Sbjct: 334 ATELLKDAVFKGFVPDRVTYCSLINGL 360
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 39/229 (17%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +E +TF + + G +P+ ++ N L+ K+N +++ V M + G+ P+
Sbjct: 502 KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAV 561
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFD----------------------------- 272
+FN L H FC+NGD+D +K++E+G+
Sbjct: 562 SFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM 621
Query: 273 ------PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
PDL TY L+ CK ++ A+ M + +P + T+ ++N L +V
Sbjct: 622 ISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRV 681
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
EA + H MV G+ P++V +T++ KE + K L+ E+M G
Sbjct: 682 SEAVAIIHIMVRMGVVPEVV--DTILSTDKKE--IAAPKILVEELMKKG 726
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 202/418 (48%), Gaps = 23/418 (5%)
Query: 128 NYCLIVHILAWNNKFSFAMKML----------------CELVELVKDCPHSVDVFQDLIS 171
+YC ++H L + FS A ++ ++E + VF LI+
Sbjct: 3 SYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 62
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
AY++ G +R++ + +R T + +C +L L+KL W YEE+
Sbjct: 63 -------AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEI 115
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L
Sbjct: 116 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 175
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TL
Sbjct: 176 DEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTL 235
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I +CK G++ + + +M+ + PD T ++ G K+G L A L+ E+ G+
Sbjct: 236 IDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGL 295
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ Y LI C++ AA +R+ Q+ Y ++ LC+ DA
Sbjct: 296 KPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEK 355
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ EM+ +KP TY +I FC G + L+ EM +G +P VL+NG
Sbjct: 356 MLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 162/385 (42%), Gaps = 36/385 (9%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+++ V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 22 SLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR 81
Query: 303 R----------RNVLPDLVT-------------------------YTTLMNGLCKEGKVR 327
R VL L+ + LM+ CK+G +R
Sbjct: 82 EHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIR 141
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A +F + GL P +VSYNTL+ Y + G + E L M+ +G+ PD +T +++
Sbjct: 142 VAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLI 201
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G KE ++ A L E+ G+ + + LI C++ R A + +++ +
Sbjct: 202 NGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 261
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN L+ LCK + A L DEM + +KP TY LI C G A
Sbjct: 262 PDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEH 321
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M++ + D +I+G C E AE +L DT +Y + N F +
Sbjct: 322 RKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCK 381
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLT 592
GD+ K +L K R G P+ T
Sbjct: 382 KGDVWKGSKLLKEMQRNGHVPSVXT 406
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC EA L +V R DI ++ L
Sbjct: 1 LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + ++ TC+ +++ K E+ G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G++P+ LI+G+C
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + + D +YN + + GDL++ L G P+
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKF 300
Query: 592 TCKYMI 597
T +I
Sbjct: 301 TYTTLI 306
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 207/412 (50%), Gaps = 6/412 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+VG + E+F + + G QPS + L+ L ID+ + +++EM G PN H
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVH 337
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L C++G +++ NG K+ ++G P ++TYN LI+ YCK GR+ AF L +M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R P++ T+ LM GLC+ GK +A L RM+ GLSPDIVSYN LI C+EG M
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL M + PD T I+ + K+G+ A + + R G+S+ L
Sbjct: 458 NVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I +C + A +LE + + + + N +++ L K + + L + ++ +
Sbjct: 518 IDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGL 577
Query: 482 KPSLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
PS+ TY L+ G+ RSG+ + +++ M SG LP+ ++ING C V +
Sbjct: 578 VPSVVTYTTLV---DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
AE LL + +Y + + +G L + +E + + G+ N+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 251/541 (46%), Gaps = 24/541 (4%)
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWV--KNDLEIKPTSSNYCLIVHILAW 138
+ LK L+ H+ + S+V+ +SD+ + FF WV + PT N ++ ++
Sbjct: 58 SSLKSLVSHMSPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQ--LLKLIVS 115
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN----------------WAYVK 182
+ F A ++ V L+++C LISC ++ + K
Sbjct: 116 SGLFRVAHDVI---VALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAK 172
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ L ++ T+R+ GF ++ ++N L K + ++ ++G ++H
Sbjct: 173 LDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHI 232
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGF-DPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
L FC+ ++ + + EG P+ V+Y+ LI C+ GRL +AF L M
Sbjct: 233 VTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P TYT L+ LC G + +A LF M+ RG P++ +Y LI C++GK+
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKI 352
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ + +M+ +GI+P T ++ GY K+GR++ A L+ +++ + ++ L
Sbjct: 353 EEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ +P+ A LL+R+ +G P + YN L++ LC+ + A L M ++
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDL 472
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P T+ A+I FC G++ A + + ML G+ D LI+G C A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K + S N + +M ++ L + + + + +LG P+ +T ++ L
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 602 K 602
+
Sbjct: 593 R 593
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 9/412 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P++ Y +++ L A + E++ + C +V + LI +
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMI--ARGCKPNVHTYTVLID-------GLCR 348
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I E+ RK + G PS+++ N L+NG K + +++ M + PN T
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN L C+ G K L+++ + G PD+V+YN LI C++G +N A+ L M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++ PD +T+T ++N CK+GK A M+ +G+S D V+ TLI C GK +
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +L ++ + + +I+ K +L L ++ ++ + G+ S Y L+
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
L + + +LE + G +P++ Y ++ LC+ V +A L M D +
Sbjct: 589 DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
P+ TY ++ + G+ A+ + M+E G + +I L+ G+ + +
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQ 700
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 198/471 (42%), Gaps = 68/471 (14%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ C +V F +L+ +VG ++ ++ LD G P IVS N L++GL
Sbjct: 400 RACKPNVRTFNELME-------GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ ++ +++ M + P+ TF + + FCK G D + FL + +G D V
Sbjct: 453 REGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVL----------------------------- 307
T TLI C G+ DA ++ + + +L
Sbjct: 513 TGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKI 572
Query: 308 ------PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P +VTYTTL++GL + G + + ++ M G P++ Y +I C+ G++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ LL M +G+ P+ T ++V+GY G+L AL V + G ++ IY L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 422 IVALCQDNRPFAAT---------SLLERIGQDGYVPSLEIYNELMESLCK------CDSV 466
+ + T S++E++G G L I+ L+ LCK + +
Sbjct: 693 LRGFVLSQKGIRETDPECIKELISVVEQLG--GSTSGLCIF--LVTRLCKEGRTDESNGL 748
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+L +++ I + +Y C + + V L+ +L+SG +P + ++
Sbjct: 749 VQTILKSGVFLEKAIDIIMESY-------CSKKKHTKCVELITLVLKSGFVPSFKSFCLV 801
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
I G E D +A L+ + + E GD S++++L
Sbjct: 802 IQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDL 852
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 174/433 (40%), Gaps = 50/433 (11%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D + P +Y +++ L + A K+L + +S D+ D ++ T N
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM--------NSFDLEPDCLTFTAIIN- 484
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G + L G V+ L++G+ + + E + ++ +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLT 544
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
H+ N++ + K + + L KI + G P +VTY TL+ + G ++ +F +
Sbjct: 545 TPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRML 604
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M LP++ YT ++NGLC+ G+V EA +L M G+SP+ V+Y ++ Y
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 359 GKMQESKSLLYEMMGNG------IYPDTFT------------------------------ 382
GK+ + + M+ G IY
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGS 724
Query: 383 ----CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
C +V KEGR + LV + + GV + + I D ++ + C + L+
Sbjct: 725 TSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAI-DIIMESYCSKKKHTKCVELI 783
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + G+VPS + + +++ L K A L E++ N S + C
Sbjct: 784 TLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMET 843
Query: 499 GRSGEAVSLMDEM 511
G E + L+D++
Sbjct: 844 GDCSEVIDLVDQL 856
>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
Length = 859
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 254/556 (45%), Gaps = 48/556 (8%)
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
H +L R + + L+FF+ + +P S +Y +++HIL F A +L +L
Sbjct: 68 HLTDSLLRRLRLHPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQL 127
Query: 153 VEL--------VKDCPHSVDVFQDLISCTEDCNW---AYVKVGLIRESFKTFRKTLDVGF 201
++L C H V+++ C+ + A+ + G+ + + F + +G
Sbjct: 128 MDLHCTNNYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGR 187
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P + SC+FLL L++ V++++ GI P+ + +I+ + C+ G VD
Sbjct: 188 VPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAME 247
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
LEK+ +EG +P++VTYN L++ Y +G + R+M R V ++VT T LM G C
Sbjct: 248 VLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYC 307
Query: 322 KEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K+GK+ EA +L + L D Y L+ YC+ G+M+++ + EM+ G+ +
Sbjct: 308 KKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNM 367
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
C +++GY K G++ A + V + + + Y+ L+ C++ + A L E
Sbjct: 368 VICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEE 427
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP----------------- 483
+ DG P++ YN +++ L S DAL L MV+R + P
Sbjct: 428 MLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGD 487
Query: 484 ------------------SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
S + +I C +G+ EA ++ D M E G+ PD R
Sbjct: 488 SDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRT 547
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
L +GYC +V +A + G ++ E YN++ + + L+ + +L G
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607
Query: 586 FAPNNLTCKYMIHSLW 601
+PN +T +I S W
Sbjct: 608 LSPNVVTYGTLI-SGW 622
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 225/474 (47%), Gaps = 19/474 (4%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD-CPHSVDVFQDLISCTEDCN 177
D +KP +Y ++ K S A MLCE E++ D +V + +I
Sbjct: 395 DWNLKPDCYSYNTLLDGYCREGKVSKAF-MLCE--EMLGDGITPTVVTYNTVIK------ 445
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
V VG ++ + ++ G P+ +SC +L+ K+ D+ +++E+ G
Sbjct: 446 -GLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFT 504
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+T FN + CK G + + ++++E G PD +TY TL YCK G + +AF +
Sbjct: 505 KSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI 564
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+M R+ + + Y +L++GL K K+ + L M RGLSP++V+Y TLI +C
Sbjct: 565 KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCD 624
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV-SISRD 416
E K+ ++ L +EM+ G P+ C IV ++ R+ A ++ ++ F + ++
Sbjct: 625 EQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNK 684
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE---IYNELMESLCKCDSVADALLLK 473
D L+ +++ A + + + + SL +YN ++ LCK + +A +
Sbjct: 685 CSDKLV----KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVL 740
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
++ R P TY LI G EA L DEMLE G++P+ I LING C
Sbjct: 741 SVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKL 800
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
++++A+ L +K + + +YN + + GDL K L+++ G +
Sbjct: 801 GNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 203/422 (48%), Gaps = 6/422 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + ++F + L G P++V+ N ++ GL+ + D ++ M G+ P
Sbjct: 411 GYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTP 470
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + + F K GD D+ ++I GF V +NT+IS CK G+L +A ++
Sbjct: 471 NEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVF 530
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD +TY TL +G CK G V+EA Q+ M + +S I YN+LI K
Sbjct: 531 DRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKI 590
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ + LL EM G+ P+ T ++ G+ E +L A +L E+ G + + +
Sbjct: 591 RKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVC 650
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ +L +D+R AT +L+++ L ++N+ + L K D +A + D +
Sbjct: 651 SKIVSSLYRDDRISEATVILDKMLD---FDILAVHNKCSDKLVKNDLTLEAQKIADSLDK 707
Query: 479 RNIKPSLS---TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+I SLS Y I C G+ EA S++ ++ G LPD+ LI+ + +
Sbjct: 708 SDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGN 767
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V++A L +K I + YNA+ N + G++ + L + + G PN +T
Sbjct: 768 VDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNI 827
Query: 596 MI 597
+I
Sbjct: 828 LI 829
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 206/427 (48%), Gaps = 12/427 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y ++G + ++ + + L VG + ++V CN L+ G KL + + +V+ M + P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +++N L +C+ G V K E++ +G P +VTYNT+I G +DA +L+
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLW 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R V P+ ++ T+++ K G A L+ ++ RG + V++NT+I CK
Sbjct: 461 HLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKM 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ E+ ++ M G+ PD T + + GY K G + A + ++R +S S ++Y
Sbjct: 521 GKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMY 580
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + + T LL + G P++ Y L+ C + A L EM++
Sbjct: 581 NSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC--RVLINGYCMEKDV 536
R P++ ++ R EA ++D+ML+ +L C +++ N +E
Sbjct: 641 RGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQ- 699
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNM----FAEDGDLSKLMELQKRFLRLGFAPNNLT 592
A++L K I ++ S N V+N+ + G L + + + GF P+N T
Sbjct: 700 KIADSL-----DKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFT 754
Query: 593 CKYMIHS 599
+IH+
Sbjct: 755 YCTLIHA 761
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 208/474 (43%), Gaps = 72/474 (15%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ D+ C+ N A+ +VG + + + K + G +P++V+ N L+NG + +
Sbjct: 222 IVPDVYMCSIVVN-AHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE--------------- 269
+V M G+ N T +L +CK G +D+ L ++EE+
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340
Query: 270 ---------------------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
G ++V NTLI YCK G++ +A ++ M N+ P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D +Y TL++G C+EGKV +A L M+ G++P +V+YNT+I G ++ L
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLW 460
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+ M+ G+ P+ +C ++ + K G A+ L E+ G + S ++ +I LC+
Sbjct: 461 HLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKM 520
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A ++ +R+ + G P Y L + CK +V +A +K M + + S+ Y
Sbjct: 521 GKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMY 580
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+LI I + + L+ EM G+ P+ LI+G+C E+ ++KA
Sbjct: 581 NSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKA--------- 631
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F +Y F M GF PN + C ++ SL++
Sbjct: 632 -FHLY--------FEMIER-----------------GFTPNVVVCSKIVSSLYR 659
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 176/402 (43%), Gaps = 50/402 (12%)
Query: 211 LLNGLLKLNCIDQ------CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+L L+ L+C + C V+ G C + F++L F + G +
Sbjct: 123 VLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFC--SGVFDMLMKAFAERGMTKHALYVFD 180
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ G P L + + L+ +KG A ++ + ++PD+ + ++N C+ G
Sbjct: 181 EMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVG 240
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V A ++ +MV GL P++V+YN L+ Y G + + +L M G+ + TC
Sbjct: 241 RVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCT 300
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++++GY K+G++ A L+ E++ D L+V D R
Sbjct: 301 MLMRGYCKKGKMDEAEKLLREVEE----------DELLVV---DER-------------- 333
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+Y L++ C+ + DA+ ++DEM+ +K ++ LI +C +G+ EA
Sbjct: 334 -------VYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEA 386
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA----EALLGFFAKKFQIYDTESYNA 560
+ M++ + PD L++GYC E V+KA E +LG + +YN
Sbjct: 387 ERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVV----TYNT 442
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
V + G + L + G PN ++C M+ +K
Sbjct: 443 VIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFK 484
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N ++GL K +D+ V + G P+ T+ L H +G+VD+ +++ E
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G P++ YN LI+ CK G ++ A L+ +Y++ ++P+ VTY L+ C+ G + +
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDK 840
Query: 329 AHQLFHRMVHRGLSPDIV 346
A +L +M G+S I+
Sbjct: 841 ASRLREKMTEEGISTRII 858
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 8/435 (1%)
Query: 161 HSVDVFQDLISCTEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+ D+ +++IS N K+G + + K ++ + VG +P + N L+
Sbjct: 366 EAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLM 425
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
G + + D +++ EM GI PN +++ I+ + C+NG+ + LE++ EG
Sbjct: 426 QGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK 485
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ Y LI + K+G ++ A M + NV PDL Y +L+ GL G++ EA +
Sbjct: 486 PNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEY 545
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ ++ RGL PD +Y+ LI YCK G ++++ LL +M+ +G+ P+ T +++GY K
Sbjct: 546 YAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFK 605
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+++ + G IY +I L + A +L + ++G VP L I
Sbjct: 606 SNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHI 665
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LCK + A+ L DEM ++P + Y ALI FC G A ++ D +L
Sbjct: 666 YSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL 725
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G++P+ LI+G C D+ A L + D YN + ++ DL
Sbjct: 726 AKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLE 785
Query: 573 KLMELQKRFLRLGFA 587
+ + L + G+A
Sbjct: 786 QALFLTEEMFNRGYA 800
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 252/566 (44%), Gaps = 23/566 (4%)
Query: 56 QNPNKIVDLICSSLKK--GDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA---L 110
++P+ + + + L + GD L + +D+ L +S ++ +S S+ L
Sbjct: 44 EDPDAVAAEVATLLSRCAGDWKLAIAASDIPS---RLSPDAVSSLIFGGRSHSLHPKLLL 100
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
FF W + + P++ + + L + F A +L +++ P + Q I
Sbjct: 101 DFFYWSRPRI-APPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAI 159
Query: 171 SCTEDCNWA--------------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
T+ + + Y K G +R + + D+G P+ CN LL LL
Sbjct: 160 QDTDHRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLL 219
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ + ++ W++ M GI P+ +T++ CK D D E++ + V
Sbjct: 220 RADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEV 279
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYN +IS C+ G + +AF M + PD TY LMNGLCK +++EA L M
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
GL P+IV Y TL+ + KEGK E+ +L EM+ G+ P+ +++G K G+L
Sbjct: 340 SCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQL 399
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L+ E+ + G+ Y+ L+ Q + A LL + G +P++ Y +
Sbjct: 400 GRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIM 459
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ +A L +EM+ +KP+ Y LI G A +++M ++ +
Sbjct: 460 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD LI G + +AE K+ + D +Y+ + + + + G+L K +
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L ++ L G PN T ++ +K
Sbjct: 580 LLRQMLNSGLKPNADTYTDLLEGYFK 605
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 185/398 (46%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+IV L++G +K + + + +EM G+ PN ++ L CK G + +
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ L+++ + G PD TYN L+ + ++ + AF L M +LP++ +Y ++NG
Sbjct: 403 SKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ G+ +EA L M+ GL P+ Y LI + KEG + + L +M ++PD
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
F +++G GR+ A ++Q+ G+ Y LI C+ A LL
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P+ + Y +L+E K + + M+ KP Y +I
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
A ++ E+ ++G++PD I LI+G C D+ KA LL AK+ YN
Sbjct: 643 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYN 702
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A+ + F GD+S+ + L G PN +T +I
Sbjct: 703 ALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 168/338 (49%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
V+ N +++GL + +++ + EEM G+ P+ T+ L + CK + + L++
Sbjct: 279 VTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDE 338
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ G P++V Y TL+ + K+G+ +AF + + M V P+ + Y L+ GLCK G+
Sbjct: 339 MSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQ 398
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ A +L M+ GL PD +YN L+ + ++ + LL EM +GI P+ ++ I
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGI 458
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + G A NL+ E+ G+ + +Y LI+ ++ A LE++ +
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P L YN L++ L + +A ++ R + P TY LI +C G +A
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKAD 578
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L+ +ML SG+ P++ L+ GY D K ++L
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSIL 616
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 36/333 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + ++ + R+ L+ G +P+ + LL G K N ++ + + M G P
Sbjct: 567 GYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKP 626
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H + I+ ++ +++ L ++E+ G PDL Y++LIS CK + A L
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLL 686
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P +V Y L++G C+ G + A +F ++ +GL P+ V+Y LI CK
Sbjct: 687 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKN 746
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ L EM+ GI PD F ++ G L AL L E+
Sbjct: 747 GDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF----------- 795
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
NR +A SL +N L+ CK + + L M+D
Sbjct: 796 ----------NRGYANVSL---------------FNTLVHGFCKRGKLQETEKLLHVMMD 830
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
R I P+ T ++ F G+ GEA + E+
Sbjct: 831 REIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 128/304 (42%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R+ P L++ K G VR A Q+ M GL+P N L+ + M+
Sbjct: 167 RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMEL 226
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
L M G GI PD +T ++ + K +A + E++R +++ Y+ +I
Sbjct: 227 LWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMIS 286
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ A E + G P Y LM LCK + +A L DEM +KP
Sbjct: 287 GLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKP 346
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y L+ F G++ EA ++ EM+ +G+ P+ + LI G C + +A LL
Sbjct: 347 NIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K DT +YN + + D EL G PN + MI+ L +
Sbjct: 407 KEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQN 466
Query: 604 MERK 607
E K
Sbjct: 467 GESK 470
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 240/531 (45%), Gaps = 49/531 (9%)
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
H + +VL+R DS AL FFN++ +++++C+++H L NN F A +L L
Sbjct: 70 HHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTL 129
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWA-----------YVKVGLIRESFKTFRKTLDVGF 201
+ + PH +F++ + ++ YV+ + + D G
Sbjct: 130 LLRGLN-PH--QIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGL 186
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P + + + LLN L ++ Q ++++ + G+ P+ + + ++ C+ D +K
Sbjct: 187 LPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKE 246
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+ + E G +VTYN I+ CK R+ +A + R + + + DLVTY TL+ GLC
Sbjct: 247 IINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLC 306
Query: 322 -----------------------------------KEGKVREAHQLFHRMVHRGLSPDIV 346
K G + A +L +++ G+ P++
Sbjct: 307 RIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLF 366
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
YN++I + CK GK++E++ L M G+ P+ T I++ G+G+ +L A ++
Sbjct: 367 VYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM 426
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+S + Y+ +I C+ + A L + + G P++ Y L+ CK V
Sbjct: 427 IECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLV 486
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
A L EM + I P+ T+ ALIC C I + EA L DEM+E +LP+ VL
Sbjct: 487 PKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVL 546
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
I G+C E + +A LL KK DT +Y + G +S+ E
Sbjct: 547 IEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEF 597
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 205/407 (50%), Gaps = 1/407 (0%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+++G+ PS + + L+ GL+K+ I+ +++ ++G++G+ PN +N + + CK G +
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
++ + E G +P+ VTY LI + ++ +L+ AFY + M + + +Y ++
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N CK GK++ A LF MV +GL P + +Y +LI YCK+G + ++ L +EM G GI
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+T T ++ G + ++ A L E+ + + Y+ LI C++ A
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL+ + + G P Y L+ LC V++A +++ ++ + Y AL+ FC
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC 621
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
GR EA+ EM+ G+ D VLI+G + D E L K Q D
Sbjct: 622 KEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQP-DNV 680
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
Y + + F + G+L K E + G+ PN++T +++ L+K
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 225/501 (44%), Gaps = 17/501 (3%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ + V + + P Y +++ K A +++E C
Sbjct: 376 CKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE----CGI 431
Query: 162 SVDVF--QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S V+ +I+C C + +K+ + F++ +D G +P++ + L++G K
Sbjct: 432 SATVYSYNSMINC--QCKFGKMKMAEL-----LFKEMVDKGLKPTVATYTSLISGYCKDG 484
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ + +++Y EM GI PNT TF L C+ + + + +++ E P+ VTYN
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
LI +C++G AF L M ++ + PD TY L+ GLC G+V EA + + + H+
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG-YGKEGRLLS 398
D + Y L+ +CKEG+++E+ EM+G G+ D + +++ G + R+L
Sbjct: 605 HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRIL- 663
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L+ E+ G+ IY LI + A + +GYVP+ Y L+
Sbjct: 664 -FELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
L K V +A LL M+ P+ TY + G A+ L + ML+ G
Sbjct: 723 GLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFA 781
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
++ +LI GYC +A LL + D +Y+ + + G++ M++
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841
Query: 579 KRFLRLGFAPNNLTCKYMIHS 599
+ L+ G P+ + ++IH+
Sbjct: 842 ECMLQRGLKPDRVVFNFLIHA 862
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 200/438 (45%), Gaps = 54/438 (12%)
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
K A + E+V+ K +V + LIS Y K GL+ ++FK + + G
Sbjct: 450 KMKMAELLFKEMVD--KGLKPTVATYTSLIS-------GYCKDGLVPKAFKLYHEMTGKG 500
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P+ V+ L+ GL ++N + + ++++EM + I PN T+N+L C+ G+ +
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAF 560
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L+++ ++G PD TY LI+ C GR+++A ++ ++ D + YT L+ G
Sbjct: 561 ELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGF 620
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE----MMGNGI 376
CKEG+++EA MV RGL D+VSY LI G + ++ +L+E M G G+
Sbjct: 621 CKEGRIKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRILFELLREMHGKGM 675
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD I++ G+ K G L A + G + Y L+ L + A
Sbjct: 676 QPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKL 735
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L +R+ +P+ Y ++ L K ++ +AL L + M+ + ++ TY LI +C
Sbjct: 736 LFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTV-TYNILIRGYC 794
Query: 497 GIGRSGEAVSLMDEM-----------------------------------LESGMLPDSQ 521
IG+ EA L+D M L+ G+ PD
Sbjct: 795 QIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRV 854
Query: 522 ICRVLINGYCMEKDVNKA 539
+ LI+ C+ ++++A
Sbjct: 855 VFNFLIHACCLNGELDRA 872
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 6/313 (1%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
E E + D H +L C + K G I+E+ ++ + G Q +VS
Sbjct: 593 EAKEFINDLHHKHQRLDEL--CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAV 650
Query: 211 LLNGLLKLNCIDQC-WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L++G L N D+ +++ EM G+ P+ + IL F K+G++ K F + E
Sbjct: 651 LISGALNQN--DRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G+ P+ VTY L++ K G +N+A L++ M +P+ +TY ++ L KEG + A
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENA 768
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
QL H + +G + V+YN LI YC+ GK QE+ LL M+G G+ PD T +
Sbjct: 769 LQL-HNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYE 827
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K G + +A+++ + + G+ R ++++LI A C + A L + G P+
Sbjct: 828 YCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPT 887
Query: 450 LEIYNELMESLCK 462
Y+ LM L +
Sbjct: 888 QSTYHSLMVQLAQ 900
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 173/405 (42%), Gaps = 44/405 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + + ++ L NK + A K+ E+VEL K P+ V + LI +
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVEL-KILPNEV-TYNVLIE-------GHC 551
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G +F+ + + G P + L+ GL + + + ++ +
Sbjct: 552 REGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDEL 611
Query: 242 TFNILTHVFCKNGDVDK-----------------------VNG-----------FLEKIE 267
+ L FCK G + + ++G L ++
Sbjct: 612 CYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMH 671
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+G PD V Y LI + K G L AF + IM +P+ VTYT L+NGL K G V
Sbjct: 672 GKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVN 731
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA LF RM+ P+ ++Y + KEG M+ + L+ M G + +T T I++
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ-LHNAMLQGSFANTVTYNILI 790
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+GY + G+ A L+ + G+ Y I C+ AA + E + Q G
Sbjct: 791 RGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLK 850
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
P ++N L+ + C + AL L+++M+ R +KP+ STY +L+
Sbjct: 851 PDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 1/218 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G ++++F+ + + G+ P+ V+ L+NGL K +++ +++ M P
Sbjct: 688 GFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIP 747
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ K G+++ + + F + VTYN LI YC+ G+ +A L
Sbjct: 748 NHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-ANTVTYNILIRGYCQIGKFQEAAKLL 806
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M ++PD +TY+T + CK G V A ++ M+ RGL PD V +N LI A C
Sbjct: 807 DVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLN 866
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G++ + L +MM G+ P T ++ + RL
Sbjct: 867 GELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 1/182 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F++ L P+ ++ L+ L K ++ Q++ M + G NT
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTV 784
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NIL +C+ G + L+ + G PD +TY+T I YCK+G ++ A ++ M
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECM 844
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R + PD V + L++ C G++ A QL + M+ RGL P +Y++L+ + ++
Sbjct: 845 LQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904
Query: 362 QE 363
+
Sbjct: 905 TQ 906
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 201/425 (47%), Gaps = 3/425 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E FK + G P I++C L+ GL K + +V E + G P+
Sbjct: 121 VRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L +CK G++ L+++ PD+VTYNT++ + C G+L +A +
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+R PD++TYT L+ CKE V +A +L M +G PD+V+YN LI CKEG+
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L M G P+ T II++ GR + A + E+ R G S S ++
Sbjct: 298 LDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNI 357
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ Q G P+ YN L+ +LCK + A+ D MV R
Sbjct: 358 LINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY L+ C G+ AV +++++ G P +I+G + A
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL K D +Y+ + + +G + + + +G PN +T ++ L
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGL 537
Query: 601 WKGME 605
K +
Sbjct: 538 CKARQ 542
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 194/408 (47%), Gaps = 9/408 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+ + P Y I+ L + K AM++L ++ ++C V + LI T
Sbjct: 206 MSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR--QMQRECYPDVITYTILIEAT------ 257
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K + ++ K + D G +P +V+ N L+NG+ K +D+ + M G PN
Sbjct: 258 -CKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPN 316
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T NI+ C G FL ++ +G P +VT+N LI+ C+KG + A +
Sbjct: 317 VITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + P+ ++Y L++ LCK+ K+ A + MV RG PDIV+YNTL+ A CK+G
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 436
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ + +L ++ G P T ++ G K G+ A+ L+ E++ G+ Y
Sbjct: 437 KVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYS 496
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L ++ + A + + + G P+ YN +M LCK A+ MV R
Sbjct: 497 TLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR 556
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
KP+ ++Y LI G + EA+ L++E+ G++ S +V++
Sbjct: 557 GCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 180/394 (45%), Gaps = 35/394 (8%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + + + P +++ L+ K + + Q ++ +EM G P+ T+
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L + CK G +D+ FL + G P+++T+N ++ S C GR DA M R
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P +VT+ L+N LC++G + A + +M G +P+ +SYN L+ A CK+ KM+
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ G YPD T Y+ L+
Sbjct: 406 AIEYLDIMVSRGCYPDIVT-----------------------------------YNTLLT 430
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
ALC+D + A +L ++G G P L YN +++ L K DA+ L DEM + +KP
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY L+ G+ EA++ ++ E G+ P++ ++ G C + +A L
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+ + SY + A +G + +EL
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALEL 584
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N + L + + + ++MV R P + +LI C G++ +A +M+ + +
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
SG +PD VLI+GYC ++ A LL + D +YN + + G L +
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKE 230
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
ME+ R ++ P+ +T +I + K
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCK 259
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 2/412 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G++ + + F G + + LL+GLL + + V+ M P
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP 175
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+TH + + H C+ G ++ LE+ GF+P++V YN LI YC G + A ++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P++ TYT L++GLCK GKV A LF RMV GL P++V+Y LI C E
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G +Q + LL+ M NG+ P+ +T +++ K ++ A + L + GV ++ +Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ + AA L++++ +G+VP Y+ L++ LC+ ++ A L+ ++M++
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 479 RNIKPSLSTYRALICCFCG-IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ I+ S TY +I +G G + D+M+ +G+ PD V + YC E +
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPK-KIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
AE+++ + + +YN + +A G +S+ + + G+ PN
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 217/479 (45%), Gaps = 54/479 (11%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C +V + +LI K G + + F + ++ G +P++V+ L+ G
Sbjct: 243 CSPNVRTYTELIH-------GLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ +++ M G+ PN TF++L CK V++ FL + ++G + V Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA--------- 329
+LI CK G+++ A L + M +PD +Y++L++GLC++ K+ +A
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 330 --------------------------HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++F +M+ G++PDIV+Y + +YC+EG+M++
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++S++ +M+ G++P+ T +++GY G + A + + G + D Y L+
Sbjct: 476 AESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLR 535
Query: 424 ALCQDNRPFAATS------------LLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ + + + LLE I + + +IY+ + LC+ D + +A
Sbjct: 536 LVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKH 595
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
M + N+ PS Y ++I C C + +A++L+D M +SG LP + R++I+ C
Sbjct: 596 FFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLC 655
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ A+ + G K YD + + + G +++ L G+ P+N
Sbjct: 656 EGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN 714
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 162/328 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF+P+IV N L++G ++ +V+E M PN T+ L H CK+G V++
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ E G +P++VTY LI C +G L AF L +M ++P+ T++ L++
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK KV EA +V +G+ + V Y +LI CK GK+ + L+ +M+ G PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ ++ G ++ +L A ++ ++ G+ S Y +I L ++ + +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P + Y + S C+ + DA + +MVDR + P+L TY LI + +G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A S + M+ G P+ VL+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + +C GD+ L + G PD Y + + YC+ G L A ++
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF---------------HRMVH----- 338
+M R L TYT L++GL G VREA +F MVH
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 339 ---------------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G P+IV YN LI YC G+M+ + + M GN P+ T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G++ A+ L + G+ + Y LI C + A LL +
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G VP+ ++ L+++LCK + V +A L +V + +K + Y +LI C G+
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A LM +M+ G +PD+ LI+G C +K +++A +L +K +Y + +
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ ++ + + G P+ +T + S
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L TY TLI++YC G + A + + PD YT+ + G C+ G + A ++F
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M RG +Y L+ G ++E+ ++ M + PDT +V G +
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
GR A L+ E G + +Y+ LI C A + E + + P++ Y
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
EL+ LCK V A++L MV+ ++P++ TY ALI C G A L+ M
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G++P+ VLI+ C + V +A+ LG KK + Y ++ + + G +
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL ++ + GF P+ + +I L +
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 171/398 (42%), Gaps = 29/398 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I + + +K + GF P S + L++GL + + Q + E+M GI +
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ I+ + + +K+ G +PD+VTY + SYC++GR+ DA + M
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V P+LVTY TL+ G G V +A F MV +G P+ SY L+ K+
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSS 543
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
S + D Q++++ + E Q + ++ DIY
Sbjct: 544 DNSVDIWK-------IADMKDLQVLLED-------------ITERQ---LPLAADIYSCF 580
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ +R A + PS ++Y +++ C+ + DAL L D M
Sbjct: 581 IRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGY 640
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P L +YR +I C G A + ++L D + ++LI G + V + +
Sbjct: 641 LPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSS 700
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
LL K+ + + NA+ G+++ E+Q+
Sbjct: 701 LLSVM-KEHGYQPSNTINAMIT-----GEITVTNEVQE 732
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 4/154 (2%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P L N L+ +L + D L M RN++ TY LI +C G A
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQ 93
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ +L +G+ PDS + GYC + A + + + +Y A+ +
Sbjct: 94 HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + + M + AP+ M+H L
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGL 187
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 211/405 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F + +G P +V+ N L++G K +++ + EM + G +
Sbjct: 211 KQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVV 270
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + F K G ++K + +++ G ++VT +T + ++CK+G + +A L+ M
Sbjct: 271 TYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P+ TYT+L++G CK G++ +A L MVH+GL P++V+Y ++ CKEGK+
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ +L M G+ + ++ G+ AL+L+ E++ G+ + +Y L
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A SLL ++ G P+ IY +M++ K ++A+ L ++ D +
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ TY ALI C G EA+S D+M E G+ P+ Q+ LI+G+C ++KA
Sbjct: 511 QPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVH 570
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
L+ K D Y ++ + + GDL L+ + + G
Sbjct: 571 LMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 223/490 (45%), Gaps = 44/490 (8%)
Query: 131 LIVHILAWNN-KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW------AYVKV 183
L H+ A N F+ + LC+ ELV+ ++ V + C+ D Y K
Sbjct: 190 LFEHLPAPNVFTFNIVIDFLCKQGELVE--ARALFVRMKAMGCSPDVVTYNSLIDGYGKC 247
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E + G +V+ N L+N K I++ + + EM R+G+ N T
Sbjct: 248 GELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTL 307
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ FCK G V + ++ G P+ TY +L+ CK GRL+DA L M
Sbjct: 308 STFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH 367
Query: 304 RNVLPDLVTYTTLMNGLCKEGKV-----------------------------------RE 328
+ ++P++VTYT +++GLCKEGKV
Sbjct: 368 QGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSER 427
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L + M ++G+ D+ Y TLI+ CK K+ E+KSLL++M G+ P+T I+
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ K G+ A+ L+ ++ G+ + Y LI LC+ + A S +++ + G P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++++Y L++ CK S++ A+ L +EMVD+ + Y +LI G A +L
Sbjct: 548 NVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALK 607
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+M+E+G+ D I+G+C + +A +L D +YN + + +
Sbjct: 608 AKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKL 667
Query: 569 GDLSKLMELQ 578
G++ + LQ
Sbjct: 668 GNMEEASSLQ 677
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 165/368 (44%), Gaps = 35/368 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K GL+RE+ K F + G P+ + L++G K +D + +EM G+ P
Sbjct: 313 AFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVP 372
Query: 239 NTHTFNILTHVFCKNGDV---DKVNGFLEK------------------------------ 265
N T+ ++ CK G V D V +E+
Sbjct: 373 NVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLL 432
Query: 266 --IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ +G + D+ Y TLI CK +L++A L M + P+ V YTT+M+ K
Sbjct: 433 NEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK EA L H++ GL P++V+Y LI CK G + E+ S +M G+ P+
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ K G L A++L+ E+ G+S+ + +Y LI + A +L ++ +
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G L Y + C + + +A + EM+ I P + Y LI + +G E
Sbjct: 613 TGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEE 672
Query: 504 AVSLMDEM 511
A SL +EM
Sbjct: 673 ASSLQNEM 680
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 4/362 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+ L + +G +D L ++ + P+ T N ++ + N L R +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLAR----NRQGGLVRRL 190
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P++ T+ +++ LCK+G++ EA LF RM G SPD+V+YN+LI Y K G++
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E + L+ EM +G D T ++ + K G + A + E++R GV +
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ A C++ A L ++ G +P+ Y L++ CK + DA++L DEMV + +
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY ++ C G+ A ++ M +G+ + + LI+G+ M K+ +A
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALD 430
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL K D Y + + L + L + G PN + ++ + +
Sbjct: 431 LLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFF 490
Query: 602 KG 603
K
Sbjct: 491 KA 492
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 159/358 (44%), Gaps = 10/358 (2%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+P +VD C + + D+ + L + + L+P++ + + L C+ V+
Sbjct: 334 GMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGL-CKEGKVAV 392
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
+ +K Y ++H N A+ +L E+ K V ++ L
Sbjct: 393 ADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN--KGMELDVSLYGTL 450
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I W KV + E+ K D G +P+ V +++ K + +
Sbjct: 451 I-------WGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLH 503
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
++ G+ PN T+ L CK G + + +K+ E G DP++ Y TLI +CK G
Sbjct: 504 KIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIG 563
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
L+ A +L M + + D V YT+L++G K+G ++ A L +M+ GL D+ Y
Sbjct: 564 SLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYT 623
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
I +C MQE++ +L EM+G GI PD +++ Y K G + A +L E++
Sbjct: 624 CFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 179/334 (53%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ F G P+I + N L+ GL + + + EM + I PN TF++
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 337
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L ++FCK G+V + G L+ + E G +P++VTY++L++ Y + + +A L+ +M +
Sbjct: 338 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKG 397
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+ +Y L+NG CK ++ EA QLF+ M+H+GL+PDIVSYNTLI C+ G+++E+
Sbjct: 398 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L M+ NG PD T I++ G+ K+G L A L +Q + + +Y+ LI A+
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ A L + G P+++IY ++ LCK + +AL M + P+
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+Y +I F AV L+ EM E G + D
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 203/418 (48%), Gaps = 1/418 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI-DQCWQVYEEMGRIGICPNTHTFN 244
I ++ F L +P I+ N LL+ ++K+ D + ++M G+ P+T+T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
+L + F + VD L KI + G +VT+NTLI+ CK G+ A L+ M R
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+ TYTT++NGLCK G+ A LF +M G PD+V+Y+T+I + CK+ ++ E+
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ M GI P+ FT ++QG R A ++ E+ + + + LI
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C++ F A +L+ + + G P++ Y+ LM V +A L D M+ + KP
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ +Y LI +C R GEA L +EM+ G+ PD LI+G C + +A L
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +Y+ + + F + G L+K L + PN + +I ++ K
Sbjct: 462 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCK 519
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 199/411 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG ++ + F + G+QP + + ++NGL K+ ++ +MG G P+
Sbjct: 204 KVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVV 263
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + CK+ V++ ++ +G P++ TYN+LI C R +A + M
Sbjct: 264 TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM 323
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N++P++VT++ L+N CKEG V EA + M G+ P++V+Y++L+ Y + ++
Sbjct: 324 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 383
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ L M+ G PD F+ I++ GY K R+ A L E+ G++ Y+ L
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL 443
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LCQ R A L + + +G +P L Y+ L++ CK +A A L M +
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP++ Y LI C EA L E+ G+ P+ QI +ING C E +++A
Sbjct: 504 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ + SYN + F + D S+ ++L GF + T
Sbjct: 564 AFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 203/425 (47%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A VK+ ++ + K +++ G P + + L+N +L +D + V ++ ++G+
Sbjct: 130 AIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQ 189
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
TFN L + CK G + + + G+ PD+ TY T+I+ CK G A L
Sbjct: 190 LTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGL 249
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+R M PD+VTY+T+++ LCK+ +V EA +F M +G+SP+I +YN+LI C
Sbjct: 250 FRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 309
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ +E+ ++L EMM I P+ T +++ + KEG + A ++ + GV +
Sbjct: 310 FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 369
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ A L + + G P + YN L+ CK + +A L +EM+
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 429
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + P + +Y LI C +GR EA L ML +G LPD +L++G+C + +
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 489
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA L + + YN + + + +L + +L G PN +I
Sbjct: 490 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Query: 598 HSLWK 602
+ L K
Sbjct: 550 NGLCK 554
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 176/350 (50%), Gaps = 11/350 (3%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+ V+ AL F+++K I P Y ++ L +++ A ML E++
Sbjct: 273 CKDRRVNEALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMM------- 324
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S+++ ++++ + N + K G + E+ + ++G +P++V+ + L+NG
Sbjct: 325 -SLNIMPNIVTFSLLINI-FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + ++++ M G P+ ++NIL + +CK + + ++ +G PD+V+YNT
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI C+ GRL +A L++ M LPDL TY+ L++G CK+G + +A +LF M
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L P++V YN LI A CK ++E++ L E+ G+ P+ I+ G KEG L AL
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
++ G + Y+ +I Q A L+ + + G+V +
Sbjct: 563 EAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 7/230 (3%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
V + K C V + LI+ Y K I E+ + F + + G P IVS N L+
Sbjct: 392 VMITKGCKPDVFSYNILIN-------GYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+GL +L + + +++ M G P+ T++IL FCK G + K ++
Sbjct: 445 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 504
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++V YN LI + CK L +A L+ ++ + + P++ YTT++NGLCKEG + EA +
Sbjct: 505 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEA 564
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
F M G P+ SYN +I + + + L+ EM G D T
Sbjct: 565 FRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 2/412 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G++ + + F G + + LL+GLL + + V+ M P
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP 175
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+TH + + H C+ G ++ LE+ GF+P++V YN LI YC G + A ++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P++ TYT L++GLCK GKV A LF RMV GL P++V+Y LI C E
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G +Q + LL+ M NG+ P+ +T +++ K ++ A + L + GV ++ +Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ + AA L++++ +G+VP Y+ L++ LC+ ++ A L+ ++M++
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 479 RNIKPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ I+ S TY +I +G G + D+M+ +G+ PD V + YC E +
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPK-KIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
AE+++ + + +YN + +A G +S+ + + G+ PN
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 162/328 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF+P+IV N L++G ++ +V+E M PN T+ L H CK+G V++
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ E G +P++VTY LI C +G L AF L +M ++P+ T++ L++
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK KV EA +V +G+ + V Y +LI CK GK+ + L+ +M+ G PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ ++ G ++ +L A ++ ++ G+ S Y +I L ++ + +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P + Y + S C+ + DA + +MVDR + P+L TY LI + +G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A S + M+ G P+ VL+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + +C GD+ L + G PD Y + + YC+ G L A ++
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF---------------HRMVH----- 338
+M R L TYT L++GL G VREA +F MVH
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 339 ---------------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G P+IV YN LI YC G+M+ + + M GN P+ T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G++ A+ L + G+ + Y LI C + A LL +
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G VP+ ++ L+++LCK + V +A L +V + +K + Y +LI C G+
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A LM +M+ G +PD+ LI+G C +K +++A +L +K +Y + +
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ ++ + + G P+ +T + S
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 148/327 (45%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L TY TLI++YC G + A + + PD YT+ + G C+ G + A ++F
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M RG +Y L+ G ++E+ ++ M + PDT +V G +
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
GR A L+ E G + +Y+ LI C A + E + + P++ Y
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
EL+ LCK V A++L MV+ ++P++ TY ALI C G A L+ M
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G++P+ VLI+ C + V +A+ LG KK + Y ++ + + G +
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
EL ++ + GF P+ + +I L
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGL 397
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 158/364 (43%), Gaps = 47/364 (12%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++H L + K AM + +VE +V + LI CN +++
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVE--AGLEPNVVTYTALIQ--GQCNEGHLQC 300
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+F+ G P+ + + L++ L K +++ + + G+ N +
Sbjct: 301 -----AFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L CK G +D + ++K+ EGF PD +Y++LI C++ +L+ A + M
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 304 RNVL-----------------------------------PDLVTYTTLMNGLCKEGKVRE 328
+ + PD+VTYT + C+EG++ +
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + +MV RG+ P++V+YNTLI Y G + ++ S M+G G P+ + ++++
Sbjct: 476 AESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLR 535
Query: 389 GYGKEGRLLSALNL--VVELQRFGVSISRDI-YDYLIVALCQDNRPFAATSLLERIGQDG 445
K+ +++++ + +++ S +I + LI L Q +SLL + + G
Sbjct: 536 LVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHG 595
Query: 446 YVPS 449
Y PS
Sbjct: 596 YQPS 599
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 4/154 (2%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P L N L+ +L + D L M RN++ TY LI +C G A
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQ 93
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ +L +G+ PDS + GYC + A + + + +Y A+ +
Sbjct: 94 HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + + M + AP+ M+H L
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGL 187
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 207/410 (50%), Gaps = 2/410 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E+F+ ++ ++ G QPS + L+ + D+ ++ +EM PN H
Sbjct: 277 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 336
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C+ G +++ NG K+ + G P ++T+N LI+ YCK+G + AF L +M
Sbjct: 337 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 396
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ N P++ TY LM GLC+ K +A L R+V GL PD V+YN L+ +CKEG++
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 456
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++ M G+ PD FT ++ G K GRL A ++ + + G+S+ + L
Sbjct: 457 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + L E + ++ + + +N +++L K + +A + +M+ +
Sbjct: 517 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 576
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
PS+ T+ LI C G + ++ +++ M ++G P+ ++ING C V +AE
Sbjct: 577 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 636
Query: 542 LLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+L F F + +Y + + G L + ++ ++ G PN+
Sbjct: 637 IL-FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNS 685
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 216/476 (45%), Gaps = 31/476 (6%)
Query: 96 SRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
S VL C+ D + A F + + +P S Y +++H L + A ++ E+VE
Sbjct: 234 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 293
Query: 155 LVKDCPHSVDVFQDLI----------------------SCTEDCNWAYVKV------GLI 186
K C S + LI +C + + + + G I
Sbjct: 294 --KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 351
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ FRK L G P I++ N L+NG K + +Q+ M + PN T+N L
Sbjct: 352 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 411
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C+ K L ++ + G PD VTYN L+ +CK+G+LN AF ++ M +
Sbjct: 412 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 471
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD T+T L++GLCK G++ +A+ + MV +G+S D V++ LI +CK GK ++
Sbjct: 472 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 531
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L M+ N T + GK+ +L A ++ ++ ++G+ S + LI C
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + +LER+ Q G P++ Y ++ LC V +A + M + P+
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 651
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY L+ GR A ++ M+++G P+S I L++G+ + A AL
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 707
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 205/428 (47%), Gaps = 9/428 (2%)
Query: 188 ESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+F+ F K + + +P+ V+ + L++GL + +++ +Q+ +EM G P+T T+ +L
Sbjct: 247 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 306
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C G DK L+++ + P++ TY LI C++G++ +A ++R M + +
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 366
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
P ++T+ L+NG CKEG V A QL M P+I +YN L+ C+ K ++
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 426
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL ++ NG+ PD T I+V G+ KEG+L A N+ + G+ + LI LC
Sbjct: 427 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 486
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A +L + + G + L++ CK D L + MV+ L+
Sbjct: 487 KLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR---CLT 543
Query: 487 TYRALICCFCGIGRS---GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
T C +G+ EA +++ +M++ G++P +LI G+C + + +L
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +Y + N +G + + + G +PN+ T ++ + K
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 663
Query: 604 --MERKFQ 609
++R FQ
Sbjct: 664 GRLDRAFQ 671
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 217/490 (44%), Gaps = 40/490 (8%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCL-------IVH 134
LK L H+ H +++ QS++V + FF WV S+YC ++
Sbjct: 60 LKSLASHMTPHLAGKII-GLQSNNVELGVRFFKWV-------CRQSSYCYDLDGRIQLLG 111
Query: 135 ILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFR 194
+L + F A K +V L+++C ED VK+
Sbjct: 112 VLVSRDLFGVAQK---AVVLLIQEC--------------EDSENGVVKL------MGALD 148
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
++GF+ S + LL L KLN + VY M G + + + CKNG
Sbjct: 149 GMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG 208
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTY 313
V F K+ GF D +L+ + C++ L +AF ++ M + N P+ VTY
Sbjct: 209 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTY 268
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+ L++GLC+ G++ EA QL MV +G P +Y LI A C G ++ +L EM
Sbjct: 269 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 328
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
P+ T I++ +EG++ A + ++ + G+ ++ LI C++ +
Sbjct: 329 KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVS 388
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A LL + + P++ YNELME LC+ A LL +VD + P TY L+
Sbjct: 389 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
FC G+ A ++ + M +G+ PD LI+G C + +A +LG KK
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508
Query: 554 DTESYNAVFN 563
D ++ A+ +
Sbjct: 509 DEVTFTALID 518
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 166/390 (42%), Gaps = 58/390 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI-- 236
+ K G + +F F G +P + L++GL KL ++Q + M + GI
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508
Query: 237 --------------------------------CPNT-HTFNILTHVFCKNGDVDKVNGFL 263
C T HTFN K+ +++ N L
Sbjct: 509 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 568
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
K+ + G P +VT+ LI +C+ G + + M + P++ TYT ++NGLC
Sbjct: 569 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 628
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V EA + M G+SP+ +Y L+ A+ K G++ + ++ M+ NG P++
Sbjct: 629 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 688
Query: 384 QIIVQGY-----GKEGRLLSALN----------------LVVELQRFGVSISRDIYDYLI 422
++ G+ R LS+ L E+++ GV + D+Y++L+
Sbjct: 689 SALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVP-TEDLYNFLV 747
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
V LC++ R A L + + + G P I + ++E CK + L ++D
Sbjct: 748 VGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFV 806
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEML 512
PS ++Y +I GR EA L+ +++
Sbjct: 807 PSFASYCWVIHGLRNEGRVQEAQKLVSDLV 836
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 165/382 (43%), Gaps = 37/382 (9%)
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+NG V K+ G L+ + E GF Y+TL+ K AF +YR M + +
Sbjct: 137 ENGVV-KLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 195
Query: 312 TYTTLMNGLCKEGKVR-----------------------------------EAHQLFHRM 336
Y T++N LCK G V+ EA ++F +M
Sbjct: 196 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 255
Query: 337 V-HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
P+ V+Y+ LI C+ G+++E+ L EM+ G P T T ++++ G
Sbjct: 256 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 315
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
A+ ++ E+ + Y LI LC++ + A + ++ + G P + +N
Sbjct: 316 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ CK V A L M N KP++ TY L+ C + +S +A L+ ++++G
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+LPD +L++G+C E +N A + D ++ A+ + + G L +
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495
Query: 576 ELQKRFLRLGFAPNNLTCKYMI 597
+ ++ G + + +T +I
Sbjct: 496 GILGSMVKKGISLDEVTFTALI 517
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 23/251 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G S K + G P++ + ++NGL +++ + M G+ P
Sbjct: 589 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 648
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC------------ 286
N T+ +L K G +D+ + + + G P+ Y+ L+S +
Sbjct: 649 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALS 708
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVT---------YTTLMNGLCKEGKVREAHQLFHRMV 337
G L DA L N L + + Y L+ GLCKEG++ EA QL MV
Sbjct: 709 STGDL-DARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMV 767
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
GL PD + +++I YCK K + ++ N P + ++ G EGR+
Sbjct: 768 KHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQ 826
Query: 398 SALNLVVELQR 408
A LV +L R
Sbjct: 827 EAQKLVSDLVR 837
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 28/191 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI----------------- 221
A+VK G + +F+ + G QP+ + LL+G + N
Sbjct: 659 AHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSL 718
Query: 222 ------DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ C E+ + G+ P +N L CK G + + + + + + G PD
Sbjct: 719 SSEENDNNCLS--NEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 775
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+++I YCK + ++ +++ +P +Y +++GL EG+V+EA +L
Sbjct: 776 AI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSD 834
Query: 336 MV-HRGLSPDI 345
+V H G+ ++
Sbjct: 835 LVRHTGIEEEV 845
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
NFL+ GL K I + Q+ ++M + G+ P+ +I+ H +CK D F++ + +
Sbjct: 744 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLD 802
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F P +Y +I +GR+ +A L + R + + V T + L KE
Sbjct: 803 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 857
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 203/400 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D E+M +GI N +T+NIL + FC+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT N+L++ +C R++DA L M PD VT+TTL++GL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG PD+V+Y ++ CK G + +LL +M I +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K ALNL E++ GV + Y LI LC R A+ LL +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L ++ L+++ K + A L +EM+ R+I P++ TY +LI FC + R G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA +++ M+ LP+ LING+C K V+K L +++ + +T +Y +
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + +G PN LT ++ L K
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 188/385 (48%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D ++ M + P+ F+ L K D V F EK+E G +L TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ +C+ RL+ A L M + PD+VT +L+NG C ++ +A L +MV G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD V++ TLI K E+ +L+ M+ G PD T +V G K G AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
NL+ +++ + + IY +I +LC+ A +L + G P++ Y+ L+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C +DA L +M++R I P+L T+ ALI F G+ +A L +EM++ + P+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LING+CM + +A+ +L +K + + +YN + N F + + K MEL +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGME 605
+ G N +T +IH ++ +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARD 443
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 180/375 (48%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +G++P IV+ N LLNG N I + ++M +G P+T TF L H +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+ ++++ + G PDLVTY +++ CK+G + A L M + ++V Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T+++ LCK +A LF M ++G+ P++++Y++LI C G+ ++ LL +M+
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
I P+ T ++ + K+G+L+ A L E+ + + + Y LI C +R A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+LE + + +P++ YN L+ CK V + L EM R + + TY LI
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F A + +M+ G+ P+ +L++G C + KA + + + D
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 555 TESYNAVFNMFAEDG 569
+YN + + G
Sbjct: 498 IYTYNIMIEGMCKAG 512
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 177/361 (49%), Gaps = 9/361 (2%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
N+ S A+ ++ ++VE+ P +V F LI N A V LI + +
Sbjct: 162 NRISDAVALVDQMVEMGYK-PDTV-TFTTLIHGLFLHNKASEAVALID-------RMVQR 212
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K D + +M I N ++ + CK D
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++E +G P+++TY++LIS C GR +DA L M R + P+LVT++ L++
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
K+GK+ +A +L+ M+ R + P+I +Y++LI +C ++ E+K +L M+ P+
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ G+ K R+ + L E+ + G+ + Y LI Q A + +
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P++ YN L++ LCK +A A+++ + + ++P + TY +I C G
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 500 R 500
+
Sbjct: 513 K 513
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 168/345 (48%), Gaps = 9/345 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
++ KP + + ++H L +NK S A+ ++ +V+ + C DL++ N
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ--RGCQ------PDLVTYGAVVN- 226
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K G + K + ++V + +++ L K D ++ EM G+ P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L C G + L + E +P+LVT++ LI ++ KKG+L A LY
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R++ P++ TY++L+NG C ++ EA Q+ M+ + P++V+YNTLI +CK
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ + L EM G+ +T T ++ G+ + +A + ++ GV + Y
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ L+ LC++ + A + E + + P + YN ++E +CK
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISR--VLLRCQSDSV--- 107
P+ +V+ +C K+GD+ L L LL + A +I V+ DS+
Sbjct: 216 PDLVTYGAVVNGLC---KRGDTDLAL------NLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 108 ----SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
AL F ++N ++P Y ++ L ++S A ++L +++E K P+ V
Sbjct: 267 RHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLV 324
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
F LI A+VK G + ++ K + + + P+I + + L+NG L+ + +
Sbjct: 325 -TFSALID-------AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
Q+ E M R PN T+N L + FCK VDK ++ + G + VTY TLI
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ + ++A +++ M V P+++TY L++GLCK GK+ +A +F + + P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 344 DIVSYNTLIFAYCKEGK 360
DI +YN +I CK GK
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 207/412 (50%), Gaps = 2/412 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G++ + + F G + + LL+GLL + + V+ M P
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAP 175
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+TH + + H C+ G ++ LE+ GF+P++V YN LI YC G + A ++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P++ TYT L++GLCK GKV A LF RMV GL P++V+Y LI C E
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G +Q + LL+ M NG+ P+ +T +++ K ++ A + L + GV ++ +Y
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ + AA L++++ +G+VP Y+ L++ LC+ ++ A L+ ++M++
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME 415
Query: 479 RNIKPSLSTYRALICCFCG-IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ I+ S TY +I +G G + D+M+ +G+ PD V + YC E +
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPK-KIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
AE+++ + + +YN + +A G +S+ + + G+ PN
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPN 526
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 162/328 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF+P+IV N L++G ++ +V+E M PN T+ L H CK+G V++
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ E G +P++VTY LI C +G L AF L +M ++P+ T++ L++
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK KV EA +V +G+ + V Y +LI CK GK+ + L+ +M+ G PD
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ ++ G ++ +L A ++ ++ G+ S Y +I L ++ + +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P + Y + S C+ + DA + +MVDR + P+L TY LI + +G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A S + M+ G P+ VL+
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 168/396 (42%), Gaps = 35/396 (8%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + +C GD+ L + G PD Y + + YC+ G L A ++
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF---------------HRMVH----- 338
+M R L TYT L++GL G VREA +F MVH
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 339 ---------------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G P+IV YN LI YC G+M+ + + M GN P+ T
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G++ A+ L + G+ + Y LI C + A LL +
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G VP+ ++ L+++LCK + V +A L +V + +K + Y +LI C G+
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A LM +M+ G +PD+ LI+G C +K +++A +L +K +Y + +
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ ++ + + G P+ +T + S
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRS 466
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 168/361 (46%), Gaps = 48/361 (13%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F + ++ G +P++V+ L+ G + +++ M G+ PN
Sbjct: 259 KSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF++L CK V++ FL + ++G + V Y +LI CK G+++ A L + M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREA-------------------------------- 329
+PD +Y++L++GLC++ K+ +A
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438
Query: 330 ---HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++F +M+ G++PDIV+Y + +YC+EG+M++++S++ +M+ G++P+ T +
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS---------- 436
++GY G + A + + G + D Y L+ + + + +
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDL 558
Query: 437 --LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI-C 493
LLE I + + +IY+ + LC+ D + +A M + N+ PS Y ++I C
Sbjct: 559 QVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDC 618
Query: 494 C 494
C
Sbjct: 619 C 619
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L TY TLI++YC G + A + + PD YT+ + G C+ G + A ++F
Sbjct: 71 NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF 130
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M RG +Y L+ G ++E+ ++ M + PDT +V G +
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
GR A L+ E G + +Y+ LI C A + E + + P++ Y
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
EL+ LCK V A++L MV+ ++P++ TY ALI C G A L+ M
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G++P+ VLI+ C + V +A+ LG KK + Y ++ + + G +
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL ++ + GF P+ + +I L +
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 4/154 (2%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P L N L+ +L + D L M RN++ TY LI +C G A
Sbjct: 38 LPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQ 93
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ +L +G+ PDS + GYC + A + + + +Y A+ +
Sbjct: 94 HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLL 153
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + + M + AP+ M+H L
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGL 187
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 19/400 (4%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ V D+ +C+ + +K G ++E+ K F + + G P + + + L++G K
Sbjct: 317 HALGVLPDVQTCSAFIH-GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 375
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+++ +++++EM GI PN +N L CK+GD+ + + + E+G +PD VTY+T
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYST 435
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+I YCK + +AF L+ M + V P Y L++G CKEG + +A LF M+ +G
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ + S+NTLI YCK K+QE+ L EM+ I PD T ++ + K G++ A
Sbjct: 496 FATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEAN 554
Query: 401 NLVVELQRF-----------------GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
L E+Q GV Y +I A C+++ A L + +
Sbjct: 555 LLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 614
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G + I++ L+ +LCK + + +A L DEM + +KPSL+ L+ F G+ E
Sbjct: 615 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 674
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
A + + + G++PD+ L+NG + D A L+
Sbjct: 675 ATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 714
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 208/486 (42%), Gaps = 75/486 (15%)
Query: 177 NWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ + GL R E+ TF + G +P +C+ L++G ++ ID+ ++ + M
Sbjct: 12 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 71
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
GI N T+N+L H CK G ++K L+ + G P+ T+ LI YC++ +
Sbjct: 72 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 131
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLC------------------------------ 321
A L M +RN++P V+Y ++NGLC
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191
Query: 322 -----KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
EG++ EA +L M G++PDI YN +I K GKM+E+ + L E+ G G+
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 251
Query: 377 YPDTFTCQIIVQGYGKEGR-----------------------------------LLSALN 401
PD T + GY K G+ L+ AL+
Sbjct: 252 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 311
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ L GV I L ++ R A + + + G VP + Y+ L+ C
Sbjct: 312 IFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 371
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V A L DEM + I P++ Y AL+ C G A L D M E G+ PDS
Sbjct: 372 KQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV 431
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+I+GYC ++V +A +L K + YNA+ + ++GD+ K M L +
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREM 491
Query: 582 LRLGFA 587
L+ GFA
Sbjct: 492 LQKGFA 497
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 203/425 (47%), Gaps = 19/425 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+ K F + LD G P+ L+NG K + + ++ + +G+ P
Sbjct: 264 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP 323
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T + H KNG V + +++E+G PD+ TY++LIS +CK+G + AF L+
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 383
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P++ Y L++GLCK G ++ A +LF M +GL PD V+Y+T+I YCK
Sbjct: 384 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 443
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ SL +EM G+ P +F +V G KEG + A+NL E+ + G + + +
Sbjct: 444 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-F 502
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ + A+ L + + +P Y +++ CK + +A LL EM +
Sbjct: 503 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 562
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ +L ++M+ G+ PD ++I +C E ++ +
Sbjct: 563 RNLIVD------------------TVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 604
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K + ++ + + DL++ +L LG P+ C ++
Sbjct: 605 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVR 664
Query: 599 SLWKG 603
S +
Sbjct: 665 SFHEA 669
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 199/446 (44%), Gaps = 36/446 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + + + +G +P+ + L+ G + + + + ++ +EM + + P+
Sbjct: 92 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAV 151
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ + + C D+ N LEK+ G P++V Y+TLI Y +GR+ +A L M
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD+ Y +++ L K GK+ EA + RGL PD V++ I Y K GKM
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271
Query: 362 QESKSLLYEMM---------------------GN--------------GIYPDTFTCQII 386
E+ EM+ GN G+ PD TC
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G K GR+ AL + EL+ G+ Y LI C+ A L + + G
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ IYN L++ LCK + A L D M ++ ++P TY +I +C EA S
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L EM G+ P S + L++G C E D+ KA L +K T S+N + + +
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK-GFATTLSFNTLIDGYC 510
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLT 592
+ + + +L + + P+++T
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVT 536
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 216/469 (46%), Gaps = 18/469 (3%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCN 177
L KP S +CL++ + A+++L E+ + LV + L C +D +
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC-KDLS 167
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A K K G +P++V + L+ G I++ ++ + M G+
Sbjct: 168 LAN----------KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVA 217
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ +N + K G +++ + +L +I+ G PD VT+ I Y K G++ +A
Sbjct: 218 PDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKY 277
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M ++P+ YT L+NG K G + EA +F + G+ PD+ + + I K
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++QE+ + E+ G+ PD FT ++ G+ K+G + A L E+ G++ + I
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ LC+ A L + + + G P Y+ +++ CK ++VA+A L EM
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ ++P Y AL+ C G +A++L EML+ G LI+GYC +
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NTLIDGYCKSCKIQ 516
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK----LMELQKRFL 582
+A L K + D +Y V + + G + + E+Q+R L
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 565
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 183/381 (48%), Gaps = 2/381 (0%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
MG G+ PNT+T+ I+T C+ +++ E++++ G PD + LI + ++G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+++ + +M + +L+TY L++GLCK GK+ +A ++ M+ G P+ ++
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YC+E M + LL EM + P + ++ G L A L+ ++ G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + +Y LI+ + R A LL+ + G P + YN ++ L K + +A
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
E+ R +KP T+ A I + G+ EA DEML+ G++P++ + VLING+
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
++ +A ++ + D ++ +A + ++G + + +++ G P+
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360
Query: 591 LTCKYMIHSLWKG--MERKFQ 609
T +I K +E+ F+
Sbjct: 361 FTYSSLISGFCKQGEVEKAFE 381
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 18/242 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ FR+ L GF ++ S N L++G K I + Q+++EM I P+
Sbjct: 477 KEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHV 535
Query: 242 TFNILTHVFCKNGD-----------------VDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
T+ + CK G VD V EK+ +G PD VTY +I +
Sbjct: 536 TYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYA 595
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+CK+ L +AF L + + +L + L+ LCK + EA +L M GL P
Sbjct: 596 HCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPS 655
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+ + +TL+ ++ + GKM E+ + + G+ PDT T +V G + A NL+
Sbjct: 656 LAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 715
Query: 405 EL 406
+L
Sbjct: 716 QL 717
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 216/450 (48%), Gaps = 43/450 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
A VK G + E+F+ F +++ Q P++V+ ++NGL K +D+ ++ + M G
Sbjct: 109 ALVKSGRVEEAFQIF-ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGC 167
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
CPN T+++L CK G DK L+++ GF PD++ YNTL++ CK RL++A
Sbjct: 168 CPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L ++M R P +VTY +LM C+ +V A +L M RG PD+++YNT+I C
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR------LLSALNLVVELQRFG 410
++ ++ ++++LL +M+ PD T I+ G K+ R L +A ++ +++ G
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC------- 463
+ Y +I LC+ + A +LL R+ VP L ++ ++ SLCK
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407
Query: 464 -------------DSVADALLL----KDEMVDRNIK----------PSLSTYRALICCFC 496
+ VA A L+ K VD+ ++ P ++TY +++ C
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLC 467
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+GR EAV +++ M+ PD LI G C V +A L K +
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
YN + N + LS + + + G+
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 203/432 (46%), Gaps = 10/432 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G ++ + FR+ V P+ + L++GL K +DQ +++ +EM GI P
Sbjct: 9 VRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGV 65
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
N + CK G G+ + + PD++T+N L+ + K GR+ +AF ++
Sbjct: 66 AVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFES 125
Query: 301 MYRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M+ + LP++VTYTT++NGLCK+GK+ A +L M G P++++Y+ L+ CK G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + +LL EM G PD ++ G K RL AL LV + R G + Y+
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ C+ + A L++ + + G P + YN ++ LC+ + DA L +MV
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305
Query: 480 NIKPSLSTYRALICCFCGIGRSG------EAVSLMDEMLESGMLPDSQICRVLINGYCME 533
P + TY +I C R A +++ M ++G P++ V+I G C
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ +A ALL + D S++ V + DL ++ PN +
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425
Query: 594 KYMIHSLWKGME 605
+I L KG E
Sbjct: 426 AALIDGLSKGGE 437
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 4/330 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LN L++ Q Q++ E + PN T+ L H CK G +D+ L+++ +
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P + +N +I CK GR DA ++ + PD++T+ L++ L K G+V E
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 329 AHQLFHRM-VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A Q+F M P++V+Y T+I CK+GK+ + LL M G P+ T ++V
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+G K GR L+ E+ R G +Y+ L+ LC+ R A L++ + + G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN LME C+ V A L M +R P + Y +I C R +A +L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +M+ + +PD +I+G C + V+
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVD 328
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 192/449 (42%), Gaps = 84/449 (18%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F + + P Y +++ L + K A+++L +L+ CP+ + +
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL-DLMNETGCCPNVI-TYSV 176
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ K G + F ++ GFQP ++ N LLNGL K +D+ ++
Sbjct: 177 LVE-------GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M R G P T+N L +FC++ VD+ ++ + E G PD++ YNT+I+ C+
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV------REAHQLFHRMVHRGLS 342
RL+DA L + M +PD++TY+T+++GLCK+ +V A ++ M G
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD--TFTCQI--------------- 385
P+ +Y +I C+ K Q++ +LL M+ + + PD +F+ I
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Query: 386 ------------------IVQGYGKEGRLLSALN---LVVELQRFGVSISRDI------- 417
++ G K G + A+ L+VE R GV+ +
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGV 469
Query: 418 ------------------------YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
Y LI LC+ + A L + + G+ + +Y
Sbjct: 470 GRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVY 529
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIK 482
N L+ LCK ++DA + +++++ K
Sbjct: 530 NVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 54/330 (16%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ N N ++ +C D+ L +D + LL + V RC D ++ T
Sbjct: 274 PDVINYNTVIAGLCR-----DARL----DDAQALLKQM-------VAARCVPDVITYSTI 317
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVFQDLI 170
+ + D W + ++ CE++E++K CP +
Sbjct: 318 IDGLCKD------------------WRVDADWKLEAACEILEMMKQTGCPPNAG------ 353
Query: 171 SCTEDCNWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+A V GL R ++ R+ +D P + S + ++ L K + +D +
Sbjct: 354 ------TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+++ M PN + L K G+VDK E + E F P + TYN+++
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGL 466
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C GR+ +A + M + PD +Y L+ GLC+ V EA++LF + +G + ++
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
YN L+ CK+ ++ ++ + +++ G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 153/367 (41%), Gaps = 17/367 (4%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKP-LLPHLGAHEISRVLLRCQSDSVS 108
F P+ N +++ +C S ++ D L L+Q ++ P + + S + L C+S V
Sbjct: 201 GFQPDVIMYNTLLNGLCKS-RRLDEALELVQLMIRSGCYPTVVTYN-SLMELFCRSKQVD 258
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
V ++ P NY ++ L + + A +L ++V C V +
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV--AARCVPDVITYST 316
Query: 169 LIS--CTE---DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+I C + D +W I E K G P+ + ++ GL + Q
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMK------QTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+ M + P+ +F+++ CK+ D+D + E P+ V Y LI
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
K G ++ A ++ +M + P + TY ++++GLC G++ EA ++ M+H+ P
Sbjct: 431 GLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D SY LI C+ ++E+ L + G + ++V K+ RL A +
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549
Query: 404 VELQRFG 410
+L G
Sbjct: 550 NKLIEAG 556
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 222/484 (45%), Gaps = 10/484 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P ++ Y I+ L N + A L ++ ++C SV + L+ A
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSA---LVHYRDMQRNCAPSVITYTILVD-------ALC 247
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K I ++ ++ G P++V+ N L+NG KL +D+ ++ +M P+
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 307
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NIL +CK L+++ + G +P+ +TYNTL+ S K G+ DAF L ++M
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RR+ P T+ +++ CK G++ A++LF M RG PDI +YN +I C+ ++
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 427
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ LL M G PD T IV G K ++ A + L+ G + L
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A LL + ++G P + Y L+ CK D + +L EM+D+
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY +I C R + L+ MLE G+ PD+ + +I+G C ++A
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE 607
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + +YN + + + L + + L + G P+ +T + W
Sbjct: 608 LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFW 667
Query: 602 KGME 605
K E
Sbjct: 668 KSAE 671
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 174/372 (46%), Gaps = 7/372 (1%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
L +DC S F +I + KVG + +++ F+ D G P I + N +++G
Sbjct: 368 LRRDCKPSHFTFNLMID-------MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISG 420
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+ N ID Q+ E M G P+ T+N + CK VD+ E + G+ D
Sbjct: 421 ACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 480
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+VT +TLI CK RL+DA L R M R PD+V YT L++G CK ++ ++ F
Sbjct: 481 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M+ +G P +++Y+ +I CK ++++ LL M+ G+ PD ++ G K
Sbjct: 541 EMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSD 600
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
A L +++ G + + Y+ L+ LC+ +R A LLE + DG +P YN
Sbjct: 601 SYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYN 660
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ + K A L M R P+ Y L+ + +A+ + +E LE+
Sbjct: 661 SVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEA 720
Query: 515 GMLPDSQICRVL 526
G D +I R L
Sbjct: 721 GADVDPEISRTL 732
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 158/336 (47%), Gaps = 9/336 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++ N+ A ++L + E CP V + ++S K
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTE--AGCPPDVVTYNSIVS-------GLCKA 459
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+++ + + G+ +V+C+ L++GL K +D ++ EM R G P+ +
Sbjct: 460 SQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAY 519
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL H FCK +DK F ++ ++G P ++TY+ +I CK R+ D L + M
Sbjct: 520 TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE 579
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R V PD + YT++++GLCK EA++L+ M G +P +V+YN L+ CK ++ E
Sbjct: 580 RGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDE 639
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M +G PDT T + G+ K A L ++ G S + +Y L+
Sbjct: 640 AIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLT 699
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L + + A + E + G EI L ++
Sbjct: 700 KLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQN 735
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 140/294 (47%), Gaps = 5/294 (1%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHR-GL-SPDIVSYNTLIFAYCKEGKMQESKSLLY 369
T L++ ++ K +EA+ LF HR GL SPD ++Y+TLI +CK Q++ LL
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKN--HRCGLCSPDSITYSTLINGFCKARDFQQAYRLLD 191
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM GI P I++G GR+ SAL ++QR + S Y L+ ALC+
Sbjct: 192 EMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSA 250
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
R A+ +LE + + G P++ YN L+ CK ++ +A++L ++M++ + P + TY
Sbjct: 251 RISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYN 310
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI +C R + L+ EM++ G P+ L++ A L ++
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++N + +MF + G L EL + G P+ T MI +
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 424
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 216/450 (48%), Gaps = 43/450 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
A VK G + E+F+ F +++ Q P++V+ ++NGL K +D+ ++ + M G
Sbjct: 109 ALVKSGRVEEAFQIF-ESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGC 167
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
CPN T+++L CK G DK L+++ GF PD++ YNTL++ CK RL++A
Sbjct: 168 CPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE 227
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L ++M R P +VTY +LM C+ +V A +L M RG PD+++YNT+I C
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR------LLSALNLVVELQRFG 410
++ ++ ++++LL +M+ PD T I+ G K+ R L +A ++ +++ G
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC------- 463
+ Y +I LC+ + A +LL R+ VP L ++ ++ SLCK
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407
Query: 464 -------------DSVADALLL----KDEMVDRNIK----------PSLSTYRALICCFC 496
+ VA A L+ K VD+ ++ P ++TY +++ C
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLC 467
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+GR EAV +++ M+ PD LI G C V +A L K +
Sbjct: 468 GVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVG 527
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
YN + N + LS + + + G+
Sbjct: 528 VYNVLVNELCKKKRLSDAHGVANKLIEAGY 557
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 203/432 (46%), Gaps = 10/432 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G ++ + FR+ V P+ + L++GL K +DQ +++ +EM GI P
Sbjct: 9 VRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGV 65
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
N + CK G G+ + + PD++T+N L+ + K GR+ +AF ++
Sbjct: 66 AVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFES 125
Query: 301 MYRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M+ + LP++VTYTT++NGLCK+GK+ A +L M G P++++Y+ L+ CK G
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + +LL EM G PD ++ G K RL AL LV + R G + Y+
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ C+ + A L++ + + G P + YN ++ LC+ + DA L +MV
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305
Query: 480 NIKPSLSTYRALICCFCGIGRSG------EAVSLMDEMLESGMLPDSQICRVLINGYCME 533
P + TY +I C R A +++ M ++G P++ V+I G C
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ +A ALL + D S++ V + DL ++ PN +
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425
Query: 594 KYMIHSLWKGME 605
+I L KG E
Sbjct: 426 AALIDGLSKGGE 437
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 161/330 (48%), Gaps = 4/330 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LN L++ Q Q++ E + PN T+ L H CK G +D+ L+++ +
Sbjct: 2 NCALNLLVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P + +N +I CK GR DA ++ + PD++T+ L++ L K G+V E
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 329 AHQLFHRM-VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A Q+F M P++V+Y T+I CK+GK+ + LL M G P+ T ++V
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+G K GR L+ E+ R G +Y+ L+ LC+ R A L++ + + G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN LME C+ V A L M +R P + Y +I C R +A +L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +M+ + +PD +I+G C + V+
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVD 328
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 192/449 (42%), Gaps = 84/449 (18%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F + + P Y +++ L + K A+++L +L+ CP+ + +
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELL-DLMNETGCCPNVI-TYSV 176
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ K G + F ++ GFQP ++ N LLNGL K +D+ ++
Sbjct: 177 LVE-------GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M R G P T+N L +FC++ VD+ ++ + E G PD++ YNT+I+ C+
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV------REAHQLFHRMVHRGLS 342
RL+DA L + M +PD++TY+T+++GLCK+ +V A ++ M G
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP 349
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD--TFTCQI--------------- 385
P+ +Y +I C+ K Q++ +LL M+ + + PD +F+ I
Sbjct: 350 PNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKI 409
Query: 386 ------------------IVQGYGKEGRLLSALN---LVVELQRFGVSISRDI------- 417
++ G K G + A+ L+VE R GV+ +
Sbjct: 410 FGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGV 469
Query: 418 ------------------------YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
Y LI LC+ + A L + + G+ + +Y
Sbjct: 470 GRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVY 529
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIK 482
N L+ LCK ++DA + +++++ K
Sbjct: 530 NVLVNELCKKKRLSDAHGVANKLIEAGYK 558
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 54/330 (16%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ N N ++ +C D+ L +D + LL + V RC D ++ T
Sbjct: 274 PDVINYNTVIAGLCR-----DARL----DDAQALLKQM-------VAARCVPDVITYSTI 317
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVFQDLI 170
+ + D W + ++ CE++E++K CP +
Sbjct: 318 IDGLCKD------------------WRVDADWKLEAACEILEMMKQTGCPPNAG------ 353
Query: 171 SCTEDCNWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+A V GL R ++ R+ +D P + S + ++ L K + +D +
Sbjct: 354 ------TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAY 407
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+++ M PN + L K G+VDK E + E F P + TYN+++
Sbjct: 408 KIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSVLDGL 466
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C GR+ +A + M + PD +Y L+ GLC+ V EA++LF + +G + ++
Sbjct: 467 CGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEV 526
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
YN L+ CK+ ++ ++ + +++ G
Sbjct: 527 GVYNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 153/367 (41%), Gaps = 17/367 (4%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKP-LLPHLGAHEISRVLLRCQSDSVS 108
F P+ N +++ +C S ++ D L L+Q ++ P + + S + L C+S V
Sbjct: 201 GFQPDVIMYNTLLNGLCKS-RRLDEALELVQLMIRSGCYPTVVTYN-SLMELFCRSKQVD 258
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
V ++ P NY ++ L + + A +L ++V C V +
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMV--AARCVPDVITYST 316
Query: 169 LIS--CTE---DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+I C + D +W I E K G P+ + ++ GL + Q
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMK------QTGCPPNAGTYAVVIEGLCRARKSQQ 370
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+ M + P+ +F+++ CK+ D+D + E P+ V Y LI
Sbjct: 371 ALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALID 430
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
K G ++ A ++ +M + P + TY ++++GLC G++ EA ++ M+H+ P
Sbjct: 431 GLSKGGEVDKAVRVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFP 489
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D SY LI C+ ++E+ L + G + ++V K+ RL A +
Sbjct: 490 DGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVA 549
Query: 404 VELQRFG 410
+L G
Sbjct: 550 NKLIEAG 556
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 227/486 (46%), Gaps = 15/486 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
IKP S + +++ L ++ A+ ML ++ LV D + Q
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ-----------G 233
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG-RIGICP 238
Y++ G + + + + ++ G S VS N +++G K ++ +EM + G P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TFN L + CK G V ++ + +EG+DPD+ TYN++IS CK G + +A
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFL 353
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P+ VTY TL++ LCKE +V EA +L + +G+ PD+ ++N+LI C
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + L EM G PD FT +++ +G+L ALN++ +++ G + S Y
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ N+ A + + + G + YN L++ LCK V DA L D+M+
Sbjct: 474 NTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIM 533
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
KP TY +L+ FC G +A ++ M +G PD LI+G C V
Sbjct: 534 EGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG-FAPNNLTCKYMI 597
A LL K +YN V ++ + L + L AP+ ++ + +
Sbjct: 594 ASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVF 653
Query: 598 HSLWKG 603
L G
Sbjct: 654 RGLCNG 659
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 176/350 (50%), Gaps = 2/350 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G ++E+ + + + P+ V+ N L++ L K N +++ ++ + GI P+
Sbjct: 342 KLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + E++ +G +PD TYN LI S C KG+L++A + + M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++TY TL++G CK K+REA ++F M G+S + V+YNTLI CK ++
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ +M+ G PD FT ++ + + G + A ++V + G Y L
Sbjct: 522 EDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN- 480
I LC+ R A+ LL I G + YN +++ L + +A+ L EM+++N
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 481 IKPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P +YR + C G G EAV + E+LE G +P+ +L G
Sbjct: 642 AAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 223/541 (41%), Gaps = 46/541 (8%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR Q+D +AL FN P + Y I+ L + F K+L ++ C
Sbjct: 57 LRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKN--SGC 114
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKL 218
F LI +Y + L E +D G +P N +LN L+
Sbjct: 115 EMGTSPFLILIE-------SYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDG 167
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N + + +M GI P+ TFN+L C+ + LE + G PD T+
Sbjct: 168 NNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
T++ Y ++G L+ A + M V+ +++G CKEG+V +A M +
Sbjct: 228 TTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 339 R-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ G PD ++NTL+ CK G ++ + ++ M+ G PD +T ++ G K G +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A+ + ++ S + Y+ LI LC++N+ AT L + G +P + +N L+
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKP---------------------------------- 483
+ LC + A+ L +EM + +P
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 484 -SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
S+ TY LI FC + EA + DEM G+ +S LI+G C + V A L
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + Q D +YN++ F GD+ K ++ + G P+ +T +I L K
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 603 G 603
Sbjct: 588 A 588
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G I+++ + G +P IV+ L++GL K ++ ++ + GI
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALT 609
Query: 240 THTFN-ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK-KGRLNDAFYL 297
H +N ++ +F K + +N F E +E+ PD V+Y + C G + +A
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 298 YRIMYRRNVLPDLVTYTTLMNGL 320
+ + +P+ + L GL
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGL 692
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 207/410 (50%), Gaps = 2/410 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E+F+ ++ ++ G QPS + L+ + D+ ++ +EM PN H
Sbjct: 254 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 313
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C+ G +++ NG K+ + G P ++T+N LI+ YCK+G + AF L +M
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ N P++ TY LM GLC+ K +A L R+V GL PD V+YN L+ +CKEG++
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++ M G+ PD FT ++ G K GRL A ++ + + G+S+ + L
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + L E + ++ + + +N +++L K + +A + +M+ +
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 553
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
PS+ T+ LI C G + ++ +++ M ++G P+ ++ING C V +AE
Sbjct: 554 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 613
Query: 542 LLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+L F F + +Y + + G L + ++ ++ G PN+
Sbjct: 614 IL-FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNS 662
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 216/476 (45%), Gaps = 31/476 (6%)
Query: 96 SRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
S VL C+ D + A F + + +P S Y +++H L + A ++ E+VE
Sbjct: 211 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 270
Query: 155 LVKDCPHSVDVFQDLI----------------------SCTEDCNWAYVKV------GLI 186
K C S + LI +C + + + + G I
Sbjct: 271 --KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 328
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ FRK L G P I++ N L+NG K + +Q+ M + PN T+N L
Sbjct: 329 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 388
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C+ K L ++ + G PD VTYN L+ +CK+G+LN AF ++ M +
Sbjct: 389 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 448
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD T+T L++GLCK G++ +A+ + MV +G+S D V++ LI +CK GK ++
Sbjct: 449 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 508
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L M+ N T + GK+ +L A ++ ++ ++G+ S + LI C
Sbjct: 509 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 568
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + +LER+ Q G P++ Y ++ LC V +A + M + P+
Sbjct: 569 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 628
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY L+ GR A ++ M+++G P+S I L++G+ + A AL
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 684
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 205/428 (47%), Gaps = 9/428 (2%)
Query: 188 ESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+F+ F K + + +P+ V+ + L++GL + +++ +Q+ +EM G P+T T+ +L
Sbjct: 224 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 283
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C G DK L+++ + P++ TY LI C++G++ +A ++R M + +
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 343
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
P ++T+ L+NG CKEG V A QL M P+I +YN L+ C+ K ++
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 403
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL ++ NG+ PD T I+V G+ KEG+L A N+ + G+ + LI LC
Sbjct: 404 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 463
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A +L + + G + L++ CK D L + MV+ L+
Sbjct: 464 KLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR---CLT 520
Query: 487 TYRALICCFCGIGRS---GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
T C +G+ EA +++ +M++ G++P +LI G+C + + +L
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +Y + N +G + + + G +PN+ T ++ + K
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640
Query: 604 --MERKFQ 609
++R FQ
Sbjct: 641 GRLDRAFQ 648
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 217/490 (44%), Gaps = 40/490 (8%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCL-------IVH 134
LK L H+ H +++ QS++V + FF WV S+YC ++
Sbjct: 37 LKSLASHMTPHLAGKII-GLQSNNVELGVRFFKWV-------CRQSSYCYDLDGRIQLLG 88
Query: 135 ILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFR 194
+L + F A K +V L+++C ED VK+
Sbjct: 89 VLVSRDLFGVAQK---AVVLLIQEC--------------EDSENGVVKL------MGALD 125
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
++GF+ S + LL L KLN + VY M G + + + CKNG
Sbjct: 126 GMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNG 185
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTY 313
V F K+ GF D +L+ + C++ L +AF ++ M + N P+ VTY
Sbjct: 186 FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTY 245
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+ L++GLC+ G++ EA QL MV +G P +Y LI A C G ++ +L EM
Sbjct: 246 SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMAT 305
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
P+ T I++ +EG++ A + ++ + G+ ++ LI C++ +
Sbjct: 306 KACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVS 365
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A LL + + P++ YNELME LC+ A LL +VD + P TY L+
Sbjct: 366 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 425
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
FC G+ A ++ + M +G+ PD LI+G C + +A +LG KK
Sbjct: 426 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 485
Query: 554 DTESYNAVFN 563
D ++ A+ +
Sbjct: 486 DEVTFTALID 495
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 167/406 (41%), Gaps = 74/406 (18%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI-- 236
+ K G + +F F G +P + L++GL KL ++Q + M + GI
Sbjct: 426 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 485
Query: 237 --------------------------------CPNT-HTFNILTHVFCKNGDVDKVNGFL 263
C T HTFN K+ +++ N L
Sbjct: 486 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 545
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
K+ + G P +VT+ LI +C+ G + + M + P++ TYT ++NGLC
Sbjct: 546 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 605
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V EA + M G+SP+ +Y L+ A+ K G++ + ++ M+ NG P++
Sbjct: 606 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 665
Query: 384 QIIVQGY-----GKEGRLLS--------------------------------ALNLVVEL 406
++ G+ R LS AL + E+
Sbjct: 666 SALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI 725
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
++ GV + D+Y++L+V LC++ R A L + + + G P I + ++E CK
Sbjct: 726 KKCGVP-TEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKY 783
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L ++D PS ++Y +I GR EA L+ +++
Sbjct: 784 DNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 165/382 (43%), Gaps = 37/382 (9%)
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+NG V K+ G L+ + E GF Y+TL+ K AF +YR M + +
Sbjct: 114 ENGVV-KLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 172
Query: 312 TYTTLMNGLCKEGKVR-----------------------------------EAHQLFHRM 336
Y T++N LCK G V+ EA ++F +M
Sbjct: 173 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 232
Query: 337 V-HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
P+ V+Y+ LI C+ G+++E+ L EM+ G P T T ++++ G
Sbjct: 233 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 292
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
A+ ++ E+ + Y LI LC++ + A + ++ + G P + +N
Sbjct: 293 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ CK V A L M N KP++ TY L+ C + +S +A L+ ++++G
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+LPD +L++G+C E +N A + D ++ A+ + + G L +
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472
Query: 576 ELQKRFLRLGFAPNNLTCKYMI 597
+ ++ G + + +T +I
Sbjct: 473 GILGSMVKKGISLDEVTFTALI 494
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G S K + G P++ + ++NGL +++ + M G+ P
Sbjct: 566 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 625
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC------------ 286
N T+ +L K G +D+ + + + G P+ Y+ L+S +
Sbjct: 626 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALS 685
Query: 287 KKGRL---------ND----AFYLYRIM-----------YRRNVLPDLVTYTTLMNGLCK 322
G L ND + +++R+M ++ +P Y L+ GLCK
Sbjct: 686 STGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCK 745
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG++ EA QL MV GL PD + +++I YCK K + ++ N P +
Sbjct: 746 EGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFAS 804
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQR 408
++ G EGR+ A LV +L R
Sbjct: 805 YCWVIHGLRNEGRVQEAQKLVSDLVR 830
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
NFL+ GL K I + Q+ ++M + G+ P+ +I+ H +CK D F++ + +
Sbjct: 737 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLD 795
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F P +Y +I +GR+ +A L + R + + V T + L KE
Sbjct: 796 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 850
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 205/410 (50%), Gaps = 1/410 (0%)
Query: 192 TFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ K +D +G + + ++N LN +D + V ++ ++G P+T TF L
Sbjct: 95 SLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGL 154
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C G + + +K+ EGF P+ VTY TLI CK G A L R M ++N P++
Sbjct: 155 CVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNV 214
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+TY T+++ L K+ +V EA +F M+ +G+SP++ +YN++I CK + + +L+ E
Sbjct: 215 ITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNE 274
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ + I P+ +V KEG + A ++V + + GV Y L+ C +
Sbjct: 275 MVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE 334
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A + + + + G P++ Y+ L+ CK + A+ L +EM R + P++ TY
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C +GR +A++L EM+ SG +PD R+L++ C + +++A A+L
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D +SYN V + G+L +L G P+ T MI+ L
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGL 504
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 193/402 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + + R + +P++++ N +++ L K +++ ++ EM GI PN
Sbjct: 191 KVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVS 250
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + H CK + V + ++ + P++V + TL+ + CK+G + A + +M
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R V PD+VTYT LM+G C ++ EA ++F MV +G +P+++SY+TLI YCK ++
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI 370
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L EM + P+ T ++ G GRL A+ L E+ G Y L
Sbjct: 371 DKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRIL 430
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ A ++L+ I P ++ YN +++ +C+ + A L + + +
Sbjct: 431 LDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGL 490
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + TY +I C G EA L EM G PD ++ G+ + A
Sbjct: 491 HPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQ 550
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LL + D + + M ++DG + ++ F++
Sbjct: 551 LLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 198/429 (46%), Gaps = 5/429 (1%)
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
DV+ I C+ V G F K +G QP + L+ GL I +
Sbjct: 108 DVYTLAIVINSFCHLNRVDFG-----FSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGE 162
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++++M G PN T+ L H CK G+ L + ++ +P+++TYNT+I
Sbjct: 163 ALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIID 222
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
K ++N+A ++ M + + P++ TY ++++GLCK + + L + MV + P
Sbjct: 223 CLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMP 282
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++V + TL+ A CKEG + + ++ M+ G+ PD T ++ G+ + A +
Sbjct: 283 NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVF 342
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ R G + + Y LI C+ R A L E + Q VP++ YN L+ LC
Sbjct: 343 DTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHV 402
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ DA+ L EMV P L TYR L+ C +A++++ + S + PD Q
Sbjct: 403 GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
++I+G C ++ A L + K D +Y + N G L++ +L +
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522
Query: 584 LGFAPNNLT 592
G +P++ T
Sbjct: 523 DGCSPDDCT 531
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 180/384 (46%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N ID+ + M + P+ F + V ++++ G D+ T
Sbjct: 53 NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+I+S+C R++ F + +++ PD T+TTL+ GLC EGK+ EA LF +MV
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G P+ V+Y TLI CK G + + LL M+ P+ T I+ K+ ++
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
ALN+ E+ G+S + Y+ +I LC+ + +L+ + +P++ I+ L++
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+LCK V A + D M+ R ++P + TY AL+ C EA + D M+ G P
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ LINGYC + ++KA L ++ + + +YN + + G L + L
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ G P+ +T + ++ L K
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCK 436
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 175/367 (47%), Gaps = 21/367 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P S Y I+H L +++ ++ E+V+ K P+ V +F L+ A
Sbjct: 245 ISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD-SKIMPNVV-IFTTLVD-------ALC 295
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ + + G +P +V+ L++G + +D+ +V++ M R G PN
Sbjct: 296 KEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVI 355
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+++ L + +CK +DK E++ + P++VTYNTLI C GRL DA L+ M
Sbjct: 356 SYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEM 415
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+PDLVTY L++ LCK + +A + + L+PDI SYN +I C+ G++
Sbjct: 416 VASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGEL 475
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L + G++PD +T I++ G +G L A L E+ G S Y+ +
Sbjct: 476 EAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLI 535
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
++N +A LL+ + G+ ++E +L D+ +D+++
Sbjct: 536 TRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE------------MLSDDGLDQSV 583
Query: 482 KPSLSTY 488
K L +
Sbjct: 584 KQILHEF 590
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P +T+ LI C G+ GEA+ L D+M+ G P+ LI+G C + A
Sbjct: 141 QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIR 200
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL +K + +YN + + +D +++ + + + G +PN T +IH L
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260
Query: 602 KGMERK 607
K E K
Sbjct: 261 KFSEWK 266
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 232/511 (45%), Gaps = 71/511 (13%)
Query: 85 PLLP-HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
PLLP H+ A +++CQ D + AL FN ++ ++ K T S Y ++ L + KF
Sbjct: 4 PLLPKHVTA------VIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFE 57
Query: 144 FAMKMLCELVELVKD-------------------CPHSVDVFQ--DLISCTEDCNWAY-- 180
++L ++ E V + +V+VF+ D C E ++Y
Sbjct: 58 AMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDC-EPTVFSYNA 116
Query: 181 -----VKVGLIRESFKTFRKTLDVGFQPSIVSCNF----------------LLNGL---- 215
V G ++ K + + D G P + S LLN +
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 216 LKLNCIDQCWQV------------YEEMGRI---GICPNTHTFNILTHVFCKNGDVDKVN 260
++N + C V YE G++ G+ TFN L V CK GDV +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L+K+ + G P+L TYN I C++G L+ A + + + PD++TY L+ GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK K +EA +MV+ GL PD +YNTLI YCK G +Q ++ ++ + + NG PD
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT + ++ G EG AL L E G+ + +Y+ LI L A L
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G +P ++ +N L+ LCK V+DA L M+ + P + T+ LI + +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
A+ ++D ML++G+ PD L+NG C
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 200/422 (47%), Gaps = 1/422 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E K K + G P++ + N + GL + +D ++ + G P+
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CKN + +L K+ EG +PD TYNTLI+ YCK G + A +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+PD TY +L++GLC EG+ A LF+ + +G+ P+++ YNTLI +G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L EM G+ P+ T I+V G K G + A LV + G ++ L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + A +L+ + +G P + YN L+ LCK D + MV++
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+L T+ L+ C + EA+ L++EM + PD+ LI+G+C D++ A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 542 LLGFFAKKFQIYD-TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + +++ T +YN + + F E +++ +L + + P+ T + M+
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 601 WK 602
K
Sbjct: 648 CK 649
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 20/364 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F + L G +P+++ N L+ GL I + Q+ EM G+ P TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL + CK G V +G ++ + +G+ PD+ T+N LI Y + ++ +A + +M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V PD+ TY +L+NGLCK K + + + MV +G +P++ ++N L+ + C+ K+ E
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDIYDYLI 422
+ LL EM + PD T ++ G+ K G L A L +++ + VS S Y+ +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 423 VALCQDNRPFAATSLLER-----IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
A + A L + +G DGY Y +++ CK +V EM+
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYT-----YRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ PSL+T +I C C R EA ++ M++ G++P++ +N C DV+
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTIC---DVD 715
Query: 538 KAEA 541
K E
Sbjct: 716 KKEV 719
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 202/405 (49%), Gaps = 1/405 (0%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
++ G +P +++ N L+ GL K + + +M G+ P+++T+N L +CK G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ GF PD TY +LI C +G N A L+ + + P+++ Y TL
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ GL +G + EA QL + M +GL P++ ++N L+ CK G + ++ L+ M+ G
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+PD FT I++ GY + ++ +AL ++ + GV Y+ L+ LC+ ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+ + + G P+L +N L+ESLC+ + +AL L +EM ++++ P T+ LI FC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQ-ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
G A +L +M E+ + S ++I+ + + +V AE L + D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+Y + + F + G+++ + + GF P+ T +I+ L
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 192/462 (41%), Gaps = 45/462 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y L + L + A++M+ L+E + V + +LI + K
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIE--QGPKPDVITYNNLI-------YGLCKN 299
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+E+ K ++ G +P + N L+ G K + ++ + G P+ T+
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C G+ ++ + +G P+++ YNTLI +G + +A L M
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++P++ T+ L+NGLCK G V +A L M+ +G PDI ++N LI Y + KM+
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M+ NG+ PD +T ++ G K + + + G + + ++ L+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD------------------- 464
+LC+ + A LLE + P + L++ CK
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 465 -----------------SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+V A L EMVDR + P TYR ++ FC G
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKF 659
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+ EM+E+G +P +IN C+E V +A ++ +K
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 140/375 (37%), Gaps = 81/375 (21%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV--TYTTLMNGLCKEG 324
+E GF L TY ++I G+ +A + R NV ++ Y M ++G
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKF-EAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKG 90
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
KV+EA +F RM P + SYN ++ G ++ + M GI PD ++
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL------ 438
I ++ + C+ +RP AA LL
Sbjct: 151 IRMKSF-----------------------------------CKTSRPHAALRLLNNMSSQ 175
Query: 439 ------------------ERIGQDGY-----------VPSLEIYNELMESLCKCDSVADA 469
E +GY L +N+L+ LCK V +
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L D+++ R + P+L TY I C G AV ++ ++E G PD LI G
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR----LG 585
C +AE LG + D+ +YN + + + G +++L +R + G
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG----MVQLAERIVGDAVFNG 351
Query: 586 FAPNNLTCKYMIHSL 600
F P+ T + +I L
Sbjct: 352 FVPDQFTYRSLIDGL 366
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 187/385 (48%), Gaps = 35/385 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + GL+ E+F+ D G +PS+ + N ++NGL K + + EM IG+ P
Sbjct: 10 AYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSP 69
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+N L C+ + + ++ +G PDLV++++L++ + + L+ A +
Sbjct: 70 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYF 129
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + ++PD V YT LM+G C+ G + EA ++ M+ +G D+++YNT++ CKE
Sbjct: 130 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 189
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ ++ L EM+ G PD +T ++ G+ ++G + AL+L FG R+I
Sbjct: 190 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSL------FGTMTQRNIK 243
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
P + YN L++ CK + A L D M+
Sbjct: 244 -----------------------------PDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I P+ TY LI +C +G EA L D M+E G+ P C +I GYC D +K
Sbjct: 275 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 334
Query: 539 AEALLGFFAKKFQIYDTESYNAVFN 563
A+ LG K D SYN + N
Sbjct: 335 ADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 172/357 (48%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L +C+ G +++ + + ++G P L TYN +I+ CKKGR A + M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD TY TL+ C+ EA ++F M+ +G+ PD+VS+++L+ + + +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ +M G+ PD +++ GY + G +L AL + E+ G + Y+ +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++ A L + + + G +P + L+ C+ ++ AL L M RNI
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP + Y LI FC +G +A L D M+ + P+ +LIN YC V++A
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
L +K + N V + GD SK E R + G AP++++ +I+
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 143/290 (49%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+VTY TL+ C+EG + EA ++ + M +GL P + +YN +I CK+G+ +K +L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM+ G+ PDT T ++ + A + E+ R GV + L+ ++
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A + + G VP IY LM C+ ++ +AL ++DEM+++ + Y
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
++ C +A L DEM+E G LPD LI+G+C + ++ KA +L G ++
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
D +YN + + F + G++ K EL + PN++T +I++
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 290
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 191/363 (52%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K R D +P +V N +++GL K +++ + Y EM GI P+
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L FC G + L ++ + +PD+ TY LI + CK+G+L +A L +M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P++VTY+TLM+G C G+V A Q+FH MV ++P + SYN +I CK +
Sbjct: 369 TKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSV 428
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +LL EM+ + P+T T ++ G K GR+ SAL+L+ EL G Y L
Sbjct: 429 DEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSL 488
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++ A +L ++ + G P+ Y L++ LCK + +A L ++ +
Sbjct: 489 LDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGC 548
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAE 540
+ TY +I C G EA+++ +M ++G +PD+ ++I EKD N KAE
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL-FEKDENDKAE 607
Query: 541 ALL 543
LL
Sbjct: 608 KLL 610
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 206/412 (50%), Gaps = 1/412 (0%)
Query: 192 TFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ K ++V G +P +V+ + L+N L + + V ++ ++G PNT L
Sbjct: 153 SLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGL 212
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C G+V K F +K+ +GF + V+Y TL++ CK G A L R++ R+ PD+
Sbjct: 213 CLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDV 272
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
V Y T+++GLCK+ V EA+ + M RG+ PD+++Y+TLI +C G++ + SLL E
Sbjct: 273 VMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE 332
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M I PD +T I++ KEG+L A NL+ + + GV + Y L+ C
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A + + Q PS+ YN ++ LCK SV +A+ L EM+ +N+ P+ TY +
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C GR A+ LM E+ G D L++G C ++++KA AL ++
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +Y A+ + + L +L + L G + T MI L K
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCK 564
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 207/423 (48%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G + SF K L +G+QP+ + L+ GL + + ++++ G N
Sbjct: 177 FCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMN 236
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G+ L IE+ PD+V YNT+I CK +N+A+ Y
Sbjct: 237 QVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYT 296
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + PD++TY+TL+ G C G++ A L + M + ++PD+ +Y LI A CKEG
Sbjct: 297 EMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEG 356
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+K+LL M G+ P+ T ++ GY G + +A + + + V+ S Y+
Sbjct: 357 KLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYN 416
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ A +LL + VP+ YN L++ LCK + AL L E+ R
Sbjct: 417 IMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHR 476
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +L+ C +A++L +M E G+ P+ LI+G C + A
Sbjct: 477 GQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNA 536
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L K D +YN + ++G L + + ++ + G P+ +T + +I S
Sbjct: 537 QKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596
Query: 600 LWK 602
L++
Sbjct: 597 LFE 599
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 208/425 (48%), Gaps = 4/425 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ ++ F L + PSI+ +L L+K+ + ++M GI P+ T +
Sbjct: 112 VVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLS 171
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
IL + FC G + L KI + G+ P+ + TL+ C KG + + + + + +
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ V+Y TL+NGLCK G+ R A +L + R PD+V YNT+I CK+ + E+
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LI 422
EM GI+PD T ++ G+ G+L+ A +L+ E+ +I+ D+Y Y LI
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL--KNINPDVYTYTILI 349
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
ALC++ + A +LL + ++G P++ Y+ LM+ C V +A + MV +
Sbjct: 350 DALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVN 409
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
PS+ +Y +I C EA++L+ EML ++P++ LI+G C + A L
Sbjct: 410 PSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + Q D +Y ++ + ++ +L K + L + G PN T +I L K
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529
Query: 603 GMERK 607
G K
Sbjct: 530 GARLK 534
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 198/406 (48%), Gaps = 6/406 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN---CIDQCWQVYEEMGRIGICPNT 240
G +++S K + GFQ + VS LLNGL K+ C + ++ E+ P+
Sbjct: 216 GEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTR---PDV 272
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N + CK+ V++ F ++ G PD++TY+TLI +C G+L AF L
Sbjct: 273 VMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE 332
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +N+ PD+ TYT L++ LCKEGK++EA L M G+ P++V+Y+TL+ YC G+
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ +K + + M+ + P + I++ G K + A+NL+ E+ V + Y+
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ R +A L++ + G + Y L++ LCK ++ A+ L +M +R
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I+P+ TY ALI C R A L +L G D V+I G C E +++A
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
A+ I D ++ + E + K +L + G
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 112/210 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y VG + + + F + PS+ S N ++NGL K +D+ + EM + P
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N L CK+G + ++++ G D++TY +L+ CK L+ A L+
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P+ TYT L++GLCK +++ A +LF ++ +G D+ +YN +I CKE
Sbjct: 506 MKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
G + E+ ++ +M NG PD T +II++
Sbjct: 566 GMLDEALAMKSKMEDNGCIPDAVTFEIIIR 595
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 136/267 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G ++E+ G +P++V+ + L++G + + Q++ M + + P
Sbjct: 351 ALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNP 410
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++NI+ + CK VD+ L ++ + P+ VTYN+LI CK GR+ A L
Sbjct: 411 SVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLM 470
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++ R D++TYT+L++GLCK + +A LF +M RG+ P+ +Y LI CK
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ ++ L ++ G D +T +++ G KEG L AL + +++ G +
Sbjct: 531 ARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTF 590
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDG 445
+ +I +L + + A LL + G
Sbjct: 591 EIIIRSLFEKDENDKAEKLLHEMIAKG 617
>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 150/570 (26%), Positives = 266/570 (46%), Gaps = 61/570 (10%)
Query: 86 LLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFA 145
+LP++ + RV+ + Q+ AL F +WV + + + C+++H+L + ++ A
Sbjct: 1 MLPNMTCSLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDA 60
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV----------KVGLIRESFKTFRK 195
+ ++ L+ + P ++V LIS + C + ++G +++ K
Sbjct: 61 LFIMGNLMNVNGISP--LEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITK 118
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM----------------------GR 233
GF ++ + N L+ LLKLN +++ W++Y+EM GR
Sbjct: 119 LQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGR 178
Query: 234 I-------------GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG---FDPDLVT 277
+ GI PN TFN++ K G +D + K+E PD VT
Sbjct: 179 LVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVT 238
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN+ ++ +CK G L A + M + + P++ TY TL++G + G + A +L +V
Sbjct: 239 YNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELV 298
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V YN++I EG M+ + LL +M+ IYPD FT I+++G + G L
Sbjct: 299 EKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLN 358
Query: 398 SA---LNLVVELQRFGVSISRDIYDYLIVA--LCQDNRPFAATSLLERIGQDGYVPSLEI 452
A L +++E+ S+ RD + + +V LC+ N A LL + G VP +
Sbjct: 359 EAFKFLQMILEM-----SLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVT 413
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L++ CK V +A+ + ++M+ KP+L Y ++I F G A+ L+D +
Sbjct: 414 FGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLR 473
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ D LI+GYC +++A AL + +YN + N + G +
Sbjct: 474 RMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVL 532
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ EL K + G P+ +T +I S K
Sbjct: 533 QAKELMKMMVLRGLIPDYVTYTILITSFSK 562
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 179/360 (49%), Gaps = 5/360 (1%)
Query: 179 AYVKVG--LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ K+G + E FK ++ L +P++ + L++G ++ ++ +++ +E+ G+
Sbjct: 245 GFCKIGNLAVAEEFK--KEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGL 302
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN+ +N + H GD++ + L + ++ PD TY+ +I C+ G LN+AF
Sbjct: 303 LPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFK 362
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+++ +++ D ++ ++N LC+ + A QL M RGL PD+V++ TLI +C
Sbjct: 363 FLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHC 422
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K+GK++ + + +M+ G P+ ++ G+ KEG A+ L+ L+R G+
Sbjct: 423 KDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGL-FDVV 481
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + A +L + G + S YN L+ SLCK V A L M
Sbjct: 482 TYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM 541
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V R + P TY LI F E + L D M+ G++PD Q + ++ E+ V
Sbjct: 542 VLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESV 601
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 149/309 (48%), Gaps = 18/309 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y I+H L+ A +L +++ D D F I C +
Sbjct: 304 PNSVIYNSIIHWLSMEGDMEGASLLLSDMI----DKRIYPDQFTYSIVIEGLC-----RN 354
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+FK + L++ S N ++N L + N + Q+ M G+ P+ TF
Sbjct: 355 GYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTF 414
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L CK+G V+ EK+ + G P+L+ YN++I+ + K+G + A L + R
Sbjct: 415 GTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTL-R 473
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R L D+VTY TL++G C GK+ +A LF M + G+ V+YNTLI + CK G + +
Sbjct: 474 RMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQ 533
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF----GVSISRDIYD 419
+K L+ M+ G+ PD T I++ + K+ + V+EL + GV R Y
Sbjct: 534 AKELMKMMVLRGLIPDYVTYTILITSFSKK----CSPEEVIELHDYMVLKGVVPDRQTYQ 589
Query: 420 YLIVALCQD 428
+++ L Q+
Sbjct: 590 TMVIPLLQE 598
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 1/181 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + + + K + G +P+++ N ++NG K D + + + R+G+ +
Sbjct: 423 KDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF-DVV 481
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L H +C G +D+ ++ G VTYNTLI+S CK G + A L ++M
Sbjct: 482 TYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMM 541
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++PD VTYT L+ K+ E +L MV +G+ PD +Y T++ +E +
Sbjct: 542 VLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESV 601
Query: 362 Q 362
+
Sbjct: 602 E 602
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 214/458 (46%), Gaps = 42/458 (9%)
Query: 177 NWAYVKV--GLIRESFKTFRKTL-----DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
N+ Y + G R+ T K++ +G +P V+ L+NG +K + I +QV E
Sbjct: 302 NYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKE 361
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY---- 285
EM I NT T+ L H CK GD++K ++ G PD+ TYN LI Y
Sbjct: 362 EMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQ 421
Query: 286 -------------------------------CKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
C G L A L++ M + P++V YT
Sbjct: 422 NMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYT 481
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T++ GL KEG+ EA ++ M +GLSPD+ YNT+I +CK GKM+E KS L EM+
Sbjct: 482 TIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK 541
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ P+ +T + GY + G + +A +E+ G++ + I LI C+D A
Sbjct: 542 GLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKA 601
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + G +P ++ ++ L+ L K + +A+ + E++D+ + P + TY +LI
Sbjct: 602 FAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISN 661
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G A L D+M + G+ P+ LING C ++ KA L +K +
Sbjct: 662 LCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARN 721
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ +Y+ + + + +L++ +L +G P++
Sbjct: 722 SVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 196/365 (53%), Gaps = 1/365 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G ++ + ++F + LD G P+ V C L++G K + + + M G+ P
Sbjct: 556 GYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLP 615
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T ++L H KNG + + G ++ ++G PD+ TY +LIS+ CK+G L AF L+
Sbjct: 616 DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELH 675
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P++VTY L+NGLCK G++ +A +LF + +GL+ + V+Y+T+I YCK
Sbjct: 676 DDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKS 735
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ L + M G+ PD+F ++ G K G AL+L + + G++ S +
Sbjct: 736 ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAF 794
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI + + A L+E + + P+ Y L+E C ++ +A L EM
Sbjct: 795 NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQK 854
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ P++ TY +L+ + IGR E SL DEM+ G+ PD V+++ + E + K
Sbjct: 855 RNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIK 914
Query: 539 AEALL 543
A L+
Sbjct: 915 ALKLV 919
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 251/577 (43%), Gaps = 91/577 (15%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
FFNWV + S + ++ IL + F A +L +++ PH V + +I
Sbjct: 93 FFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRN--PH-VKILDSIIK 149
Query: 172 CTEDCNWA---------------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
C ++ N + Y K G + E+ F F + CN L LL
Sbjct: 150 CYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLL 209
Query: 217 KLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K N ++ W+VY+ G +G I P+ +T+ L + +C+ G V++ L +EE+G P+L
Sbjct: 210 KGNRVELFWKVYK--GMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNL 267
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTY+ +I+ C+ G +++A L R M + +LPD Y TL++G C++ + E +
Sbjct: 268 VTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDE 327
Query: 336 MVHRGLSPDIVSYNTLI----------------------------FAY-------CKEGK 360
M GL PD V+Y LI F Y CK G
Sbjct: 328 MYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGD 387
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR------------ 408
+++++ L EM GI PD T +++GY K + A L++E+++
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447
Query: 409 -----------------------FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+G+ + IY ++ L ++ R A +L + G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P + YN ++ CK + + EM+ + +KP++ TY A I +C G A
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
EML+SG+ P+ IC LI+GYC + + KA A + + D ++++ + +
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++G L + M + L G P+ T +I +L K
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK 664
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 202/459 (44%), Gaps = 35/459 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY +VG + E + G P++V+ + ++ GL + +D+ ++ M G+ P
Sbjct: 241 AYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLP 300
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + + L FC+ + L+++ G PD V Y LI+ + K+ + AF +
Sbjct: 301 DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVK 360
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R + + TY L++GLCK G + +A LF M G+ PDI +YN LI Y K
Sbjct: 361 EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKV 420
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+++ LL E+ + + + C IV G G L A L E+ +G+ + IY
Sbjct: 421 QNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIY 480
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ L ++ R A +L + G P + YN ++ CK + + EM+
Sbjct: 481 TTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIA 540
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEA----VSLMDE------------------------ 510
+ +KP++ TY A I +C G A + ++D
Sbjct: 541 KGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTK 600
Query: 511 -------MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
ML+ G+LPD Q VLI+G + +A + K + D +Y ++ +
Sbjct: 601 AFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLIS 660
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++GDL EL + G PN +T +I+ L K
Sbjct: 661 NLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 202/421 (47%), Gaps = 3/421 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KV + ++++ + + C ++NGL + + ++++EM G+ P
Sbjct: 416 GYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKP 475
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + + K G ++ L ++++G PD+ YNT+I +CK G++ +
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P++ TY ++G C+ G+++ A + F M+ G++P+ V LI YCK+
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKD 595
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ G+ PD T +++ G K G+L A+ + EL G+ Y
Sbjct: 596 GNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTY 655
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ AA L + + + G P++ YN L+ LCK +A A L D + +
Sbjct: 656 TSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPE 715
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + + TY +I +C EA L M G+ PDS + LI+G C + K
Sbjct: 716 KGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEK 775
Query: 539 AEAL-LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A +L LG + I T ++NA+ + F + G L + +L + + PN++T +I
Sbjct: 776 ALSLFLGMVEE--GIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILI 833
Query: 598 H 598
Sbjct: 834 E 834
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 179/367 (48%), Gaps = 34/367 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E+ F + LD G P + + L++ L K + ++++++M + GI PN
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK G++ K + I E+G + VTY+T+I+ YCK L +AF L+ M
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 302 YRRNVLPDLVTYTTLMNGLCKEG----------------------------------KVR 327
V PD Y L++G CK G K+
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLI 808
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA+QL MV ++P+ V+Y LI +C G ++E++ L EM + P+ T ++
Sbjct: 809 EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLL 868
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + GR +L E+ G+ + ++ A ++ A L++ + +G
Sbjct: 869 HGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVN 928
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+Y L+++LCK +++++ L + DE+ + K SL+T L+CCF GR+ EA+ +
Sbjct: 929 VCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRV 988
Query: 508 MDEMLES 514
++ M+ S
Sbjct: 989 LESMVRS 995
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 207/410 (50%), Gaps = 2/410 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E+F+ ++ ++ G QPS + L+ + D+ ++ +EM PN H
Sbjct: 211 EAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVH 270
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C+ G +++ NG K+ + G P ++T+N LI+ YCK+G + AF L +M
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ N P++ TY LM GLC+ K +A L R+V GL PD V+YN L+ +CKEG++
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 390
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++ M G+ PD FT ++ G K GRL A ++ + + G+S+ + L
Sbjct: 391 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + L E + ++ + + +N +++L K + +A + +M+ +
Sbjct: 451 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 510
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
PS+ T+ LI C G + ++ +++ M ++G P+ ++ING C V +AE
Sbjct: 511 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 570
Query: 542 LLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+L F F + +Y + + G L + ++ ++ G PN+
Sbjct: 571 IL-FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNS 619
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 216/476 (45%), Gaps = 31/476 (6%)
Query: 96 SRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
S VL C+ D + A F + + +P S Y +++H L + A ++ E+VE
Sbjct: 168 SLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 227
Query: 155 LVKDCPHSVDVFQDLI----------------------SCTEDCNWAYVKV------GLI 186
K C S + LI +C + + + + G I
Sbjct: 228 --KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKI 285
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ FRK L G P I++ N L+NG K + +Q+ M + PN T+N L
Sbjct: 286 EEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C+ K L ++ + G PD VTYN L+ +CK+G+LN AF ++ M +
Sbjct: 346 MEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGL 405
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD T+T L++GLCK G++ +A+ + MV +G+S D V++ LI +CK GK ++
Sbjct: 406 EPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCF 465
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L M+ N T + GK+ +L A ++ ++ ++G+ S + LI C
Sbjct: 466 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 525
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + +LER+ Q G P++ Y ++ LC V +A + M + P+
Sbjct: 526 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 585
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY L+ GR A ++ M+++G P+S I L++G+ + A AL
Sbjct: 586 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARAL 641
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 205/428 (47%), Gaps = 9/428 (2%)
Query: 188 ESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+F+ F K + + +P+ V+ + L++GL + +++ +Q+ +EM G P+T T+ +L
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C G DK L+++ + P++ TY LI C++G++ +A ++R M + +
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 300
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
P ++T+ L+NG CKEG V A QL M P+I +YN L+ C+ K ++
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 360
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL ++ NG+ PD T I+V G+ KEG+L A N+ + G+ + LI LC
Sbjct: 361 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 420
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A +L + + G + L++ CK D L + MV+ L+
Sbjct: 421 KLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR---CLT 477
Query: 487 TYRALICCFCGIGRS---GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
T C +G+ EA +++ +M++ G++P +LI G+C + + +L
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +Y + N +G + + + G +PN+ T ++ + K
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 597
Query: 604 --MERKFQ 609
++R FQ
Sbjct: 598 GRLDRAFQ 605
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 214/487 (43%), Gaps = 44/487 (9%)
Query: 86 LLPHLGAHEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCL-------IVHILA 137
+ PHL ++ QS++V + FF WV S+YC ++ +L
Sbjct: 1 MTPHLAGK-----IIGLQSNNVELGVRFFKWV-------CRQSSYCYDLDGRIQLLGVLV 48
Query: 138 WNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL 197
+ F A K +V L+++C ED VK+
Sbjct: 49 SRDLFGVAQK---AVVLLIQEC--------------EDSENGVVKL------MGALDGMT 85
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
++GF+ S + LL L KLN + VY M G + + + CKNG V
Sbjct: 86 ELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQ 145
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTL 316
F K+ GF D +L+ + C++ L +AF ++ M + + P+ VTY+ L
Sbjct: 146 AAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSIL 205
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GLC+ G++ EA QL MV +G P +Y LI A C G ++ +L EM
Sbjct: 206 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 265
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ T I++ +EG++ A + ++ + G+ ++ LI C++ +A
Sbjct: 266 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 325
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL + + P++ YNELME LC+ A LL +VD + P TY L+ FC
Sbjct: 326 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 385
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ A ++ + M +G+ PD LI+G C + +A +LG KK D
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445
Query: 557 SYNAVFN 563
++ A+ +
Sbjct: 446 TFTALID 452
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 167/406 (41%), Gaps = 74/406 (18%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI-- 236
+ K G + +F F G +P + L++GL KL ++Q + M + GI
Sbjct: 383 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 442
Query: 237 --------------------------------CPNT-HTFNILTHVFCKNGDVDKVNGFL 263
C T HTFN K+ +++ N L
Sbjct: 443 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAML 502
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
K+ + G P +VT+ LI +C+ G + + M + P++ TYT ++NGLC
Sbjct: 503 GKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 562
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V EA + M G+SP+ +Y L+ A+ K G++ + ++ M+ NG P++
Sbjct: 563 GRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIY 622
Query: 384 QIIVQGY-----GKEGRLLS--------------------------------ALNLVVEL 406
++ G+ R LS AL + E+
Sbjct: 623 SALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEI 682
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
++ GV + D+Y++L+V LC++ R A L + + + G P I + ++E CK
Sbjct: 683 KKCGVP-TEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKY 740
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L ++D PS ++Y +I GR EA L+ +++
Sbjct: 741 DNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 165/382 (43%), Gaps = 37/382 (9%)
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+NG V K+ G L+ + E GF Y+TL+ K AF +YR M + +
Sbjct: 71 ENGVV-KLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 129
Query: 312 TYTTLMNGLCKEGKVR-----------------------------------EAHQLFHRM 336
Y T++N LCK G V+ EA ++F +M
Sbjct: 130 DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM 189
Query: 337 V-HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
P+ V+Y+ LI C+ G+++E+ L EM+ G P T T ++++ G
Sbjct: 190 SKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 249
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
A+ ++ E+ + Y LI LC++ + A + ++ + G P + +N
Sbjct: 250 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ CK V A L M N KP++ TY L+ C + +S +A L+ ++++G
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+LPD +L++G+C E +N A + D ++ A+ + + G L +
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429
Query: 576 ELQKRFLRLGFAPNNLTCKYMI 597
+ ++ G + + +T +I
Sbjct: 430 GILGSMVKKGISLDEVTFTALI 451
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 37/266 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G S K + G P++ + ++NGL +++ + M G+ P
Sbjct: 523 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 582
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC------------ 286
N T+ +L K G +D+ + + + G P+ Y+ L+S +
Sbjct: 583 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALS 642
Query: 287 KKGRL---------ND----AFYLYRIM-----------YRRNVLPDLVTYTTLMNGLCK 322
G L ND + +++R+M ++ +P Y L+ GLCK
Sbjct: 643 STGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCK 702
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG++ EA QL MV GL PD + +++I YCK K + ++ N P +
Sbjct: 703 EGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFAS 761
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQR 408
++ G EGR+ A LV +L R
Sbjct: 762 YCWVIHGLRNEGRVQEAQKLVSDLVR 787
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
NFL+ GL K I + Q+ ++M + G+ P+ +I+ H +CK D F++ + +
Sbjct: 694 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYDNCLEFMKLVLD 752
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F P +Y +I +GR+ +A L + R + + V T + L KE
Sbjct: 753 NKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKE 807
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 212/432 (49%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L ++ + K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLC-THQMLWEAKSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + F +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W Y+E+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V + TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+L+ E+ G+ + Y LI C++ A +++ Q+ Y L+
Sbjct: 300 QVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM++ +KP TY +I FC G + L+ EM G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 160/380 (42%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 45 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFW 104
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 105 VPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M+ +G+ PD +T +++ G K
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + I+ LI C++ R A + +++ +P L
Sbjct: 225 ESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 284
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + L DEM + +KP TY LI C G A +M+
Sbjct: 285 YNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMI 344
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L D +Y + N F + GD+
Sbjct: 345 QENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVW 404
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G P+ +T
Sbjct: 405 KGSKLLKEMQRDGHVPSVVT 424
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 143/560 (25%), Positives = 263/560 (46%), Gaps = 18/560 (3%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ +N + V L+C + +G + ND + L H + +VL+ D+ AL F
Sbjct: 32 PDEENDCRFVSLLCD-IVRGKQSWKVAFND-ASISSTLRPHHVEQVLMNTLDDAKLALRF 89
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
FN++ + ++++Y ++VH L + F A +L L L+++ H VF +
Sbjct: 90 FNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTL--LLRE-SHPKCVFSHFLDS 146
Query: 173 TEDCNWA-----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ C ++ YV I ++ + P + + + LLNGLLK+
Sbjct: 147 YKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKF 206
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
W++++E G+ P+ +T + + C+ D + + +E GFD +VTYN L
Sbjct: 207 ITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVL 266
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I CK R+++A + R + + + D+VTY TL+ G C+ + QL MV G
Sbjct: 267 IHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGF 326
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
SP + + L+ K+GK+ ++ L+ ++ G P+ F ++ K G L A
Sbjct: 327 SPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAEL 386
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L + + + Y LI + C+ R A S +R+ QDG ++ YN L+ C
Sbjct: 387 LYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQC 446
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K ++ A L EM ++ ++P+ +T+ +LI +C + +A L ++M+++G+ P+
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKR 580
LI+G C + +A L ++ +I TE +YN + + DG + K EL +
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVER-KIKPTEVTYNVLIEGYCRDGKIDKAFELLED 565
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G P+ T + +I L
Sbjct: 566 MHQKGLVPDTYTYRPLISGL 585
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 201/409 (49%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+++GF P+ + + L++GL K ID +++ ++GR G PN +N L + CK GD+
Sbjct: 322 VELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL 381
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
DK + P+ +TY+ LI S+C+ GRL+ A + M + + + Y +L
Sbjct: 382 DKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL 441
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+NG CK G + A LF M ++G+ P ++ +LI YCK+ ++Q++ L +M+ NGI
Sbjct: 442 INGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGI 501
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ +T ++ G ++ A L EL + + Y+ LI C+D + A
Sbjct: 502 TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LLE + Q G VP Y L+ LC V+ A D++ +N+K + Y AL+ +C
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYC 621
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
GR EA+S EM++ G+ D VLI+G + D LL + D
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
Y ++ + ++++G K E + PN +T +++ L K E
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 233/504 (46%), Gaps = 15/504 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKD 158
C+ D VS VK L K +++ YC +V +F ++++ E+VEL
Sbjct: 271 CKGDRVSEAV---EVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELG-- 325
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
F + K G I ++++ K GF P++ N L+N L K
Sbjct: 326 -------FSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKG 378
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+D+ +Y M + + PN T++IL FC++G +D + +++ ++G + Y
Sbjct: 379 GDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY 438
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N+LI+ CK G L+ A L+ M + V P T+T+L++G CK+ +V++A +L+++M+
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G++P++ ++ LI C KM E+ L E++ I P T ++++GY ++G++
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L+ ++ + G+ Y LI LC R A ++ + + + Y+ L+
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C+ + +AL EM+ R I L + LI L+ +M + G+ P
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D+ I +I+ Y E KA + + +Y A+ N + G++ + L
Sbjct: 679 DNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLF 738
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
KR PN++T + +L K
Sbjct: 739 KRMQAANVPPNSITYGCFLDNLTK 762
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 252/546 (46%), Gaps = 19/546 (3%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ F+P N +++ +C + L L L P+ + I + C+S +
Sbjct: 359 FGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSI-LIDSFCRSGRLD 417
Query: 109 -ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A+++F+ + D I T Y +++ S A + E+ K + F
Sbjct: 418 VAISYFDRMIQD-GIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN--KGVEPTATTFT 474
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LIS Y K ++++FK + K +D G P++ + L++GL N + + ++
Sbjct: 475 SLIS-------GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++E+ I P T+N+L +C++G +DK LE + ++G PD TY LIS C
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCS 587
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR++ A ++++NV + + Y+ L++G C+EG++ EA M+ RG++ D+V
Sbjct: 588 TGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVC 647
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL---NLVV 404
+ LI K+ + LL +M G+ PD ++ Y KEG A +L+V
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ F ++ Y L+ LC+ A L +R+ P+ Y +++L K
Sbjct: 708 TEECFPNVVT---YTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEG 764
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ +A+ L M+ + + + T+ +I FC +GR EA ++ EM E+G+ PD
Sbjct: 765 NMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYS 823
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LI YC +V + L + D +YN + +G+L K EL+ LR
Sbjct: 824 TLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRR 883
Query: 585 GFAPNN 590
G P+N
Sbjct: 884 GIIPDN 889
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 177/371 (47%), Gaps = 36/371 (9%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + F + ++ +P+ V+ N L+ G + ID+ +++ E+M + G+ P+T+T+
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA----------- 294
L C G V K F++ + ++ + + Y+ L+ YC++GRL +A
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640
Query: 295 ------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F L + M+ + + PD V YT++++ KEG ++A
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ + MV P++V+Y L+ CK G+M + L M + P++ T +
Sbjct: 701 ECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNL 760
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
KEG + A+ L + + G+ + ++ +I C+ R AT +L + ++G P
Sbjct: 761 TKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDC 819
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ C+ +V ++ L D M++R ++P L Y LI C G +A L D+
Sbjct: 820 VTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDD 879
Query: 511 MLESGMLPDSQ 521
ML G++PD++
Sbjct: 880 MLRRGIIPDNK 890
>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
Length = 567
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 250/506 (49%), Gaps = 36/506 (7%)
Query: 88 PHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNY-------CLIVHILAWNN 140
PHL ++ + V+ Q + AL FFNW N + P +NY I+ +L ++
Sbjct: 56 PHLDSNLVIEVIKEQQPNPYQALFFFNWASN---LNPNPNNYSHNHRCYVAIIDLLLSHS 112
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
F A +L F DL+ AY G + + F K ++
Sbjct: 113 LFPIAKNLL-----------EKHGTFSDLL--VSKLIRAYGYSGDTKSAIFWFHKVKEIQ 159
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PNTHTFNILTHVFCKNGDVDKV 259
+ S N +L L+K+N I+ ++++ + P+ T+ + FCK G +D
Sbjct: 160 QGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVGMIDNA 219
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRIMYRRNVLPDLVTYTTLMN 318
+++ E P+L+T NTLI+ YCKKG + +A +L R+M ++ LPD VTY+TL++
Sbjct: 220 RKVFDEMICE---PNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLID 276
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK+G++ EA + M+ RG +P++ +YN +I+ C G + E++ LL +M NG+
Sbjct: 277 GYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKE 336
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T I++G G+ A+ E+ R G+ + ++ +I A C+ +P A SLL
Sbjct: 337 NVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLL 396
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC-G 497
+ + G S+ +N ++ L + + A+LL ++ + P+L +Y +IC C
Sbjct: 397 KEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRS 456
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF--AKKFQIYDT 555
GR E L+D+ML+ G D+ + L+ G+C + N+ A+ F+ K + +
Sbjct: 457 HGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFC--EAGNEEMAMRAFYDSINKNYVINL 514
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRF 581
+S++ N+ G K++E ++ F
Sbjct: 515 QSFSFFVNLMCGKG---KVIEAEQIF 537
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 40/363 (11%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRR 304
L + +GD + K++E L ++N ++ K ++N A + +I+
Sbjct: 135 LIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDA 194
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
V PD TYTT++ G CK G + A ++F M+ P++++ NTLI YCK+G M+ +
Sbjct: 195 VVKPDASTYTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITCNTLINGYCKKGDMENA 251
Query: 365 KSLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L MM PDT T ++ GY K+G L A R D +++
Sbjct: 252 RIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEA---------------RKWMDGMLI 296
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C P+L YN ++ LC +V +A L +M +K
Sbjct: 297 RGCN--------------------PNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKE 336
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+++T+ +++ G+S EA+ EM+ GM D++ V+I YC + ++A +LL
Sbjct: 337 NVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLL 396
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K S+NAV + E G+L K + L K+ +G PN ++ +I L +
Sbjct: 397 KEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRS 456
Query: 604 MER 606
R
Sbjct: 457 HGR 459
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+ E+ ++ G S+ S N +L L+++ +D+ + +++ +G P
Sbjct: 382 AYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLP 441
Query: 239 NTHTFNILTHVFCK-NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +++ + C+ +G + +V G ++ + ++GF+ D Y+ L+ +C+ G A
Sbjct: 442 NLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRA 501
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ +N + +L +++ +N +C +GKV EA Q+F M R D+ SY ++
Sbjct: 502 FYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQRVL 556
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 231/481 (48%), Gaps = 9/481 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L +P + + +V+ + S A+ ++ +VE+ K P DL++ + N
Sbjct: 163 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM-KQRP-------DLVTVSTLINGL 214
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+K G + E+ + ++ GFQP V+ +LN L K ++ +M I +
Sbjct: 215 CLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 273
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++I+ CK+G D ++E +G D+VTY++LI C G+ +D + R
Sbjct: 274 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 333
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M RN++PD+VT++ L++ KEGK+ EA +L++ M+ RG++PD ++YN+LI +CKE
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ E+ + M+ G PD T I++ Y K R+ + L E+ G+ + Y+
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L++ CQ + AA L + + G PS+ Y L++ LC + AL + ++M
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ + Y +I C + +A SL + + G+ PD V+I G C + +++A
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L + D +YN + L +EL + GF+ ++ T K +I
Sbjct: 574 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 633
Query: 600 L 600
L
Sbjct: 634 L 634
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 194/414 (46%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F + +G++P ++ + L+NG + + + + M + P+ T + L +
Sbjct: 153 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 212
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G V + ++++ E GF PD VTY +++ CK G A L+R M RN+
Sbjct: 213 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 272
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+V Y+ +++ LCK+G +A LF+ M +G+ D+V+Y++LI C +GK + +L
Sbjct: 273 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 332
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+G I PD T ++ + KEG+LL A L E+ G++ Y+ LI C++
Sbjct: 333 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 392
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
N A + + + G P + Y+ L+ S CK V D + L E+ + + P+ TY
Sbjct: 393 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 452
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ FC G+ A L EM+ G+ P +L++G C ++NKA + K
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
YN + + + L G P+ +T MI L K
Sbjct: 513 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 566
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 183/382 (47%), Gaps = 1/382 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L NG++ + ++ ++E M + P FN L + D V GF + +E G
Sbjct: 71 LRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 129
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D+ T +I+ YC+K +L AF + ++ PD +T++TL+NG C EG+V EA
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L RMV PD+V+ +TLI C +G++ E+ L+ M+ G PD T ++
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G AL+L +++ + S Y +I +LC+D A SL + G +
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC D + EM+ RNI P + T+ ALI F G+ EA L +E
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ G+ PD+ LI+G+C E +++A + K D +Y+ + N + +
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429
Query: 571 LSKLMELQKRFLRLGFAPNNLT 592
+ M L + G PN +T
Sbjct: 430 VDDGMRLFREISSKGLIPNTIT 451
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 249/502 (49%), Gaps = 18/502 (3%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
+L+ SV+A F+ + + PT + +++ L N+ A +L ++ +
Sbjct: 182 ILVSANCPSVAANVFYEMLSKG--VIPTVYTFGVVMKALCMVNEVDNACSLLRDMTK--H 237
Query: 158 DC-PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
C P+SV V+Q LI A K + E+ K + +G P + + N ++ GL
Sbjct: 238 GCVPNSV-VYQTLIH-------ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+LN I + ++ + M G PN T+ +L + C+ G VD+ L K+ P+ V
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDV 345
Query: 277 TYNTLISSYCKKGRLNDA-FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ LI+ Y K GRL++A +LY M + PD+ T+ TL++GLCK+G + A + +
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G +P++++Y TL+ +CK+ +++E+ +L EM G + ++++ K G+
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL+++ E+ G ++ LI LC+ +R A +L + DG + + YN
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ + + ++ +AL L ++M+ R TY LI FC +G + +A+ L DEM+
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++P + C +LING C V A LL + D +YN++ N + G++ +
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645
Query: 576 ELQKRFLRLGFAPNNLTCKYMI 597
L + G P+ +T +I
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLI 667
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 217/456 (47%), Gaps = 49/456 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++H L+ ++ + A+K+L E+ + C VD F D+I + ++
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEM--FLMGCLPDVDTFNDVI-------YGLCRL 291
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
I E K + L GF P+ ++ L+NGL ++ +D+ + ++ PN F
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHF 347
Query: 244 NILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
IL + + K+G +D+ N FL +K+ + G PD+ T+NTLI CKKG + A + M
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407
Query: 303 RRNVLPDLVTYTTLMNG-----------------------------------LCKEGKVR 327
P+L+TYTTL++G LCK GKV
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+A + M +G PDI ++NTLIF CK + +++ +L +M+ +G+ +T T ++
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ + G + AL LV ++ G + Y+ LI A C+ A L + + + V
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLV 587
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
PS N L+ LC+ V +AL L +M+ R + P + TY +LI C +G EA +L
Sbjct: 588 PSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNL 647
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+++ G+ PD+ LI +C + A LL
Sbjct: 648 FNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLL 683
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 7/249 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + ++ + D G +P I + N L+ GL K++ + +Y +M G+
Sbjct: 459 ALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIA 518
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N L H F + G + + + + G D +TYN LI ++CK G A L+
Sbjct: 519 NTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLF 578
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R++++P ++ L+NGLC+ GKV A +L M+HRGL+PD+V+YN+LI CK
Sbjct: 579 DEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKM 638
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS---ISR 415
G ++E+ +L ++ GI PD T ++ + + G A L++ GV I
Sbjct: 639 GNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLR----GVENAFIPN 694
Query: 416 DIYDYLIVA 424
D+ Y++V+
Sbjct: 695 DVTWYILVS 703
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+++ G I+E+ K L G ++ N L+ KL ++ +++EM R + P
Sbjct: 529 AFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVP 588
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + N+L + C+ G V L + G PD+VTYN+LI+ CK G + +AF L+
Sbjct: 589 SNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLF 648
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD +TY TL+ C+ G +A+ L R V P+ V++ L+ + KE
Sbjct: 649 NKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 7/227 (3%)
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS-L 437
D + I G KE +++ L+++++ G++ ++ ++ + N P AT L
Sbjct: 103 DVYHVLIDKLGAAKEFKVID--KLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRML 160
Query: 438 LERIGQDGYVPSLEIYNELMESL--CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
L+ G P+ + YN +++ L C SVA + EM+ + + P++ T+ ++
Sbjct: 161 LDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFY--EMLSKGVIPTVYTFGVVMKAL 218
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C + A SL+ +M + G +P+S + + LI+ VN+A LL + D
Sbjct: 219 CMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDV 278
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++N V + + +L R L GF PN++T +++ L +
Sbjct: 279 DTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCR 325
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 210/405 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F + ++G P +V+ N L++G K +D+ Q+ EEM R G +
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FCK G ++ G+ ++ EG ++VT++T + ++CK+G + +A L+ M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + + TYT L++G CK G++ +A L MV +G+ ++V+Y L+ CKE K+
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ +L M G+ + ++ G+ AL L+ E++ G+ + +Y L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC ++ A SLL ++ + G P+ IY +M++ K V +A+ + +++D
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ TY ALI C G EA+S ++M + G+ P+ Q L++G C +N+A
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
L K D Y A+ + + + G+L L+ + + G
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 203/479 (42%), Gaps = 61/479 (12%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P++++ CL H+LA + ++ + ++L LV L + PH DL+ + A + +
Sbjct: 63 PSTAHACLAAHLLARDRLYAHSRRVLSRLVALRR--PHLAASLVDLL------HRAALAL 114
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G R + + TL L+ L +D + + + + PNT T
Sbjct: 115 GPRRSALASVVDTL--------------LSVLADRGLLDDAVRAVARVRELRVPPNTRTC 160
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + ++ + GRL R ++
Sbjct: 161 NHILLRLARD---------------------------------RSGRL------VRRLFE 181
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P++ T+ +++ LCKEG++ EA LF RM G PD+V++N+LI Y K G++ E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L+ EM +G D T ++ + K GR+ +A ++R GV + + +
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C++ A L ++ G + Y L++ CK + DA++L DEMV + +
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY L+ C + EA ++ M ++G+ + + LI+G+ M K+ KA LL
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D Y A+ L + L + G PN + M+ + +K
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 152/330 (46%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + + G ++V+ L++GL K + + V M + G+ N
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L H N + +K G L +++ +G + D+ Y LI C +L++A L M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ + YTT+M+ K GKV EA + +++ G P++++Y LI CK G +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ S +M G+ P+ +V G K G L A+ L E+ G+S+ + +Y L
Sbjct: 520 DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTAL 579
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ + A +L ++ G L Y + C + + +A + EM+ I
Sbjct: 580 LDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 639
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
P + Y LI + +G EA+SL DEM
Sbjct: 640 APDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + E+ +K LD GFQP++++ L++GL K ID+ + +M +G+ P
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + L CKNG +++ ++ +G D V Y L+ Y K+G L+DAF L
Sbjct: 537 NVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 596
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + DL YT ++G C + EA ++F M+ G++PD YN LI Y K
Sbjct: 597 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKL 656
Query: 359 GKMQESKSLLYEM 371
G ++E+ SL EM
Sbjct: 657 GNLEEAISLQDEM 669
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 35/244 (14%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + I L+ GL ++ +D+ + +M G+ PN + + K+G V +
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+KI + GF P+++TY LI CK G +++A + M + P++ YT L++G
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK------------------- 360
LCK G + EA QLF+ MVH+G+S D V Y L+ Y K+G
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607
Query: 361 ----------------MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
M E++ + EM+G+GI PD ++ Y K G L A++L
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQD 667
Query: 405 ELQR 408
E++R
Sbjct: 668 EMER 671
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 206/401 (51%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N +++G K +++ +++EM + GI P+ T++ + H CK +DK F
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ +G PD TYN LI Y G+ +A +++ M R+++LPD+V TLM LCK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SY ++ Y +G + + L M+G+GI PD +T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 398
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G VP Y+ L++ C S+ A L E+++ ++ + + ++I C +GR
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ PD+ + +L++GYC+ + KA + + Y +
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 170/342 (49%), Gaps = 2/342 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+F R+ ++ G P + N L+ G + +V++EM R I P+ N L
Sbjct: 276 EAF--LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK G + + + + +G +PD+ +Y +++ Y KG L D L+ +M +
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T+ L+ G + +A +F+ M G+ P +V+Y T+I A C+ GKM ++
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G+ PD + ++QG+ G LL A L+ E+ G+ + + +I LC+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A ++ + G P +YN LM+ C + AL + D MV I+P++
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
Y L+ +C IGR E +SL EML+ G+ P + + ++I+G
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 196/404 (48%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ + + L FC+ D+ ++ L + E G PD+ +YN L+ S C
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + PD+V Y T+++G KEG V +A LF MV RG+ PD
Sbjct: 196 NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+Y++++ A CK M ++++ L +M+ G+ PD +T ++ GY G+ A+ +
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315
Query: 405 ELQR-------------------FG-VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R +G + +RD++D + + Q+ F+
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYTIMLNGYATK 374
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P + +N L+++ C + A+++ +EM D +KP + TY
Sbjct: 375 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTY 434
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I C IG+ +A+ ++M++ G++PD LI G+C + KA+ L+
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D + ++ N + L ++M+ Q F + +G P+
Sbjct: 495 NGMRLDIVFFGSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 535
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 176/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S +LNG C+ +++ M GI P+ +
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 397
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G P +VTY T+I++ C+ G+++DA + M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V+PD +V + +++N LCK G+V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL PD V YN L+ YC GKM+++ + M+ GI P+ +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y+ +I L + R A + + G
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ Y+ ++ L K +A+ L E+ N+K + T +I R EA
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + SG++P + ++I E V +AE
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLLKEGLVEEAE 731
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 173/402 (43%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVF 166
A+ FN ++ D +KP Y ++ L K AM+ ++++ +V D +
Sbjct: 415 AMIIFNEMR-DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
Q CT G + ++ + + ++ G + IV ++N L KL +
Sbjct: 474 QGF--CTH---------GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P+ +N+L +C G ++K + + G +P++V Y TL++ YC
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M ++ + P + Y +++GL + G+ A FH M G++ +
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y+ ++ K E+ L E+ + D T ++ G + R+ A +L +
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R G+ Y +I L ++ A + + G P + N ++ L K + +
Sbjct: 703 SRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 763 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 138/335 (41%), Gaps = 3/335 (0%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + D + + L+ G C+ + EA
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SYN L+ + C +GK ++ LL M G PD ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+ Y ++ ALC+ A + L ++ G +
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P YN L+ +A+ + EM ++I P + L+ C G+ EA +
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D M G PD +++NGY + + L D ++N + +A
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L K M + G P+ +T +I +L +
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCR 443
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 158/621 (25%), Positives = 263/621 (42%), Gaps = 135/621 (21%)
Query: 110 LTFFNWVKNDL-EIKPTSSNYCL--IVHILAWNNKFSFAMKMLCELVE------------ 154
++FF W ++ + E P+ S L +V L ++KF+ A +L +
Sbjct: 59 VSFFQWAQSSIPEAFPSDSPLPLLSVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSL 118
Query: 155 ----LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
L P S +F +S AY+ G + + F+K + + +P++++CN
Sbjct: 119 LHPNLHLSPPPSKALFDIALS-------AYLHAGKPHVALQVFQKMIRLKLKPNLLTCNT 171
Query: 211 LLNGLLKLN---CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
LL GL++ I +V+++M +IG+ + TFN+L + +C G ++ G LE++
Sbjct: 172 LLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 268 EE------------------------------------GFDPDLVTYNTLISSYCKKGRL 291
E G P+ VTYN L+ YCK G L
Sbjct: 232 SEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+AF + +M + N+LPDL TY L+NG+C G +RE +L M L PD+V+YNTL
Sbjct: 292 KEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTL 351
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIY---------------------------------- 377
I + G E+K L+ +M +G+
Sbjct: 352 IDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHG 411
Query: 378 --PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD T +++ Y K G L AL ++ E+ + G+ ++ + ++ ALC++ + A
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAH 471
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+LL+ + GY+ Y L+ + + V A + DEM I P+++T+ +LI
Sbjct: 472 NLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGL 531
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA---------------- 539
C G++ A+ DE+ ESG+LPD +I GYC E V KA
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 540 ----------------EALLGFFAKKF--QIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
E L FF + DT +YN + + F +D L + +L
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
P+ T +I SL +
Sbjct: 652 EEKRLEPDRFTYNSIITSLME 672
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 147/284 (51%), Gaps = 13/284 (4%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P IV+ + L+ LK+ + ++ EMG+ GI NT T N + CK VD+
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEA 470
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ L+ + G+ D VTY TLI Y ++ ++ AF ++ M R + P + T+ +L+ G
Sbjct: 471 HNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGG 530
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC GK A + F + GL PD ++N++I YCKEG+++++ E + + PD
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 380 TFTCQIIVQGYGKEGRLLSALN----LVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+TC I++ G KEG ALN L+ E + V+ Y+ +I A C+D + A
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVT-----YNTMISAFCKDKKLKEAY 645
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LL + + P YN ++ SL + +++A DE++ +
Sbjct: 646 DLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEA----DELLKK 685
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 193/414 (46%), Gaps = 21/414 (5%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTED------CNWAYVKVGLIRESFKTFRKTLD 198
++K ++VEL+K ++ DL CT + CN G IRE +
Sbjct: 290 SLKEAFQIVELMK----QTNILPDL--CTYNILINGVCN-----AGSIREGLELMDVMKS 338
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+ QP +V+ N L++G +L + ++ E+M G+ PN T NI CK ++
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREE 398
Query: 259 VNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
V + E +E GF PD+VTY+TLI +Y K G L+ A + R M ++ + + +T T++
Sbjct: 399 VTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ LCKE KV EAH L RG D V+Y TLI Y +E K++++ + EM I
Sbjct: 459 DALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKIT 518
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P T ++ G G+ A+ EL G+ ++ +I+ C++ R A
Sbjct: 519 PTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEF 578
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFC 496
+ + P N L+ LCK AL + ++ +R + TY +I FC
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREV--DTVTYNTMISAFC 636
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
+ EA L+ EM E + PD +I + +++A+ LL F+ KF
Sbjct: 637 KDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKF 690
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 172/343 (50%), Gaps = 13/343 (3%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---EGKVREA 329
P ++ +S+Y G+ + A +++ M R + P+L+T TL+ GL + + A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQ 388
++F MV G+S D+ ++N L+ YC EGK++++ +L M+ + PD T I++
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K+GRL +L+++++R G+ +R Y+ L+ C+ A ++E + Q +P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
L YN L+ +C S+ + L L D M ++P + TY LI +G S EA LM
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY----DTESYNAVFNM 564
++M G+ P+ + + C E+ K E + + +++ D +Y+ +
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEE---KREEVTRKVKELVEMHGFSPDIVTYHTLIKA 425
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + GDLS +E+ + + G N +T ++ +L K ERK
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK--ERK 466
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 47/349 (13%)
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
S+ A ++ND +KP + + + L K + + ELVE+ P V
Sbjct: 361 SLEAKKLMEQMEND-GVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIV-T 418
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC- 224
+ LI AY+KVG + + + R+ G + + ++ N +L+ L K +D+
Sbjct: 419 YHTLIK-------AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAH 471
Query: 225 ----------------------------------WQVYEEMGRIGICPNTHTFNILTHVF 250
+++++EM RI I P TFN L
Sbjct: 472 NLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGL 531
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C +G + +++ E G PD T+N++I YCK+GR+ AF Y + + PD
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
T L+NGLCKEG +A F+ ++ D V+YNT+I A+CK+ K++E+ LL E
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDIY 418
M + PD FT I+ ++G+L A L+ + +FG S+ R+++
Sbjct: 651 MEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFG-SMKRNLH 698
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 204/442 (46%), Gaps = 35/442 (7%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F K + +G QP+IV+ L+NGL K+ Q +++++M G P+ +T+ + +
Sbjct: 29 GFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIIN 88
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G+ G +K+EE G ++VTY+TLI S CK R+N+A ++ M +++ P
Sbjct: 89 GLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISP 148
Query: 309 DLVTYTTLMNGL-----------------------------------CKEGKVREAHQLF 333
+ TYT+L+ GL CKEGKV A +
Sbjct: 149 TIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVL 208
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M G+ PD+V+YN+L++ Y ++ E++ L M+ G PD F+ I++ GY K
Sbjct: 209 KTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKA 268
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
R+ A L E+ G + + Y+ LI LCQ R A L + + +G +P+L Y
Sbjct: 269 KRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTY 328
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK + A L M +KP+L Y L+ C G +A L E+
Sbjct: 329 AILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFV 388
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ P+ QI +ING C E +++A D SYN + F + D S+
Sbjct: 389 IGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESR 448
Query: 574 LMELQKRFLRLGFAPNNLTCKY 595
+ L GF + T +
Sbjct: 449 AVHLIGEMRDRGFITDAGTTAW 470
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 193/398 (48%), Gaps = 9/398 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y I++ L + + A + ++ E C +V + LI + K
Sbjct: 77 QPDDYTYTTIINGLCKIGETALAAGLFKKMEE--AGCQLNVVTYSTLIH-------SLCK 127
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ E+ F P+I + L+ GL + + + EM + I PN T
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN+L FCK G V G L+ + E G +PD+VTYN+L+ Y + +A L+ +M
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD+ +Y+ L+NG CK ++ EA QLF+ M+H+G +P+ VSYNTLI C+ G+++
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ L M NG P+ +T I++ G+ K+G L A L +Q + + +Y+ L+
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILV 367
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A+C+ A L + G P+++IY ++ LCK + +AL M D
Sbjct: 368 NAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCP 427
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
P +Y +I F AV L+ EM + G + D+
Sbjct: 428 PDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDA 465
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 174/368 (47%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ PNT T NIL + FC+ VD L K + G P +VT+ TLI+ K G+ A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L+ M R PD TYTT++NGLCK G+ A LF +M G ++V+Y+TLI +
Sbjct: 65 VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK ++ E+ + M I P FT ++QG R A L+ E+ + +
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
++ L+ C++ + AA +L+ + + G P + YN LM V +A L D
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M+ + KP + +Y LI +C R EA L +EM+ G P++ LI+G C
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+ +A+ L + + +Y + + F + G L K L + PN +
Sbjct: 305 RLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYN 364
Query: 595 YMIHSLWK 602
+++++ K
Sbjct: 365 ILVNAMCK 372
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 185/404 (45%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G P+ + N L+N +L +D + V + ++G+ P TF L + K G +
Sbjct: 4 AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ + G PD TY T+I+ CK G A L++ M ++VTY+TL++
Sbjct: 64 AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
LCK +V EA +F M + +SP I +Y +LI C + +E+ +LL EM I P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++V + KEG++L+A ++ + GV Y+ L+ A L
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + G P + Y+ L+ CK + +A L +EM+ + P+ +Y LI C +
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR EA L M +G LP+ +L++G+C + + KA L + + Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + N + G+L EL +G PN +I+ L K
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCK 407
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 160/337 (47%)
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+E G P+ T N LI+ +C+ R++ F + + + P +VT+TTL+NGL K GK
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+A +LF MV RG PD +Y T+I CK G+ + L +M G + T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ K R+ AL++ ++ +S + Y LI LC +R A++LL +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+P++ +N L+++ CK V A + M + ++P + TY +L+ + EA
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L D M+ G PD +LINGYC K +++A+ L + + SYN + +
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G L + +L K G PN T ++ K
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCK 337
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 140 NKFSFAMKMLCELVE--------LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFK 191
N + M E+VE + K C V + LI+ Y K I E+ +
Sbjct: 224 NSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILIN-------GYCKAKRIDEAKQ 276
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
F + + G P+ VS N L++GL +L + + +++ M G PN +T+ IL FC
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K G + K ++ P+LV YN L+++ CK G L DA L+ ++ + P++
Sbjct: 337 KQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQ 396
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
YTT++NGLCKEG + EA + F M G PD SYN +I + + + L+ EM
Sbjct: 397 IYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456
Query: 372 MGNGIYPDTFT 382
G D T
Sbjct: 457 RDRGFITDAGT 467
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 210/405 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F + ++G P +V+ N L++G K +D+ Q+ EEM R G +
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FCK G ++ G+ ++ EG ++VT++T + ++CK+G + +A L+ M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + + TYT L++G CK G++ +A L MV +G+ ++V+Y L+ CKE K+
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ +L M G+ + ++ G+ AL L+ E++ G+ + +Y L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC ++ A SLL ++ + G P+ IY +M++ K V +A+ + +++D
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P++ TY ALI C G EA+S ++M + G+ P+ Q L++G C +N+A
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
L K D Y A+ + + + G+L L+ + + G
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 203/479 (42%), Gaps = 61/479 (12%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P++++ CL H+LA + ++ + ++L LV L + PH DL+ + A + +
Sbjct: 63 PSTAHACLAAHLLARDRLYAHSRRVLSRLVALRR--PHLAASLVDLL------HRAALAL 114
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G R + + TL L+ L +D + + + + PNT T
Sbjct: 115 GPRRSALASVVDTL--------------LSVLADRGLLDDAVRAVARVRELRVPPNTRTC 160
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + ++ + GRL R ++
Sbjct: 161 NHILLRLARD---------------------------------RSGRL------VRRLFE 181
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P++ T+ +++ LCKEG++ EA LF RM G PD+V++N+LI Y K G++ E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L+ EM +G D T ++ + K GR+ +A ++R GV + + +
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C++ A L ++ G + Y L++ CK + DA++L DEMV + +
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY L+ C + EA ++ M ++G+ + + LI+G+ M K+ KA LL
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D Y A+ L + L + G PN + M+ + +K
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 152/330 (46%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + + G ++V+ L++GL K + + V M + G+ N
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L H N + +K G L +++ +G + D+ Y LI C +L++A L M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ + YTT+M+ K GKV EA + +++ G P++++Y LI CK G +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ S +M G+ P+ +V G K G L A+ L E+ G+S+ + +Y L
Sbjct: 520 DEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTAL 579
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ + A +L ++ G L Y + C + + +A + EM+ I
Sbjct: 580 LDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGI 639
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
P + Y LI + +G EA+SL DEM
Sbjct: 640 APDRAVYNCLISKYQKLGNLEEAISLQDEM 669
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + E+ +K LD GFQP++++ L++GL K ID+ + +M +G+ P
Sbjct: 477 ACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + L CKNG +++ ++ +G D V Y L+ Y K+G L+DAF L
Sbjct: 537 NVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALK 596
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + DL YT ++G C + EA ++F M+ G++PD YN LI Y K
Sbjct: 597 AKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKL 656
Query: 359 GKMQESKSLLYEM 371
G ++E+ SL EM
Sbjct: 657 GNLEEAISLQDEM 669
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 35/244 (14%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + I L+ GL ++ +D+ + +M G+ PN + + K+G V +
Sbjct: 428 GLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+KI + GF P+++TY LI CK G +++A + M + P++ YT L++G
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK------------------- 360
LCK G + EA QLF+ MVH+G+S D V Y L+ Y K+G
Sbjct: 548 LCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 607
Query: 361 ----------------MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
M E++ + EM+G+GI PD ++ Y K G L A++L
Sbjct: 608 LFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQD 667
Query: 405 ELQR 408
E++R
Sbjct: 668 EMER 671
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 244/493 (49%), Gaps = 12/493 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F +W+ + KP +Y +++ LA K A+++ E+ E + V +
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE--RGVAPDVTCYNI 224
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI ++K + + + + + L D P++ + N +++GL K +D C ++
Sbjct: 225 LID-------GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+E M + + +T++ L H C G+VDK +++E D+VTYNT++ +C+
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ ++ L+RIM +N + ++V+Y L+ GL + GK+ EA ++ M +G + D +
Sbjct: 338 CGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y I C G + ++ ++ E+ +G + D + I+ K+ RL A NLV E+
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ GV ++ + + LI L +D+R A+ L +G++G P++ YN L+ LCK
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A EM++ KP L TY L+C C + A+ L + L+SG+ D + +LI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C ++ A ++ + + +YN + F + GD ++ + ++G
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 588 PNNLTCKYMIHSL 600
P+ ++ ++ L
Sbjct: 637 PDIISYNTIMKGL 649
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 224/530 (42%), Gaps = 51/530 (9%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK- 157
LL+ + + +A F+ P ++ ++ H + + + + +VEL++
Sbjct: 16 LLKSEKNPRAAFALFDSATR----HPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 158 -DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGL 215
+C DV +I Y K + ++ F++ ++ G +P+I S N LLN
Sbjct: 72 QECKCDEDVALSVIK-------TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++ + ++ G+ PN T+N+L + CK + +K GFL+ + +EGF PD+
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE------------ 323
+Y+T+I+ K G+L+DA L+ M R V PD+ Y L++G KE
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 324 ------------------------GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
G+V + +++ RM D+ +Y++LI C G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ +++S+ E+ D T ++ G+ + G++ +L L + S++ Y+
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYN 363
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI L ++ + AT + + GY Y + LC V AL + E+
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ Y ++I C C R EA +L+ EM + G+ +S +C LI G + + +A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
L K SYN + + G + K L G+ P+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 167/379 (44%), Gaps = 41/379 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I+ES + +R ++ +IVS N L+ GLL+ ID+ ++ M G
Sbjct: 334 GFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ I H C NG V+K G ++++E G D+ Y ++I CKK RL +A L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + V + L+ GL ++ ++ EA M G P +VSYN LI CK
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK E+ + + EM+ NG PD T Y
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKT-----------------------------------Y 537
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+D + A L + Q G + ++N L+ LC + DA+ + M
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN +L TY L+ F +G S A + M + G+ PD ++ G CM + V+
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 539 AEALLGFF--AKKFQIYDT 555
A + FF A+ I+ T
Sbjct: 658 A---MEFFDDARNHGIFPT 673
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 437 LLERIGQDGYVPSLEIYNELMESL-CKCDS-VADALL-------LKDEMVD-----RNI- 481
+L R+ + V + EL+ S CKCD VA +++ + D+ +D R I
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108
Query: 482 --KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P++ +Y L+ F + + SL +G+ P+ Q VLI C +K+ KA
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
L + K+ D SY+ V N A+ G L +EL G AP ++TC
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP-DVTC 221
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 205/431 (47%), Gaps = 46/431 (10%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L ++ K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLHSYCTMIHFLC-THQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W Y+E+
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y ++G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
F L M+ V PD+ TY+ L+NGLCKE K+ EA++LF M+ +GL P+ V++ TLI
Sbjct: 189 KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK GK+ + + +M+ + PD T ++ G K+G L A NL+ E+ G+
Sbjct: 249 DGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
P Y L++ CK + A
Sbjct: 309 -----------------------------------PDKITYTTLIDGSCKDGDLETAFEY 333
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+ M++ NI+ Y ALI C GRS +A ++ EML G+ PDS ++IN +C
Sbjct: 334 RKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCK 393
Query: 533 EKDVNKAEALL 543
+ DV LL
Sbjct: 394 KGDVWTGSKLL 404
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 151/271 (55%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR S F G +PS+VS N L+NG ++ +D+ +++ M G+ P+
Sbjct: 146 FCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D+ N ++ ++G P+ VT+ TLI +CK G+++ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++ PDL+TY TL+ GLCK+G +++A L + M +GL PD ++Y TLI CK+G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 326 DLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DG+VPS+
Sbjct: 386 MIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + F + LD G P+ V+ L++G K +D ++Y++M + P+ T+N L
Sbjct: 224 EANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK GD+ + + ++ +G PD +TY TLI CK G L AF + M N+
Sbjct: 284 YGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIR 343
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D V YT L++GLC+EG+ +A ++ M+ GL PD +Y +I +CK+G + L
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKL 403
Query: 368 LYEMMGNGIYPDTFT 382
L EM +G P T
Sbjct: 404 LKEMQRDGHVPSVVT 418
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CKEG+++ S+S+ + G+ P + ++ GY ++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQ 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 185 GDLDKGFRLKSAMHASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + +A L EM+D+ + P+ T+ LI C G+ A+ + +ML
Sbjct: 210 SVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + +DGDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR + +++ +I L
Sbjct: 330 AFEYRKRMIEENIRLDDVAYTALISGL 356
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E+ G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ C++ + S+ + I + G PS+ +N LM + +
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK M ++P + TY LI C + EA L EML+ G++P+ LI+G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + L G P+
Sbjct: 252 CKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM CK + + + D + ++PS+ ++ L+ + G +
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M SG+ PD VLING C E +++A L K + + ++ + +
Sbjct: 191 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 203/415 (48%), Gaps = 11/415 (2%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN----- 177
T +YC ++H L + S A K L ++V K + VF ++ T+ +
Sbjct: 1 TLDSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 59
Query: 178 ---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY++ G +R++ + +R T + F +C +L ++KL W YEE+
Sbjct: 60 GLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILEC 119
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G + + FNIL H FCK GD+ I + G P +V++NTL++ Y + G L++
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 179
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 180 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 239
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 240 HCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ Y LI C++ A +R+ Q+ Y L+ LC+ DA +
Sbjct: 300 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLR 359
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ +KP TY +I FC G L+ EM G +P VL+NG
Sbjct: 360 EMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ + K + +
Sbjct: 54 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFY 113
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CKEG ++ ++S+ + G+ P + ++ GY +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 174 GDLDEGFRLKSAMHASGVQ-----------------------------------PDVYTY 198
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 199 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLS 258
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + ++GDL
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLET 318
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 319 AFEHRKRMIQENIRLDDVAYTALISGL 345
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 2 LDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 61
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 62 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECGY 121
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A S+ I + G PS+ +N LM + + +
Sbjct: 122 PASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 181
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + +A L DEML+ G++P+ LI+G+C
Sbjct: 182 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHC 241
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + +L G P+ +
Sbjct: 242 KSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 301
Query: 592 TCKYMI 597
T +I
Sbjct: 302 TYTTLI 307
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + + + ++PS+ ++ L+ + +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L M SG+ PD VLING C E ++ A L K + + ++
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 233
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 234 TTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 277
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 223/461 (48%), Gaps = 34/461 (7%)
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK----------------------FSFAMK 147
+ FF W + + + +Y ++ +LA + + + + ++
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60
Query: 148 MLCELVELVKDCPHSVDVFQDLIS--CTEDC-NWAYVKVGLIR-----ESFKTFRKTLDV 199
LC+ + + VF+ + + C+ + +++ + GL R E+ + + +D
Sbjct: 61 SLCQ----AQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG 116
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP++V+ LL+GL K+ + + ++ M G P+ +N+L F K GD+ +
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
E++ E+G P + TYN+L+S + +KG L++ M R+ +P++ T+ L++G
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK G + EAH+LF M G PD+VSYNTLI C +GK E++ LL EM+ +G+ PD
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ I++ GY K G L A+ L E+ + G+ Y +I LC+ + AA + +
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +G P + L+ LC+ + + ++ L MV P + Y L+ C
Sbjct: 357 DMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK 416
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
RS + + E+ E G PD +I +V++ D + AE
Sbjct: 417 RSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 201/422 (47%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + T+ L G P+ + +LL L + ++ V+ M G PN
Sbjct: 28 AKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNV 87
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+++IL C+ VD+ L ++ + G P++VTY +L+S CK G+L +A L+
Sbjct: 88 FSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSR 147
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R PD V Y L++G K+G + EA++LF M+ +G P + +YN+L+ + ++G+
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGE 207
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+SL +M+ G P+ FT ++ G+ K G ++ A L +E++ G Y+
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI +C +P A LL + + G P + YN L++ K ++ A+ L E+
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P +Y +I C C G+ G A + +M+ +G PD+ + L+ G C + + ++
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + YN + + + E+ GF+P+ K ++ +L
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Query: 601 WK 602
+
Sbjct: 448 RR 449
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 171/365 (46%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T ++N L V K+G D V G + G P+ TY L+ S C+ R +A ++
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + P++ +Y+ L+ GLC+ KV EA +L + M+ G P++V+Y +L+ CK
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK++E+ L M+ G PD +++ G+ K+G + A L E+ G + Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ + SL + + + G VP++ +N L++ CK + +A L EM
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P + +Y LI C G+ EA L+ EM+ SG+ PD +LI+GY ++
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K D SY+ + + G + + K + G AP+ ++
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375
Query: 599 SLWKG 603
L +G
Sbjct: 376 GLCRG 380
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 223/482 (46%), Gaps = 9/482 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP + ++ L ++ A+ ML E+ S V D + T +V
Sbjct: 181 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEM--------SSSGVAPDETTFTT-LMQGFV 231
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I+ + + + L++G P+ V+ N L+NG KL ++ ++ G P+
Sbjct: 232 EEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQI 291
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C+NG V ++ + +EG DPD+ TYN +++ CK G+L +A + M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R LPD+ T+ TL+ LC ++ EA L ++ +GLSPD+ ++N LI A CK G
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP 411
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q + L EM +G PD T ++ G+L AL+L+ E++ G S Y+ +
Sbjct: 412 QLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI 471
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A + +++ G + +N L++ LCK + DA L +M+ +
Sbjct: 472 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGL 531
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ TY +++ +C G +A ++ M +G D LING C A
Sbjct: 532 QPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALK 591
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL K ++YN V + M L + +G P+ T K + L
Sbjct: 592 LLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLC 651
Query: 602 KG 603
+G
Sbjct: 652 RG 653
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 219/496 (44%), Gaps = 12/496 (2%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR Q D +AL N + P Y I+ L + MK+L + E+ ++
Sbjct: 51 LREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVL--VTEMRREG 108
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD--VGFQPSIVSCNFLLNGLLK 217
H V V +Y + L ++ LD G Q V N LLN L++
Sbjct: 109 -HQVRV-----GVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVE 162
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + VY EMG GI P+ TFN L C+ V LE++ G PD T
Sbjct: 163 GSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETT 222
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ TL+ + ++G + A + M P VT L+NG CK G+V +A + +
Sbjct: 223 FTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G PD ++YNT + C+ G + + ++ M+ G PD FT I+V K G+L
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 342
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A ++ ++ G ++ LIVALC NR A L ++ G P + +N L+
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+LCK AL L +EM P TY LI C +G+ G+A+ L+ EM ES
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM-ESAGC 461
Query: 518 PDSQIC-RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P S + +I+G C + + +AE + + + ++N + + +D + +
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521
Query: 577 LQKRFLRLGFAPNNLT 592
L + + G PNN+T
Sbjct: 522 LISQMISEGLQPNNIT 537
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 200/408 (49%), Gaps = 10/408 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y V+ L N A+K++ +V+ H DVF I C K
Sbjct: 287 EPDQITYNTFVNGLCQNGHVGHALKVMDVMVQE----GHDPDVFTYNIVVNCLC-----K 337
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ + ++ G P I + N L+ L N +++ + ++ G+ P+ +T
Sbjct: 338 NGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYT 397
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FNIL + CK GD E+++ G PD VTYNTLI + C G+L A L + M
Sbjct: 398 FNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME 457
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
VTY T+++GLCK+ ++ EA ++F +M +G+S + +++NTLI CK+ ++
Sbjct: 458 SAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRID 517
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ L+ +M+ G+ P+ T I+ Y K+G + A +++ + G + Y LI
Sbjct: 518 DANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLI 577
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R A LL + G + + YN +++SL + ++ DA+ L EM +
Sbjct: 578 NGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEP 637
Query: 483 PSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P TY+ + C G G EA + EM++ G +P+ R+L G
Sbjct: 638 PDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEG 685
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 148/343 (43%), Gaps = 37/343 (10%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA--FYLYRIMYRRNVLPDLVTYTTLMNG 319
+ ++ EG + ++ + SY ++ DA L ++ + D V Y L+N
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNV 159
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L + K++ ++ M RG+ PD+V++NTL+ A C+ +++ + +L EM +G+ PD
Sbjct: 160 LVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPD 219
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++QG+ +EG + +AL + + G S
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCS--------------------------- 252
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
P+ N L+ CK V DAL + + +P TY + C G
Sbjct: 253 --------PTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
G A+ +MD M++ G PD +++N C + +A+ +L ++ + D ++N
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFN 364
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + ++L ++ G +P+ T +I++L K
Sbjct: 365 TLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 106/264 (40%), Gaps = 35/264 (13%)
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ D V YN L+ + KM+ +++ EM GI PD T
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVT----------------- 187
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
++ L+ ALC+ ++ A +LE + G P + LM+
Sbjct: 188 ------------------FNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQG 229
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ S+ AL +K M++ P+ T LI +C +GR +A+ + + + +G PD
Sbjct: 230 FVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPD 289
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+NG C V A ++ ++ D +YN V N ++G L + +
Sbjct: 290 QITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 349
Query: 580 RFLRLGFAPNNLTCKYMIHSLWKG 603
+ + G P+ T +I +L G
Sbjct: 350 QMVERGCLPDITTFNTLIVALCSG 373
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 216/451 (47%), Gaps = 40/451 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L + A +L E+ L+ C V+ F D++ +
Sbjct: 208 PDAVLYQTVIHALCDQGGVTEAATLLNEM--LLMGCAADVNTFDDVVR-------GMCGL 258
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC------------------- 224
G +RE+ + + + G P +++ FLL GL ++ D+
Sbjct: 259 GRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVI 318
Query: 225 ------------WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
++YE MG G P+ HT++IL H CK G + L ++E++GF
Sbjct: 319 GGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 378
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++VTY ++ S+CK G +D L M + + + Y ++ LCK+G++ EA L
Sbjct: 379 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 438
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G +PDI SYNT+I+ C +M+E++ + ++ G+ + T I+ +
Sbjct: 439 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 498
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+GR A+ L E+ G S+ Y+ LI A+C+D + LLE + + G P+
Sbjct: 499 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 558
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK V DAL L +M+++ + P + TY LI C +G A++L++++
Sbjct: 559 YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 618
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ PD +LI+ +C + ++ A LL
Sbjct: 619 NENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 171/331 (51%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + + G QP + + L++GL KL I ++ EM + G PN T+
Sbjct: 325 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 384
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
I+ H FCKNG D LE++ +G + YN +I + CK GR+++A L + M
Sbjct: 385 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 444
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ +Y T++ LC ++ EA +F ++ G+ + ++YNT+I A ++G+ Q+
Sbjct: 445 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 504
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ +G D + +++ K+G + +L L+ E+ G+ + Y+ LI
Sbjct: 505 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 564
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC++ R A L +++ G P + YN L+ LCK + AL L +++ + N+ P
Sbjct: 565 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP 624
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ TY LI C + +A L++ + +
Sbjct: 625 DIITYNILISWHCKVRLLDDAAMLLNRAMAA 655
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 205/471 (43%), Gaps = 69/471 (14%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDK 258
G QPS S N +L+ L + +C +Y M R + P T TF + C+ G D+
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L + G PD V Y T+I + C +G + +A L M D+ T+ ++
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK--------------------- 357
G+C G+VREA +L RM+ +G P +++Y L+ C+
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313
Query: 358 ----------EGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
EGK+ E+ L YE MG G PD T I++ G K GR+ SA+ L+ E+
Sbjct: 314 FNTVIGGCLAEGKLAEATEL-YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372
Query: 407 QRFG-----------------------------------VSISRDIYDYLIVALCQDNRP 431
++ G ++++ Y+ +I ALC+D R
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L++ + G P + YN ++ LC + + +A + + +++ + + TY +
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I GR +AV L EM+ G D LI C + +V+++ LL A+K
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ SYN + + ++ + +EL K+ L G AP+ +T +I+ L K
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++ G +++ + ++ + G +VS N L+ + K +D+ + EEM GI P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++NIL CK V +++ +G PD+VTYNTLI+ CK G ++ A L
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
++ NV PD++TY L++ CK + +A L +R +
Sbjct: 615 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 202/412 (49%), Gaps = 11/412 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN-------- 177
+YC ++H L + S A K L +LV K + VF ++ T+ +
Sbjct: 3 SYCTMIHFLCTHQMLSEA-KSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGLI 61
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY++ G +R++ + +R T + +C +L L+KL W YEE+ G
Sbjct: 62 TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGYP 121
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L++ F L
Sbjct: 122 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI +CK
Sbjct: 182 KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCK 241
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + M+ + PD T ++ G K G L A +L+ E+ G+ +
Sbjct: 242 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFT 301
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C++ A +R+ Q+ Y L+ LC+ DA + EM+
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+KP + TY +I FC G + L+ EM +G P VL+NG
Sbjct: 362 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 152/354 (42%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R +L L+
Sbjct: 53 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFY 112
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ NG+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +R+ +P L YN L+ LCK + A L DEM
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM 292
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 293 KGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVD 352
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L D +Y + N F + GD+ K +L K R G AP+ +T
Sbjct: 353 AEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVT 406
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML +G+ PD VLING C E ++ A L K I + ++
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + ++G + ME+ KR L P+ +T +I+ L K + K
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLK 281
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 216/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S AM ++ +V K C + + +++ K
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEAMALIDRMV--AKGCQPDLVTYGVVVN-------GLCK 847
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +F K +P ++ N +++GL K +D +++EM GI PN T
Sbjct: 848 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E +PD+ T++ LI ++ K+G+L +A LY M
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ P +VTY++L+NG C ++ EA Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E + EM G+ +T T I++QG + G A + E+ GV + Y+ L+
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC++ + A + E + + P++ YN ++E +CK V D L + + +K
Sbjct: 1088 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 1147
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + Y +I FC G EA +L EM E G LP+S LI + D + L
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 1207
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ D + V NM DG L K
Sbjct: 1208 IKEMRSCGFAGDASTIGLVTNML-HDGRLDK 1237
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 203/416 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP +V+ ++NGL K D + + +M + + P +N +
Sbjct: 818 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK +D +++E +G P++VTY++LIS C GR +DA L M R +
Sbjct: 878 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T++ L++ KEGK+ EA +L+ MV R + P IV+Y++LI +C ++ E+K +
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ + + E+ + G+ + Y+ LI L Q
Sbjct: 998 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + DG P++ YN L++ LCK + A+++ + + ++P++ T
Sbjct: 1058 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 1117
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ PD +I+G+C + +A+AL
Sbjct: 1118 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 1177
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ YN + DGD EL K GFA + T + + L G
Sbjct: 1178 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 1233
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 199/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D + E+M +GI N +T++IL + FC+ +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P++VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y ++ CK G + +LL +M + P
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P + ++ L+++ K + +A L DEMV R+I PS+ TY +LI FC R
Sbjct: 933 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ PD LI G+C K V + + +++ + +T +YN +
Sbjct: 993 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD E+ K + G PN +T ++ L K
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 192/395 (48%), Gaps = 8/395 (2%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K L +G++P V+ L+NG + N + + ++M IG P+ +N + CK
Sbjct: 248 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V+ F ++IE +G P++VTY L++ C R +DA L M ++ + P+++TY+
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 367
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ K GKV EA +LF MV + PDIV+Y++LI C ++ E+ + M+
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G D + ++ G+ K R+ + L E+ + G+ + Y+ LI Q A
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
++ G P + YN L+ LC + AL++ ++M R + + TY +I
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G+ EA SL + G+ PD +++G C + +++ EAL ++ + +
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 607
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ + DGD++ EL K+ L G+AP+
Sbjct: 608 DCTLS--------DGDITLSAELIKKMLSCGYAPS 634
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 184/398 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ ++KL D + ++M +GI + +TFNI+ + FC V
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD VT +L++ +C++ R++DA L M PD+V Y +++ LCK
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V +A F + +G+ P++V+Y L+ C + ++ LL +M+ I P+ T
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ + K G++L A L E+ R + Y LI LC +R A + + +
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G + + YN L+ CK V D + L EM R + + TY LI F G
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A +M G+ PD +L+ G C ++ KA + K+ D +Y V
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G + + L G P+ +T M+ L
Sbjct: 546 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
NGL +L +D ++ EM + P+ F+ L K D V E+++ G
Sbjct: 669 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ TY+ LI+ +C++ +L A + M + P++VT ++L+NG C ++ EA L
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M G P+ V++NTLI K E+ +L+ M+ G PD T ++V G K
Sbjct: 788 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G A NL+ ++++ + IY+ +I LC+ A +L + + G P++
Sbjct: 848 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LC +DA L +M++R I P + T+ ALI F G+ EA L DEM+
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P LING+CM +++A+ + F K D +YN + F + +
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ ME+ + + G N +T +I L++
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 258/558 (46%), Gaps = 71/558 (12%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V+ A FF ++ I+P Y +V+ L ++++S A ++L ++++ K
Sbjct: 304 CKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK--KKIT 360
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + L+ A+VK G + E+ + F + + + P IV+ + L+NGL +
Sbjct: 361 PNVITYSALLD-------AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID+ Q+++ M G + ++N L + FCK V+ ++ + G + VTYNT
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473
Query: 281 LISSY-----------------------------------CKKGRLNDAFYLYRIMYRRN 305
LI + C G L A ++ M +R
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ D+VTYTT++ G+CK GKV EA LF + +GL PDIV+Y T++ C +G + E +
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593
Query: 366 SLLYEMMGNGIYPD---------TFTCQIIVQ----GYG-------KEGRLLSALNLVVE 405
+L +M G+ + T + ++I + GY K G AL+L
Sbjct: 594 ALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSL--- 650
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
L+ F S D + L + + A +L + + PS+ +++L+ ++ K +
Sbjct: 651 LRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK 710
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ L ++M + I + TY LI CFC + A++++ +M++ G P+
Sbjct: 711 FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSS 770
Query: 526 LINGYCMEKDVNKAEALLG-FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
L+NGYC K +++A AL+ F +Q +T ++N + + S+ M L R +
Sbjct: 771 LLNGYCHSKRISEAVALVDQMFVTGYQ-PNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829
Query: 585 GFAPNNLTCKYMIHSLWK 602
G P+ +T +++ L K
Sbjct: 830 GCQPDLVTYGVVVNGLCK 847
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+LNDA L+ M + P +V + L++ + K K L +M G+ D+ ++N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I +C ++ + S+L +M+ G PD T +V G+ + R+ A++LV ++
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G Y+ +I +LC+ R A + I + G P++ Y L+ LC +DA
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +M+ + I P++ TY AL+ F G+ EA L +EM+ + PD LING
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C+ +++A + K + D SYN + N F + + M+L + + G N
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467
Query: 590 NLTCKYMIHSLWKG 603
+T +I ++
Sbjct: 468 TVTYNTLIQGFFQA 481
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 233/504 (46%), Gaps = 25/504 (4%)
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCL--IVHILAWNNKFSFAMKMLCELVE--------- 154
V AL F WV ++P + L H+L + +A +L L +
Sbjct: 32 GVLALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLF 91
Query: 155 -LVKD----CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
++ D C + VF LI Y++ G++ + TF L GF+PS+ +CN
Sbjct: 92 GVLMDTYPLCSSNPAVFDLLIR-------VYLRQGMVGHAVNTFSSMLIRGFKPSVYTCN 144
Query: 210 FLLNGLLKLNCIDQ-CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
++ ++K NC W +++M +CPN +FNIL V C G + K L +E
Sbjct: 145 MIMASMVK-NCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMER 203
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P +V+YNTL+S CKKGR A L M + + D+ TY ++ LC+ + +
Sbjct: 204 NGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQ 263
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+ + +M ++ ++P+ VSYNTLI + KEGK+ + + EM+ + P+ T I++
Sbjct: 264 GYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY G AL ++ ++ V + L+ L + + A ++LER +
Sbjct: 324 GYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSL 383
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + +++ LC+ + +A L EM + P + T+ LI FC +G +A +M
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVM 443
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
++ G +P++ I LI C +V +A Q D + N++ E+
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCEN 503
Query: 569 GDLSKLMELQKRFLRLGFAPNNLT 592
G L + E R+G PN++T
Sbjct: 504 GKLVEAEEFLHHISRIGLVPNSVT 527
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 130/548 (23%), Positives = 244/548 (44%), Gaps = 17/548 (3%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPH-LGAHEISRVLLRCQSDSVSALTFFNWVK 117
N +D +C + + +L L + K + P+ + + + ++ V+ F +
Sbjct: 249 NMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI- 307
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+L + P Y ++++ N F A+++L +++E P+ V + L +
Sbjct: 308 -ELNLSPNLITYNILINGYCINGNFEEALRVL-DVMEANDVRPNEVTIGTLLNGLYKSAK 365
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ + I E + R +L+ +S +++GL + +D+ +Q+ EM + G+
Sbjct: 366 FDVARN--ILERYCINRTSLNC------ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVH 417
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ TF++L + FCK G+++K + KI EGF P+ V ++TLI + CK G + +A
Sbjct: 418 PDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKF 477
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y M D T +L+ LC+ GK+ EA + H + GL P+ V+++ +I Y
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + S+ M+ G +P FT +++ K A L+ +L +++
Sbjct: 538 VGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LIV + + A L E + Q+ +P Y ++ L + + A + ++
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657
Query: 478 DRNIKPSLS-TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ I S Y I G+S A+ L EM E G+ D + +GY V
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A +L+ K I + ++N + + ++ D+ +L R GF PN LT
Sbjct: 718 FSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLT---- 773
Query: 597 IHSLWKGM 604
HSL G+
Sbjct: 774 YHSLILGL 781
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 191/439 (43%), Gaps = 12/439 (2%)
Query: 171 SCTEDCNW-AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ-CWQVY 228
S T DC Y VG +F F + + G PS F LLK+ C Q W+
Sbjct: 525 SVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPS----PFTYGSLLKVLCKGQNFWEAR 580
Query: 229 EEMGRIGICP---NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + ++ P +T ++N L K+G++ + E++ + PD TY ++S
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640
Query: 286 CKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
++GRL AF +L R+M + + + + YT ++GL K G+ + A LF M +GLS D
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+++ N++ Y + GK+ + SL+ + + P+ T I++ GY + ++S L
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKC 463
++R G +R Y LI+ LC +L+ I + + L +N L+ C+
Sbjct: 761 LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLT-FNMLIRKCCEI 819
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ + + L M + T +A+ S M EML+ G +P S+
Sbjct: 820 NDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQY 879
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
++ C D+ A L D + A+ A G + + M + +R LR
Sbjct: 880 CTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLR 939
Query: 584 LGFAPNNLTCKYMIHSLWK 602
+ P T ++H K
Sbjct: 940 MKKIPTTSTFTTLMHVFCK 958
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 152/362 (41%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F++ + G +++ N + +G ++ + + + + PN
Sbjct: 678 KAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLT 737
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL H + + D+ + GF P+ +TY++LI C G L + ++
Sbjct: 738 TFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMF 797
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ D +T+ L+ C+ + + L H M +S D + + +
Sbjct: 798 IAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVS 857
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q ++EM+ G P + +++ + G + A L ++ G+S+ +
Sbjct: 858 QNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAM 917
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L + A +L+R+ + +P+ + LM CK D+ +A LK M +
Sbjct: 918 VRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRV 977
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
K + Y LI C G A+ +E+ + G+LP+ RVL++ + V++ E
Sbjct: 978 KLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI 1037
Query: 542 LL 543
+L
Sbjct: 1038 VL 1039
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 142/338 (42%), Gaps = 35/338 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y ++G + + KT + P++ + N LL+G + I C+++Y M R G P
Sbjct: 710 GYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFP 769
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL- 297
N T++ L C +G ++ L+ E D +T+N LI C+ L+ L
Sbjct: 770 NRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLT 829
Query: 298 -----YRI-----------------------------MYRRNVLPDLVTYTTLMNGLCKE 323
+R+ M ++ +P Y T+M +C+
Sbjct: 830 HNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRV 889
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G ++ A +L +MV G+S D + ++ GK++E+ +L M+ P T T
Sbjct: 890 GDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTF 949
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ + K+ A NL + ++ + V + Y+ LI A C + A E I Q
Sbjct: 950 TTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQ 1009
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
G +P++ Y L+ ++ V+ ++ ++ DR +
Sbjct: 1010 KGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL 1047
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 35/218 (16%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++D LI + A + + G+ PS+ N +M S+ K +M
Sbjct: 107 VFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQM 166
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP------------------ 518
+ + P++S++ LI C G+ +AV+++ M +G +P
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226
Query: 519 ---------------DSQIC--RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+ +C + I+ C + +L K + SYN +
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
N F ++G + + + L +PN +T +I+
Sbjct: 287 INGFVKEGKIGVATRVFNEMIELNLSPNLITYNILING 324
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 207/418 (49%), Gaps = 11/418 (2%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-------GRIGICPNTHTFN 244
FR+ ++G+ P + S N L+ GL C+++ Q E+ G PN ++N
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGL----CVEKKSQEALELLIHMTADGGYNCSPNVVSYN 204
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
+ F K G+VDK ++ +G PD+VTYN+LI CK ++ A + + M+ +
Sbjct: 205 TVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK 264
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
V+PD TY ++ G C G++ EA +L +M GL PD+V+Y+ LI YCK G+ E+
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+S+ M+ G P++ I++ GY +G L+ +L+ + R G+ ++ LI A
Sbjct: 325 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 384
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ A + + Q+G P + Y+ ++ LCK V DA+ ++MV + P+
Sbjct: 385 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPN 444
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ ++ +LI C IG + L EM+ G+ PD+ +++ C E V +A+
Sbjct: 445 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 504
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D SYN + + + G + + ++ R + +G P++ T +++ +K
Sbjct: 505 MVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 198/429 (46%), Gaps = 35/429 (8%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+G E+ F + G +P+ + LL+G + + + M R GI
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
FNIL + K+G VDK ++ + G PD+V+Y+T+I CK GR+ DA Y +
Sbjct: 375 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFN 434
Query: 300 IMYRRNVLPDLVTYTTLMNGLC-----------------------------------KEG 324
M + P+++++T+L++GLC KEG
Sbjct: 435 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 494
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V EA F ++H G+ PD+VSYNTLI YC GKM ES L M+ G+ PD++T
Sbjct: 495 RVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYN 554
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ GY K GR+ AL L E+ R V + ++ L Q R AA L ++
Sbjct: 555 SLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDR 614
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G +E YN ++ LC+ V +AL + +++ + + + T+ +I +GR EA
Sbjct: 615 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEA 674
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
SL M+ G +PD ++I + E + +++ L K D+ N +
Sbjct: 675 KSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRR 734
Query: 565 FAEDGDLSK 573
E GD+ +
Sbjct: 735 LLEKGDVRR 743
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 179/364 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + +++ F + + G P +V+ N L++GL K +D+ + + M G+ P
Sbjct: 209 GFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMP 268
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+NI+ +C G +++ L+K+ G PD+VTY+ LI YCK GR +A ++
Sbjct: 269 DTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVF 328
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P+ Y L++G +G + + L M+ G+ + ++N LI AY K
Sbjct: 329 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 388
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ + EM NG+ PD + ++ K GR+ A+ ++ G+S + +
Sbjct: 389 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISF 448
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC L + G P N +M++LCK V +A D ++
Sbjct: 449 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 508
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KP + +Y LI +C +G+ E++ +D M+ G+ PDS L+NGY V
Sbjct: 509 IGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVED 568
Query: 539 AEAL 542
A AL
Sbjct: 569 ALAL 572
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 202/422 (47%), Gaps = 2/422 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +G + E+ + +K G QP +V+ + L+ K+ + V++ M R G P
Sbjct: 279 GYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKP 338
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ ++IL H + G + V L+ + +G + +N LI +Y K G ++ A +
Sbjct: 339 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 398
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+V+Y+T+++ LCK G+V +A F++MV GLSP+I+S+ +LI C
Sbjct: 399 TEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 458
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ ++ + L +EM+ GI+PD I+ KEGR++ A + + GV Y
Sbjct: 459 GEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSY 518
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C + + L+R+ G P YN L+ K V DAL L EM
Sbjct: 519 NTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFR 578
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++K T ++ GR A L +M++ G + ++ G C V++
Sbjct: 579 KDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDE 638
Query: 539 AEALL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + +K+F++ D +++ V N + G + + L + G P+ +T MI
Sbjct: 639 ALRMFEDLRSKEFEL-DVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMI 697
Query: 598 HS 599
S
Sbjct: 698 KS 699
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 204/422 (48%), Gaps = 11/422 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD-CPHSVDVFQDLISCTEDCNWAYV 181
KP S+ Y +++H A ++ L +L +++D P F LI AY
Sbjct: 337 KPNSTIYHILLHGYATKGAL-IDVRDLLDL--MIRDGIPFEHRAFNILIC-------AYA 386
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F + G +P +VS + +++ L K ++ + +M G+ PN
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+F L H C G+ KV ++ G PD + NT++ + CK+GR+ +A + ++
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 506
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD+V+Y TL++G C GK+ E+ + RMV GL PD +YN+L+ Y K G++
Sbjct: 507 IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRV 566
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +L EM + T I++ G + GR+++A L +++ G + + Y+ +
Sbjct: 567 EDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 626
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+++ A + E + + + ++ ++ +L K + +A L MV R
Sbjct: 627 LGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGP 686
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + TY +I G E+ +L M ++G DS + +++ + DV +A
Sbjct: 687 VPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGT 746
Query: 542 LL 543
L
Sbjct: 747 YL 748
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 4/365 (1%)
Query: 242 TFNILTHVFCK-NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T N L C N D ++ ++ E G+ PD+ +YN LI C + + +A L
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187
Query: 301 MYRR---NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M N P++V+Y T+++G KEG+V +A+ LFH M+ +GL PD+V+YN+LI CK
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
M ++ ++L M G+ PDT T I+++GY G+L A+ L+ ++ G+
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C+ R A S+ + + + G P+ IY+ L+ ++ D L D M+
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 367
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
I + LIC + G +A++ EM ++G+ PD +I+ C V
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVE 427
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + + S+ ++ + G+ K+ EL + G P+ + ++
Sbjct: 428 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM 487
Query: 598 HSLWK 602
+L K
Sbjct: 488 DNLCK 492
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 4/326 (1%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL-FHRMVHR 339
LI +C GRL+ AF + + + VT L+ GLC + +A + F RM
Sbjct: 97 LIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPEL 156
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY---PDTFTCQIIVQGYGKEGRL 396
G +PD+ SYN LI C E K QE+ LL M +G Y P+ + ++ G+ KEG +
Sbjct: 157 GYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEV 216
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L E+ G+ Y+ LI LC+ A ++L+ + G +P YN +
Sbjct: 217 DKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIM 276
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ C + +A+ L +M ++P + TY LI +C IGR EA S+ D M+ G
Sbjct: 277 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQ 336
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+S I +L++GY + + LL + ++ ++N + +A+ G + K M
Sbjct: 337 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 396
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G P+ ++ +IH L K
Sbjct: 397 AFTEMRQNGLRPDVVSYSTVIHILCK 422
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 175/378 (46%), Gaps = 47/378 (12%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+T F ++ + ++P +Y ++HIL + A+ ++V S + +
Sbjct: 394 AMTAFTEMRQN-GLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV--------SEGLSPN 444
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+IS T + +G ++ + + ++ G P + N +++ L K + + +
Sbjct: 445 IISFTSLIH-GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF 503
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ + IG+ P+ ++N L +C G +D+ L+++ G PD TYN+L++ Y K
Sbjct: 504 DMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKN 563
Query: 289 GRLNDAFYLYRIMYRRNV-----------------------------LPD------LVTY 313
GR+ DA LYR M+R++V + D + TY
Sbjct: 564 GRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETY 623
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
T++ GLC+ V EA ++F + + D+ +++ +I A K G++ E+KSL M+
Sbjct: 624 NTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVL 683
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G PD T ++++ + +EG L + NL + +++ G + + + ++ L +
Sbjct: 684 RGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRR 743
Query: 434 ATSLLERIGQDGYVPSLE 451
A + L +I + + SLE
Sbjct: 744 AGTYLTKIDEKNF--SLE 759
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 44/315 (13%)
Query: 329 AHQLFHRMVHRGLS-----------------------------------PDIVSYNTLIF 353
A LF+ MV G++ V+ N LI
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 354 AYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGV 411
C + ++ +++ M G PD F+ +++G E + AL L++ + G
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 412 SISRDI--YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+ S ++ Y+ +I ++ A L + G P + YN L++ LCK ++ A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ + M D+ + P TY +I +C +G+ EAV L+ +M SG+ PD +LI
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQY 314
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF--- 586
YC +A ++ +K Q ++ Y+ + + +A G L + +L +R G
Sbjct: 315 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 374
Query: 587 --APNNLTCKYMIHS 599
A N L C Y H
Sbjct: 375 HRAFNILICAYAKHG 389
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I + + + K +D G Q I + N +L GL + +C+D+ +++E++ +
Sbjct: 597 QAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVR 656
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF+I+ + K G +D+ + G PD++TY+ +I S+ ++G L ++ L+ M
Sbjct: 657 TFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSM 716
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ D ++ L ++G VR A ++ + S + S L+ E K
Sbjct: 717 EKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLE-ASTAALLIPIVSEKKY 775
Query: 362 QESKSLLYE 370
Q+ L E
Sbjct: 776 QKEVKFLPE 784
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A +KVG I E+ F + G P +++ + ++ ++ +++ ++ M + G
Sbjct: 664 ALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAA 723
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
++H NI+ + GDV + +L KI+E+ F + T LI +K
Sbjct: 724 DSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEK 773
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/541 (25%), Positives = 246/541 (45%), Gaps = 50/541 (9%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S V A+T F + D I P Y ++ L + A + E K C
Sbjct: 6 CKSRKVDKAITLFKQMV-DKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE--ARAKGCH 62
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLN 219
+V + +I K G I + + + GF+P++V+ + L++GL + +
Sbjct: 63 PTVVTYNTMID-------GLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDH 115
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVF----------------------------- 250
+D+ ++ EEM G PN T+N L +
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFG 175
Query: 251 ------CKNGDVDKVNGFLEKI--EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
CK G+++ ++++ E G PD++T+N+++ CK+ R+ DA +++
Sbjct: 176 LIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL 235
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R P++VTY+TL++GL K K+ EA QL +MV G + V+Y+T++ K G+M+
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +L +M G PD T ++ G+ K RL A+ L+ E+ G S Y L
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNI 481
LC+ R A +L+ + G P+ Y+ +++ LCK V +AL ++M D +
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + Y ALI C G+ EA ++ M+ +G +PD +LING C ++
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L A++ + D +Y + + + + +L ++ G +P+ T + MIH L
Sbjct: 476 LFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLL 535
Query: 602 K 602
+
Sbjct: 536 E 536
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 204/396 (51%), Gaps = 3/396 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+++GL K +D+ ++++M I P+ T+ L K V + E+ +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR-NVLPDLVTYTTLMNGLCKEGKVREA 329
P +VTYNT+I CK GR+ +A LY M P +VTY+TL++GLC++ +V +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+L M RG +P+ V+YNTL+ A +G+ +E+ SLL +M NG P+ T +I++G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRPFAATSLLERIGQDGYV 447
KEG + +A +V E+ +S D+ ++ ++ LC++ R A ++ +R + G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ Y+ L++ L K + +AL L +MV+ + + TY ++ +GR +AV +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ +M ++G LPD+ LI+G+ + + +A LL + +Y + +
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
G + +E+ G APN +T ++ L K
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 396
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 162/326 (49%), Gaps = 1/326 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F++ L+ G +P++V+ + L++GL K+ +D+ Q+ +M +G NT T++
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ K G ++ L ++ + G PD VTYNTLI + K+ RL +A L R M
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P +VTYTTL +GLC+ G+ EA ++ M RG +P+ ++Y++++ CK G++ E+
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403
Query: 366 SLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+M + + P ++ G K G++ A + + R G + LI
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC R L + + G VP + Y L++ LC+ V +A L +M + P
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPD 523
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDE 510
ST R +I + R +A + DE
Sbjct: 524 RSTRRTMIHGLLEVNRDEDAKRIQDE 549
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 1/295 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + E+ + K +++G + + V+ + +++GLLK+ ++ V +M G P+
Sbjct: 255 KMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAV 314
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L F K + + G L ++ E GF P +VTY TL C+ GR ++A + M
Sbjct: 315 TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 374
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RGLSPDIVSYNTLIFAYCKEGK 360
R P+ +TY+++++GLCK G+V EA F +M ++P +++Y+ LI CK GK
Sbjct: 375 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGK 434
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L M+ G PD T I++ G GR+ + L L + G Y
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYAT 494
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
L+ LC+ +R A L +++ DG P ++ L + + DA ++DE
Sbjct: 495 LVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 231/514 (44%), Gaps = 44/514 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L K+ A++++ E+ K C ++ + L+ C K
Sbjct: 42 PDVVSYSCLINSLGRAGKWEAALEVVAEMQ--AKGCKPNLWTYNTLVDC-------LGKA 92
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ + + D G P + + N L++ L K + + + ++ EM G P+T T+
Sbjct: 93 GQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTY 152
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + K G K LE++E G PD++TY++LI+ K G AF L++ M R
Sbjct: 153 NSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR 212
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R PD +T+T LM+ L K G+V +A +L M RG+ P +V+YN LI + K G + E
Sbjct: 213 RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVE 272
Query: 364 SKSLLYEMMGNGIYPDTFT-----------------CQII------------------VQ 388
+ +LL EM NG PD T CQ++ +
Sbjct: 273 AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLIN 332
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G GK G L A L ++ G + Y LI AL + R +A L E + G P
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQP 392
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
L Y ++ L K V DA L EM + + P + TY A + GR EA +
Sbjct: 393 DLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIF 452
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
++M ESG+LPD L+ G K+V+ A LL ++ +D+ ++ +
Sbjct: 453 EDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSW 512
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G++ + EL + G P + +I +L K
Sbjct: 513 GNVDEAHELLQFANSKGLWPGASSYNALIDALAK 546
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 181/365 (49%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N L + K G ++ E+++ + PD+V+Y+ LI+S + G+ A +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + P+L TY TL++ L K G+ EA +L M G PD+ +YN LI K
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ E+ +L EM G PDTFT ++ G GK GR A+ L+ E++R G
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI L +D A L + + + G P + LM++L K V DAL L DEM
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+R +KP + TY ALI F +G EA +L+DEM +G PD LI G ++
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A +L K+ DT +YN + N + G L+ L R G P+ +T +I
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366
Query: 598 HSLWK 602
+L K
Sbjct: 367 TALGK 371
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 200/462 (43%), Gaps = 35/462 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G E+ F + + P +VS + L+N L + + +V EM G P
Sbjct: 18 ALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKP 77
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L K G D+ L ++ + G PD+ TYN LIS+ K GRL++AF L+
Sbjct: 78 NLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLF 137
Query: 299 RIMYRRNVL-----------------------------------PDLVTYTTLMNGLCKE 323
M R + PD++TY++L+ GL K+
Sbjct: 138 AEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKD 197
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ +A +LF M RG PD +++ L+ A K G++ ++ LL EM G+ P T
Sbjct: 198 GETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTY 257
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+GK G L+ A NL+ E++R G Y LI L + ++ A +L+++ +
Sbjct: 258 NALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK 317
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G P YN L+ L K + DA L D M + P + TY LI R
Sbjct: 318 EGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVES 377
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L +EM G+ PD +I V+ A+ L K D +YNA N
Sbjct: 378 ACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLN 437
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
G + ++ + G P+ T ++ L K E
Sbjct: 438 SLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 187/404 (46%), Gaps = 1/404 (0%)
Query: 200 GF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GF P++V+ N LLN L K ++ ++EE+ P+ +++ L + + G +
Sbjct: 3 GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ +++ +G P+L TYNTL+ K G+ ++A L M +PD+ TY L++
Sbjct: 63 ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
L K G++ EA LF M RG PD +YN+LI+ K G+ Q++ LL EM +G P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ G GK+G + A L E++R G + L+ AL + R A LL
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P + YN L+ K + +A L DEM KP + TY LI
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+ EA ++ +M + G PD+ LING +N A L K D +Y
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + + L + +G P+ T +I L K
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 184/381 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + ++ + + + G +P +V+ N L+ G K+ + + + + +EM R G P
Sbjct: 228 ALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ L K +D+ L+K+E+EG PD +TYNTLI+ K G LNDA L+
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLF 347
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD+VTY+TL+ L K +V A LF M G+ PD+ +Y ++I K
Sbjct: 348 DRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKA 407
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ ++ L EM G G+ PD T + G+ GR A + +++ G+ Y
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D L++ L + A LL+ + + G ++E +E L +V +A L
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANS 527
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P S+Y ALI GR EA + ++++ E G PD LI+ ++
Sbjct: 528 KGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDT 587
Query: 539 AEALLGFFAKKFQIYDTESYN 559
A LL +K+ SY+
Sbjct: 588 AFELLEEMSKRGLKLSPRSYS 608
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 10/357 (2%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D V A + +K + KP Y ++ L ++ A ++L ++ + + CP
Sbjct: 268 GDLVEAYNLLDEMKRN-GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEK--EGCPPDT 324
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ LI+ K GL+ ++ + F + G P +V+ + L+ L K ++
Sbjct: 325 ITYNTLIN-------GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVES 377
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++EEM +GI P+ T+ + V K G VD + ++ +G PD++TYN ++
Sbjct: 378 ACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLN 437
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
S + GR +A ++ M +LPD+ TY L+ GL K +V +A L ++ +G +
Sbjct: 438 SLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAF 497
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D + ++ + G + E+ LL G++P + ++ K GR+ A N +
Sbjct: 498 DSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTL 557
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L+ G Y LI AL Q + A LLE + + G S Y+ L+ L
Sbjct: 558 EDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ AL + + A L E + + P + Y+ L+ SL + AL + EM
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ KP+L TY L+ C G+ EA+ L+ EM ++G +PD + LI+ ++
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A L ++ + DT +YN++ + G K MEL + R G P+ +T +I
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 598 HSLWKGME 605
L K E
Sbjct: 192 TGLGKDGE 199
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/608 (24%), Positives = 257/608 (42%), Gaps = 94/608 (15%)
Query: 86 LLPHLGAHEISRVL--LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
LLPHL + ++ + +++ ++ L FF + N + + T +YC ++ +L +
Sbjct: 67 LLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIP 126
Query: 144 FAMKMLCELVE-------LVKDCPHS--VDVFQDLISCTEDCNWAYVKVGLIRESFKTFR 194
A +L L++ L + H + L S W LI FR
Sbjct: 127 PARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFR 186
Query: 195 K-----TLDV-------GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+DV G PS+ +CNFLL+ L+K N ++C +V+ M G CP+ +
Sbjct: 187 NLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFS 245
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F + + CK G ++ K+E+ G P++VTYN +I+ C+ GRL++AF L M
Sbjct: 246 FTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT 305
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ V P+L TY L+NGL K + + + M+ G +P++V +N LI YCK G ++
Sbjct: 306 VKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIE 365
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD------ 416
+ + M+ I P + T ++QG+ K ++ A N + E+ G+SI D
Sbjct: 366 GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVV 425
Query: 417 -----------------------------IYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ L+ LC+D + AT L R+ + G
Sbjct: 426 HWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP 485
Query: 448 PSLEIYNELMESLCKCDSVADA-----------------------------------LLL 472
S N L+ LC + +A L
Sbjct: 486 ASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRL 545
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++EM R I+P + TY L+ C +G+ +A+ L DE SG++ + +++ GYC
Sbjct: 546 REEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCK 605
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ E L K ++ YN + ++G+++ ++L + G PN T
Sbjct: 606 ANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 665
Query: 593 CKYMIHSL 600
+IH +
Sbjct: 666 YSSLIHGV 673
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 229/550 (41%), Gaps = 79/550 (14%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L I P Y I++ L N + A ++ ++ VK ++ + LI+
Sbjct: 272 LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT--VKGVQPNLKTYGALIN-------G 322
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+K+ + + + GF P++V N L++G K+ I+ ++ + M I P
Sbjct: 323 LIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 382
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ T L FCK+ ++ LE+I G +++ CKK R + AF +
Sbjct: 383 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 442
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR------------------------ 335
+M RN P + T L+ GLCK+GK EA +L+ R
Sbjct: 443 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 502
Query: 336 -----------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT-- 382
M+ RGL D ++YN LI +C EGK++ L EM GI PD +T
Sbjct: 503 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 562
Query: 383 ------CQ---------------------------IIVQGYGKEGRLLSALNLVVELQRF 409
C I+++GY K R+ NL EL
Sbjct: 563 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 622
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+ ++ +Y+ +I A CQ+ AA LLE + G +P+ Y+ L+ +C V DA
Sbjct: 623 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 682
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L DEM P++ Y ALI +C +G+ A S EM+ + P+ V+I+G
Sbjct: 683 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 742
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
YC ++ KA LL + + D +YN + N F + D+ ++ + G +
Sbjct: 743 YCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVD 802
Query: 590 NLTCKYMIHS 599
+T ++H
Sbjct: 803 EITYTTLVHG 812
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 164/344 (47%), Gaps = 2/344 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + + L+ G S V+ N L++GL + + ++ +EM G+ + T+N L
Sbjct: 471 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 530
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FC G V+ E++ + G PD+ TYN L+ C G+L+DA L+ ++
Sbjct: 531 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 590
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
++ TY +M G CK ++ + LF+ ++ + + + + YN +I A+C+ G + + L
Sbjct: 591 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 650
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L M GI P+ T ++ G G + A +L+ E+++ G + Y LI C+
Sbjct: 651 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 710
Query: 428 -DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
A ++ LE I + + P+ Y +++ CK ++ A L +M + I P +
Sbjct: 711 LGQMDTAESTWLEMISFNIH-PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 769
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
TY L FC A + D+M G+ D L++G+
Sbjct: 770 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K I + F + L + + + N ++ + + Q+ E M GI P
Sbjct: 602 GYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILP 661
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L H C G V+ ++++ +EGF P++V Y LI YCK G+++ A +
Sbjct: 662 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 721
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M N+ P+ TYT +++G CK G + +A+ L +M G+ PD+V+YN L +CK
Sbjct: 722 LEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKA 781
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
M + + +M G+ D T +V G+
Sbjct: 782 NDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 207/436 (47%), Gaps = 25/436 (5%)
Query: 112 FFNWVK--NDLEIKPTSSNYCLIVHILAWNNKFSFAMKML----------------CELV 153
FF W+ + + T +YC ++H L + A ++ ++
Sbjct: 1 FFTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAIL 60
Query: 154 ELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
E + VF LI+ AY++ G +R++ + +R T + F +C +L
Sbjct: 61 ETQGTQRSDIYVFSGLIT-------AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLE 113
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
L+KL W Y+E+ G + + FNIL H FCK GD+ + I + G P
Sbjct: 114 HLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRP 173
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+V++NTL++ Y + G L++ F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF
Sbjct: 174 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 233
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M+ +GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+
Sbjct: 234 DEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKK 293
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L A +L+ E++ G+ + Y LI C++ A +R+ Q+ Y
Sbjct: 294 GDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 353
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L+ LC+ DA + EM+ ++P TY +I FC G L+ EM
Sbjct: 354 TALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQR 413
Query: 514 SGMLPDSQICRVLING 529
G +P VL+NG
Sbjct: 414 DGHVPSVVTYNVLMNG 429
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 36/358 (10%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N++ V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 38 NLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTR 97
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
T ++ L K + + ++ G + +N L+ +CKEG ++
Sbjct: 98 EHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIR 157
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ S+ + G+ P + ++ GY + G L L + GV
Sbjct: 158 VALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ---------- 207
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
P + Y+ L+ LCK + DA L DEM+D+ +
Sbjct: 208 -------------------------PDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 242
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P+ T+ LI C GR A+ + +ML + PD LI G C + D+ +A+ L
Sbjct: 243 PNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDL 302
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ K D SY + + ++GDL E +KR ++ +++ +I L
Sbjct: 303 IDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 360
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 17 LHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIYVFSGL 76
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 77 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEILECGY 136
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A S+ + I + G PS+ +N LM + + +
Sbjct: 137 PASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 196
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + +A L DEML+ G++P+ LI+G+C
Sbjct: 197 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHC 256
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + +L G P+ +
Sbjct: 257 KNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKI 316
Query: 592 TCKYMI 597
+ +I
Sbjct: 317 SYTTLI 322
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM CK + AL + D + ++PS+ ++ L+ + +G E
Sbjct: 135 GYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 194
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 195 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDG 254
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 255 HCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCK 292
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 207/412 (50%), Gaps = 6/412 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+VG + E+F + + G QPS + L+ L ID+ + +++EM G PN H
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L C++G +++ NG K+ ++ P ++TYN LI+ YCK GR+ AF L +M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R P++ T+ LM GLC+ GK +A L RM+ GLSPDIVSYN LI C+EG M
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL M I PD T I+ + K+G+ A + + R G+S+ L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I +C+ + A +LE + + + + N +++ L K V + L + ++ +
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 482 KPSLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
PS+ TY L+ G+ RSG+ + +++ M SG LP+ ++ING C V +
Sbjct: 578 VPSVVTYTTLV---DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
AE LL + +Y + + +G L + +E + + G+ N+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 250/541 (46%), Gaps = 24/541 (4%)
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWV--KNDLEIKPTSSNYCLIVHILAW 138
+ LK L+ H+ + S+V+ +SD+ + FF WV + PT N L + + +
Sbjct: 58 SSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSG 117
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY----------------VK 182
+ + A+ +V L+K+C L+ C ++ + K
Sbjct: 118 LYRVAHAV-----IVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAK 172
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ L ++ T+R+ GF ++ ++N L K + ++ +IG ++H
Sbjct: 173 LDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHI 232
Query: 243 FNILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
L FC+ ++ D + F +E P+ V+Y+ LI C+ GRL +AF L M
Sbjct: 233 GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P TYT L+ LC G + +A LF M+ RG P++ +Y LI C++GK+
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ + +M+ + I+P T ++ GY K+GR++ A L+ +++ + ++ L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ +P+ A LL+R+ +G P + YN L++ LC+ + A L M +I
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P T+ A+I FC G++ A + + ML G+ D LI+G C A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K + S N + +M ++ + + + + + +LG P+ +T ++ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 602 K 602
+
Sbjct: 593 R 593
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 196/419 (46%), Gaps = 10/419 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P++ Y +++ L A + E++ + C +V + LI +
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP--RGCKPNVHTYTVLID-------GLCR 348
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I E+ RK + PS+++ N L+NG K + +++ M + PN T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN L C+ G K L+++ + G PD+V+YN LI C++G +N A+ L M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++ PD +T+T ++N CK+GK A M+ +G+S D V+ TLI CK GK +
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +L ++ I + +I+ K ++ L ++ ++ + G+ S Y L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
L + + +LE + G +P++ Y ++ LC+ V +A L M D +
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM-EKDVNKAE 540
P+ TY ++ + G+ A+ + M+E G + +I L+ G+ + +K ++ +E
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 192/463 (41%), Gaps = 64/463 (13%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ C +V F +L+ +VG ++ ++ LD G P IVS N L++GL
Sbjct: 400 RACKPNVRTFNELME-------GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ ++ +++ M I P+ TF + + FCK G D + FL + +G D V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVL----------------------------- 307
T TLI CK G+ DA ++ + + +L
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 308 ------PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P +VTYTTL++GL + G + + ++ M G P++ Y +I C+ G++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ LL M +G+ P+ T ++V+GY G+L AL V + G ++ IY L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 422 I--VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+ L Q + S + I P E NEL+ + + L +
Sbjct: 693 LQGFVLSQKGIDNSEESTVSDIALRETDP--ECINELISVVEQLGGCISGLCI------- 743
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L+ C GR+ E+ L+ +LE G+ + + +++ YC +K K
Sbjct: 744 ----------FLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKC 792
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L+ K + +S+ V ++GD + EL L
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 35/357 (9%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
PHS++V D++S + C ++E K +G PS+V+ L++GL++
Sbjct: 546 PHSLNVILDMLS--KGCK--------VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
I +++ E M G PN + + I+ + C+ G V++ L +++ G P+ VTY
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG--LCKEGKVREAHQLFHRMV 337
++ Y G+L+ A R M R + Y++L+ G L ++G +
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
R P+ + N LI + E +G I + C +V KEGR
Sbjct: 716 LRETDPECI--NELIS--------------VVEQLGGCI---SGLCIFLVTRLCKEGRTD 756
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+ +LV + GV + + + D ++ + C + L+ + + G+VPS + + ++
Sbjct: 757 ESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVI 815
Query: 458 ESLCKCDSVADALLLKDEMVDRN---IKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L K A L E++ N K + TY + G E + L+D++
Sbjct: 816 QGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 7/365 (1%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI+ AY++ G +R++ + +R T + F +C +L L+KL
Sbjct: 55 VFSGLIA-------AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLV 107
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+YNTL++
Sbjct: 108 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG 167
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+
Sbjct: 168 YIRXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPN 227
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L A +L+
Sbjct: 228 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLID 287
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+ G+ + Y LI C++ +A +R+ Q+ Y L+ C+
Sbjct: 288 EMSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEG 347
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
DA + EM+ +KP TY +I FC G L+ EM G +P
Sbjct: 348 RSVDAEKMLREMLSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYN 407
Query: 525 VLING 529
VL+NG
Sbjct: 408 VLMNG 412
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 36/336 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 26 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIAAYLESGFLRDAIECYRLTREHKFW 85
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CK+G ++ ++S+
Sbjct: 86 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 145
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV
Sbjct: 146 FDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQ--------------- 190
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+ + + P+ T
Sbjct: 191 --------------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A L+ +
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 290
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
K D +Y + N ++GDL E +KR ++
Sbjct: 291 VKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQ 326
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 18/306 (5%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTLIF 353
+Y T+++ LC + EA L +V R DI ++ LI
Sbjct: 2 SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 62 AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
S ++ L+ C+D A S+ + I + G PS+ YN LM + + + LK
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
M+ ++P + TY LI C + +A L DEML G++P+ LI+G+C
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
V+ A + + D +YN + + GDL + L G P+ +T
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITY 301
Query: 594 KYMIHS 599
+I+
Sbjct: 302 TTLING 307
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ +
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRX 171
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + + ++
Sbjct: 172 GDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 275
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 232/497 (46%), Gaps = 11/497 (2%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
Q D SAL F+ + N+ I P + Y +I+ N A ++ ++ KD +
Sbjct: 342 QGDLDSALELFDKM-NENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN--KDISPT 398
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
V LI Y+K E+ K F + + G ++ + N LL+ L K +
Sbjct: 399 VFNVNSLIR-------GYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMS 450
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++E+M R G+ P+ ++N + C+ GD+D NG ++ E+G P+L+TY+ L+
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLM 510
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
Y KKG AF LY M N+ P T ++NGLCK G+ E+ ++V G
Sbjct: 511 DGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFI 570
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P ++YN +I + KEG + + ++ EM G+ P+ FT ++ G+ K + AL +
Sbjct: 571 PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKV 630
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E++ G+ + +Y LI C+ A+ LL + + G P+ +Y+ ++ K
Sbjct: 631 MDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRK 690
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
++ AL L M++ I L Y LI G+ A L EML G++PD
Sbjct: 691 LQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLIT 750
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
VLI+G C + + A+ +L +K YN + ++G+L + L L
Sbjct: 751 YSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEML 810
Query: 583 RLGFAPNNLTCKYMIHS 599
G P++ T +++
Sbjct: 811 DKGLVPDDTTYDILVNG 827
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 191/390 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + K + G +PS+VS N ++ G + +D V+ EM G+ PN
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+++L + K GD + G +++ E P T N +I+ CK GR +++ + +
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ +P +TY +++G KEG V A ++ M G+SP++ +Y LI +CK M
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++ EM GI D ++ G+ ++G +++A L+ ELQ G+S ++ +Y +
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + AA L +R+ +G L+IY L+ L K + A L EM+ + I
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P L TY LI C G+ A ++++M M P I LI G+ E ++ +A
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L K + D +Y+ + N +DG+L
Sbjct: 805 LHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/632 (22%), Positives = 268/632 (42%), Gaps = 65/632 (10%)
Query: 22 SSFSSASSSYSLQIIQD----SEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKG-DSHL 76
S SS+ ++L+ I+ S L N + P +QNP+ + S DS L
Sbjct: 3 SPISSSIPHFTLRSIKSPKTLSSQPELPNIPISETPLSQNPHPNTNFPGKSAPTSQDSFL 62
Query: 77 TLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHIL 136
T Q + LL H Q+D SAL++F W + + C+++HIL
Sbjct: 63 TQTQY-IDTLLNH-------------QNDPQSALSYFTWASQKRGLIKSVDALCVLLHIL 108
Query: 137 AWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW------------AYVKVG 184
+ + + L P V LI + ++ +YVK
Sbjct: 109 TKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTK 168
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
I ++ F ++ P + N L+ L+K N I + VY +M G+ + T +
Sbjct: 169 RINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATIS 228
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
++ + G +++ G+ + + +G + D Y+ +I + CKK A L R M +
Sbjct: 229 VMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDK 288
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+P V +T ++ K+GK+ EA ++ M+ G ++V TL+ YCK+G + +
Sbjct: 289 GWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSA 348
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR---------------- 408
L +M NGI P+ T +I++ K G + A + +++
Sbjct: 349 LELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRG 408
Query: 409 -------------FGVSISRDI-----YDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
F +++ I Y+ L+ LC++ + A S+ E++ + G PS+
Sbjct: 409 YLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSV 468
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN ++ C+ + A + EM+++ +KP+L TY L+ + G + A L D
Sbjct: 469 VSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDR 528
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M + P C ++ING C ++++ L ++ I +YN + + F ++G
Sbjct: 529 MRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGS 588
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + + ++G +PN T +I+ K
Sbjct: 589 VNSALAVYTEMCKIGVSPNVFTYTNLINGFCK 620
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 195/429 (45%), Gaps = 36/429 (8%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
R+ D G+ P V ++ +K + + +V EM G N L +CK
Sbjct: 282 LREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCK 341
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD+D +K+ E G P+ VTY +I CK G ++ A+ +Y M +++ P +
Sbjct: 342 QGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFN 401
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+L+ G K EA +LF V G++ ++ +YN+L+ CKEGKM E+ S+ +M+
Sbjct: 402 VNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMV 460
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV-------SISRDIY------- 418
G+ P + ++ G+ ++G + SA + VE+ G+ S+ D Y
Sbjct: 461 RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTE 520
Query: 419 ---------------------DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+ +I LC+ R + L+++ Q+G++P+ YN ++
Sbjct: 521 YAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCII 580
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ K SV AL + EM + P++ TY LI FC A+ +MDEM G+
Sbjct: 581 DGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIE 640
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
D + LI+G+C + D+ A LL + + Y+++ + F + ++ + L
Sbjct: 641 LDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHL 700
Query: 578 QKRFLRLGF 586
KR + G
Sbjct: 701 HKRMINEGI 709
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 135/258 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+VK G + + + + +G P++ + L+NG K N +D +V +EM GI
Sbjct: 582 GFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIEL 641
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + L FC+ GD+ + L +++E G P+ V Y+++IS + K + A +L+
Sbjct: 642 DVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLH 701
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + DL YTTL++GL KEGK+ A +L+ M+ +G+ PD+++Y+ LI C +
Sbjct: 702 KRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNK 761
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++ ++ +L +M + P F ++ G+ KEG L A L E+ G+ Y
Sbjct: 762 GQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTY 821
Query: 419 DYLIVALCQDNRPFAATS 436
D L+ +D F+ S
Sbjct: 822 DILVNGKVKDGNLFSGAS 839
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 205/401 (51%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N +++G K +++ +++EM + GI P+ T+N + H CK +DK F
Sbjct: 220 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 279
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ + P+ TYN LI Y G+ +A +++ M R ++LPD+VT + LM LCK
Sbjct: 280 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SYN ++ Y +G + + L M+G+GI PD +T
Sbjct: 340 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 399
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P YN L++ C S+ A L E+++ + + + ++I C +GR
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ PD+ + +L++GYC+ + KA + + Y +
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEA 620
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 170/352 (48%), Gaps = 35/352 (9%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y G +E+ + F++ P +V+ + L+ L K I + V++ M G
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 359
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ ++NI+ + + G + + + + +G PD T+N LI +Y G L+ A +
Sbjct: 360 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 419
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M V PD+VTY T++ LC+ GK+ +A + F++M+ +G++PD +YN LI +C
Sbjct: 420 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 479
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++K L+ E+M NG++ D I+ K GR++ A N I
Sbjct: 480 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN---------------I 524
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+D + G P +YN LM+ C + AL + D MV
Sbjct: 525 FDLTV--------------------NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
I+P++ Y L+ +C IGR E +SL EML+ G+ P + + ++I+G
Sbjct: 565 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 193/404 (47%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ N N L FC+ D+ ++ L + E G PD+ +Y+ L+ S C
Sbjct: 137 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 196
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + P++V Y T+++G KEG V +A LF MV RG+ PD
Sbjct: 197 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 256
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YN+++ A CK M ++++ L +M+ + P+ +T ++ GY G+ A+ +
Sbjct: 257 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 316
Query: 405 ELQRFG--------------------VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R + +RD++D + + Q+ F+
Sbjct: 317 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATK 375
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P +N L+++ C + A+++ +EM D +KP + TY
Sbjct: 376 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 435
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
R +I C IG+ +A+ ++M++ G+ PD LI G+C + KA+ L+
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D ++++ N + L ++M+ Q F + +G P+
Sbjct: 496 NGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 536
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 181/366 (49%), Gaps = 2/366 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G++ ++ F + D G +P +V+ ++ L ++ +D + + +M G+ P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + +N L FC +G + K + +I G D+V ++++I++ CK GR+ DA ++
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD V Y LM+G C GK+ +A ++F MV G+ P++V Y TL+ YCK
Sbjct: 526 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 585
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E SL EM+ GI P T II+ G + GR + A E+ G+++ Y
Sbjct: 586 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTY 645
Query: 419 DYLIVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ ++ L + NR F A L + + ++ N +++ + + V +A L +
Sbjct: 646 NIVLRGLFK-NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 704
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ PS+ TY +I G EA + M +G P+S++ ++ + ++
Sbjct: 705 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 764
Query: 538 KAEALL 543
+A A L
Sbjct: 765 RAGAYL 770
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 176/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S N +LNG C+ +++ M GI P+ +
Sbjct: 339 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 398
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G PD+VTY T+I++ C+ G+++DA + M
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V PD +V +++++N LCK G+V
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL PD V YN L+ YC GKM+++ + M+ GI P+ +
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y +I L + R A + + G
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ L K +A+ L E+ N+K ++ T +I R EA
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + S ++P ++I E V +AE
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 732
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 175/402 (43%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FN ++ D +KP Y ++ L K AM+ ++++ + +
Sbjct: 416 AMIIFNEMR-DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID--QGVAPDKYAYNC 472
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI CT G + ++ + + ++ G IV + ++N L KL +
Sbjct: 473 LIQGFCTH---------GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P+ +N+L +C G ++K + + G +P++V Y TL++ YC
Sbjct: 524 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 583
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M +R + P + Y+ +++GL + G+ A FH M G++ DI
Sbjct: 584 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDIC 643
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN ++ K E+ L E+ + + T ++ G + R+ A +L +
Sbjct: 644 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 703
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R + S Y +I L ++ A + + G P+ + N ++ L K + +
Sbjct: 704 SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 763
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 764 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 38/332 (11%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + +++ L+ G C+ + EA
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SY+ L+ + C +GK ++ LL M G P+ ++
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIP----------------------------------- 254
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN ++ +LCK ++ A +MV++ + P+ TY LI + G+ EAV +
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EM +LPD +L+ C + +A + A K Q D SYN + N +A
Sbjct: 315 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 374
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G L + +L L G AP+ T +I +
Sbjct: 375 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 406
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 216/451 (47%), Gaps = 40/451 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L + A +L E+ L+ C V+ F D++ +
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEM--LLMGCAADVNTFDDVVR-------GMCGL 242
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC------------------- 224
G +RE+ + + + G P +++ FLL GL ++ D+
Sbjct: 243 GRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVI 302
Query: 225 ------------WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
++YE MG G P+ HT++IL H CK G + L ++E++GF
Sbjct: 303 GGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFA 362
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++VTY ++ S+CK G +D L M + + + Y ++ LCK+G++ EA L
Sbjct: 363 PNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGL 422
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G +PDI SYNT+I+ C +M+E++ + ++ G+ + T I+ +
Sbjct: 423 IQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLR 482
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+GR A+ L E+ G S+ Y+ LI A+C+D + LLE + + G P+
Sbjct: 483 DGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVS 542
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK V DAL L +M+++ + P + TY LI C +G A++L++++
Sbjct: 543 YNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLH 602
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ PD +LI+ +C + ++ A LL
Sbjct: 603 NENVHPDIITYNILISWHCKVRLLDDAAMLL 633
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 171/331 (51%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + + G QP + + L++GL KL I ++ EM + G PN T+
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 368
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
I+ H FCKNG D LE++ +G + YN +I + CK GR+++A L + M
Sbjct: 369 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ +Y T++ LC ++ EA +F ++ G+ + ++YNT+I A ++G+ Q+
Sbjct: 429 QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQD 488
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ +G D + +++ K+G + +L L+ E+ G+ + Y+ LI
Sbjct: 489 AVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 548
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC++ R A L +++ G P + YN L+ LCK + AL L +++ + N+ P
Sbjct: 549 ELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP 608
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ TY LI C + +A L++ + +
Sbjct: 609 DIITYNILISWHCKVRLLDDAAMLLNRAMAA 639
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 199/452 (44%), Gaps = 33/452 (7%)
Query: 184 GLIR-ESFKTFRKTLDVG-FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
GL R F +R+ + P+ + L +L D+ + M R G P+
Sbjct: 136 GLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAV 195
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + H C G V + L ++ G D+ T++ ++ C GR+ +A L M
Sbjct: 196 LYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRM 255
Query: 302 YRRNVLPDLVTYTTLMNGLCK-------------------------------EGKVREAH 330
+ +P ++TY L+ GLC+ EGK+ EA
Sbjct: 256 MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEAT 315
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L+ M +G PD +Y+ L+ CK G++ + LL EM G P+ T I++ +
Sbjct: 316 ELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSF 375
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G L+ E+ G++++ Y+ +I ALC+D R A L++ + G P +
Sbjct: 376 CKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDI 435
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN ++ LC + + +A + + +++ + + TY +I GR +AV L E
Sbjct: 436 CSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKE 495
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ G D LI C + +V+++ LL A+K + SYN + + ++
Sbjct: 496 MILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERR 555
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +EL K+ L G AP+ +T +I+ L K
Sbjct: 556 VRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++ G +++ + ++ + G +VS N L+ + K +D+ + EEM GI P
Sbjct: 479 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 538
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++NIL CK V +++ +G PD+VTYNTLI+ CK G ++ A L
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 598
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
++ NV PD++TY L++ CK + +A L +R +
Sbjct: 599 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 637
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 232/504 (46%), Gaps = 25/504 (4%)
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCL--IVHILAWNNKFSFAMKMLCELVE--------- 154
V AL F WV ++P + L H+L + +A +L L +
Sbjct: 32 GVLALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLF 91
Query: 155 -LVKD----CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
++ D C + VF LI Y++ G++ + TF L GF+PS+ +CN
Sbjct: 92 GVLMDTYPLCSSNPAVFDLLIR-------VYLRQGMVGHAVNTFSSMLIRGFKPSVYTCN 144
Query: 210 FLLNGLLKLNCIDQ-CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
++ ++K NC W +++M +CPN +FNIL V C G + K L +E
Sbjct: 145 MIMASMVK-NCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMER 203
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P +V+YNTL+S CKKGR A L M + + D+ TY ++ LC+ + +
Sbjct: 204 NGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQ 263
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+ + +M ++ ++P+ VSYNTLI + KEGK+ + + EM+ + P+ T I++
Sbjct: 264 GYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY G AL L+ ++ V + L+ L + + A ++LER +
Sbjct: 324 GYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSL 383
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + +++ LC+ + +A L EM + P + T+ LI FC +G +A +M
Sbjct: 384 NCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVM 443
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
++ G +P++ I LI C +V + Q D + N++ E+
Sbjct: 444 SKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCEN 503
Query: 569 GDLSKLMELQKRFLRLGFAPNNLT 592
G L + E R+G PN++T
Sbjct: 504 GKLVEAEEFLHHISRIGLVPNSVT 527
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 178/397 (44%), Gaps = 35/397 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
+ + +K + P+ VS N L+NG +K I +V+ EM + + PN T+NIL
Sbjct: 263 QGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILI 322
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL-------------------------- 281
+ +C NG+ ++ L+ +E P+ VT TL
Sbjct: 323 NGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTS 382
Query: 282 ---------ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
I C+ G L++AF L M + V PD++T++ L+NG CK G + +A ++
Sbjct: 383 LNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEV 442
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
++ G P+ V ++TLI+ CK G + E M NG D FTC +V +
Sbjct: 443 MSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCE 502
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G+L+ A + + R G+ + +D +I A S+ +++ G+ PS
Sbjct: 503 NGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFT 562
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y L++ LCK + +A L ++ + +Y LI G EAV L +EM+
Sbjct: 563 YGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMI 622
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
++ +LPDS +++G E + A LG +K
Sbjct: 623 QNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQK 659
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/548 (23%), Positives = 244/548 (44%), Gaps = 17/548 (3%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPH-LGAHEISRVLLRCQSDSVSALTFFNWVK 117
N +D +C + + +L L + K + P+ + + + ++ V+ F +
Sbjct: 249 NMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI- 307
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+L + P Y ++++ N F A+++L +++E P+ V + L +
Sbjct: 308 -ELNLSPNLITYNILINGYCINGNFEEALRLL-DVMEANDVRPNEVTIGTLLNGLYKSAK 365
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ + I E + R +L+ +S +++GL + +D+ +Q+ EM + G+
Sbjct: 366 FDVARN--ILERYSINRTSLNC------ISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVY 417
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ TF++L + FCK G+++K + KI EGF P+ V ++TLI + CK G + +
Sbjct: 418 PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKF 477
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y M D T +L+ LC+ GK+ EA + H + GL P+ V+++ +I Y
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + S+ +M+ G +P FT +++ K A L+ +L +++
Sbjct: 538 VGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LIV + + A L E + Q+ +P Y ++ L + + A + ++
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLM 657
Query: 478 DRNIKPSLS-TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ I S Y I G+S A+ L EM E G+ D + +GY V
Sbjct: 658 QKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKV 717
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A +L+ K I + ++N + + ++ D+ +L R GF PN LT
Sbjct: 718 FSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLT---- 773
Query: 597 IHSLWKGM 604
HSL G+
Sbjct: 774 YHSLILGL 781
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 191/439 (43%), Gaps = 12/439 (2%)
Query: 171 SCTEDCNW-AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ-CWQVY 228
S T DC Y VG +F F K + G PS F LLK+ C Q W+
Sbjct: 525 SVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPS----PFTYGSLLKVLCKGQNFWEAR 580
Query: 229 EEMGRIGICP---NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + ++ P +T ++N L K+G++ + E++ + PD TY ++S
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640
Query: 286 CKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
++GRL AF +L R+M + + + + YT ++GL K G+ + A LF M +GLS D
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+++ N++ Y + GK+ + SL+ + + P+ T I++ GY + ++S L
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYN 760
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKC 463
++R G +R Y LI+ LC +L+ I + + L +N L+ C+
Sbjct: 761 LMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLT-FNMLIRKCCEI 819
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ + + L M + T +A+ S M EML+ G +P S+
Sbjct: 820 NDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQY 879
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
++ C D+ A L D + A+ A G + + M + +R LR
Sbjct: 880 CTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLR 939
Query: 584 LGFAPNNLTCKYMIHSLWK 602
+ P T ++H K
Sbjct: 940 MKKIPTTSTFTTLMHVFCK 958
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 172/408 (42%), Gaps = 76/408 (18%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N F++L V+ + G V + GF P + T N +++S K R + + +
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M V P++ ++ L++ LC +GK+++A + M G P IVSYNTL+ CK+
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ + + L++ M GI D T Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCT-----------------------------------Y 248
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ I +LC+++R +L+++ P+ YN L+ K + A + +EM++
Sbjct: 249 NMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIE 308
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
N+ P+L TY LI +C G EA+ L+D M + + P+ L+NG +
Sbjct: 309 LNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDV 368
Query: 539 AEALL-------------------------GFFAKKFQIY----------DTESYNAVFN 563
A +L G + FQ+ D +++ + N
Sbjct: 369 ARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLIN 428
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH------SLWKGME 605
F + G+L+K E+ + R GF PNN+ +I+ ++++GM+
Sbjct: 429 GFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMK 476
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 152/362 (41%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F++ + G +++ N + +G ++ + + + + PN
Sbjct: 678 KAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLT 737
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL H + + D+ + GF P+ +TY++LI C G L + ++
Sbjct: 738 TFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMF 797
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ D +T+ L+ C+ + + L H M +S D + + +
Sbjct: 798 IAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVS 857
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q ++EM+ G P + +++ + G + A L ++ G+S+ +
Sbjct: 858 QNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAM 917
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L + A +L+R+ + +P+ + LM CK D+ +A LK M +
Sbjct: 918 VRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRV 977
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
K + Y LI C G A+ +E+ + G+LP+ RVL++ + V++ E
Sbjct: 978 KLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI 1037
Query: 542 LL 543
+L
Sbjct: 1038 VL 1039
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 142/338 (42%), Gaps = 35/338 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y ++G + + KT + P++ + N LL+G + I C+++Y M R G P
Sbjct: 710 GYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFP 769
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL- 297
N T++ L C +G ++ L+ E D +T+N LI C+ L+ L
Sbjct: 770 NRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLT 829
Query: 298 -----YRI-----------------------------MYRRNVLPDLVTYTTLMNGLCKE 323
+R+ M ++ +P Y T+M +C+
Sbjct: 830 HNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRV 889
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G ++ A +L +MV G+S D + ++ GK++E+ +L M+ P T T
Sbjct: 890 GDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTF 949
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ + K+ A NL + ++ + V + Y+ LI A C + A E I Q
Sbjct: 950 TTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQ 1009
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
G +P++ Y L+ ++ V+ ++ ++ DR +
Sbjct: 1010 KGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGL 1047
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 188/362 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I +SF + + GF P++V L++G K I++ ++ EMG+ G+ N
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L H KNG + EK++E G P+L TYN +++ CK GR DAF ++ M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V ++VTY TL+ GLC+E K EA+++ +M G++P++++YNTLI +C K+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKL 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ SL ++ G+ P T I+V G+ K+G A +V E++ G+ S+ Y L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTIL 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + + A L + + G P + Y+ L+ C + +A L MV++
Sbjct: 415 IDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKF 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ Y ++ +C G S A+ L EM E + P+ R +I C E+ +AE
Sbjct: 475 EPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEG 534
Query: 542 LL 543
L+
Sbjct: 535 LV 536
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 209/447 (46%), Gaps = 36/447 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+ + S F + +D GF P N LL ++ + +Q W + E +I +
Sbjct: 103 AYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVL 161
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA---- 294
+ ++F I+ C+ G+++K L ++ E GF P++V Y TLI CKKG + A
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 295 -------------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F +Y M V P+L TY +MN LCK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ ++A ++F M RG+S +IV+YNTLI C+E K E+ ++ +M +GI P+ T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ +L AL+L +L+ G+S S Y+ L+ C+ A +++ + +
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PS Y L+++ + D++ A+ L+ M + + P + TY LI FC GR E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNE 461
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L M+E P+ I ++ GYC E +A L +K + SY +
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ ++ + L ++ + G P++
Sbjct: 522 VLCKERKSKEAEGLVEKMIDSGIGPSD 548
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 138/273 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +++FK F + + G +IV+ N L+ GL + ++ +V ++M GI PN
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FC + K ++ G P LVTYN L+S +CKKG + A + + M
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P VTYT L++ + + +A QL M GL+PD+ +Y+ LI +C +G+M
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L M+ P+ +V GY KEG AL L E++ + + Y Y+
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
I LC++ + A L+E++ G PS I N
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN 552
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++++ N L++G + + + + ++ G+ P+ T+NIL FCK GD
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++++EE G P VTY LI ++ + + A L M + PD+ TY+ L++G
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHG 452
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C +G++ EA +LF MV + P+ V YNT++ YCKEG + L EM + P+
Sbjct: 453 FCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN 512
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ + +++ KE + A LV ++ G+ S I + + A
Sbjct: 513 VASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 216/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S AM ++ +V K C DL++ N K
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMV--AKGCQ------PDLVTYGVVVN-GLCK 233
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +F K +P ++ N +++GL K +D +++EM GI PN T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E +PD+ T++ LI ++ K+G+L +A LY M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ P +VTY++L+NG C ++ EA Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E + EM G+ +T T I++QG + G A + E+ GV + Y+ L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC++ + A + E + + P++ YN ++E +CK V D L + + +K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + Y +I FC G EA +L EM E G LP+S LI + D + L
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ D + V NM DG L K
Sbjct: 594 IKEMRSCGFAGDASTIGLVTNML-HDGRLDK 623
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 199/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D + E+M +GI N +T++IL + FC+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P++VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y ++ CK G + +LL +M + P
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P + ++ L+++ K + +A L DEMV R+I PS+ TY +LI FC R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ PD LI G+C K V + + +++ + +T +YN +
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD E+ K + G PN +T ++ L K
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 203/416 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP +V+ ++NGL K D + + +M + + P +N +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK +D +++E +G P++VTY++LIS C GR +DA L M R +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T++ L++ KEGK+ EA +L+ MV R + P IV+Y++LI +C ++ E+K +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ + + E+ + G+ + Y+ LI L Q
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + DG P++ YN L++ LCK + A+++ + + ++P++ T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ PD +I+G+C + +A+AL
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ YN + DGD EL K GFA + T + + L G
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
NGL +L +D ++ EM + P+ F+ L K D V E+++ G
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ TY+ LI+ +C++ +L A + M + P++VT ++L+NG C ++ EA L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M G P+ V++NTLI K E+ +L+ M+ G PD T ++V G K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G A NL+ ++++ + IY+ +I LC+ A +L + + G P++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LC +DA L +M++R I P + T+ ALI F G+ EA L DEM+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P LING+CM +++A+ + F K D +YN + F + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ ME+ + + G N +T +I L++
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 231/481 (48%), Gaps = 9/481 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L +P + + +V+ + S A+ ++ +VE+ K P DL++ + N
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM-KQRP-------DLVTVSTLINGL 185
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+K G + E+ + ++ GFQP V+ +LN L K ++ +M I +
Sbjct: 186 CLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++I+ CK+G D ++E +G D+VTY++LI C G+ +D + R
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M RN++PD+VT++ L++ KEGK+ EA +L++ M+ RG++PD ++YN+LI +CKE
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ E+ + M+ G PD T I++ Y K R+ + L E+ G+ + Y+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L++ CQ + AA L + + G PS+ Y L++ LC + AL + ++M
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ + Y +I C + +A SL + + G+ PD V+I G C + +++A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L + D +YN + L +EL + GF+ ++ T K +I
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Query: 600 L 600
L
Sbjct: 605 L 605
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 194/414 (46%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F + +G++P ++ + L+NG + + + + M + P+ T + L +
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G V + ++++ E GF PD VTY +++ CK G A L+R M RN+
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+V Y+ +++ LCK+G +A LF+ M +G+ D+V+Y++LI C +GK + +L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+G I PD T ++ + KEG+LL A L E+ G++ Y+ LI C++
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
N A + + + G P + Y+ L+ S CK V D + L E+ + + P+ TY
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ FC G+ A L EM+ G+ P +L++G C ++NKA + K
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
YN + + + L G P+ +T MI L K
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 183/382 (47%), Gaps = 1/382 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L NG++ + ++ ++E M + P FN L + D V GF + +E G
Sbjct: 42 LRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D+ T +I+ YC+K +L AF + ++ PD +T++TL+NG C EG+V EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L RMV PD+V+ +TLI C +G++ E+ L+ M+ G PD T ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G AL+L +++ + S Y +I +LC+D A SL + G +
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC D + EM+ RNI P + T+ ALI F G+ EA L +E
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ G+ PD+ LI+G+C E +++A + K D +Y+ + N + +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 571 LSKLMELQKRFLRLGFAPNNLT 592
+ M L + G PN +T
Sbjct: 401 VDDGMRLFREISSKGLIPNTIT 422
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 193/398 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI N LL+ + K+ D + E+M R+GI N +T+NIL + FC+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + + +LL +M I D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L +N L+++ K +A L D+M+ R+I P + TY +LI FC R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A + + M+ PD LI G+C K V L + + + DT +Y +
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
DGD ++ K+ + G P+ +T ++ L
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 214/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S A+ ++ +V+ + C ++ + +++ K
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN-------GLCK 162
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I +F K + +V N +++ L K +D +++EM GI PN T
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E+ +P+LVT+N LI ++ K+G+ +A L+ M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD+ TY +L+NG C ++ +A Q+F MV + PD+ +YNTLI +CK +++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ DT T ++QG +G +A + ++ GV Y L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + + A + + + + + IY ++E +CK V D L + + +K
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY +I C EA +L+ +M E G LPDS LI + + D + L
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 523 IREMRSCRFVGDASTIGLVANML-HDGRLDK 552
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 194/416 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K ID + + +M I + FN +
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK VD +++E +G P++VTY++LIS C GR +DA L M + +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+LVT+ L++ KEGK EA +L M+ R + PDI +YN+LI +C ++ ++K +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ L E+ G+ Y LI L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D A + +++ DG P + Y+ L++ LC + AL + D M IK +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ +I+G C ++ + +A ALL
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + D+ +YN + DGD + EL + F + T + + L G
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 201/442 (45%), Gaps = 11/442 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 43 HNLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G ++ AF L M + D+V + T+++ LCK V +A LF M +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++V+Y++LI C G+ ++ LL +M+ I P+ T ++ + KEG+ + A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L ++ + SI DI+ Y LI C +R A + E + P L+ YN L++
Sbjct: 276 KLHDDMIK--RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK V D L EM R + TY LI G A + +M+ G+ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +L++G C + KA + + K D Y + + G + +L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
G PN +T MI L
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGL 475
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 178/364 (48%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ FN L K D V EK++ G +L TYN LI+ +C++ +++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + P +VT ++L+NG C ++ +A L +MV G PD +++ TLI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
K E+ +L+ M+ G P+ T ++V G K G + A NL+ +++ + I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ +I +LC+ A +L + + G P++ Y+ L+ LC +DA L +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ I P+L T+ ALI F G+ EA L D+M++ + PD LING+CM ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA+ + F K D ++YN + F + + EL + G + +T +I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 598 HSLW 601
L+
Sbjct: 368 QGLF 371
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+PS+ +N+L+ ++ K + L ++M I +L TY LI CFC + A++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ +M++ G P L+NGYC K ++ A AL+ + DT ++ + +
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+ + L R ++ G PN +T +++ L K
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 201/415 (48%), Gaps = 11/415 (2%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW---- 178
T +YC ++H L + S A K L ++V K + VF + T+ +
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFS 59
Query: 179 ----AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY++ G +R++ + +R T + F +C +L L+KL W YEE+
Sbjct: 60 GLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 119
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L++
Sbjct: 120 GYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEG 179
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F L M V PD+ TY+ L+NG CKE K +A++LF M+ +GL P+ V + TLI
Sbjct: 180 FRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDG 239
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPD 299
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ Y LI C++ +A +R+ Q+ Y L+ LC DA +
Sbjct: 300 KITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLR 359
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ +KP TY +I FC G + L+ EM G +P VL+NG
Sbjct: 360 EMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 6/336 (1%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DJ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 54 DJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 173
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI C++++ A L + + G VP+ +
Sbjct: 174 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF 233
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V A+ + +M+ +++ P L TY LI C G +A L+DEM
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSX 293
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD LI+G C E D++ A ++ D Y A+ + +G
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVD 353
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHS------LWKG 603
++ + L +G P+ T +I+ +WKG
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 389
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 200/402 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS ++NG K D+ + Y EM I P+ T++ + CK +DK
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G P+ +TYN+++ YC + +A + M V PD+VTY +LM+
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL PDI +Y TL+ Y +G + E +LL M+ NGI+PD
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ Y K+ ++ A+ + ++++ G++ + Y +I LC+ A E
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P++ +Y L+ SLC D A L EM+DR I + + ++I C G
Sbjct: 431 QMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L D M+ G+ P+ LI+GYC+ +++A LL D +YN
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ N + + + L K + G +PN +T ++ L+
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/376 (30%), Positives = 194/376 (51%), Gaps = 1/376 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++S T N + K G +++ T+ + LD P +V+ + ++ L K +D+ +V
Sbjct: 195 DVVSYTTVIN-GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M + G+ PN T+N + H +C + + GFL+K+ +G +PD+VTYN+L+ CK
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR +A ++ M +R + PD+ TY TL+ G +G + E H L MV G+ PD
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N LI AY K+ K+ E+ + +M +G+ P+ T ++ K G + A+ ++
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G++ + +Y LI +LC ++ A L+ + G + +N ++ S CK V
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVI 493
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ L D MV +KP++ TY LI +C G+ EA L+ M GM PD LI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553
Query: 528 NGYCMEKDVNKAEALL 543
NGYC ++ A AL
Sbjct: 554 NGYCRVSRMDDALALF 569
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 184/380 (48%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P HT+ IL C+ G +D L + ++GF + +T+ L+
Sbjct: 72 YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M + +PD+ + T L+ GLC E + +EA +L H M G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+PD+VSY T+I + KEG ++ S +EM+ I PD T I+ K + A+
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ L
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R ++P ++TY L+ + G E +L+D M+ +G+ PD
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDH 371
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y ++ V++A + + + +Y AV + + G + M ++
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G PN + +IHSL
Sbjct: 432 MIDEGLTPNIIVYTSLIHSL 451
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 173/380 (45%), Gaps = 35/380 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ H
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNIL + K VD+ K+ + G +P++VTY +I CK G ++DA + M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P+++ YT+L++ LC KEG+V
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ P++++Y+TLI YC GKM E+ LL M G+ PD T +
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + R+ AL L E+ GVS + Y+ ++ L R AA L I + G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK + +AL + + +++ T+ +I +GR+ EA
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672
Query: 507 LMDEMLESGMLPDSQICRVL 526
L +G++P+ R++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM 692
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 217/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ +C + S +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP- 282
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+E+ +K G +P +V+ N L++ L K + ++++ M + G+
Sbjct: 283 ----------KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T+ L + G + +++ L+ + G PD +N LI +Y K+ ++++A
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M + + P++VTY ++ LCK G V +A F +M+ GL+P+I+ Y +LI + C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K +++ L+ EM+ GI +T I+ + KEGR++ + L + R GV +
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C + AT LL + G P YN L+ C+ + DAL L EM
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V + P++ TY ++ R+ A L + +SG + ++++G C
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLT 632
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + +L F G PN T + M
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 597 IHSL 600
++
Sbjct: 693 AENI 696
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 180/387 (46%), Gaps = 21/387 (5%)
Query: 64 LICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
LIC+ K+ +L Q+ L P + GA + + C+S SV A+ +F +
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA----VIGILCKSGSVDDAMLYFEQM 432
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
D + P Y ++H L +K+ A +++ E+++ C +++ F +I
Sbjct: 433 I-DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTI-FFNSII------ 483
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ K G + ES K F + +G +P++++ + L++G +D+ ++ M +G+
Sbjct: 484 -HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T+N L + +C+ +D +++ G P+++TYN ++ R A
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
LY + + +L TY +++GLCK EA ++F + L + ++N +I A
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+K L NG+ P+ +T +++ + +G L L ++ G ++
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSG 722
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQ 443
+ ++++ L Q A + L I +
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 431 PFAATSLLERIGQDG---YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P AA S R+ + G P++ Y L+ C+ + +V + + T
Sbjct: 65 PAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAIT 124
Query: 488 YRALICCFCGIGRSGEAVSL-MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+ L+ C R+ +A+ + + M E +PD C +L+ G C E +A LL
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184
Query: 547 AKK---FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
A D SY V N F ++GD K L +P+ +T +I +L KG
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 210/432 (48%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + S A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + Y++ G +R++ + +R T + +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P +V+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ L P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L
Sbjct: 240 VKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLK 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A +L+ E+ G+ + Y LI C++ A +R+ Q+ Y L+
Sbjct: 300 QANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + L+ EM G +
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PSVVTYNVLMNG 431
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 7/362 (1%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI+ Y + G L DA YR+ +
Sbjct: 45 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLC 104
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CK+G ++ ++S+
Sbjct: 105 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV Y LI LC+
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+N+ A L + + VP+ + L++ CK V A+ + +M+ +++ P L T
Sbjct: 225 ENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 284
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G +A L+DEM G+ PD LI+G C E D++ A
Sbjct: 285 YNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS------LW 601
++ D +Y A+ + ++G ++ + L +G P+ T +I+ +W
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 404
Query: 602 KG 603
KG
Sbjct: 405 KG 406
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 202/403 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + K L GF+ S +S L+NG+ K+ ++ + R I PN +
Sbjct: 142 GKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIY 201
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+++ CK+ VD+ ++ +G PD+VTY+ L+S +C G+LN A L M
Sbjct: 202 SMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL 261
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
N+ PD+ TYT L++ LCKEGKV+EA + MV ++ D+V Y+TL+ YC ++
Sbjct: 262 ENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNN 321
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + Y M G+ PD I++ G K R+ ALNL E+ + + Y LI
Sbjct: 322 AKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLID 381
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R L + + G P + YN L+++LCK + A+ L ++M D+ I+P
Sbjct: 382 CLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRP 441
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ T+ L+ C +GR A+ ++L G + + V+ING C E +++A AL
Sbjct: 442 NVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQ 501
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I D ++ + F + + K +L + + G
Sbjct: 502 SRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 248/534 (46%), Gaps = 28/534 (5%)
Query: 76 LTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHI 135
L+L + P LP+L H S L +D A++ FN + + PT H
Sbjct: 11 LSLSIPNFPPFLPNLCFHSHSLPPLTHNADD--AVSQFNHM---FHVHPTP-------HT 58
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV--------GLIR 187
+N K+L LV VK P ++ +++ + + ++ + + G +
Sbjct: 59 FHFN-------KILISLVN-VKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVV 110
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
+F K L +G+QP+ ++ N L+ GL + + + ++++ G + ++ IL
Sbjct: 111 LAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILI 170
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK G+ L +IE P++V Y+ +I CK +++A+ LY M + +
Sbjct: 171 NGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGIS 230
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+VTY+ L++G C G++ A L + MV ++PDI +Y L+ A CKEGK++E++++
Sbjct: 231 PDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENV 290
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L M+ + D ++ GY + +A + + + GV+ Y +I LC+
Sbjct: 291 LAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCK 350
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A +L E I Q VP Y L++ LCK ++ L DEM+DR P + T
Sbjct: 351 IKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVIT 410
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G A++L ++M + + P+ +L++G C + A
Sbjct: 411 YNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLL 470
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
K + +Y + N ++G L + + LQ R G + +T + MI + +
Sbjct: 471 TKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFF 524
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 187/362 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + + R+ +P++V + +++ L K +D+ + +Y EM GI P+
Sbjct: 175 KIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVV 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL FC G +++ L ++ E +PD+ TY L+ + CK+G++ +A + +M
Sbjct: 235 TYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V D+V Y+TLM+G C +V A ++F+ M G++PD+ Y+ +I CK ++
Sbjct: 295 VKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRV 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L E+ + PDT T ++ K GR+ +L E+ G Y+ L
Sbjct: 355 DEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNL 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC++ A +L ++ P++ + L++ LCK + +AL +++ +
Sbjct: 415 IDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGY 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
++ TY +I C G EA++L M ++G + D+ ++I + + + +KAE
Sbjct: 475 CLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEK 534
Query: 542 LL 543
L+
Sbjct: 535 LV 536
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 4/417 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ F V P N +L L+ + +Y++M + P+ T NI+
Sbjct: 41 DAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIII 100
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC G V + KI + G+ P+ +T NTL+ C +G++ +A + + +
Sbjct: 101 NCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFR 160
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
++Y L+NG+CK G+ R A +L R+ + P++V Y+ +I CK+ + E+ L
Sbjct: 161 LSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDL 220
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV--AL 425
EM+G GI PD T I+V G+ G+L A++L+ E+ +I+ DIY Y I+ AL
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL--ENINPDIYTYTILVDAL 278
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C++ + A ++L + + + +Y+ LM+ C + V +A + M + P +
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDV 338
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y +I C I R EA++L +E+ + M+PD+ LI+ C ++ L
Sbjct: 339 HCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDE 398
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ Q D +YN + + ++G L + + L + PN T ++ L K
Sbjct: 399 MLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCK 455
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 161/336 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K L+ E++ + + + G P +V+ + L++G + +++ + EM I P+ +
Sbjct: 210 KDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIY 269
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL CK G V + L + + + D+V Y+TL+ YC +N+A ++ M
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ Y+ ++NGLCK +V EA LF + + + PD V+Y +LI CK G++
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRI 389
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
L EM+ G PD T ++ K G L A+ L +++ + + + L
Sbjct: 390 SYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTIL 449
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ R A + + GY ++ Y ++ LCK + +AL L+ M D
Sbjct: 450 LDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGC 509
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
T+ +I F + +A L+ EM+ G+L
Sbjct: 510 ISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 187/453 (41%), Gaps = 74/453 (16%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D + M + P+T FN + +++E +PD T N +
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG- 340
I+ +C G++ AF + + P+ +T TLM GLC EGKV+EA + +++ +G
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159
Query: 341 ----------------------------------LSPDIVSYNTLIFAYCKEGKMQESKS 366
+ P++V Y+ +I CK+ + E+
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV--A 424
L EM+G GI PD T I+V G+ G+L A++L+ E+ +I+ DIY Y I+ A
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVL--ENINPDIYTYTILVDA 277
Query: 425 LCQDNRPFAATSLLE-----------------------------------RIGQDGYVPS 449
LC++ + A ++L + Q G P
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ Y+ ++ LCK V +AL L +E+ +N+ P TY +LI C C GR L D
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFD 397
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EML+ G PD LI+ C +++A AL + + ++ + + + G
Sbjct: 398 EMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG 457
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L +E + L G+ N T MI+ L K
Sbjct: 458 RLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 10/199 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + + P + Y ++ L + + S+ + E+++ + P V + +
Sbjct: 357 ALNLFEEIHQK-NMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD--RGQPPDVITYNN 413
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A K G + + F K D +P++ + LL+GL K+ + + +
Sbjct: 414 LID-------ALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFF 466
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+++ G C N T+ ++ + CK G +D+ ++E+ G D VT+ +I ++ K
Sbjct: 467 QDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDK 526
Query: 289 GRLNDAFYLYRIMYRRNVL 307
+ A L R M R +L
Sbjct: 527 DENDKAEKLVREMIARGLL 545
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 206/417 (49%), Gaps = 11/417 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + FS A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLHSYCTMIHFLCTHQMFSEA-KSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + + T + +C +L L+KL W YE++
Sbjct: 69 FSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ Q+ Y L+ LC+ DA +
Sbjct: 309 PDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ +KP + TY +I FC G + L+ EM +G P VL+NG
Sbjct: 369 LREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 139/353 (39%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA Y + +
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYTLTREHKLW 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CK+G ++ ++S+
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV
Sbjct: 159 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ--------------- 203
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+ + + P+ T
Sbjct: 204 --------------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A L+ +
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++GDL E +KR ++ +++ +I L
Sbjct: 304 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 356
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC EA L +V R DI ++ L
Sbjct: 13 LHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + ++ TC+ +++ K ++ G
Sbjct: 73 ITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 133 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G++P+ LI+G+C
Sbjct: 193 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 252
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + +L G P+
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 312
Query: 592 TCKYMI 597
T +I
Sbjct: 313 TYTTLI 318
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 125 EDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + + ++
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 240/488 (49%), Gaps = 16/488 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I PT + +++ L N+ A +L ++ C + V+Q LI A
Sbjct: 213 ISPTVYTFGVVMKALCLVNEVDSACALLKDMTR--HGCVPNAIVYQTLIH-------ALX 263
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + E K + L +G P + + N ++GL K+ I + ++ + M G PN+
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRI 300
T+ +L H C+ G VD+ L K+ +P++V +NTLI+ Y +GRL++A ++
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHES 379
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M PD+ TY TL+ GLCK+G + A +L + M +G P++++Y LI +CKEG+
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++E++++L EM G G+ + ++ K+ ++ ALN+ ++ G ++
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ N+ A L + + +G + + YN L+ + + ++ +AL L ++M+ R
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
TY LI C G + ++L ++M+ G+ P++ C +LING C ++ A
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + D +YN++ N + G + + L + G P+ +T +I
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS-- 677
Query: 601 WKGMERKF 608
W E F
Sbjct: 678 WHCKEGMF 685
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 210/412 (50%), Gaps = 5/412 (1%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
F + L G P++ + ++ L +N +D + ++M R G PN + L H
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K G V++V LE++ G PD+ T+N I CK R+++A L M R P+
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE- 370
TY LM+GLC+ GKV EA L +++ + P++V +NTLI Y G++ E+K++++E
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHES 379
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ G PD FT ++ G K+G L+SA L+ E+Q G + Y LI C++ R
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A ++L+ + G + YN L+ +LCK + V DAL + +M + KP + T+ +
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C + + EA+ L +ML G++ ++ LI+ + + +A L+ +
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + G++ K + L + + G PNN++C +I+ L +
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 611
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 191/370 (51%), Gaps = 1/370 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQV-YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P++V N L+NG + +D+ V +E M +G P+ T+N L CK G +
Sbjct: 350 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 409
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ +++ +G +P+++TY LI +CK+GRL +A + M + + + V Y L++ L
Sbjct: 410 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 469
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+ KV++A +F M +G PDI ++N+LIF CK K +E+ L +M+ G+ +T
Sbjct: 470 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 529
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ + + G + AL LV ++ G + Y+ LI ALC+ +L E
Sbjct: 530 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 589
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G P+ N L+ LC+ ++ AL +M+ R + P + TY +LI C GR
Sbjct: 590 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 649
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+ EA++L D++ G+ PD+ LI+ +C E + A LL I + ++
Sbjct: 650 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 709
Query: 561 VFNMFAEDGD 570
+ + F ++GD
Sbjct: 710 LVSNFIKEGD 719
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 196/413 (47%), Gaps = 14/413 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y +++H L K A +L ++ P+ V +F LI+ YV
Sbjct: 320 PNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-----PNVV-LFNTLIN-------GYVSR 366
Query: 184 GLIRESFKTFRKT-LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ ++ L VG P I + N L+ GL K + ++ EM G PN T
Sbjct: 367 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 426
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL FCK G +++ L+++ +G + V YN LIS+ CK ++ DA ++ M
Sbjct: 427 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 486
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD+ T+ +L+ GLCK K EA L+ M+ G+ + ++YNTLI A+ + G MQ
Sbjct: 487 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 546
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L+ +M+ G D T +++ + G + L L ++ G++ + + LI
Sbjct: 547 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 606
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ A L + G P + YN L+ LCK +AL L D++ I
Sbjct: 607 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 666
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
P TY LI C G +A L+ ++SG +P+ +L++ + E D
Sbjct: 667 PDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+++ G ++E+ K L G ++ N L+ L + I++ ++E+M G+ P
Sbjct: 538 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 597
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + NIL + C+ G++ FL + G PD+VTYN+LI+ CK GR +A L+
Sbjct: 598 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 657
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD +TY TL++ CKEG +AH L R V G P+ V++ L+ + KE
Sbjct: 658 DKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717
Query: 359 GKMQ 362
G +
Sbjct: 718 GDQE 721
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 240/488 (49%), Gaps = 16/488 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I PT + +++ L N+ A +L ++ C + V+Q LI A
Sbjct: 231 ISPTVYTFGVVMKALCLVNEVDSACALLKDMTR--HGCVPNAIVYQTLIH-------ALS 281
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + E K + L +G P + + N ++GL K+ I + ++ + M G PN+
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRI 300
T+ +L H C+ G VD+ L K+ +P++V +NTLI+ Y +GRL++A ++
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHES 397
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M PD+ TY TL+ GLCK+G + A +L + M +G P++++Y LI +CKEG+
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++E++++L EM G G+ + ++ K+ ++ ALN+ ++ G ++
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ N+ A L + + +G + + YN L+ + + ++ +AL L ++M+ R
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
TY LI C G + ++L ++M+ G+ P++ C +LING C ++ A
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + D +YN++ N + G + + L + G P+ +T +I
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS-- 695
Query: 601 WKGMERKF 608
W E F
Sbjct: 696 WHCKEGMF 703
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 210/412 (50%), Gaps = 5/412 (1%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
F + L G P++ + ++ L +N +D + ++M R G PN + L H
Sbjct: 222 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K G V++V LE++ G PD+ T+N I CK R+++A L M R P+
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE- 370
TY LM+GLC+ GKV EA L +++ + P++V +NTLI Y G++ E+K++++E
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHES 397
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ G PD FT ++ G K+G L+SA L+ E+Q G + Y LI C++ R
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A ++L+ + G + YN L+ +LCK + V DAL + +M + KP + T+ +
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C + + EA+ L +ML G++ ++ LI+ + + +A L+ +
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + G++ K + L + + G PNN++C +I+ L +
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCR 629
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 191/370 (51%), Gaps = 1/370 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQV-YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P++V N L+NG + +D+ V +E M +G P+ T+N L CK G +
Sbjct: 368 NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAR 427
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ +++ +G +P+++TY LI +CK+GRL +A + M + + + V Y L++ L
Sbjct: 428 ELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 487
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+ KV++A +F M +G PDI ++N+LIF CK K +E+ L +M+ G+ +T
Sbjct: 488 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 547
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ + + G + AL LV ++ G + Y+ LI ALC+ +L E
Sbjct: 548 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 607
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G P+ N L+ LC+ ++ AL +M+ R + P + TY +LI C GR
Sbjct: 608 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 667
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+ EA++L D++ G+ PD+ LI+ +C E + A LL I + ++
Sbjct: 668 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYI 727
Query: 561 VFNMFAEDGD 570
+ + F ++GD
Sbjct: 728 LVSNFIKEGD 737
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 196/413 (47%), Gaps = 14/413 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y +++H L K A +L ++ P+ V +F LI+ YV
Sbjct: 338 PNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-----PNVV-LFNTLIN-------GYVSR 384
Query: 184 GLIRESFKTFRKT-LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ ++ L VG P I + N L+ GL K + ++ EM G PN T
Sbjct: 385 GRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVIT 444
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL FCK G +++ L+++ +G + V YN LIS+ CK ++ DA ++ M
Sbjct: 445 YTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMS 504
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD+ T+ +L+ GLCK K EA L+ M+ G+ + ++YNTLI A+ + G MQ
Sbjct: 505 SKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQ 564
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L+ +M+ G D T +++ + G + L L ++ G++ + + LI
Sbjct: 565 EALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILI 624
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ A L + G P + YN L+ LCK +AL L D++ I
Sbjct: 625 NGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 684
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
P TY LI C G +A L+ ++SG +P+ +L++ + E D
Sbjct: 685 PDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+++ G ++E+ K L G ++ N L+ L + I++ ++E+M G+ P
Sbjct: 556 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 615
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + NIL + C+ G++ FL + G PD+VTYN+LI+ CK GR +A L+
Sbjct: 616 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 675
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD +TY TL++ CKEG +AH L R V G P+ V++ L+ + KE
Sbjct: 676 DKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 735
Query: 359 GKMQ 362
G +
Sbjct: 736 GDQE 739
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 205/417 (49%), Gaps = 11/417 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC +H L + FS A K L ++V K + VF ++ T+ +
Sbjct: 5 RHTLHSYCTTIHFLCTHQMFSEA-KSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYV 63
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + +C +L L+KL W YEE+
Sbjct: 64 FSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL 123
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L+
Sbjct: 124 ECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 183
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE + +A++LF M+ +GL P+ V++ TLI
Sbjct: 184 EGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLI 243
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T +V G K+G L A L+ E+ G+
Sbjct: 244 DGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLK 303
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ AA +R+ Q+ Y L+ LC+ DA +
Sbjct: 304 PDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKM 363
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ +KP TY +I FC G + L+ EM +G +P VL+NG
Sbjct: 364 LREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 157/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 34 VVSRKGKGSAXAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLW 93
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 94 VPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLV 153
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M +G+ PD +T +++ G K
Sbjct: 154 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCK 213
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E + A L E+ G+ + + LI C++ R A + +++ +P J
Sbjct: 214 ESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJIT 273
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM + +KP TY LI C G A M+
Sbjct: 274 YNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMI 333
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L DT +Y + N F + GD+
Sbjct: 334 QENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVW 393
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G P +T
Sbjct: 394 KGSKLLKEMQRNGHVPXVVT 413
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 204/412 (49%), Gaps = 11/412 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW------- 178
+YC ++H L S A K L ++V K + VF ++ T+ +
Sbjct: 2 SYCTMIHFLCTQQMLSEA-KSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLI 60
Query: 179 -AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY++ G +R++ + +R T + F +C +L L+KL W YEE+ G
Sbjct: 61 TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L++ F L
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI +CK
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + +M+ + PD T ++ G K+G L A +L+ E+ + +
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKIT 300
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C++ +A +R+ Q+ Y L+ LC+ DA + EM+
Sbjct: 301 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ +KP TY +I FC G + L+ EM G +P VL+NG
Sbjct: 361 NVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 133/336 (39%), Gaps = 36/336 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G DL ++ LI++Y + G L DA YR+
Sbjct: 26 VVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFW 85
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CK+G ++ ++S+
Sbjct: 86 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 145
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV
Sbjct: 146 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQ--------------- 190
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+ + + P+ T
Sbjct: 191 --------------------PDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A L+ +
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 290
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
K D +Y + + ++GDL E +KR ++
Sbjct: 291 MKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 326
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + + ++
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 231
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 275
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 240/564 (42%), Gaps = 72/564 (12%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V AL F + D P Y +VH L KF A ML E++ + C F
Sbjct: 61 VEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMI--ARGCAPDTVTF 116
Query: 167 QDLIS--CTEDCNWAYVKV---------GLIRESFKTF--------------RKTLDV-- 199
LI C +V G +F+T K L V
Sbjct: 117 STLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVI 176
Query: 200 --GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
GF P+++ N ++NG K +D +++ E M G PN TF IL CK V
Sbjct: 177 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 236
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ LEK+ G P++VTY+T+I+ CK+G+++DA+ L+++M RRN P++VT+ L+
Sbjct: 237 EAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 296
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI- 376
+GLCK ++ EA QL+HRM G +PDI++YN+LI CK ++ E+ L + +G+
Sbjct: 297 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 356
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+ T + GY GR+ A + L G S Y LI+ C+ +R
Sbjct: 357 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 416
Query: 437 LLERIGQDGYVPSLE-----------------------------------IYNELMESLC 461
L+E + G+ P + IYN ++E +
Sbjct: 417 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 476
Query: 462 KCDSVADALLLKDEMV---DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ AL + ++++ DR PS S AL+ C +GR+ +A L+ +M E G
Sbjct: 477 RASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAA 536
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
L++G + ++A + + + N V + + EL
Sbjct: 537 AVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELV 596
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+R +LG P+ TC +I K
Sbjct: 597 QRMSKLGCCPDIETCNTLIGGYCK 620
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 222/473 (46%), Gaps = 13/473 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT + L+++ A K+L ++E K C +V F LI+ K
Sbjct: 182 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIE--KGCVPNVFTFTILIT-------GLCKA 232
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ + K + G P++V+ + ++NGL K +D +++++ M R PN T
Sbjct: 233 NRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTH 292
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL CK +++ ++ E G PD++TYN+LI CK ++++AF L++ +
Sbjct: 293 NILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE 352
Query: 304 RNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V + VTY+TL +G G++ +A ++F +V +G SPD+ +Y +LI YCK +
Sbjct: 353 SGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAV 412
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E L+ EM G P T ++ G + A+ L + G + IY+ ++
Sbjct: 413 EVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVV 472
Query: 423 VALCQDNRPFAATSLLERI---GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+ + ++ A ++LE++ + PS + L+ESLC+ DA L +M +R
Sbjct: 473 EGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSER 532
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++S+Y L+ + R EA + + M+ +G P+ V+I+ C V+ A
Sbjct: 533 GFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA 592
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L+ +K D E+ N + + + G +L + G PN+ T
Sbjct: 593 YELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTT 645
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 184/404 (45%), Gaps = 39/404 (9%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M RI + PN T+ IL F GD+D LE+++ GF+ + V + TL+ C GR
Sbjct: 1 MARICM-PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGR 59
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+ +A +R M ++ PD++TYT L++ LCK GK EA + M+ RG +PD V+++T
Sbjct: 60 VVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFST 118
Query: 351 LIFAYCKEGKMQESKSLLYEM----MGN-------------------------------- 374
LI CK G +++ +L ++ MGN
Sbjct: 119 LIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK 178
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G P +++ G+ K L SA L+ + G + + LI LC+ NR A
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
LLE++ G P++ Y+ ++ LCK V DA L M RN P++ T+ LI
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK-FQIY 553
C R EA L M E+G PD LI+G C V++A L +
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 358
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +Y+ +F+ +A G ++ + + GF+P+ T +I
Sbjct: 359 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 162/334 (48%), Gaps = 2/334 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ TY LI + G L+ A L M + V +TTLM GLC G+V EA +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F R + + +PD+++Y L+ A CK GK E++ +L EM+ G PDT T ++ G K
Sbjct: 67 F-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD-NRPFAATSLLERIGQDGYVPSLE 451
G A ++ ++ + G+ S ++ +I LC N A+ +L + G+ P++
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
++N ++ CK + A L + M+++ P++ T+ LI C R GEA L+++M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ G P+ +ING C + V+ A L ++ + ++N + + + +
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ +L R G AP+ +T +I L K +
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 339
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P + + + +L GL + N ++ Q+++ M G + +N++ + +K
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKA 484
Query: 260 NGFLEKI---EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
LE++ + F+P + L+ S C+ GR +DA L M R + +Y L
Sbjct: 485 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGL 544
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GL + + EA Q+F MV G +P+I + N +I C K+ ++ L+ M G
Sbjct: 545 LSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGC 604
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
PD TC ++ GY K GR A L+ E+ G+ + +D L
Sbjct: 605 CPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 4/283 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +G + ++ + F +D GF P + + L+ K + + ++ EEM G P
Sbjct: 369 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YL 297
+T + + + ++ + + G D + YN ++ + + N A L
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488
Query: 298 YRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+++ +R+ P L+ LC+ G+ +A QL H+M RG + + SYN L+
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ + E+ + M+ G P+ T +++ ++ A LV + + G
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 608
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ + LI C+ R A LLE + + G P+ + ++L+E
Sbjct: 609 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN-DTTHDLLE 650
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K + +F F L+ G ++ + N LL+ L K +++ +++E+ GI P
Sbjct: 342 GYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++N + C+ +++ +++ + GF P+ VT+ L+ Y KKG + +AF ++
Sbjct: 401 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M N+LP T ++ GLCK G+ E LF++ V +G P + YNT+I + KE
Sbjct: 461 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + ++ EM GI P T T ++ G+ K + AL L+ +++R G+ + Y
Sbjct: 521 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 580
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ +A LL + G P+ IYN ++ ++V +A+ L +MV+
Sbjct: 581 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 640
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I L TY +LI GR A + EML G+LPD + VLING C +
Sbjct: 641 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 700
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A +L K I YN + ++G+L + L L G P+N+T +++
Sbjct: 701 ARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760
Query: 599 SLWKG 603
+KG
Sbjct: 761 GKFKG 765
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/543 (23%), Positives = 233/543 (42%), Gaps = 42/543 (7%)
Query: 92 AHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
+H I+ +L R +SD SAL +F +K +E + C+++ IL N+ + + L +
Sbjct: 82 SHVINTLLNR-KSDPTSALKYFERIKKKIEFAKCTDAVCILLLILT-NSAETHRAQYLFD 139
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAY-VKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
K S + L+ CT+ N+ ++ G I E+ + F + G + + +
Sbjct: 140 QFASGKSVRFSC-LMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSI 198
Query: 211 LLNGL-LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
++ L LK N + EM G P TF + K G+V + + +
Sbjct: 199 FVHLLCLKPNS-GYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNC 257
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G +L +L+ YC +G L A L + ++P+ VTY+ L++G CK G + +A
Sbjct: 258 GKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKA 317
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ + M +G+ + S N+++ Y K Q + ++ + + +G+ + FT ++
Sbjct: 318 FEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSW 376
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
KEG++ A NL E+ G+S + Y+ +I+ C+ + AA + + + +G+ P+
Sbjct: 377 LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPN 436
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ LM+ K + +A + M D NI P+ +T +I C GRS E L +
Sbjct: 437 AVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFN 496
Query: 510 -----------------------------------EMLESGMLPDSQICRVLINGYCMEK 534
EM E G+ P + LI+G+C
Sbjct: 497 KFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGN 556
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+++ A LL +K D ++Y + + F + D+ EL G +PN
Sbjct: 557 NIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYN 616
Query: 595 YMI 597
MI
Sbjct: 617 SMI 619
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 1/281 (0%)
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+EG + EA Q F + RG+ D +Y+ + C + + SLL EM G P
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ KEG + AL L ++ G S++ + L+ C +A L+ I
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G VP+ Y+ L++ CK ++ A EM + I+ S+ + +++ +
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A ++ ++ LESG L + L++ C E +N+A L K + SYN +
Sbjct: 350 QNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++ ++ K L GF PN +T ++ +K
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 449
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 190/362 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I +SF + + GF P++V L++G K I++ ++ EMG+ G+ N
Sbjct: 175 EAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L H KNG + EK++E G P+L TYN +++ CK GR DAF ++ M
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V ++VTY TL+ GLC+E K EA+++ +M ++P++++YNTLI +C GK+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKL 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ SL ++ G+ P T ++V G+ ++G A +V E++ G+ S+ Y L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + + A L + + G VP + Y+ L+ C + +A L MV++ +
Sbjct: 415 IDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKML 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ Y +I +C G S A+ L +M E + P+ LI C E+ + +AE
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAED 534
Query: 542 LL 543
L+
Sbjct: 535 LV 536
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 213/450 (47%), Gaps = 36/450 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+ + S F + +D GF P N LL ++ + +Q W + E +I +
Sbjct: 103 AYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKVVL 161
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA---- 294
+ ++F I+ C+ G+++K L ++ E GF P++V Y TLI CKKG + A
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 295 -------------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F +Y M V P+L TY +MN LCK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ ++A ++F M RG+S +IV+YNTLI C+E K E+ ++ +M I P+ T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ G+L AL+L +L+ G+S S Y+ L+ C+ A +++ + +
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PS Y L+++ + D++ A+ L+ M + + P + TY LI FC G+ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L M+E + P+ I +I GYC E +A L +K + SY+ +
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIR 521
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ ++ L + +L ++ + G P++ C
Sbjct: 522 VLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 2/284 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +++FK F + + G +IV+ N L+ GL + ++ +V ++M I PN
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FC G + K ++ G P LVTYN L+S +C+KG + A + + M
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P VTYT L++ + + A QL M GL PD+ +Y+ LI +C +G+M
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L M+ + P+ ++ GY KEG AL L +++ ++ + Y YL
Sbjct: 460 NEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYL 519
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
I LC++ + A L+E++ G PS I N + S K DS
Sbjct: 520 IRVLCKERKLKEAEDLVEKMIDSGIDPSDTICN--LISRAKTDS 561
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 115/211 (54%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ VG + ++ R G PS+V+ N L++G + ++ +EM GI P
Sbjct: 347 GFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL F ++ +++ +EE G PD+ TY+ LI +C KG++N+A L+
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P+ V Y T++ G CKEG A +LF M + L+P++ SY+ LI CKE
Sbjct: 467 KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKE 526
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
K++E++ L+ +M+ +GI P C +I +
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 228/510 (44%), Gaps = 69/510 (13%)
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
PLLP H + ++RCQ D + AL FN ++ + K T S Y I+ L KF
Sbjct: 4 PLLPK---HVTT--VIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEA 58
Query: 145 AMKMLCELVELVKD-------------------CPHSVDVFQ--DLISCTEDCNWAY--- 180
++L ++ + V + +V+VF+ D C E ++Y
Sbjct: 59 MEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDC-EPTVFSYNAI 117
Query: 181 ----VKVGLIRESFKTFRKTLDVGFQPSIVSCNF----------------LLN------- 213
V G ++ K + + D G P + S LLN
Sbjct: 118 MSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGC 177
Query: 214 ------------GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
G + N D+ ++++ +M G+ TFN L HV CK GDV +
Sbjct: 178 EMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEK 237
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L+K+ + G P+L TYN I C+KG L+ A + + + PD+VTY L+ GLC
Sbjct: 238 LLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLC 297
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K K +EA ++V+ GL PD +YNTLI YCK G +Q ++ +L + NG PD F
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T + ++ G EG AL L E G+ + +Y+ LI L A L +
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G +P ++ +N L+ LCK V+DA L M+ + P + T+ LI + +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYC 531
A+ ++D M+++G+ PD L+NG C
Sbjct: 478 ENALEILDVMMDNGVDPDVYTYNSLLNGLC 507
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 202/425 (47%), Gaps = 7/425 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E K K + G P++ + NF + GL + +D ++ + G P+
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVV 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CKN + +L K+ EG +PD TYNTLI+ YCK G + A +
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNA 347
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+PD TY +L++GLC EG+ A LF+ + +G+ P+++ YNTLI +G +
Sbjct: 348 VFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLI 407
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L EM G+ P+ T I+V G K G + A LV + G ++ L
Sbjct: 408 LEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + A +L+ + +G P + YN L+ LCK D + MV++
Sbjct: 468 IHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGC 527
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+L T+ L+ C + +A+ L++EM + PD+ LI+G+C D++ A
Sbjct: 528 APNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 542 LLGFFAKKFQIY----DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
L F K ++Y T +YN + + F E +++ +L + + P+ T + M+
Sbjct: 588 L---FRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 598 HSLWK 602
K
Sbjct: 645 DGFCK 649
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 7/421 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICPNT 240
G + + + + +D G +P +V+ N+L+ GL K N Q +VY +G++ G+ P++
Sbjct: 265 GELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCK-NSKFQEAEVY--LGKLVNEGLEPDS 321
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L +CK G V L GF PD TY +LI C +G N A L+
Sbjct: 322 FTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + P+++ Y TL+ GL +G + EA QL M +GL P++ ++N L+ CK G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L+ M+ G +PD FT I++ GY + ++ +AL ++ + GV Y+
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ ++ + + + G P+L +N L+ESLC+ + AL L +EM +++
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS 561
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP-DSQICRVLINGYCMEKDVNKA 539
+ P T+ LI FC G A +L +M E M+ + ++I+ + + +V A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMA 621
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
E L + D +Y + + F + G++ + + GF P+ T +I+
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 600 L 600
L
Sbjct: 682 L 682
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 171/343 (49%), Gaps = 11/343 (3%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F + L G +P+++ N L+ GL I + Q+ EM G+ P TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTF 429
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL + CK G V +G ++ + +G+ PD+ T+N LI Y + ++ +A + +M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMD 489
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V PD+ TY +L+NGLCK K + + + MV +G +P++ ++N L+ + C+ K+ +
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDK 549
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDIYDYLI 422
+ LL EM + PD T ++ G+ K G L A L +++ + VS S Y+ +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIII 609
Query: 423 VALCQDNRPFAATSLLER-----IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
A + A L + +G DGY Y +++ CK +V EM+
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYT-----YRLMVDGFCKTGNVDLGYKFLLEMM 664
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ PSL+T +I C C R EA ++ M++ G++P++
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 19/509 (3%)
Query: 59 NKIVDLICSSLKKGDSHL--TLLQNDLK-PLLPHLGAHEISRVLLRCQSDSVSALTFFNW 115
NK++ ++C KKGD LL +K +LP+L + L CQ + A
Sbjct: 220 NKLLHVLC---KKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL-CQKGELDAAVRMVG 275
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
D KP Y +++ L N+KF A L +LV + P S + LI+
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE-PDSF-TYNTLIA---- 329
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
Y K G+++ + + + GF P + L++GL ++ ++ E G
Sbjct: 330 ---GYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
I PN +N L G + + ++ E+G P++ T+N L++ CK G ++DA
Sbjct: 387 IKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L ++M + PD+ T+ L++G + K+ A ++ M+ G+ PD+ +YN+L+
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGL 506
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK K ++ M+ G P+ FT I+++ + +L AL L+ E++ V+
Sbjct: 507 CKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDA 566
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVP-SLEIYNELMESLCKCDSVADALLLKD 474
+ LI C++ A +L ++ + V S YN ++ + + +V A L
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EMVDR + P TYR ++ FC G + EM+E+G +P +IN C+E
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFN 563
V +A ++ +K + E+ N +F+
Sbjct: 687 RVYEAAGIIHRMVQKGLV--PEAVNTIFD 713
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 143/362 (39%), Gaps = 38/362 (10%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
++ T + C+ + + F +E+GF L TY ++I G+ +A + R
Sbjct: 9 HVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKF-EAMEEVLVDMR 67
Query: 304 RNVLPDLV--TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+NV ++ Y M ++GKV+EA +F RM P + SYN ++ G
Sbjct: 68 QNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYF 127
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ + M GI PD ++ I ++ +
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSF------------------------------- 156
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
C+ +RP AA LL + G ++ Y ++ + + + L +M+ +
Sbjct: 157 ----CRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGV 212
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
LST+ L+ C G E L+D++++ G+LP+ I G C + +++ A
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVR 272
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
++G + D +YN + ++ + + + G P++ T +I
Sbjct: 273 MVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYC 332
Query: 602 KG 603
KG
Sbjct: 333 KG 334
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 200/402 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS ++NG K D+ + Y EM I P+ T++ + CK +DK
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G P+ +TYN+++ YC + +A + M V PD+VTY +LM+
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL PDI +Y TL+ Y +G + E +LL M+ NGI+PD
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ Y K+ ++ A+ + ++++ G++ + Y +I LC+ A E
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFE 430
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P++ +Y L+ SLC D A L EM+DR I + + ++I C G
Sbjct: 431 QMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEG 490
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L D M+ G+ P+ LI+GYC+ +++A LL D +YN
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ N + + + L K + G +PN +T ++ L+
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 194/375 (51%), Gaps = 1/375 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++S T N + K G +++ T+ + LD P +V+ + ++ L K +D+ +V
Sbjct: 195 DVVSYTTVIN-GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M + G+ PN T+N + H +C + + GFL+K+ +G +PD+VTYN+L+ CK
Sbjct: 254 LTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCK 313
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR +A ++ M +R + PD+ TY TL+ G +G + E H L MV G+ PD
Sbjct: 314 NGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHV 373
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N LI AY K+ K+ E+ + +M +G+ P+ T ++ K G + A+ ++
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G++ + +Y LI +LC ++ A L+ + G + +N ++ S CK V
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVI 493
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ L D MV +KP++ TY LI +C G+ EA L+ M GM PD LI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553
Query: 528 NGYCMEKDVNKAEAL 542
NGYC ++ A AL
Sbjct: 554 NGYCRVSRMDDALAL 568
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 184/380 (48%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P HT+ IL C+ G +D L + ++GF + +T+ L+
Sbjct: 72 YNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M + +PD+ + T L+ GLC E + +EA +L H M G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+PD+VSY T+I + KEG ++ S +EM+ I PD T I+ K + A+
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV + Y+ ++ C +P A L+++ DG P + YN LM+ L
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYL 311
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R ++P ++TY L+ + G E +L+D M+ +G+ PD
Sbjct: 312 CKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDH 371
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y ++ V++A + + + +Y AV + + G + M ++
Sbjct: 372 HVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQ 431
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G PN + +IHSL
Sbjct: 432 MIDEGLTPNIIVYTSLIHSL 451
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 171/373 (45%), Gaps = 35/373 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ H
Sbjct: 313 KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNIL + K VD+ K+ + G +P++VTY +I CK G ++DA + M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P+++ YT+L++ LC KEG+V
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ P++++Y+TLI YC GKM E+ LL M G+ PD T +
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + R+ AL L E+ GVS + Y+ ++ L R AA L I + G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK + +AL + + +++ T+ +I +GR+ EA
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672
Query: 507 LMDEMLESGMLPD 519
L + +G++PD
Sbjct: 673 LFAALSANGLVPD 685
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/484 (23%), Positives = 215/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ +C + S +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQP- 282
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+E+ +K G +P +V+ N L++ L K + ++++ M + G+
Sbjct: 283 ----------KEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGL 332
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T+ L + G + +++ L+ + G PD +N LI +Y K+ ++++A
Sbjct: 333 EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAML 392
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M + + P++VTY ++ LCK G V +A F +M+ GL+P+I+ Y +LI + C
Sbjct: 393 VFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K +++ L+ EM+ GI +T I+ + KEGR++ + L + R GV +
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C + AT LL + G P YN L+ C+ + DAL L EM
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V + P++ TY ++ R+ A L + +SG + ++++G C
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLT 632
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +T ++N + + G + +L G P+ T M
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLM 692
Query: 597 IHSL 600
+L
Sbjct: 693 AENL 696
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 201/438 (45%), Gaps = 11/438 (2%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F + K LE P + YC ++ A M L +L +V++ H +++
Sbjct: 324 FDSMTKRGLE--PDIATYCTLLQGYATKGAL-VEMHALLDL--MVRNGIHPDHHVFNILI 378
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C AY K + E+ F K G P++V+ ++ L K +D +E+M
Sbjct: 379 C------AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ PN + L H C DK + ++ + G + + +N++I S+CK+GR+
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++ L+ +M R V P+++TY+TL++G C GK+ EA +L M G+ PD V+YNTL
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I YC+ +M ++ +L EM+ +G+ P+ T II+QG R +A L V + + G
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ Y+ ++ LC++N A + + + +N ++ +L K +A
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L + + P + TY + G E L M E+G +S++ ++
Sbjct: 673 LFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLL 732
Query: 532 MEKDVNKAEALLGFFAKK 549
D+ +A L +K
Sbjct: 733 QRGDITRAGTYLSMIDEK 750
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 173/365 (47%), Gaps = 15/365 (4%)
Query: 80 QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
Q+ L P + GA + + C+S SV A+ +F + D + P Y ++H L
Sbjct: 399 QHGLNPNVVTYGA----VIGILCKSGSVDDAMLYFEQMI-DEGLTPNIIVYTSLIHSLCI 453
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD 198
+K+ A +++ E+++ C +++ F +I ++ K G + ES K F +
Sbjct: 454 FDKWDKAEELILEMLDR-GICLNTI-FFNSII-------HSHCKEGRVIESEKLFDLMVR 504
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G +P++++ + L++G +D+ ++ M +G+ P+ T+N L + +C+ +D
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+++ G P+++TYN ++ R A LY + + +L TY +++
Sbjct: 565 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILH 624
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK EA ++F + L + ++N +I A K G+ E+K L + NG+ P
Sbjct: 625 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 684
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ + ++G L +L + ++ G + + + + ++ L Q A + L
Sbjct: 685 DVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYL 744
Query: 439 ERIGQ 443
I +
Sbjct: 745 SMIDE 749
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 431 PFAATSLLERIGQDG---YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P AA S R+ + G P++ Y L+ C+ + +V + + T
Sbjct: 65 PAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAIT 124
Query: 488 YRALICCFCGIGRSGEAVSL-MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+ L+ C R+ +A+ + + M E +PD C +L+ G C E +A LL
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184
Query: 547 AKK---FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
A D SY V N F ++GD K L +P+ +T +I +L KG
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 241/507 (47%), Gaps = 26/507 (5%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF--------------S 143
L R + D +AL F +P+ + ++HILA +F S
Sbjct: 19 ALRRVRLDPDAALHLFRLAP----CRPSLLAHAQLLHILAHARRFPAARALLASLLSAHS 74
Query: 144 FAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
A + +LVE+ KD S F L+ A+ G ++++ F + G +
Sbjct: 75 VAPTLFPDLVEVYKDFSFSAASFDLLLR-------AHADAGQLKDALYVFDEMGKAGSRR 127
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
++ SCN LLN L++ I V+++M G P+ T I+ +C++G V FL
Sbjct: 128 TLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFL 187
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++EE G D +LV Y+ ++ YC+ G+ A L + + + P++VTYT L+ G CKE
Sbjct: 188 KEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKE 247
Query: 324 GKVREAHQLFHRMV-HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ EA ++ + + + D V+Y LI YC+ G+M+++ + EM+ G+ + F
Sbjct: 248 GRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFV 307
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ GY K GR+ L+ + GV++ Y+ L+ C+ A + +
Sbjct: 308 YNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMV 367
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G+ + YN L+ C ++ DAL L M+ R + P+ + L+ F G++
Sbjct: 368 RNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTE 427
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A++L E L G+ + +ING C + + +AE L + D+ +Y +
Sbjct: 428 QALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLI 487
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ + + GDL + +++ LGF P+
Sbjct: 488 DGYCKLGDLGRATQIRIEMENLGFVPS 514
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 231/485 (47%), Gaps = 20/485 (4%)
Query: 118 NDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
+ L++K S N Y L+V + A K++ E+ E K V + LI+
Sbjct: 223 HSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEV-AYGALIN--- 278
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
Y + G + ++ + + +D G Q ++ N ++NG KL + + ++ +
Sbjct: 279 ----GYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYR 334
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ + +++N L +C+ G + K + + GF +TYNTL++ +C +G ++DA
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L+ +M +R V+P+ ++ +TL++G K GK +A L+ + RGL+ ++V+ NT+I
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK +M E++ L + M D+ T + ++ GY K G L A + +E++ G S
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
++++ I L + + + G P+ Y L+ CK ++ DA +L
Sbjct: 515 VEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYF 574
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EMV++ +KP+L L+ CF G+ EA ++ ++ ++ M+ D + I K
Sbjct: 575 EMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIG-----K 629
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+ E+L G + +I +N V + G ++ L + GF P+N T
Sbjct: 630 VAHIIESLAGGNHQSAKIM----WNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYS 685
Query: 595 YMIHS 599
+IH
Sbjct: 686 SLIHG 690
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 198/419 (47%), Gaps = 13/419 (3%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ K + L G P+ +SC+ LL+G K +Q +++E G+ N T
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTI 448
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CKN + + +++E D +TY TLI YCK G L A + M
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN 508
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+P + + + + GL + + + + M +GLSP+ V+Y LI +CKEG + +
Sbjct: 509 LGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +EM+ G+ P+ F C ++V + +EG++ A NLV++ + D ++
Sbjct: 569 ACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA-NLVLQ----------KLADTDMI 617
Query: 424 ALCQDN--RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
C + ++E + + + ++N ++ LCK VADA L +++ +
Sbjct: 618 QDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGF 677
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY +LI G A L DEML + + P+ LI G C +V++A +
Sbjct: 678 IPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVS 737
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + +YN + + +DG+ ++ +L+++ ++ G P T +IH L
Sbjct: 738 LFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGL 796
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 64/428 (14%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V + ISC+ + + K G ++ +++TL G ++V+ N ++NGL K + +
Sbjct: 406 VVPNEISCSTLLD-GFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEA 464
Query: 225 WQVYEEMGRIGICP-NTHTFNILTHVFCKNGDVDKVN---------GFLEKIE------- 267
+++ M CP ++ T+ L +CK GD+ + GF+ +E
Sbjct: 465 EELFHRMKEWS-CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFIT 523
Query: 268 -------------------EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+G P+ VTY LI+ +CK+G L+DA LY M + + P
Sbjct: 524 GLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKP 583
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI----------------------- 345
+L + L++ +EGKV EA+ + ++ + D
Sbjct: 584 NLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQ 643
Query: 346 ---VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
+ +N +I CK G++ ++++L ++ G PD FT ++ G G + A L
Sbjct: 644 SAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGL 703
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
E+ ++ + Y+ LI LC+ A SL ++ G P+ YN L++ CK
Sbjct: 704 RDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCK 763
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A LK +M+ I+P++ TY LI C G EA+ L+D+M+E+ + P+
Sbjct: 764 DGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFIT 823
Query: 523 CRVLINGY 530
LI GY
Sbjct: 824 YWTLIQGY 831
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 187/413 (45%), Gaps = 35/413 (8%)
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFK 191
+++ L N + + A ++ + E CP ++ LI Y K+G + + +
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEW--SCPCDSLTYRTLID-------GYCKLGDLGRATQ 501
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
+ ++GF PS+ N + GL + + EM G+ PNT T+ L +C
Sbjct: 502 IRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWC 561
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL- 310
K G++ ++ E+G P+L + L+S + ++G++++A + + + +++ D
Sbjct: 562 KEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCS 621
Query: 311 -------------------------VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ + ++ GLCK G+V +A LF + +G PD
Sbjct: 622 ASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDN 681
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+Y++LI G + + L EM+ + P+ T ++ G K + A++L +
Sbjct: 682 FTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNK 741
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
LQ G+S + Y+ LI C+D A L +++ ++G P++ Y L+ LC
Sbjct: 742 LQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGY 801
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ +A+ L D+M++ N+ P+ TY LI + G L +EM G+LP
Sbjct: 802 MEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 1/362 (0%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+F++L G + +++ + G L + N L++ + G + A +++ M
Sbjct: 96 SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LPD T + C++G+V A M GL ++V+Y+ ++ YC+ G+
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDY 420
+ ++ LL+ + G+ P+ T ++V+GY KEGR+ A +V E+ + + I Y
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI CQ R A + + + G ++ +YN ++ CK + + L R
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ +Y L+ +C G +A D M+ +G + L+NG+C ++ A
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K+ + + S + + + F + G + + L K L G A N +T +I+ L
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455
Query: 601 WK 602
K
Sbjct: 456 CK 457
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ F GF P + + L++G ID + + +EM + PN
Sbjct: 658 KLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIV 717
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK+ +V + K++ +G P+ +TYNTLI +CK G +AF L + M
Sbjct: 718 TYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKM 777
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P + TYT L++GLC +G + EA +L +M+ + P+ ++Y TLI Y + G M
Sbjct: 778 IKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNM 837
Query: 362 QESKSLLYEMMGNGIYPDTFTCQI 385
+ L EM G+ P +T +
Sbjct: 838 KAITKLYNEMHICGLLPANWTGHV 861
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 137/297 (46%), Gaps = 26/297 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSI------VSC----------NFLLNGLLKLNCID 222
+ K G + ++ + + ++ G +P++ VSC N +L L + I
Sbjct: 559 GWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQ 618
Query: 223 QCWQVYEEMGRIG-----ICPNTHT-----FNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
C +G++ + H +NI+ CK G V E ++ +GF
Sbjct: 619 DCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFI 678
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD TY++LI G ++ AF L M + P++VTY +L+ GLCK V A L
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F+++ +G+SP+ ++YNTLI +CK+G E+ L +M+ GI P FT I++ G
Sbjct: 739 FNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCT 798
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+G + A+ L+ ++ V + Y LI + A T L + G +P+
Sbjct: 799 QGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPA 855
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 201/413 (48%), Gaps = 23/413 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV-KDCPHSV---------------DV 165
++ T +YC ++H L + F A ++ +V KD +V V
Sbjct: 9 VRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYV 68
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI+ AY++ G IR++ + FR T F+ +C +L L+K W
Sbjct: 69 FSGLIT-------AYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVW 121
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
Y+E+ G + + FNIL H FCK G++ + I + G P +V++NTL++ Y
Sbjct: 122 GFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K G L++ F L M V PD+ TY+ L+NGLCKE ++ EA+ LF M+ GL P+
Sbjct: 182 IKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNG 241
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++ TLI +CK G++ + + +M+ G PD T ++ G K+G L A L+ E
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDE 301
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ R G+ + Y LI C++ A L ER+ ++ +Y L+ LC+
Sbjct: 302 MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGR 361
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
DA + EM+ +KP TY ++ FC G +A L+ EM +G +P
Sbjct: 362 AVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L ++ A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + +R+ L+ GF P +V+ N L+ GL K + Q + +EM R G+ P+
Sbjct: 251 HCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ E++ +E D V Y LI C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M R + PD TYT +MN CK+G V++A +L M G P +V+
Sbjct: 371 EMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 178/362 (49%), Gaps = 2/362 (0%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
NI+ C+NG V + G + ++ + PD+V+YNTLI+ CK +L +A L M
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
P+ VT TTLM+GLCK+G++ EA +L M +G D+V Y TLI +C G +
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
K L EM+G GI + T +V G + G+ A ++ + G+ Y LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+D R A LL + + G PS YN L+ LCK V DA + M+++ K
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEML--ESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ TY L+ C G+ EA+ L + M E+ + P+ +LI G C E + KA
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ KK + +YN + + G + + MEL K+ L LGF PN+ T +I
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Query: 601 WK 602
K
Sbjct: 361 CK 362
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 220/460 (47%), Gaps = 44/460 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +GLIRE RK++ P IVS N L+NGL K + + + EM G PN
Sbjct: 15 FEAMGLIRE---MGRKSV----SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 67
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ T L CK+G +D+ LE ++++GFD D+V Y TLIS +C G L+ L+
Sbjct: 68 SVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD 127
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + ++VTY+ L++GLC+ G+ +EA+ + + M G+ PD+V+Y LI CK+G
Sbjct: 128 EMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG 187
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + LL M+ G P T +++ G KEG ++ A ++ + G Y+
Sbjct: 188 RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYN 247
Query: 420 YLIVALCQDNRPFAATSLLERI--GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ LC + A L + ++ P++ +N L+ LCK + A+ + +MV
Sbjct: 248 TLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMV 307
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +L TY L+ G+ EA+ L ++L+ G +P+S +LI+G+C + +N
Sbjct: 308 KKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLN 367
Query: 538 KAEALL-------------------------GFFAKKFQIY----------DTESYNAVF 562
A+ L G + ++ D S+N +
Sbjct: 368 IAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMI 427
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + GD + ELQ + + +G P+ LT +I+ L K
Sbjct: 428 DGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSK 467
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 226/496 (45%), Gaps = 31/496 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P +Y +++ L K A+ +L E+ + F + ++CT +
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEM--------EAAGCFPNSVTCTTLMD-GLC 79
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + GF +V L++G +D+ ++++EM GI N
Sbjct: 80 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 139
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L H C+ G + N L + E G PD+VTY LI CK GR A L +M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P VTY L++GLCKEG V +A ++ M+ +G D+V+YNTL+ C +GK+
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259
Query: 362 QESKSLLYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
E+ L M N + P+ FT +++ G KEGRL A+ + ++ + G + Y+
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ + + A L +++ G+VP+ Y+ L++ CK + A L EM
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+L Y L+ C G +A SL EM + PD +I+G D
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ-- 437
Query: 540 EALLGFFAKKFQIY--------DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
F K+ Q+ D +++ + N ++ G+L + +R + GF P+ L
Sbjct: 438 ------FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDAL 491
Query: 592 TCKYMIHSLWKGMERK 607
+ SL KG+ K
Sbjct: 492 ----VYDSLLKGLSSK 503
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 205/423 (48%), Gaps = 2/423 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G +E+ + G P +V+ L++GL K + M G P+
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L CK G V L + E+G D+VTYNTL+ C KG++++A L+ M
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269
Query: 302 Y-RRNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ N L P++ T+ L+ GLCKEG++ +A ++ +MV +G ++V+YN L+ K G
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 329
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+ L +++ G P++FT I++ G+ K L A L E++ G++ + Y+
Sbjct: 330 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 389
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ +LC++ A SL + +G P + +N +++ K L+ +MV+
Sbjct: 390 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 449
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P T+ LI +G EA S ++ M+ SG PD+ + L+ G + D +
Sbjct: 450 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 509
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL A K + D + + + +MEL F + +++C ++
Sbjct: 510 INLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQ 569
Query: 600 LWK 602
L +
Sbjct: 570 LHQ 572
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 134/272 (49%), Gaps = 10/272 (3%)
Query: 109 ALTFFNWV-KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
AL FN + N+ ++P + +++ L + + A+K+ ++V+ C + V
Sbjct: 262 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK-KGSCGNLVTYNM 320
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L C +K G I+E+ + +++ LD+GF P+ + + L++G K+ ++ +
Sbjct: 321 LLGGC--------LKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGL 372
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ EM G+ P +N L CK G +++ +++ +PD++++NT+I K
Sbjct: 373 FCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLK 432
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G L M + PD +T++TL+N L K G++ EA RMV G +PD +
Sbjct: 433 AGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALV 492
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
Y++L+ +G E +LL++M G D
Sbjct: 493 YDSLLKGLSSKGDTTEIINLLHQMAAKGTVLD 524
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 214/427 (50%), Gaps = 2/427 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I F K L G+QP ++ L+ GL +++ ++++ GI +
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFD 163
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK GD + KI+ P++ YNT+I + CK +++A+ L+
Sbjct: 164 QVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFS 223
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + D+VTYTTL+ G C K++EA L + MV + ++P++ +YN L+ A CKEG
Sbjct: 224 EMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+K++L M+ + PD T ++ GY L A ++ + GV+ Y
Sbjct: 284 KVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYT 343
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C++ A +L + + Q VP + Y+ L++ LCK ++ L DEM DR
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
I ++ TY +LI C G A++L ++M + G+ P S +L++G C + A
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463
Query: 540 -EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
EA K + + D YN + N + G L + + + + G PN +T +I+
Sbjct: 464 QEAFQDLLTKGYHL-DVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIIN 522
Query: 599 SLWKGME 605
+L+K E
Sbjct: 523 ALFKKDE 529
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 186/362 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K RK +P++ N +++ L K + + + ++ EM GI +
Sbjct: 176 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVV 235
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + FC + + G L ++ + +P++ TYN L+ + CK+G++ +A + +M
Sbjct: 236 TYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM 295
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD++TY+TLM+G ++++A +F+ M G++PD+ SY LI +CK +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMV 355
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM + P T ++ G K GR+ +L+ E++ G+ + Y+ L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ A +L ++ G P + L++ LCK + DA +++ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY 475
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ Y +I C G EA++++ +M E+G +P++ ++IN + + +KAE
Sbjct: 476 HLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEK 535
Query: 542 LL 543
LL
Sbjct: 536 LL 537
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K L+ E++ F + G +V+ L+ G + + + + EM I P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+NIL CK G V + L + + PD++TY+TL+ Y L A +++
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V PD+ +YT L+NG CK V EA LF M + + P IV+Y++LI CK
Sbjct: 328 NAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ L+ EM GI + T ++ G K G L A+ L +++ G+ +
Sbjct: 388 GRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+ R A + + GY + YN ++ CK + +AL + +M +
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEE 507
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ T+ +I + +A L+ +M+ G+L
Sbjct: 508 NGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 167/365 (45%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P FN + F K ++E +G PDL+T N LI+ +C G++ F +
Sbjct: 57 PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ +R P +T+TTL+ GLC +G+V +A +++ +G+ D VSY TLI CK
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + L+ ++ G P+ I+ K + A L E+ G+S
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C ++ A LL + P++ YN L+++LCK V +A + M+
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+KP + TY L+ + + +A + + M G+ PD +LING+C K V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A L +K + +Y+++ + + G +S + +L G N +T +I
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416
Query: 598 HSLWK 602
L K
Sbjct: 417 DGLCK 421
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 204/434 (47%), Gaps = 10/434 (2%)
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
S A FN ++ PT + ++ IL + +F A + +LV+ K C
Sbjct: 46 SGDAFDLFNQAES-FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQ--KGCQLDRFA 102
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+ LI + + G + + + FR+ G +P + FL+N L K + +
Sbjct: 103 YNVLIRY-------FGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++ M G+ PN T+N+L F K G +D G +++ GF P +VTYN L+ +
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C GR+ A L+ M PD TY+TL+NGL K G+V EAH++F MV RG++ D+
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+YN+L+ K G M L+ EM G +PD F+ I+ GK + +A +
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G Y+ LI + + A +LE + + G++P + YN L+ L
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V +A + +EM +P + TY L+ G + A L +M + G+ PD+ V
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Query: 526 LINGYCMEKDVNKA 539
I+G + +++A
Sbjct: 456 RIDGLAFDDRLDEA 469
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 208/422 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + ++F F + P++ + L++ L+ ++ VY+++ + G
Sbjct: 39 AYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQL 98
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N+L F ++G +D +++ +G +PD TY L+++ K GR+ +A +
Sbjct: 99 DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P++ TY LM+ K G++ A LF M RG P +V+YN L+ A C
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA 218
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ ++ L ++M G+G PD++T +V G GK GR+ A + E+ GV++ Y
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ L + L++ + + G+ P +N +M++L K + A + MV+
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
KP L +Y LI + G + +A +++EM+E+G +P+++ LI+ + V++
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A A+L D +YN + +M + G+ + L ++ G P+ L+ I
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRID 458
Query: 599 SL 600
L
Sbjct: 459 GL 460
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 162/351 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G ++E+ F L+ G P+I + N L++ K+ +D ++ EM R G P
Sbjct: 144 ALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQP 203
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NIL C G V K+ +G PD TY+TL++ K GR+ +A ++
Sbjct: 204 SVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVF 263
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M R V DLV Y +L+ L K G + +L M +G PD S+NT++ A K
Sbjct: 264 REMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKA 323
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K ++ + M+ +G PD + I++ Y + G A ++ E+ G Y
Sbjct: 324 NKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTY 383
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L D + A ++LE + G P + YN LM+ L K A L +M D
Sbjct: 384 NSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKD 443
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ ++P +Y I R EA+ L +M G D + R+LI
Sbjct: 444 KGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 152/355 (42%), Gaps = 35/355 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
V G +D + L+++ EG T LI++Y + + DAF L+ P
Sbjct: 4 VLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSP 63
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ +T L++ L G+ A ++ ++V +G D +YN LI + + G++ + +
Sbjct: 64 TVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF 123
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G PD +T +V GK GR+ A R +D
Sbjct: 124 REMKIKGSEPDEYTYGFLVNALGKAGRVQEA---------------RSFFD--------- 159
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
++LER G P++ YN LM++ K + AL L EM R +PS+ TY
Sbjct: 160 -------AMLER----GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTY 208
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ C GR G A L +M G PDS L+NG V +A +
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ D +YN++ A+ G++ ++ +L K R GF P+ + ++ +L K
Sbjct: 269 RGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKA 323
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 196/403 (48%), Gaps = 1/403 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++VS N +++G + + + ++ EM + G+ P+ T++ CK +DK
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ GF+PD VTYN +I Y G+ + ++R M RR ++PD+ T + M+
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK GK +EA + F M +G PD+V+Y+ L+ Y EG + + +L M GNGI D
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ YGK G + A+ + ++Q GV Y +I A + R A
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFN 461
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI-KPSLSTYRALICCFCGI 498
++ G P +YN L++ C ++ A L EM+ R I +P+ + ++I C
Sbjct: 462 QMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKE 521
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR EA + D ++ G PD LI+GY + + KA +L D +Y
Sbjct: 522 GRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+A+ + + +G + + L + L G P +T ++H L+
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLF 624
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 230/512 (44%), Gaps = 11/512 (2%)
Query: 95 ISRVLLRC---QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
++ +LL+C S A+ +L ++P + +Y ++ L +++ A+ +L
Sbjct: 156 VANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHT 215
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+V+ C +V + +I + + G + ++ F + + G P +V+ +
Sbjct: 216 MVKKSGGCSPNVVSYNTVI-------HGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++ L K +D+ V +M G P+ T+N + H + G + G ++ G
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD+ T N+ +SS CK G+ +A + M + PDLVTY+ L++G EG V +
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLN 388
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
LF+ M G+ D YN LI AY K G M E+ + +M G+ PD +T ++ +
Sbjct: 389 LFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSL 450
+ GRL A++ ++ G+ +Y+ LI C A L+ + G P+
Sbjct: 449 RMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNT 508
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+N ++ SLCK V +A + D ++ +P + T+ +LI + +G+ +A ++D
Sbjct: 509 VFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDA 568
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ G+ PD L++GYC ++ L K T +Y + + DG
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + G + TC ++ L +
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 173/366 (47%), Gaps = 1/366 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L++ K +D+ ++ +M G+ P+ T+ + F + G + ++
Sbjct: 406 NILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV-LPDLVTYTTLMNGLCKEGKVR 327
G PD + YN+LI +C G L A L M R + P+ V + +++N LCKEG+V
Sbjct: 466 MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVV 525
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +F ++H G PD++++N+LI Y GKM+++ +L M+ GI PD T ++
Sbjct: 526 EAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + GR+ L L E+ GV + Y ++ L D R A + + + G
Sbjct: 586 DGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTT 645
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ ++ LC+ + +A+ L ++ N+K +++ +I + + EA L
Sbjct: 646 MDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANEL 705
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D + +G++P++ V+I E V +A+ + K + N + + E
Sbjct: 706 FDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLE 765
Query: 568 DGDLSK 573
G++SK
Sbjct: 766 KGEISK 771
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 190/425 (44%), Gaps = 42/425 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +E+ + F G +P +V+ + LL+G + ++ M GI +
Sbjct: 344 KHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHS 403
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+NIL + K G +D+ +++E G PD TY T+I+++ + GRL DA + M
Sbjct: 404 VYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQM 463
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS-PDIVSYNTLIFAYCKEGK 360
+ PD + Y +L+ G C G + +A +L M+ RG+ P+ V +N++I + CKEG+
Sbjct: 464 IAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGR 523
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E++ + ++ G PD T ++ GYG G++ A FGV
Sbjct: 524 VVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKA---------FGV--------- 565
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ + G P + Y+ L++ C+ + D L+L EM+ +
Sbjct: 566 -----------------LDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKG 608
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+KP+ TY ++ GR+ A + EM+ESG D C +++ G C ++A
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668
Query: 541 AL---LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AL LG KF I N + + + + EL G PN T MI
Sbjct: 669 ALFKKLGAMNVKFNI---AIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMI 725
Query: 598 HSLWK 602
+L K
Sbjct: 726 TNLLK 730
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 194/392 (49%), Gaps = 1/392 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G++ E+ F + + G P + ++ ++ + + +M +G+ P
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYL 297
+T +N L FC +G++ K + ++ G P+ V +N++I+S CK+GR+ +A +
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDI 530
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ ++ PD++T+ +L++G GK+ +A + M+ G+ PD+V+Y+ L+ YC+
Sbjct: 531 FDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR 590
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + L EM+ G+ P T T II+ G +GR + A + E+ G ++
Sbjct: 591 NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ LC++N A +L +++G ++ I N +++++ K +A L D +
Sbjct: 651 CGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSIS 710
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P+ STY +I G EA ++ M +SG P S++ +I + +++
Sbjct: 711 ATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEIS 770
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
KA L K + + + + ++F+ G
Sbjct: 771 KAGNYLSKVDGKTISLEASTASLMLSLFSRKG 802
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R LP + TY LM+ C+ + LF R + GL D++ N L+ C + +
Sbjct: 113 RVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDD 172
Query: 364 SKS-LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDY 420
+ + LL+ M G+ PDT + +++ ++ R AL+L+ + + S ++ Y+
Sbjct: 173 AVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNT 232
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ++ A +L + Q G VP + Y+ +++LCK ++ A L+ +M+
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P TY +I + +G+ E + EM G++PD C ++ C +A
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
A K D +Y+ + + +A +G + ++ L
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNL 389
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 130/297 (43%), Gaps = 16/297 (5%)
Query: 112 FFNWVKNDL----EIKPTSSNYCLIVHI------LAWN---NKFSFAMKMLCELVELVKD 158
FFN + N L + + L++HI + +N + + KM E V D
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKM--EKAFGVLD 567
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
SV + D+++ + + Y + G I + FR+ L G +P+ ++ +L+GL
Sbjct: 568 AMISVGIEPDVVTYSALLD-GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFND 626
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
++ EM G + T I+ C+N D+ +K+ ++
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAII 686
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NT+I + K + +A L+ + ++P+ TY ++ L KEG V EA +F M
Sbjct: 687 NTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEK 746
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
G +P N +I ++G++ ++ + L ++ G I + T +++ + ++G+
Sbjct: 747 SGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGK 803
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
K + ++ G I +C +L GL + NC D+ +++++G + + N N +
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
K ++ N + I G P+ TY +I++ K+G + +A ++ +M + P
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES-KSL 367
++ L ++G++ +A ++ + +S + + + ++ + ++GK +E KSL
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSL 811
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++E R P++ TY L+ C C R +L L++G+ D + +L+ C
Sbjct: 107 REEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCH 166
Query: 533 EKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRL--GFAPN 589
K + A +L + + DT SY+ V ED + ++L ++ G +PN
Sbjct: 167 AKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPN 226
Query: 590 NLTCKYMIHSLWKGME 605
++ +IH ++ E
Sbjct: 227 VVSYNTVIHGFFREGE 242
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 198/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y K G LN
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ VS+ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK+G++ + + +M+ + PD T ++ G K G L A +L+ E+ G+
Sbjct: 249 DGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G LM EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ K G IR + F G +PS+VS N L+NG +KL +++ +++ M G+ P
Sbjct: 145 SFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ V++ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK G +++A L + M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + L++ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + LD G P+ VS L++G K +D ++Y++M + P+ T+N L + CK
Sbjct: 229 FDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
NGD+ + + ++ +G PD +TY TLI CK+G L AF + M + N+ D V
Sbjct: 289 NGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT L++GLC+EG+ +A ++ M+ GL P+I +Y +I +CK+G + L+ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 373 GNGIYPDTFT 382
+G P T
Sbjct: 409 RDGYVPSVVT 418
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 158/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CKEG++R A +
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSV 158
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VS+NTL+ Y K G + E L M +G+ PD +T +++ G K
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCK 218
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E +L A L E+ G+ + + LI C+D R A + +++ P L
Sbjct: 219 ESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLIT 278
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L +EM + +KP TY LI C G A M+
Sbjct: 279 YNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L + +Y + N F + GD+
Sbjct: 339 KENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVW 398
Query: 573 KLMELQKRFLRLGFAPNNLT 592
+L K R G+ P+ +T
Sbjct: 399 TGSKLMKEMQRDGYVPSVVT 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+SV F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLV---PNSVS-FTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + EM G+ P+
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S CK + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + ++ S+ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+DG + ME+ K+ L +P+ +T +I+ L K + K
Sbjct: 251 HCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLK 293
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 202/385 (52%), Gaps = 12/385 (3%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
HS+ + LI+C C+ V GL K L +G +PSIV+ LLNGL
Sbjct: 98 HSLSI---LINCF--CHLHRVDFGL-----SVLSKILKLGLEPSIVTFTTLLNGLCMEGK 147
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+DQ +Y++M G+ PN +T+N++ + K+G ++ GFL+++E+ G P++V Y+T
Sbjct: 148 MDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYST 207
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI YC +G++++A ++ +M + P++ TYT+LMNG CK ++ EA QL + +G
Sbjct: 208 LIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKG 267
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L PDIV++ T+I C+ G+ ++ L + +G P+ T +++ G K G L A
Sbjct: 268 LVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAF 327
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L E+QR V + IY LI +LC+ + L R+ +G P++ Y L+ +L
Sbjct: 328 ALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGAL 387
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + +A L +M + P Y +I F A L++EM+ G D+
Sbjct: 388 CKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADA 447
Query: 521 QICRVLINGYCMEKDVNKAEALLGF 545
R L+N + D+ + L+GF
Sbjct: 448 AT-RALLNDF-PTNDIPALKTLIGF 470
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 198/405 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ +FR L P IV + L + ++++ + + +E+ +GI + H+ +IL
Sbjct: 45 DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC VD L KI + G +P +VT+ TL++ C +G+++ LY M R +
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQ 164
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++ TY ++N L K GK EA +M G P++V+Y+TLI YC G+M E++S+
Sbjct: 165 PNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSV 224
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ G P+ +T ++ GY K R+ A+ L+ E R G+ + +I LC+
Sbjct: 225 FDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCR 284
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
RP AA L I G+ P++ Y L++ LCK ++ +A L EM +KP+L
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVI 344
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G+ + L +++ G+ P+ L+ C E + +A L
Sbjct: 345 YTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ D +YN + F + D S +L + + GF+ + T
Sbjct: 405 EDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 35/330 (10%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P +V ++ L SS + G YL + + + D+ + + L+N C +V +
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ GL P IV++ TL+ C EGKM + L +M+ G+ P+ +T +I+ K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G+ AL + ++++ G VP++
Sbjct: 180 SGKANEALGFLKQMEKV-----------------------------------GCVPNVVN 204
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L++ C + +A + D MV + P++ TY +L+ +C I R EAV L+DE L
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL 264
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G++PD +I+G C A+ L + + +Y + + + G+L
Sbjct: 265 RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLE 324
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + R PN + +I SL K
Sbjct: 325 EAFALFQEMQRSTVKPNLVIYTILIDSLCK 354
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 198/395 (50%), Gaps = 3/395 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I + +F + L + PS V N LL + K+ + +M GI PN +T +I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 246 LTHVFC--KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + FC G + + +K+ EGF PD+VTY TLI+ CK G + A L M +
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+N P++ Y T+++ LCK+ +V EA LF MV +G+SPDI +YN+LI A C + +
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDYLI 422
+LL EM+ + I PD + +V KEG++ A ++V ++ QR G + Y+ LI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ R A L + + +P Y+ L+ LC + + DA+ L EMV +
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P+L TYR L+ C EA++L+ + S + PD Q+ + I+G C ++ A L
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+ K D +Y+ + N G L + +L
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 436
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 191/408 (46%), Gaps = 1/408 (0%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ ++ G I E+ F K + GF+P +V+ L+NGL K+ ++ M +
Sbjct: 105 SFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 164
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN +N + CK+ V + ++ +G PD+ TYN+LI + C
Sbjct: 165 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 224
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAY 355
L M ++PD+V++ T+++ LCKEGKV EAH + +M+ RG P+++SYNTLI Y
Sbjct: 225 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK ++ ++ L EM + PDT T ++ G RL A+ L E+ +
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y L+ LC++ A +LL+ I P +++ N ++ +C+ + A L
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ + ++P + TY +I C G EA L EM E+G + I + G+ +
Sbjct: 405 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 464
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
++A LL + D + M ++DG L ++ + F +
Sbjct: 465 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCK 512
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 183/390 (46%), Gaps = 3/390 (0%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N ID + M R+ P+T FN L K + +++ G P++
Sbjct: 37 LHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI 96
Query: 276 VTYNTLISSYC--KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
T + LI+S+C +G++ +A +L+ M PD+VTY TL+NGLCK G A +L
Sbjct: 97 YTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 156
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
MV + P++ +YNT+I + CK+ ++ E+ +L EM+ GI PD FT ++
Sbjct: 157 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 216
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER-IGQDGYVPSLEI 452
L+ E+ + ++ ++ ALC++ + A ++++ I + G +P++
Sbjct: 217 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVIS 276
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ CK + A+ L EM + + P TY LI C + R +A++L EM+
Sbjct: 277 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 336
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+P+ R+L++ C + + +A ALL D + N + G+L
Sbjct: 337 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 396
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L G P+ T MI+ L +
Sbjct: 397 AARDLFSNLSSKGLQPDVWTYSIMINGLCR 426
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 10/366 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y +++ L S A+++L +V+ K+C +V + +I + K
Sbjct: 130 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ--KNCQPNVFAYNTIID-------SLCK 180
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ E+F F + + G P I + N L++ L L + EM I P+ +
Sbjct: 181 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 240
Query: 243 FNILTHVFCKNGDVDKVNGFLEK-IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN + CK G V + + ++K I+ G P++++YNTLI+ YCK R++ A YL+ M
Sbjct: 241 FNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 300
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ ++PD VTY+TL++GLC ++++A LFH MV P++V+Y L+ CK +
Sbjct: 301 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 360
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +LL + G+ + PD I + G + G L +A +L L G+ Y +
Sbjct: 361 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 420
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ A+ L + ++G + IYN + + + + A+ L EMV R
Sbjct: 421 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 480
Query: 482 KPSLST 487
ST
Sbjct: 481 SADAST 486
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 3/330 (0%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+++N S ++ A + M R P V + L+ + K L H+
Sbjct: 27 LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 336 MVHRGLSPDIVSYNTLIFAYC--KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M G+ P+I + + LI ++C GK+ E+ L +M+G G PD T ++ G K
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G +A+ L+ + + + Y+ +I +LC+D + A +L + G P + Y
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ +LC L +EMVD I P + ++ ++ C G+ EA ++D+M++
Sbjct: 207 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 266
Query: 514 -SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G +P+ LINGYC + ++KA L G ++ I DT +Y+ + + L
Sbjct: 267 RGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 326
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + PN +T + ++ L K
Sbjct: 327 DAIALFHEMVACSQIPNLVTYRILLDYLCK 356
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 8/276 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D +I P ++ +V L K + A ++ ++++ C +V + LI+
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR-GGCMPNVISYNTLIN------- 282
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+ I ++ F + P V+ + L++GL + + ++ EM P
Sbjct: 283 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 342
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ IL CKN + + L+ IE DPD+ N I C+ G L A L+
Sbjct: 343 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 402
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + PD+ TY+ ++NGLC+ G + EA +LF M G + + YNT+ + +
Sbjct: 403 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 462
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+ + LL EM+ G D T + V+ +G
Sbjct: 463 NETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 498
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 198/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L+ + + K L ++V K + VF ++
Sbjct: 10 RHTLHSYCTMIHFLSTHQRI-LEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + FR T F +C +L L+KL W Y+E+
Sbjct: 69 FSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTLI+ Y + G L+
Sbjct: 129 ECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
F L M+ V PD+ T T L+NGLCKE K+ EA++LF+ M+ +GL P+ V++ TLI
Sbjct: 189 KGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ G PD T ++ G ++G L A +L+VE+ G+
Sbjct: 249 DGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A L +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC G A L+ EM G +P
Sbjct: 369 LREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 147/364 (40%), Gaps = 70/364 (19%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA +R+ + R VL L+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CKEG++R A +F + GL P +VS+NTLI Y +
Sbjct: 125 KEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRL 184
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + L M +G++PD +T +++ G
Sbjct: 185 GDLDKGFRLKTAMHASGVHPDVYTNTVLING----------------------------- 215
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LC++++ A L + G VP+ + L++ CK V AL + +M+
Sbjct: 216 ------LCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLR 269
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P L TY LI C G +A L+ EM G+ PD LI+G C E D+
Sbjct: 270 QGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLET 329
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L ++ D +Y A+ + ++G ++ + L +G P N T +I+
Sbjct: 330 AFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIIN 389
Query: 599 SLWK 602
K
Sbjct: 390 GFCK 393
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 192/382 (50%), Gaps = 8/382 (2%)
Query: 200 GFQPSIVSCNFLLNGLLK--------LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
G P +VS N +LNG K +D+ +V M + G+ P+ T+N + H +C
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+G + G L+K+ +G +P++VTY++L++ CK GR +A ++ M +R + PD+
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY TL+ G CKEG+V E+ +LF MV G+ PDI++YNTLI C GKM E+ LL M
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ G+ PD T ++ GY + R+ AL L E+ GVS + Y+ ++ L R
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 435
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
AA L I + G L YN ++ LCK + +AL + + +++ T+ +
Sbjct: 436 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 495
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I GR EA L +G++PD + ++ + + + + L +
Sbjct: 496 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 555
Query: 552 IYDTESYNAVFNMFAEDGDLSK 573
D+ N++ + GD+++
Sbjct: 556 SADSRMLNSIVRKLLQRGDITR 577
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 15/330 (4%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P HT+ IL C+ G +D L + ++GF D +T+ L+
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M +PD+ +Y L+ GLC E + +EA +L H M G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196
Query: 341 LSPDIVSYNTLIFAYCKEG--------KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
PD+VSYNT++ + KEG M ++ +L M+ NG+ PD T I+ GY
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G+ A+ + +++ GV + Y L+ LC++ R A + + + + G P +
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y L++ CK V ++ L D MV +KP + TY LI C G+ EA L+ M+
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
G+ PD LINGYC ++ A AL
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALAL 406
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 185/396 (46%), Gaps = 11/396 (2%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICPNTHTFNILTHV 249
R+ ++G P + S N LL GL N + ++ M G P+ ++N + +
Sbjct: 151 LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210
Query: 250 FCKNG--------DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F K G +DK L + + G PD +TYN+++ YC G+ +A + M
Sbjct: 211 FFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 270
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P++VTY++LMN LCK G+ EA ++F M RGL PDI +Y TL+ +CKEG++
Sbjct: 271 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRV 330
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
ES+ L M+ G+ PD T ++ G G++ A L+ + GV Y L
Sbjct: 331 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 390
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ +R A +L + + G P++ YN +++ L A A L +
Sbjct: 391 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 450
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ LSTY ++ C + EA+ + + + + +++ ++I +++A+
Sbjct: 451 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 510
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L + + D +Y+ + E G L +L +L
Sbjct: 511 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 546
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G +E+ T +K G +P++V+ + L+N L K + ++++ M + G+ P
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L CK G V + + + G PD++TYNTLI C G++++A L
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V PD+VTY TL+NG C+ ++ +A LF MV G+SP+I++YN ++
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +K L + +G + T II+ G K AL + L + + +
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ +I AL + R A L +G VP + Y+ + E+L + S+ +
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 542
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 162/384 (42%), Gaps = 33/384 (8%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF--LEKIEEEGFDPDLVTYN 279
+ V++E+ R G + + N ++ V+ + + + P + TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL-FHRMVH 338
LI C+ GRL+ F + ++ D +T+T L+ GLC + + +A + RM
Sbjct: 97 ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM---GNGIYPDTFTCQIIVQGYGKEGR 395
G PD+ SYN L+ C E + QE+ LL+ M G G PD + ++ G+ KEG
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG- 215
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A D A +L + ++G +P YN
Sbjct: 216 ----------------------IQTKLTAQAMDK----AMEVLNTMVKNGVMPDCMTYNS 249
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++ C +A+ +M ++P++ TY +L+ C GRS EA + D M + G
Sbjct: 250 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ PD R L+ G+C E V ++E L + D +YN + + G + +
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHS 599
+L + +G P+ +T +I+
Sbjct: 370 KLLASMVSVGVKPDIVTYGTLING 393
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G K + + ++++ M RIG+ P+
Sbjct: 291 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDII 350
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L C G +D+ L + G PD+VTY TLI+ YC+ R++DA L++ M
Sbjct: 351 TYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEM 410
Query: 302 YRRNVLPDLVTYTTLM-----------------------------------NGLCKEGKV 326
V P+++TY ++ +GLCK
Sbjct: 411 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLT 470
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA ++F + L + ++N +I A K G+M E+K L NG+ PD T ++
Sbjct: 471 DEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLM 530
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ ++G L +L + ++ G S + + ++ L Q
Sbjct: 531 AENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 571
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 212/451 (47%), Gaps = 40/451 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L + A +L E+ L+ C V+ F D++ +
Sbjct: 213 PDAVLYQTVIHALVAQGGVAEAATLLDEM--LLMGCAADVNTFNDVV-------LGLCGL 263
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW------------------ 225
G +RE+ + + + G PS+V+ FLL GL + D+ +
Sbjct: 264 GHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVI 323
Query: 226 -------------QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
++YE MG G P+ HT+NIL H CK G L+++EE+G
Sbjct: 324 RGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCA 383
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++VTY+TL+ S+C+ G +DA + M + + Y ++ L K+GK+ EA +L
Sbjct: 384 PNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRL 443
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G PDI +YNT+I+ C +M E++ + ++ G+ + T ++
Sbjct: 444 VQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLH 503
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR L L E+ G + Y+ LI ALC++ + LLE + G P+
Sbjct: 504 SGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFS 563
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK V DAL L EM+++ + P + TY LI C +G + A++L++++
Sbjct: 564 YNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLP 623
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ PD +LI+ +C + ++ A LL
Sbjct: 624 NENVHPDIVTYNILISWHCKVRLLDDASMLL 654
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 176/347 (50%), Gaps = 9/347 (2%)
Query: 151 ELVELV--KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
EL E++ K CP V + L+ K+G + + + + G P+IV+
Sbjct: 337 ELYEMMGSKGCPPDVHTYNILMH-------GLCKLGRCGSAVRMLDEMEEKGCAPNIVTY 389
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ LL+ + D + ++M G N+ +N + + K+G +D+ +++++
Sbjct: 390 STLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKS 449
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G PD+ TYNT+I C ++++A +++ + V+ + +TY TL++ L G+ +E
Sbjct: 450 QGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQE 509
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+L + MV G D+VSYN LI A CKEG + S LL EMM GI P+ F+ +++
Sbjct: 510 GLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLIN 569
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K G++ AL L E+ G++ Y+ LI LC+ AA +LLE++ + P
Sbjct: 570 ELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHP 629
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ YN L+ CK + DA +L D+ V I P+ T+ ++ F
Sbjct: 630 DIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNF 676
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/533 (24%), Positives = 235/533 (44%), Gaps = 52/533 (9%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C +D AL + + D + PT+ + + L + A+ +L + C
Sbjct: 160 CHAD---ALLLYRRMLRD-RVPPTTFTFGVAARALCRLGRARDALALLRGMAR--HGCVP 213
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
++Q +I A V G + E+ + L +G + + N ++ GL L +
Sbjct: 214 DAVLYQTVIH-------ALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHV 266
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++ + M G P+ T+ L C+ D+ L ++ E ++V NT+
Sbjct: 267 REAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTV 322
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I +G+L A LY +M + PD+ TY LM+GLCK G+ A ++ M +G
Sbjct: 323 IRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGC 382
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+P+IV+Y+TL+ ++C+ G +++++L +M G ++ I+ GK+G+L A+
Sbjct: 383 APNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMR 442
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS------------ 449
LV E++ G Y+ +I LC +++ A + + ++G V +
Sbjct: 443 LVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALL 502
Query: 450 ---------------------LEI--YNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
L++ YN L+++LCK +V +++L +EM+ + IKP+
Sbjct: 503 HSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNF 562
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+Y LI C G+ +A+ L EML G+ PD LING C + A LL
Sbjct: 563 SYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKL 622
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ D +YN + + + L L + + G PN T M+ +
Sbjct: 623 PNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQN 675
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 188/433 (43%), Gaps = 33/433 (7%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS S N +L+ L + +C +Y M R + P T TF + C+ G
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + G PD V Y T+I + +G + +A L M D+ T+ ++ GLC
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCG 262
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK------------------------- 357
G VREA +L RM+ G +P +V+Y L+ C+
Sbjct: 263 LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTV 322
Query: 358 ------EGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
EGK+ + LYEMMG+ G PD T I++ G K GR SA+ ++ E++ G
Sbjct: 323 IRGCLAEGKLARATE-LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + Y L+ + C++ A ++L+++ G+ + + YN ++ +L K + +A+
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAM 441
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM + KP + TY +I C + EA + +LE G++ + LI+
Sbjct: 442 RLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHAL 501
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ L D SYN + ++G++ + M L + + G PNN
Sbjct: 502 LHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNN 561
Query: 591 LTCKYMIHSLWKG 603
+ +I+ L K
Sbjct: 562 FSYNMLINELCKA 574
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 158/339 (46%), Gaps = 9/339 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++H L + A++ML E+ E K C ++ + L+ ++ +
Sbjct: 349 PDVHTYNILMHGLCKLGRCGSAVRMLDEMEE--KGCAPNIVTYSTLLH-------SFCRN 399
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G+ ++ + GF + N ++ L K +D+ ++ +EM G P+ T+
Sbjct: 400 GMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTY 459
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + C N +D+ + EEG + +TYNTLI + GR + L M
Sbjct: 460 NTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVL 519
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
D+V+Y L+ LCKEG V + L M+ +G+ P+ SYN LI CK GK+++
Sbjct: 520 HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ G+ PD T ++ G K G +ALNL+ +L V Y+ LI
Sbjct: 580 ALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS 639
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
C+ A+ LL++ G VP+ + ++++ +
Sbjct: 640 WHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVR 678
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 137/271 (50%), Gaps = 15/271 (5%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKV 183
S Y I++ L + K AM+++ E+ + C + + +I C D
Sbjct: 421 SQGYNGIIYALGKDGKLDEAMRLVQEMKS--QGCKPDICTYNTIIYHLCNND-------- 470
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP-NTHT 242
+ E+ F L+ G + ++ N L++ LL + ++ EM G CP + +
Sbjct: 471 -QMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG-CPLDVVS 528
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L CK G+VD+ LE++ +G P+ +YN LI+ CK G++ DA L + M
Sbjct: 529 YNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + PD+VTY TL+NGLCK G A L ++ + + PDIV+YN LI +CK +
Sbjct: 589 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ LL + + GI P+ T ++VQ + ++
Sbjct: 649 DASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 32/339 (9%)
Query: 294 AFYLYRIMYRR-NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A +L M RR V P +Y +++ L + +A L+ RM+ + P ++
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
A C+ G+ +++ +LL M +G PD Q ++ +G + A L+ E+ G +
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC--------- 463
+ ++ +++ LC A L++R+ G PS+ Y L+ LC+
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307
Query: 464 ----------------------DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+A A L + M + P + TY L+ C +GR
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
G AV ++DEM E G P+ L++ +C + A A+L + K +++ YN +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+DG L + M L + G P+ T +I+ L
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHL 466
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 204/425 (48%), Gaps = 3/425 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + + FK + G P I+ C L+ G ++ + V E + + G P+
Sbjct: 125 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L +CK+G++D L+ ++ PD+VTYNT++ + C G+L A +
Sbjct: 185 ITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
++ PD++TYT L+ CKE V +A +L M ++G PD+V+YN LI CKEG+
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L M G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ G P+ YN L+ CK + A+ D MV R
Sbjct: 362 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY L+ C G+ AV +++++ G P +I+G +A
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL +K D +Y+++ + + +G + + ++ LG PN +T ++ L
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541
Query: 601 WKGME 605
K +
Sbjct: 542 CKSRQ 546
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 192/391 (49%), Gaps = 3/391 (0%)
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
L L++ ++ ++ E M G P+ L FC+ G K +E +E+ G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD++TYN LIS YCK G +++A +++ R NV PD+VTY T++ LC GK+++A +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNAL---QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ R + + PD+++Y LI A CKE + ++ LL EM G PD T +++ G
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
KEGRL A+ + + +G + ++ ++ ++C R A LL + + G PS+
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ LC+ + A+ + ++M P+ +Y L+ FC + A+ +D M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ G PD L+ C + V+ A +L + K +YN V + ++ G
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ ++L R G P+ +T ++ L +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 191/412 (46%), Gaps = 9/412 (2%)
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
V + + + P Y I+ L + K AM++L +L K+C V + LI T
Sbjct: 206 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR--QLQKECYPDVITYTILIEAT-- 261
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
K + ++ K + + G +P +V+ N L+NG+ K +D+ + M G
Sbjct: 262 -----CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PN T NI+ C G L + +G P +VT+N LI+ C++G L A
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M P+ ++Y L++G CKE K+ A + MV RG PDIV+YNTL+ A
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK+GK+ + +L ++ G P T ++ G K G+ A+ L+ E++R G+
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y L+ L ++ + A + G P+ YN +M LCK A+
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
M+ + KP+ +TY LI G + EA+ L++E+ G++ S +V +
Sbjct: 557 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 206/445 (46%), Gaps = 39/445 (8%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D+I CT + ++G +++ G P +++ N L++G K ID QV
Sbjct: 148 DIIPCTSLIR-GFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ R+ + P+ T+N + C +G + + L++ ++ PD++TY LI + CK
Sbjct: 207 LD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 263
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ + A L M + PD+VTY L+NG+CKEG++ EA + + M G P++++
Sbjct: 264 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 323
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N ++ + C G+ +++ LL +M+ G P T I++ ++G L A++++ ++
Sbjct: 324 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 383
Query: 408 RFG-----------------------------VSISR----DI--YDYLIVALCQDNRPF 432
G + +SR DI Y+ L+ ALC+D +
Sbjct: 384 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 443
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A +L ++ G P L YN +++ L K A+ L DEM + +KP + TY +L+
Sbjct: 444 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G+ EA+ ++ G+ P++ ++ G C + ++A L + K
Sbjct: 504 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 563
Query: 553 YDTESYNAVFNMFAEDGDLSKLMEL 577
+Y + A +G + ++L
Sbjct: 564 PTEATYTILIEGIAYEGLAKEALDL 588
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P IV+ N LL L K +D ++ ++ G P T+N + K G ++
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ +G PD++TY++L+S ++G++++A + + + P+ +TY ++M G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK + A M+ + P +Y LI EG +E+ LL E+ G+
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 600
Query: 380 TFTCQIIVQ 388
+ Q+ V+
Sbjct: 601 SSAEQVAVK 609
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 220/466 (47%), Gaps = 9/466 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y +V K + A +L E++ P+ + ++ +LI
Sbjct: 346 LKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQ-PNKI-MYDNLIR-------GLC 396
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + K + + VG +P + + L+ G + D +++ EM GI PN +
Sbjct: 397 KIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAY 456
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ I+ + C+NG+ + LE++ EG P+ Y LI + K+G ++ A M
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ NVLPDL Y +L+ GL G++ EA + + ++ RGL PD +Y+ LI YCK +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ LL +M+ +G+ P+ T +++GY K +++ + G IY +
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I L + A +L + ++G VP L IY+ L+ LCK + A+ L DEM +
Sbjct: 637 IRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGL 696
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + Y ALI FC G A ++ D +L G+LP+ LI+G C D+ A
Sbjct: 697 EPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFD 756
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
L + D YN + ++ DL + + L + G+A
Sbjct: 757 LYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA 802
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 154/614 (25%), Positives = 269/614 (43%), Gaps = 69/614 (11%)
Query: 56 QNPNKIVDLICSSLKK--GDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA---L 110
++P+ + + + L + GD L + +D+ L +S ++ R +S S+ L
Sbjct: 45 EDPDAVAAEVATLLSRCAGDWKLAIAASDIPS---RLSPDAVSCLICR-RSHSLHPKLLL 100
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
FF W + + P++ + + L + F A +L +++ L PH V +
Sbjct: 101 DFFYWSRPRIA-PPSADAFARLAASLCAASHFPQANGLLHQMI-LAH--PHPPLVLASIQ 156
Query: 171 SCTEDCNW-------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+D + Y K G +R + + D+G P+ CN L
Sbjct: 157 RAIQDSDARSPSPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGL 216
Query: 212 LNGLLKLNCIDQCWQ-----------------------------------VYEEMGRIGI 236
L LL+ + ++ W+ V+EEM R
Sbjct: 217 LKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDC 276
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
N T+N++ C++G V++ GF E++ + G PD TY L++ CK GRL +A
Sbjct: 277 AMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKA 336
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L M + P++V Y TL++G KEGK EA + + M+ G+ P+ + Y+ LI C
Sbjct: 337 LLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G++ + LL EM+ G PDTFT ++QG+ + A L+ E++ G+ +
Sbjct: 397 KIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAY 456
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y +I LCQ+ A +LLE + +G P+ +Y L+ K ++ A + M
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
N+ P L Y +LI +GR EA ++ + G++PD LI+GYC +++
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNL 576
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
KA+ LL + ++Y + + + D K+ + + L G P+N +
Sbjct: 577 EKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIV 636
Query: 597 IHSLWKG--MERKF 608
I +L + ME F
Sbjct: 637 IRNLSRSENMEVAF 650
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 222/488 (45%), Gaps = 9/488 (1%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+S +V F D + P + Y +++ L + A +L E+
Sbjct: 291 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS--CSGLKP 348
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V V+ L+ ++K G E+F + + G QP+ + + L+ GL K+ +
Sbjct: 349 NVVVYATLVD-------GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQL 401
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++ EM ++G P+T T++ L ++ D D L ++ G P+ TY +
Sbjct: 402 GRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ C+ G +A L M + P+ Y L+ G KEG + A + M +
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV 521
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+ YN+LI G+++E++ ++ G+ PD FT ++ GY K L A
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ ++ G+ + D Y L+ + N +S+L+ + G P IY ++ +L
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 641
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +++ A ++ E+ + P L Y +LI C + +AV L+DEM + G+ P
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIV 701
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+G+C D+++A + K + + +Y A+ + ++GD++ +L K
Sbjct: 702 CYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDM 761
Query: 582 LRLGFAPN 589
L G AP+
Sbjct: 762 LDRGIAPD 769
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 187/416 (44%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E+ + G +P++V L++G +K + + + EM G+ PN
Sbjct: 327 KGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKI 386
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ L CK G + + + L ++ + G PD TY+ L+ + + + AF L M
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+LP+ TY ++NGLC+ G+ +EA L M+ GL P+ Y LI + KEG +
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L M + PD F +++G GR+ A ++Q+ G+ Y L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ A LL+++ G P+ + Y +L+E K + + M+
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP Y +I A ++ E+ ++G++PD I LI+G C D+ KA
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LL AK+ YNA+ + F GD+S+ + L G PN +T +I
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALI 742
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 36/333 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + ++ + ++ L+ G +P+ + LL G K N ++ + + M G P
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H + I+ ++ +++ L ++E+ G PDL Y++LIS CK + A L
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P +V Y L++G C+ G + A +F ++ +GL P+ V+Y LI CK
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ L +M+ GI PD F ++ G L AL L E+
Sbjct: 749 GDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF----------- 797
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
NR +A SL ++ L+ CK + + L M+D
Sbjct: 798 ----------NRGYAHVSL---------------FSTLVRGFCKRGRLQETEKLLHVMMD 832
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
R I P+ T +I F G+ EA + E+
Sbjct: 833 REIVPNAQTVENVITEFGKAGKLCEAHRVFAEL 865
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E++ + LD G P N L+ +++ + V++EM R G+ P TFN
Sbjct: 95 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 154
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK D++ N + + G PD+ TY I CK GR+ DA ++ M R
Sbjct: 155 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P+ V TTL++ CKEG V +L M RG+ D+V+YN L+ +C+ M+ +
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 274
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
++ EM +G+ PD T ++ G KEG L +A+ + E+ GV++ Y LI L
Sbjct: 275 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 334
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ R A +L + + G P Y ++++ CK V EM ++ P +
Sbjct: 335 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 394
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY ++ FC +G+ A L++ ML G+ P+ +L++G+C V E L
Sbjct: 395 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEEL--- 451
Query: 546 FAKKFQIYDTESYNAVFNMFAE 567
+ K + D Y ++ N F +
Sbjct: 452 KSAKGMVSDFGVYTSLINEFVK 473
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 183/413 (44%), Gaps = 38/413 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y GL+ + L G + + + + L+N +L + + + Y + G+ P
Sbjct: 57 YADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPE 113
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
FN+L ++G + +++ G P +VT+NTL+S CK LN+A L
Sbjct: 114 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 173
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + + PD+ TY + GLCK G++++A ++F M RGL+P+ V TLI A+CKEG
Sbjct: 174 LMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 233
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ L +EM G+ D +V G+ + R + A N +VE R
Sbjct: 234 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRV-RDMKAANDIVEEMR----------- 281
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+DG P Y L++ CK + A+ +K EM D
Sbjct: 282 -----------------------KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDE 318
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY ALI GRS +A ++ EM+E+G+ PD+ ++I+ +C DV
Sbjct: 319 GVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTG 378
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L K + +YN V N F G + L L +G PN++T
Sbjct: 379 FKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDIT 431
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 7/325 (2%)
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
Y +G L D L + RR + + ++ LMN L V EA+ + ++ G+ P+
Sbjct: 57 YADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS---VPEAYAFYLHLLDAGVPPE 113
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+N L+ + GK+ ++++ EM+ G+ P T ++ G K L +A L
Sbjct: 114 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 173
Query: 405 ELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ + G I+ D+Y Y I LC+ R A + E + + G P+ + L+++ CK
Sbjct: 174 LMAKAG--IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCK 231
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
V L L+ EM R +K L Y AL+ FC + A +++EM + G+ PD
Sbjct: 232 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 291
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI+G C E +++ A + + + D +Y A+ + ++ G + +
Sbjct: 292 YTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 351
Query: 583 RLGFAPNNLTCKYMIHSLWKGMERK 607
G P+N T +I + K + K
Sbjct: 352 EAGLQPDNTTYTMVIDAFCKNGDVK 376
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G ++ FK ++ + G P IV+ N ++NG L + + M IG+CP
Sbjct: 368 AFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCP 427
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
N T+NIL CK+G KV E +G D Y +LI+ + KK
Sbjct: 428 NDITYNILLDGHCKHG---KVRDTEELKSAKGMVSDFGVYTSLINEFVKK 474
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E++ + LD G P N L+ +++ + V++EM R G+ P TFN
Sbjct: 223 VPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNT 282
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK D++ N + + G PD+ TY I CK GR+ DA ++ M R
Sbjct: 283 LMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P+ V TTL++ CKEG V +L M RG+ D+V+YN L+ +C+ M+ +
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAAN 402
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
++ EM +G+ PD T ++ G KEG L +A+ + E+ GV++ Y LI L
Sbjct: 403 DIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGL 462
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ R A +L + + G P Y ++++ CK V EM ++ P +
Sbjct: 463 SKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGI 522
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY ++ FC +G+ A L++ ML G+ P+ +L++G+C V E L
Sbjct: 523 VTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELK-- 580
Query: 546 FAKKFQIYDTESYNAVFNMFAE 567
+ K + D Y ++ N F +
Sbjct: 581 -SAKGMVSDFGVYTSLINEFVK 601
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 183/413 (44%), Gaps = 38/413 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y GL+ + L G + + + + L+N +L + + + Y + G+ P
Sbjct: 185 YADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMN---RLPSVPEAYAFYLHLLDAGVPPE 241
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
FN+L ++G + +++ G P +VT+NTL+S CK LN+A L
Sbjct: 242 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 301
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + + PD+ TY + GLCK G++++A ++F M RGL+P+ V TLI A+CKEG
Sbjct: 302 LMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 361
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ L +EM G+ D +V G+ + R + A N +VE R
Sbjct: 362 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRV-RDMKAANDIVEEMR----------- 409
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+DG P Y L++ CK + A+ +K EM D
Sbjct: 410 -----------------------KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDE 446
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY ALI GRS +A ++ EM+E+G+ PD+ ++I+ +C DV
Sbjct: 447 GVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTG 506
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L K + +YN V N F G + L L +G PN++T
Sbjct: 507 FKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDIT 559
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 147/325 (45%), Gaps = 7/325 (2%)
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
Y +G L D L + RR + + ++ LMN L V EA+ + ++ G+ P+
Sbjct: 185 YADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS---VPEAYAFYLHLLDAGVPPE 241
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+N L+ + GK+ ++++ EM+ G+ P T ++ G K L +A L
Sbjct: 242 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 301
Query: 405 ELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ + G I+ D+Y Y I LC+ R A + E + + G P+ + L+++ CK
Sbjct: 302 LMAKAG--IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCK 359
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
V L L+ EM R +K L Y AL+ FC + A +++EM + G+ PD
Sbjct: 360 EGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVT 419
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI+G C E +++ A + + + D +Y A+ + ++ G + +
Sbjct: 420 YTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMM 479
Query: 583 RLGFAPNNLTCKYMIHSLWKGMERK 607
G P+N T +I + K + K
Sbjct: 480 EAGLQPDNTTYTMVIDAFCKNGDVK 504
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y ++ L+ + A ++LCE++E + D + T + A+ K G ++
Sbjct: 454 TYTALISGLSKAGRSVDAERILCEMME--------AGLQPDNTTYTMVID-AFCKNGDVK 504
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
FK ++ + G P IV+ N ++NG L + + M IG+CPN T+NIL
Sbjct: 505 TGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILL 564
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
CK+G KV E +G D Y +LI+ + KK
Sbjct: 565 DGHCKHG---KVRDTEELKSAKGMVSDFGVYTSLINEFVKK 602
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 190/391 (48%), Gaps = 1/391 (0%)
Query: 214 GLLKLNCIDQCWQVYEEMG-RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
G K I++ + EEM R G P+ +TFN+L + K G V ++ + EGFD
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+ TYN+LIS CK G +++A + M R+ P+ VTY T+++ LCKE +V EA +L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ +G+ PD+ +YN+LI C + L EM G +PD FT +++
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G+L ALNL+ E++ G + + Y+ LI C++ R A + +++ G +
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L++ LCK + V +A L D+M+ ++P TY +L+ FC G +A ++ M
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G PD LI G C V A LL K +YN V
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSK 633
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + L + + AP+ +T K + L +G
Sbjct: 634 EAVRLFREMIEKAEAPDAVTYKIVFRGLCQG 664
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 196/412 (47%), Gaps = 2/412 (0%)
Query: 179 AYVKVGLIRESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ K G I E+ + + +L GF P + N L+NGL K + +V + M R G
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ +T+N L CK G+VD+ L ++ E P+ VTYNT+IS+ CK+ ++ +A L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ + +LPD+ TY +L+ GLC A +L+ M +G PD +YN LI + C
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
GK+QE+ +LL EM +G + T ++ G+ K R+ A + +++ GVS +
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI LC+ R A+ L++++ +G P YN L+ CK + A + M
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMA 573
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+P + TY LI C GR A L+ + G+ +I K
Sbjct: 574 SDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSK 633
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAP 588
+A L +K + D +Y VF + G + + ++ L G+ P
Sbjct: 634 EAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVP 685
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 36/374 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ + + L GF P I + N L++GL KL +D+ +V +M PNT
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372
Query: 242 TFNILTHVFCKNGDVDKVN---------GFL--------------------------EKI 266
T+N + CK V++ G L +++
Sbjct: 373 TYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM 432
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ +G PD TYN LI S C +G+L +A L + M +++TY TL++G CK ++
Sbjct: 433 KTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRI 492
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA ++F +M +G+S + V+YNTLI CK +++E+ L+ +M+ G+ PD FT +
Sbjct: 493 AEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ + K G + A ++V + G Y LI LC+ R AAT LL I G
Sbjct: 553 LTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC-GIGRSGEAV 505
+ YN ++++L + +A+ L EM+++ P TY+ + C G G GEAV
Sbjct: 613 NLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAV 672
Query: 506 SLMDEMLESGMLPD 519
+ EMLE G +P+
Sbjct: 673 DFVMEMLERGYVPE 686
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 212/450 (47%), Gaps = 25/450 (5%)
Query: 107 VSALTFFNWVKNDLEI---------KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
V+ L+ VK+ LE+ P Y ++ L + A+K+L +++E +
Sbjct: 308 VNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE--R 365
Query: 158 DCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
DC + + +IS C E+ K+ L+ G P + + N L+ GL
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTG---------KGILPDVCTYNSLIQGL 416
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++Y+EM G P+ T+N+L C G + + L+++E G ++
Sbjct: 417 CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNV 476
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+TYNTLI +CK R+ +A ++ M + V + VTY TL++GLCK +V EA QL +
Sbjct: 477 ITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQ 536
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ GL PD +YN+L+ +CK G ++++ ++ M +G PD T ++ G K GR
Sbjct: 537 MIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGR 596
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ +A L+ +Q G++++ Y+ +I AL + R A L + + P Y
Sbjct: 597 VEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKI 656
Query: 456 LMESLCKCDS-VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ LC+ + +A+ EM++R P S++ L + G + L+D ++E
Sbjct: 657 VFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEK 716
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLG 544
D+++ +I G+ A A LG
Sbjct: 717 AKFSDNEV--TMIRGFLKISKYQDALATLG 744
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/561 (25%), Positives = 248/561 (44%), Gaps = 39/561 (6%)
Query: 39 SEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRV 98
+ HK SN +F P LT N L P+ ++
Sbjct: 20 ASHKPTSNSTLSFATTNHEP-----------------LTTTTNSATRLSPNFTPTQLLHS 62
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
L R + DS + + F W KP+SS + ++H L +F AMK +++K+
Sbjct: 63 LRR-EEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFD-AMK------DILKE 114
Query: 159 CPHSVDVFQD--LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS----CNFLL 212
S+ V + L+ E +Y GL E + F ++V F +V+ NFLL
Sbjct: 115 MKISLSVIDNDSLLVFIE----SYASFGLYNEILQ-FVDAMEVEF--GVVANTHFYNFLL 167
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N L+ N + + M GI P+ TFNIL C+ + +E++E+ G
Sbjct: 168 NVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLL 227
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD T+ T++ + ++G L+ A + M + VT L+NG CKEG++ EA +
Sbjct: 228 PDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRF 287
Query: 333 FHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
M R G PD ++N L+ K G ++ + ++ M+ G PD +T ++ G
Sbjct: 288 IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC 347
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K G + A+ ++ ++ S + Y+ +I LC++N+ AT L + G +P +
Sbjct: 348 KLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVC 407
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
YN L++ LC + A+ L EM + P TY LI C G+ EA++L+ EM
Sbjct: 408 TYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
SG + LI+G+C K + +AE + + ++ +YN + + + +
Sbjct: 468 EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERV 527
Query: 572 SKLMELQKRFLRLGFAPNNLT 592
+ +L + + G P+ T
Sbjct: 528 EEASQLMDQMIMEGLRPDKFT 548
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K + +F F L+ G ++ + N LL+ L K +++ +++E+ GI P
Sbjct: 224 GYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++N + C+ +++ +++ + GF P+ VT+ L+ Y KKG + +AF ++
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M N+LP T ++ GLCK G+ E LF++ V +G P + YNT+I + KE
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + ++ EM GI P T T ++ G+ K + AL L+ +++R G+ + Y
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ +A LL + G P+ IYN ++ ++V +A+ L +MV+
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I L TY +LI GR A + EML G+LPD + VLING C +
Sbjct: 523 EGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFEN 582
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A +L K I YN + ++G+L + L L G P+N+T +++
Sbjct: 583 ARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642
Query: 599 SLWKG 603
+KG
Sbjct: 643 GKFKG 647
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 191/434 (44%), Gaps = 1/434 (0%)
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I C A V+ + E+ + K L VG + + +L LK I + Q +
Sbjct: 5 IQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFL 64
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+ G+ + ++I H+ C + L ++ G+ P T+ ++I++ K+G
Sbjct: 65 QAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEG 124
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +A L M +L T+LM G C +G +R A L + + GL P+ V+Y+
Sbjct: 125 NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYS 184
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI CK G ++++ EM GI ++ I++GY K +A + +
Sbjct: 185 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES 244
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G++ + ++ L+ LC++ + A +L + + G P++ YN ++ C+ D++ A
Sbjct: 245 GLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA 303
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ EM+D P+ T+ L+ + G A S+ M ++ +LP ++I G
Sbjct: 304 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 363
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C + L F + + YN + + F ++G+++ + + +G P+
Sbjct: 364 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPS 423
Query: 590 NLTCKYMIHSLWKG 603
+T +I KG
Sbjct: 424 TVTYTSLIDGFCKG 437
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%)
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
++P I N L+ A ++ E++ L +M+ G+ D FT ++++ KEG +L A
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + GV + ++ Y + LC A SLL + G++P + ++ +
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
K +VA+AL LKD+MV+ +L+ +L+ +C G A+ L++E+ ESG++P+
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 521 QICRVLINGYCMEKDVNKA 539
VLI+G C ++ KA
Sbjct: 181 VTYSVLIDGCCKNGNIEKA 199
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 204/416 (49%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP + + ++NGL K ID + ++M + I N +N +
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK +D K+E +G PD+ TYN+LIS C GR +DA L M R +
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VT+ +L++ KEGK+ EA +LF M+ R + P+IV+YN+LI +C ++ E++ +
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ PD T +++G+ K R+ + L E+ + G+ + Y+ LI L Q
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + +++ DG P + Y+ L++ LCK + AL++ + + ++P++ T
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ I +I+G+C + +A+AL
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + D+ YN + DGD + EL K GF + T +I+ L G
Sbjct: 564 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 619
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 218/451 (48%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP + + ++H L +NK S A+ ++ +V + C + + +++ K
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMV--ARGCQPDLFTYGTVVN-------GLCK 233
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I + +K + ++V N +++GL K +D + ++ +M GI P+ T
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L C G + L + E +P++VT+N+LI ++ K+G+L +A L+ M
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ P++VTY +L+NG C ++ EA Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E L EM G+ +T T ++QG + G A + ++ GV Y L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ + A + E + + P++ YN ++E +CK V D L + + +K
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ Y +I FC G EA +L EM E G LPDS LI + D + L
Sbjct: 534 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAEL 593
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + + V NM DG L K
Sbjct: 594 IKEMRSCGFVGDASTISMVINML-HDGRLEK 623
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 200/400 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D + E+M +GI N +T++IL + FC+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R+++A L M PD VT+ TL++GL
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG PD+ +Y T++ CK G + + SLL +M I +
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + A +L +++ G+ Y+ LI LC R A+ LL +
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L DEM+ R+I P++ TY +LI FC R
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + M+ LPD LI G+C K V + L +++ + +T +YN +
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD ++ K+ + G P+ +T ++ L K
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 478
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 225/485 (46%), Gaps = 10/485 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L PH+ + L++C C + + +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL--GIPHNHYTYSILLNCF--CRRSQLPL 134
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L K + +G++P IV+ + LLNG I + + ++M +G P+T TF
Sbjct: 135 AL-----AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTF 189
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H + + ++++ G PDL TY T+++ CK+G ++ A L + M +
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 249
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++V Y T+++GLCK + +A LF++M +G+ PD+ +YN+LI C G+ +
Sbjct: 250 GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSD 309
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL +M+ I P+ T ++ + KEG+L+ A L E+ + + + Y+ LI
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C +R A + + +P + YN L++ CK V + + L EM R +
Sbjct: 370 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 429
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY LI G A + +M+ G+ PD +L++G C + KA +
Sbjct: 430 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 489
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WK 602
+ K + +YN + + G + +L G PN + MI K
Sbjct: 490 EYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 549
Query: 603 GMERK 607
G++ +
Sbjct: 550 GLKEE 554
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
NGL +L +D ++ EM + P+ F+ L K D V E+++ G
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ TY+ L++ +C++ +L A + M + PD+VT ++L+NG C ++ EA L
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+MV G PD V++NTLI K E+ +L+ M+ G PD FT +V G K
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + AL+L+ ++++ + + IY+ +I LC+ A L ++ G P +
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LC +DA L +M++R I P++ T+ +LI F G+ EA L DEM+
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P+ LING+CM +++A+ + K + D +YN + F + +
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ MEL + + G N +T +I L++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 164/339 (48%), Gaps = 10/339 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A FN ++ IKP Y ++ L ++S A ++L +++E + +V F
Sbjct: 275 AFDLFNKMETK-GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE--RKINPNVVTFNS 331
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A+ K G + E+ K F + + P+IV+ N L+NG + +D+ Q++
Sbjct: 332 LID-------AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M P+ T+N L FCK V++ ++ + G + VTYNTLI +
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 444
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + A +++ M V PD++TY+ L++GLCK GK+ +A +F + + P+I +Y
Sbjct: 445 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTY 504
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I CK GK+++ L + G+ P+ ++ G+ ++G A L E++
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G Y+ LI A +D A+ L++ + G+V
Sbjct: 565 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 603
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 10/275 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +++ +++ A ++ +V KDC V + LI +
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS--KDCLPDVVTYNTLIK-------GFC 407
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + E + FR+ G + V+ N L+ GL + D +++++M G+ P+
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL CK G ++K E +++ +P++ TYN +I CK G++ D + L+ +
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++ YTT+++G C++G EA LF M G PD YNTLI A ++G
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
S L+ EM G D T +++ +GRL
Sbjct: 588 AASAELIKEMRSCGFVGDASTISMVINML-HDGRL 621
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F +P+I + N ++ G+ K ++ W ++ + G+ PN
Sbjct: 478 KYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 537
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + FC+ G ++ + +++E+G PD YNTLI + + G + L + M
Sbjct: 538 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D T + ++N L +G++ +++
Sbjct: 598 RSCGFVGDASTISMVINML-HDGRLEKSY 625
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 207/430 (48%), Gaps = 8/430 (1%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM------GRIGICPN 239
I E+ + F + +G P +V+ L+ GL I+ ++++EM I PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+NI+ CK G D+ E+++ +G P +++YN+LI +C G+ ++ L
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+VT+ L++ LCKEGKV EA +L M+ G+ PD+V+YN+LI +C G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ L M G PD + +++ GY K ++ A+ L E+ G + YD
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ + + A L + G + Y ++ LCK D + +A+ L E+
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 454
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N K + LI C G+ A L +++ G P+ ++I+G+C E V+KA
Sbjct: 455 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L+ D +YN + F E L ++++L R + +P+ +TC ++
Sbjct: 515 NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDM 574
Query: 600 LWKGMERKFQ 609
L K + K+Q
Sbjct: 575 LSK--DEKYQ 582
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 227/458 (49%), Gaps = 3/458 (0%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ L ++ S A ++ + +L C V + LI + +
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKL--GCTPDVVTYGTLIKGLCGTGNINIAL 194
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L +E + ++ +P++++ N +++GL K+ D+ Q++EEM G+ P+ ++
Sbjct: 195 KLHQEMLNDISR-YEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISY 253
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H FC G ++ L+++ ++G PD+VT+N LI + CK+G++ +A L +M
Sbjct: 254 NSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 313
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++PDLVTY +L+ G C G + A +LF M +G PD++SYN LI Y K K++E
Sbjct: 314 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 373
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM+ G P+ T +++G G++ A L ++ G++ + Y +
Sbjct: 374 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 433
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+++ F A L + + +E N L++ LCK + A L +++ + +P
Sbjct: 434 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 493
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY +I FC G+ +A L+ +M +G PD L+ G+ + + LL
Sbjct: 494 NVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLL 553
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
A+K D + + V +M ++D + + L RF
Sbjct: 554 HRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 166/370 (44%), Gaps = 33/370 (8%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNG--FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PN L H CK G+V + F + P L ++N L+S K + F
Sbjct: 32 PNPQIAFFLRH--CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVF 89
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
LY M + D T L+N LC ++RE F ++ RG SP+IV+YNTLI
Sbjct: 90 SLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGL 149
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C E ++ E+ L M G PD T +++G G + AL L E+
Sbjct: 150 CMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLN------- 202
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
DI Y I C+ P++ YN +++ LCK +A L +E
Sbjct: 203 DISRYEIN--CK--------------------PNVITYNIIVDGLCKVGREDEAKQLFEE 240
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + + PS+ +Y +LI FC G+ E+ L+DEML+ G+ PD VLI+ C E
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V +A+ LLG + + D +YN++ F GDL+ EL G P+ ++
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360
Query: 596 MIHSLWKGME 605
+I+ K ++
Sbjct: 361 LINGYSKTLK 370
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 215/455 (47%), Gaps = 18/455 (3%)
Query: 164 DVFQDLI---SCTEDCNWAYVKVGLIRESF-----KTFRKTLDVGFQPSIVSCNFLLNGL 215
D+F ++I + E + GL RE + K +++ QP++V+ L+N +
Sbjct: 291 DLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHM 350
Query: 216 LKLNCIDQCWQVYEEMG--------RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
K +D +V E+M + + P+ +N L CK G + G +E++
Sbjct: 351 CKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMR 410
Query: 268 -EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
++G PD +TYN LI +CK G + L+ M + V P++VT TL+ G+C+ G+V
Sbjct: 411 SQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRV 470
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A F RG+ D V+Y LI A+C +++ L EM+ +G PD +
Sbjct: 471 SSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTL 530
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ + GR+ A ++ EL++ G+ Y+ LI C+ N+ +L+ + + G
Sbjct: 531 ISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGL 590
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P YN L+ K + A + +M+ + P+++TY A+I +C G EA+
Sbjct: 591 KPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAME 650
Query: 507 LMDEM-LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ +M S + P++ I +LIN C V A +L+ +T +YNA+F
Sbjct: 651 IFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGL 710
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ DL K+ E R + P+ +T + + L
Sbjct: 711 RDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWL 745
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 185/387 (47%), Gaps = 44/387 (11%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++ W ++ EM ++G + N L + G+ +++N +EK+ E P++VT+ L
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346
Query: 282 ISSYCKKGRLNDAFYLYRIM--------YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
I+ CK R++DA + M +V PD+V Y TL++GLCK G+ +E L
Sbjct: 347 INHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLM 406
Query: 334 HRM-VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
RM +G +PD ++YN LI +CK G++++ K L EM G+ P+ T +V G +
Sbjct: 407 ERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCR 466
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR+ SA+N VE QR G+ Y LI A C N + ++E+
Sbjct: 467 TGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVN---------------NFEKAMEL 511
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+NE+++S C D++ Y LI F GR +A ++ E+
Sbjct: 512 FNEMLKSGCSPDAIV--------------------YYTLISGFSQAGRMADASFVLAELK 551
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ G+ PD+ LI G+C ++ +L + DT +YN + +++GDL
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ ++ ++ G P T +I++
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINA 638
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 1/322 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G I + + F + G P++V+ N L+ G+ + + + E R G+
Sbjct: 428 GFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKG 487
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L + FC + +K ++ + G PD + Y TLIS + + GR+ DA ++
Sbjct: 488 DAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVL 547
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + PD V Y TL+ G C+ K ++ M GL PD ++YNTLI K
Sbjct: 548 AELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKN 607
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG-VSISRDI 417
G ++ ++ ++ +M+ G+ P T ++ Y G A+ + +++ V + I
Sbjct: 608 GDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVI 667
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI +LC++N+ +A SL+E + G P+ YN + + L + D M+
Sbjct: 668 YNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMI 727
Query: 478 DRNIKPSLSTYRALICCFCGIG 499
+ P T L +G
Sbjct: 728 EHACNPDYITMEILTEWLSAVG 749
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 187/447 (41%), Gaps = 54/447 (12%)
Query: 181 VKVGLIRESFKT----FRKTLDVGFQPSIVSCNFLLNGLLK------LNCIDQCWQVYEE 230
++ G ++++ K F D +P+ + + L + LLK L D+ + +
Sbjct: 201 LRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLK 260
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
G G+ ++ L C+N ++ ++ + G + N+L++ ++G
Sbjct: 261 FGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGN 320
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM--------VHRGLS 342
N L M ++ P++VT+ L+N +CK +V +A ++ +M + +
Sbjct: 321 FNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVE 380
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V YNTLI CK G+ QE L+ M G PDT T ++ G+ K G
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAG------- 433
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
E+++ L + + ++G P++ N L+ +C
Sbjct: 434 ---EIEK-------------------------GKELFDEMNKEGVAPNVVTVNTLVGGMC 465
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ V+ A+ E R +K TY ALI FC + +A+ L +EML+SG PD+
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ LI+G+ + A +L K DT YN + F ++ E+ K
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585
Query: 582 LRLGFAPNNLTCKYMIHSLWKGMERKF 608
G P+ +T +I K + KF
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKF 612
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 17/309 (5%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ VS+ F +K + Y +++ N F AM++ E+ L C
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM--LKSGCSP 522
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V+ LIS + + G + ++ + +G +P V N L+ G + N
Sbjct: 523 DAIVYYTLIS-------GFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ +++ +EM G+ P+T T+N L KNGD+ + K+ + G P + TY +
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
I++YC G N+A +++ M + V P+ V Y L+N LCK KV+ A L M G
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG 695
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
++P+ +YN + E +++ + M+ + PD T +I+ + LSA+
Sbjct: 696 VTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTE-------WLSAV 748
Query: 401 NLVVELQRF 409
+ L++F
Sbjct: 749 GEIERLKKF 757
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMV----DRNIKPSLSTYRALICCFCGIG 499
D V + + N + L + V DAL + DEM D N +P+ +T L
Sbjct: 184 DPSVKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRE 243
Query: 500 RS------GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
R+ E V+L+ + E G+L S LI C + N+ L K +
Sbjct: 244 RNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVL 303
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + N++ A +G+ +++ EL ++ + + PN +T +I+ + K
Sbjct: 304 ESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCK 352
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 200/407 (49%), Gaps = 3/407 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L ++ R G + +V+ L+ GL +D+ ++ EM GI PN ++
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L +CK+G + V ++ E+G +PD+V Y LI S CK G+ A + +M RR
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ P++VTY L+N +CKEG V+EA + +M +G++PD+V+YNTLI +M E+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309
Query: 365 KSLLYEMM--GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
LL EM+ N + P+ T ++QG GR+ A + ++ G ++ Y+ LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
L + ++ A L++ + G P Y+ L++ CK V A L M DR I+
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P L Y L+ C G A +L +EM ++ D +I+G C D+ A+ L
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
L + D +Y+ V NMFA+ GD+ + K+ GF P+
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD 535
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 190/367 (51%), Gaps = 3/367 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + K F + + G +P +V L++ L K+ + V + M R G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N+L + CK G V + G L+K+ E+G PD+VTYNTLI +++A +L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 299 RIMYR-RNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M R +N++ P++VT+ +++ GLC G++R+A Q+ M G ++V+YN LI
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ K++++ L+ EM G+ PD+FT I+++G+ K ++ A +L+ ++ G+
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+VA+C+ A +L + + + + Y+ ++ CK + A L +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
VD + P TY +I F G A ++ +M SG LPD + LI GY + ++
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 537 NKAEALL 543
NK L+
Sbjct: 553 NKVLELI 559
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 183/384 (47%), Gaps = 15/384 (3%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ ++D +C K +H + + L P++ + VL+ C S
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN---VLINCMCKEGSVKEA 274
Query: 113 FNWVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
+K E + P Y ++ L+ + AM +L E+V +V F +I
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVI 334
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
D +G +R++F+ + G ++V+ N L+ GLL+++ + + ++ +E
Sbjct: 335 QGLCD-------IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M +G+ P++ T++IL FCK VD+ L + + G +P+L Y L+ + C++G
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGM 447
Query: 291 LNDAFYLYRIMYRRNVLP-DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ A L+ M N P D+V Y+T+++G CK G ++ A +L +V GL+PD V+Y+
Sbjct: 448 MERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I + K G M+ + +L +M +G PD ++QGY +G + L L+ E+
Sbjct: 506 IVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Query: 410 GVSISRDIYDYLIVALCQDNRPFA 433
+++ I L +L N A
Sbjct: 566 NIALDSKIISTLSTSLVASNEGKA 589
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 157/334 (47%), Gaps = 5/334 (1%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMY---RRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D V+YNT++++ C++G + A L R M P+ V+YT LM LC + +A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L M G+ D+V+Y TLI C ++ ++ L+ EM +GI P+ ++QGY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K GR + VE+ G+ +Y LI +LC+ + A +++ + + G P++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ +CK SV +A+ + +M ++ + P + TY LI + EA+ L++E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 511 MLESGML--PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
M+ + P+ +I G C + +A + + + + +YN +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K MEL LG P++ T +I K
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 222/461 (48%), Gaps = 34/461 (7%)
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK----------------------FSFAMK 147
+ FF W + + + +Y ++ +LA + + + + ++
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60
Query: 148 MLCELVELVKDCPHSVDVFQDLIS--CTEDC-NWAYVKVGLIR-----ESFKTFRKTLDV 199
LC+ + + VF+ + + C+ + +++ + GL R E+ + + +D
Sbjct: 61 SLCQ----AQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG 116
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP++V+ LL+GL K+ + + ++ M G P+ +N+L F K GD+ +
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
E++ E+G P + TYN+L+S + +KG L++ M R+ +P++ T+ L++G
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK G + EAH+LF M G PD+VSYNTL+ C +GK E++ LL EM+ +G+ PD
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ I++ GY K G L A+ L E+ + G+ Y +I LC+ + AA + +
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +G P + L+ LC+ + + ++ L MV P + Y L+ C
Sbjct: 357 DMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK 416
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
RS + + E+ E G PD +I +V++ D AE
Sbjct: 417 RSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 204/427 (47%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + T+ L G P+ + +LL L + ++ V+ M G PN
Sbjct: 28 AKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNV 87
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+++IL C+ VD+ L ++ + G P++VTY +L+S CK G+L +A L+
Sbjct: 88 FSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSR 147
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R PD V Y L++G K+G + EA++LF M+ +G P + +YN+L+ + ++G+
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGE 207
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+SL +M+ G P+ FT ++ G+ K G ++ A L +E++ G Y+
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ +C +P A LL + + G P + YN L++ K ++ A+ L E+
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P +Y +I C C G+ G A + +M+ +G PD+ + L+ G C + + ++
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + YN + + + E+ GF+P+ K ++ +L
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Query: 601 WKGMERK 607
+ +++
Sbjct: 448 RRSDDKE 454
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 171/365 (46%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T ++N L V K+G D V G + G P+ TY L+ S C+ R +A ++
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + P++ +Y+ L+ GLC+ KV EA +L + M+ G P++V+Y +L+ CK
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK++E+ L M+ G PD +++ G+ K+G + A L E+ G + Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ + SL + + + G VP++ +N L++ CK + +A L EM
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P + +Y L+ C G+ EA L+ EM+ SG+ PD +LI+GY ++
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDH 315
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K D SY+ + + G + + K + G AP+ ++
Sbjct: 316 AIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVI 375
Query: 599 SLWKG 603
L +G
Sbjct: 376 GLCRG 380
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 203/422 (48%), Gaps = 3/422 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + + FK + G P I+ C L+ G ++ + V E + + G P+
Sbjct: 68 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L +CK+G++D L+ ++ PD+VTYNT++ + C G+L A +
Sbjct: 128 ITYNVLISGYCKSGEIDNA---LQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
++ PD++TYT L+ CKE V +A +L M ++G PD+V+YN LI CKEG+
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L M G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ G P+ YN L+ CK + A+ D MV R
Sbjct: 305 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY L+ C G+ AV +++++ G P +I+G +A
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL +K D +Y+++ + + +G + + ++ LG PN +T ++ L
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 484
Query: 601 WK 602
K
Sbjct: 485 CK 486
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 192/391 (49%), Gaps = 3/391 (0%)
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
L L++ ++ ++ E M G P+ L FC+ G K +E +E+ G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD++TYN LIS YCK G +++A +++ R NV PD+VTY T++ LC GK+++A +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNAL---QVLDRMNVAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ R + + PD+++Y LI A CKE + ++ LL EM G PD T +++ G
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
KEGRL A+ + + +G + ++ ++ ++C R A LL + + G PS+
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ LC+ + A+ + ++M P+ +Y L+ FC + A+ +D M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ G PD L+ C + V+ A +L + K +YN V + ++ G
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ ++L R G P+ +T ++ L +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 192/412 (46%), Gaps = 9/412 (2%)
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
V + + + P Y I+ L + K AM++L +L K+C V + LI T
Sbjct: 149 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR--QLQKECYPDVITYTILIEAT-- 204
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C + V ++ K + + G +P +V+ N L+NG+ K +D+ + M G
Sbjct: 205 CKESGVG-----QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PN T NI+ C G L + +G P +VT+N LI+ C++G L A
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M P+ ++Y L++G CKE K+ A + MV RG PDIV+YNTL+ A
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK+GK+ + +L ++ G P T ++ G K G+ A+ L+ E++R G+
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y L+ L ++ + A + G P+ YN +M LCK A+
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
M+ + KP+ +TY LI G + EA+ L++E+ G++ S +V +
Sbjct: 500 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 206/445 (46%), Gaps = 39/445 (8%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D+I CT + ++G +++ G P +++ N L++G K ID QV
Sbjct: 91 DIIPCTSLIR-GFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ R+ + P+ T+N + C +G + + L++ ++ PD++TY LI + CK
Sbjct: 150 LD---RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCK 206
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ + A L M + PD+VTY L+NG+CKEG++ EA + + M G P++++
Sbjct: 207 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 266
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N ++ + C G+ +++ LL +M+ G P T I++ ++G L A++++ ++
Sbjct: 267 HNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMP 326
Query: 408 RFG-----------------------------VSISR----DI--YDYLIVALCQDNRPF 432
G + +SR DI Y+ L+ ALC+D +
Sbjct: 327 MHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVD 386
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A +L ++ G P L YN +++ L K A+ L DEM + +KP + TY +L+
Sbjct: 387 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G+ EA+ ++ G+ P++ ++ G C + ++A L + K
Sbjct: 447 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 506
Query: 553 YDTESYNAVFNMFAEDGDLSKLMEL 577
+Y + A +G + ++L
Sbjct: 507 PTEATYTILIEGIAYEGLAKEALDL 531
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P IV+ N LL L K +D ++ ++ G P T+N + K G ++
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ +G PD++TY++L+S ++G++++A + + + P+ +TY ++M G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK + A M+ + P +Y LI EG +E+ LL E+ G+
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 543
Query: 380 TFTCQIIVQ 388
+ Q+ V+
Sbjct: 544 SSAEQVAVK 552
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 219/481 (45%), Gaps = 44/481 (9%)
Query: 162 SVDVFQD-----LISCTEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
SV VF++ L+ +CN A K G I+E+ F + G +P ++S LL+
Sbjct: 313 SVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLH 372
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
G CI ++ M G+ P+ H FN L + + + G +DK E + ++G +P
Sbjct: 373 GYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNP 432
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY-------------------- 313
D++T++T+IS++C+ GRL+DA + M V PD Y
Sbjct: 433 DIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELI 492
Query: 314 ----------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
T+++N LCKEG+V E + ++H G P+++++N+L+ YC
Sbjct: 493 SDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCL 552
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G M+E+ LL M G+ PD +T +V GY K GR+ AL L ++ V+++
Sbjct: 553 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 612
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ ++ L Q R A + + + G S+ Y ++ LC+ + +A +L +++
Sbjct: 613 YNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF 672
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
N+K + T+ +I +GR EA L + G++P RV+I E+
Sbjct: 673 SMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFE 732
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A+ L K D+ N + M G+++K + + G P T +I
Sbjct: 733 DADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLI 792
Query: 598 H 598
+
Sbjct: 793 Y 793
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 185/386 (47%), Gaps = 1/386 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + ++ F K + G P++V+ + L+NGL K +D+ +V +M G+ P
Sbjct: 233 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 292
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L H + +G + +++ PD+ N+ +++ CK GR+ +A ++
Sbjct: 293 NNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF 352
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD+++Y L++G G + LF+ MV G+ PD +NTLI AY +
Sbjct: 353 DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARL 412
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M +S + +M G+ PD T ++ + + GRL A+ + GV +Y
Sbjct: 413 GMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 472
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPS-LEIYNELMESLCKCDSVADALLLKDEMV 477
LI C A L+ + G P ++ + ++ +LCK VA+ + D ++
Sbjct: 473 SCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLII 532
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+P+L T+ +L+ +C +G EAV L+D M G+ PD L++GYC ++
Sbjct: 533 HTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRID 592
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFN 563
A L K + SYN + +
Sbjct: 593 DALTLFRDMLHKRVTLTSVSYNIILH 618
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 188/391 (48%), Gaps = 36/391 (9%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L+N + D V+ + R G+ P+ ++N L F K G+VDK +
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+EE+G P++VTY++LI+ CK ++ A + R M V P+ +TY L++G
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G +E+ ++F M L PD+ + N+ + A CK G+++E++ + M+ G PD +
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ GY G + NL V +C+
Sbjct: 367 YGALLHGYATAGCIAGMDNL------------------FNVMVCE--------------- 393
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G VP ++N L+ + + + +LL+ ++M + + P + T+ +I FC +GR
Sbjct: 394 --GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLD 451
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTESYNAV 561
+A+ + M+++G+ PD+ + LI G C +D+ KA+ L+ +K + + ++
Sbjct: 452 DAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSI 511
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N ++G +++ ++ + G PN +T
Sbjct: 512 INNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 542
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 198/434 (45%), Gaps = 7/434 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G+ +ES + F++ P + +CN + L K I + +++ M G P
Sbjct: 303 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 362
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++ L H + G + ++ + EG PD +NTLI++Y + G ++ + ++
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V PD++T++T+++ C+ G++ +A + F+ M+ G+ PD Y+ LI C
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Query: 359 GKMQESKSLLYEMMGNGIYPDT---FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ ++K L+ +M+ GI P FT I+ KEGR+ ++V + G +
Sbjct: 483 RDLVKAKELISDMLSKGIPPPCIKFFTS--IINNLCKEGRVAEGKDVVDLIIHTGQRPNL 540
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
++ L+ C A LL+ + G P + YN L++ CK + DAL L +
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 600
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ + + + +Y ++ R+ A + EM+ESGM ++ G C
Sbjct: 601 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC 660
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
++A LL +D ++N V + G + EL G P LT +
Sbjct: 661 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 720
Query: 596 MIHSLWKGMERKFQ 609
MI +L K E F+
Sbjct: 721 MITNLIK--EESFE 732
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I ++N L K + + V + + G PN TFN L +C G++ + G
Sbjct: 503 PCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 562
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ +E G +PD+ TYNTL+ YCK GR++DA L+R M + V V+Y +++GL +
Sbjct: 563 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 622
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G++ I +Y T++ C+ E+ LL ++ + D T
Sbjct: 623 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 682
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 683 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P I NE++ L VA A ++ + I P +T LI F G+
Sbjct: 743 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 802
Query: 503 EAVSLMDE 510
E + L+ E
Sbjct: 803 EYIKLLPE 810
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L + VS N +L+GL + +++ EM G+
Sbjct: 584 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAV 643
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ + C+N D+ N LEK+ D++T+N +I + K GR +A L+
Sbjct: 644 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 703
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P ++TY ++ L KE +A LF M +PD N +I +
Sbjct: 704 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 763
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
G++ ++ + L ++ GI P+ T +++ + G+ + L+ E RF
Sbjct: 764 GEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRF 814
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
ALT F + + + TS +Y +I+H L + A +M E++E S+ +
Sbjct: 594 ALTLFRDMLHK-RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE--SGMAVSIHTYAT 650
Query: 169 LI------SCTEDCNW----------------------AYVKVGLIRESFKTFRKTLDVG 200
++ +CT++ N A KVG +E+ + F G
Sbjct: 651 VLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYG 710
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P+I++ ++ L+K + ++ M + P++ N + + G+V K
Sbjct: 711 LVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAG 770
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+L KI+++G P+ T + LI + G+ + L YR
Sbjct: 771 NYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYR 813
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 192/412 (46%), Gaps = 1/412 (0%)
Query: 188 ESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+F R+ D G PS+ + N +L+GL K + +E G + HT+ +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
KN + +EKI G P + TYN L++ CK GRL +A L R +
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD+VTYT+L++GL KE + EA++LF M RGL D V Y LI + GK+ ++ S
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ M G PD T ++ G K GR+ +A+ + ++ G++ + +Y LI LC
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A +L ++ + P YN L++ LCK V A DEM++ KP +
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 411
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY L+ FC G + A + D+M S P+ LI+G C + + KA
Sbjct: 412 TYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHM 471
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
++ D+ Y+++ + + G L L R G A + + + H
Sbjct: 472 KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH 523
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 228/489 (46%), Gaps = 23/489 (4%)
Query: 37 QDSEHKSLSNPLYN-----FLPETQNPNKIVDLICSSLKKGDSHLTL--LQNDLKPLLPH 89
+ H+ N L N FLP+ + N ++ C + + ++ + ++ D + P
Sbjct: 71 RTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYG-VAPS 129
Query: 90 LGAHEISRVLLRCQSDSVSALT--FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK 147
L H + L C+S V A F N I + Y IV LA N K A+
Sbjct: 130 LKTHNLVLHGL-CKSGKVLAAMDHFETTTTNGCTIDIHT--YTAIVDWLAKNKKIQDAVA 186
Query: 148 MLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
++ ++ C ++ + L++ K+G + E+ RK +D G P +V+
Sbjct: 187 LMEKIT--ANGCTPTIATYNALLN-------GLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
L++GL K + +++++EM G+ +T + L + G + + + + +
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+G PD+VT +T+I CK GR+ A +++ M R + P+ V Y+ L++GLCK K+
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A ++ +M +PD ++YN LI CK G ++ +++ EM+ G PD +T I+V
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ K G +A + ++ S + Y LI LC+ + A+ + + + G
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCP 477
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +Y+ L++ LCK + +L DEM + S + R LI C R EAVSL
Sbjct: 478 PDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTR-LIFHLCKANRVDEAVSL 536
Query: 508 MDEMLESGM 516
+ + + GM
Sbjct: 537 FNAIRKEGM 545
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 166/350 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F T G I + +++ L K I + E++ G P
Sbjct: 142 KSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIA 201
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK G +++ L KI + G PD+VTY +LI K+ R +A+ L++ M
Sbjct: 202 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 261
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++ D V YT L+ GL + GK+ +A ++ M +G PD+V+ +T+I CK G++
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + M G+ P+ ++ G K ++ AL ++ ++++ + Y+ L
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ AA + + + + G P + YN L+ CK + A + D+M +
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P++ TY LI C + +A M E G PDS + L++G C
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 168/385 (43%), Gaps = 3/385 (0%)
Query: 222 DQCWQVYEEMG--RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
D W++++ + R G + HT N L VF + + L+ F PD+ T+N
Sbjct: 39 DLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWN 98
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRR-NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
LI+ YC +AF + R M V P L T+ +++GLCK GKV A F
Sbjct: 99 VLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT 158
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G + DI +Y ++ K K+Q++ +L+ ++ NG P T ++ G K GRL
Sbjct: 159 NGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 218
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A++L+ ++ G + Y LI L ++ R F A L + + G V Y L+
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIR 278
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
L + + A + M + P + T +I C GR G AV + M G+ P
Sbjct: 279 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ + LI+G C + ++ A +L K F DT +YN + + + GD+
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKG 603
L G P+ T ++ K
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKA 423
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 204/430 (47%), Gaps = 13/430 (3%)
Query: 112 FFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
FF W+ + + + T +YC ++H L + S A K L ++V K + VF +
Sbjct: 1 FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSAXAVFAAI 59
Query: 170 ----------ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
I Y++ G +R++ + +R T + + +C +L L+KL
Sbjct: 60 XETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLK 119
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
W + G FNIL H FCK+GD+ + I + G P +V+YN
Sbjct: 120 YFKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYN 179
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TL++ Y + G LN+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +
Sbjct: 180 TLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVK 239
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GL P+ V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L A
Sbjct: 240 GLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQA 299
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+L+ E+ G+ + Y LI C++ AA +R+ Q+ Y L+
Sbjct: 300 HDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISG 359
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC+ DA + EM+ +KP TY +I FC G + L+ +M +G P
Sbjct: 360 LCQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPS 419
Query: 520 SQICRVLING 529
VL+NG
Sbjct: 420 VVTYNVLMNG 429
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 152/354 (42%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ + VL L+
Sbjct: 69 DIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKYFKLVWGFX 128
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 129 XXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRL 188
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 189 GDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTF 248
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ +P L YN L+ LCK + A L DEM
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 308
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +K TY LI C G A M++ + D LI+G C E
Sbjct: 309 KGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 368
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L DT +Y + N F + GD+ K +L K R G AP+ +T
Sbjct: 369 AEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVT 422
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 17 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIXETKGTQRXDIYVFSGL 76
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I Y + G ++++ + + TC+ +++ K + G
Sbjct: 77 ITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKYFKLVWGFXXXIXXXGX 136
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 137 XXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFR 196
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G+ P+ LI+G+C
Sbjct: 197 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHC 256
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + + D +YN + + GDL + +L G + +
Sbjct: 257 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKI 316
Query: 592 TCKYMI 597
T +I
Sbjct: 317 TYTTLI 322
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 205/401 (51%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N +++G K +++ +++EM + GI P+ T+N + H CK +DK F
Sbjct: 230 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 289
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ + P+ TYN LI Y G+ +A +++ M R ++LPD+VT + LM LCK
Sbjct: 290 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SYN ++ Y +G + + L M+G+GI PD +T
Sbjct: 350 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 409
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P YN L++ C S+ A L E+++ + + + ++I C +GR
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ PD+ + +L++GYC+ + KA + + Y +
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 630
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 201/433 (46%), Gaps = 16/433 (3%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y G +E+ + F++ P +V+ + L+ L K I + V++ M G
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 369
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ ++NI+ + + G + + + + +G PD T+N LI +Y G L+ A +
Sbjct: 370 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 429
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M V PD+VTY T++ LC+ GK+ +A + F++M+ +G++PD +YN LI +C
Sbjct: 430 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 489
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++K L+ E+M NG++ D I+ K GR++ A N+ G+ +
Sbjct: 490 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVV 549
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ C + A + + + G P++ +Y L+ CK + + L L EM+
Sbjct: 550 YSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREML 609
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD----SQICRVLINGYCME 533
R IKPS Y +I GR+ A EM ESG+ D + + R L C +
Sbjct: 610 QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFD 669
Query: 534 KDVNKAEALLGFFAKKFQIYDTE----SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ + F K+ + + + + N + + + + + +L R PN
Sbjct: 670 EAI--------FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721
Query: 590 NLTCKYMIHSLWK 602
+T MI +L K
Sbjct: 722 VVTYSIMITNLIK 734
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 221/514 (42%), Gaps = 42/514 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y +++ L K A +L + E C +V + +I + K
Sbjct: 193 PDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID-------GFFKE 245
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ F++ + G P +V+ N +++ L K +D+ +M + PN T+
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 305
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + + G + +++ PD+VT + L+ S CK G++ +A ++ M
Sbjct: 306 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM 365
Query: 304 RNVLPDLVTYTTLMNGLCKE-----------------------------------GKVRE 328
+ PD+ +Y ++NG + G + +
Sbjct: 366 KGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDK 425
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +F+ M G+ PD+V+Y T+I A C+ GKM ++ +M+ G+ PD + ++Q
Sbjct: 426 AMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ 485
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ G LL A L+ E+ G+ + + +I LC+ R A ++ + G P
Sbjct: 486 GFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 545
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+Y+ LM+ C + AL + D MV I+P++ Y L+ +C IGR E +SL
Sbjct: 546 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLF 605
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EML+ G+ P + + ++I+G A+ + D +YN V ++
Sbjct: 606 REMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKN 665
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + L K + N +T MI +++
Sbjct: 666 RCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 699
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 193/404 (47%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ N N L FC+ D+ ++ L + E G PD+ +Y+ L+ S C
Sbjct: 147 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 206
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + P++V Y T+++G KEG V +A LF MV RG+ PD
Sbjct: 207 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 266
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YN+++ A CK M ++++ L +M+ + P+ +T ++ GY G+ A+ +
Sbjct: 267 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 326
Query: 405 ELQRFG--------------------VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R + +RD++D + + Q+ F+
Sbjct: 327 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATK 385
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P +N L+++ C + A+++ +EM D +KP + TY
Sbjct: 386 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 445
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
R +I C IG+ +A+ ++M++ G+ PD LI G+C + KA+ L+
Sbjct: 446 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 505
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D ++++ N + L ++M+ Q F + +G P+
Sbjct: 506 NGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 546
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 177/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S N +LNG C+ +++ M GI P+ +
Sbjct: 349 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 408
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G PD+VTY T+I++ C+ G+++DA + M
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V PD +V +++++N LCK G+V
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL PD V Y+ L+ YC GKM+++ + M+ GI P+ +
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y +I L Q R A + + G
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ L K +A+ L E+ N+K ++ T +I R EA
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 708
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + S ++P+ ++I E V +AE
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAE 742
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G++ ++ F + D G +P +V+ ++ L ++ +D + + +M G+ P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + +N L FC +G + K + +I G D+V ++++I++ CK GR+ DA ++
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD V Y+ LM+G C GK+ +A ++F MV G+ P++V Y TL+ YCK
Sbjct: 536 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI 595
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E SL EM+ GI P T II+ G + GR + A E+ G+++ Y
Sbjct: 596 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTY 655
Query: 419 DYLIVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ ++ L + NR F A L + + ++ N +++ + + V +A L +
Sbjct: 656 NIVLRGLFK-NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 714
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P++ TY +I G EA + M +G P+S++ ++ + ++
Sbjct: 715 RSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 774
Query: 538 KAEALL 543
+A A L
Sbjct: 775 RAGAYL 780
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 175/402 (43%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FN ++ D +KP Y ++ L K AM+ ++++ + +
Sbjct: 426 AMIIFNEMR-DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID--QGVAPDKYAYNC 482
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI CT G + ++ + + ++ G IV + ++N L KL +
Sbjct: 483 LIQGFCTH---------GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P+ +++L +C G ++K + + G +P++V Y TL++ YC
Sbjct: 534 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 593
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M +R + P + Y+ +++GL + G+ A FH M G++ DI
Sbjct: 594 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDIC 653
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN ++ K E+ L E+ + + T ++ G + R+ A +L +
Sbjct: 654 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 713
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R + + Y +I L ++ A + + G P+ + N ++ L K + +
Sbjct: 714 SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 773
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 774 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 38/332 (11%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + +++ L+ G C+ + EA
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SY+ L+ + C +GK ++ LL M G P+ ++
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIP----------------------------------- 264
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN ++ +LCK ++ A +MV++ + P+ TY LI + G+ EAV +
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EM +LPD +L+ C + +A + A K Q D SYN + N +A
Sbjct: 325 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 384
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G L + +L L G AP+ T +I +
Sbjct: 385 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 416
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 205/401 (51%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N +++G K +++ +++EM + GI P+ T+N + H CK +DK F
Sbjct: 217 PNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAF 276
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ + P+ TYN LI Y G+ +A +++ M R ++LPD+VT + LM LCK
Sbjct: 277 LRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SYN ++ Y +G + + L M+G+GI PD +T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYT 396
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P YN L++ C S+ A L E+++ + + + ++I C +GR
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ PD+ + +L++GYC+ + KA + + Y +
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 617
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 193/425 (45%), Gaps = 35/425 (8%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y G +E+ + F++ P +V+ + L+ L K I + V++ M G
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQN 356
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ ++NI+ + + G + + + + +G PD T+N LI +Y G L+ A +
Sbjct: 357 PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMII 416
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M V PD+VTY T++ LC+ GK+ +A + F++M+ +G++PD +YN LI +C
Sbjct: 417 FNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCT 476
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++K L+ E+M NG++ D I+ K GR++ A N I
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN---------------I 521
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+D + G P +Y+ LM+ C + AL + D MV
Sbjct: 522 FDLTV--------------------NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 561
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
I+P++ Y L+ +C IGR E +SL EML+ G+ P + + ++I+G
Sbjct: 562 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 621
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A+ + D +YN V ++ + + L K + N +T MI
Sbjct: 622 PAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681
Query: 598 HSLWK 602
+++
Sbjct: 682 DGMFQ 686
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 193/404 (47%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ N N L FC+ D+ ++ L + E G PD+ +Y+ L+ S C
Sbjct: 134 FGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + P++V Y T+++G KEG V +A LF MV RG+ PD
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+YN+++ A CK M ++++ L +M+ + P+ +T ++ GY G+ A+ +
Sbjct: 254 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Query: 405 ELQRFG--------------------VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R + +RD++D + + Q+ F+
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATK 372
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P +N L+++ C + A+++ +EM D +KP + TY
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
R +I C IG+ +A+ ++M++ G+ PD LI G+C + KA+ L+
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 492
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D ++++ N + L ++M+ Q F + +G P+
Sbjct: 493 NGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 533
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 176/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S N +LNG C+ +++ M GI P+ +
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 395
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G PD+VTY T+I++ C+ G+++DA + M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V PD +V +++++N LCK G+V
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL PD V Y+ L+ YC GKM+++ + M+ GI P+ +
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y +I L Q R A + + G
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ L K +A+ L E+ N+K ++ T +I R EA
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + S ++P ++I E V +AE
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAE 729
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 182/366 (49%), Gaps = 2/366 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G++ ++ F + D G +P +V+ ++ L ++ +D + + +M G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + +N L FC +G + K + +I G D+V ++++I++ CK GR+ DA ++
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD V Y+ LM+G C GK+ +A ++F MV G+ P++V Y TL+ YCK
Sbjct: 523 DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKI 582
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E SL EM+ GI P T II+ G + GR + A E+ G+++ Y
Sbjct: 583 GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTY 642
Query: 419 DYLIVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ ++ L + NR F A L + + ++ N +++ + + V +A L +
Sbjct: 643 NIVLRGLFK-NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 701
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ PS+ TY +I G EA + M +G P+S++ ++ + ++
Sbjct: 702 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 761
Query: 538 KAEALL 543
+A A L
Sbjct: 762 RAGAYL 767
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 175/402 (43%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FN ++ D +KP Y ++ L K AM+ ++++ + +
Sbjct: 413 AMIIFNEMR-DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID--QGVAPDKYAYNC 469
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI CT G + ++ + + ++ G IV + ++N L KL +
Sbjct: 470 LIQGFCTH---------GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P+ +++L +C G ++K + + G +P++V Y TL++ YC
Sbjct: 521 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 580
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M +R + P + Y+ +++GL + G+ A FH M G++ DI
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDIC 640
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN ++ K E+ L E+ + + T ++ G + R+ A +L +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASI 700
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R + S Y +I L ++ A + + G P+ + N ++ L K + +
Sbjct: 701 SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEI 760
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 38/332 (11%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + +++ L+ G C+ + EA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SY+ L+ + C +GK ++ LL M G P+ ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIP----------------------------------- 251
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN ++ +LCK ++ A +MV++ + P+ TY LI + G+ EAV +
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EM +LPD +L+ C + +A + A K Q D SYN + N +A
Sbjct: 312 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G L + +L L G AP+ T +I +
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKA 403
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 199/397 (50%), Gaps = 9/397 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+PT + +IV+ L K S A+ + ++VEL DC V + +I + K
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL--DCEPEVVSYSIIID-------SLCK 256
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
L+ E+ F +G P++V+ N L+ G+ Q +++EM + P+ T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F+IL CK G V + K+ + +PD+VTY++LI CK ++ L M
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEML 376
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
RN+ PD+VT++ ++ CK+G V EA + + M+ RGL P++V+YN+L+ YC +M
Sbjct: 377 SRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMD 436
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ + M+ G PD + I+++GY K R+ A L E+ G++ + + LI
Sbjct: 437 EARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLI 496
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LCQ RP+AA L +++G G P L Y+ L+ CK + +AL L + + +K
Sbjct: 497 SGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLK 556
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
P+ + L+ C G+ +A L + + PD
Sbjct: 557 PNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 181/365 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ + + G+QP++ + ++NGL K+ ++M + P ++
Sbjct: 188 GRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSY 247
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+I+ CKN V++ + G P +VTYN+LI C G+ A L++ M
Sbjct: 248 SIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE 307
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
N+ PD+VT++ L++ LCKEG V EA +F +M+ + PDIV+Y++LI CK +E
Sbjct: 308 WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKE 367
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
S +LL EM+ I PD T I V + K+G + A +++ + G+ + Y+ L+
Sbjct: 368 SSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMD 427
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C ++ A + + + G P + YN L++ CK + + +A L DEM + + P
Sbjct: 428 GYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTP 487
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ LI C GR A L +M G PD L++G+C +++A AL
Sbjct: 488 NSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547
Query: 544 GFFAK 548
K
Sbjct: 548 EALKK 552
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 209/442 (47%), Gaps = 7/442 (1%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
SV LI+C C+ V +G F K +GF+PSI++ N L+NGL I
Sbjct: 138 SVYTLTILINCL--CHLHLVGLG-----FSVLGKIFKLGFKPSIITFNTLINGLCIEGRI 190
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ + + + G P +T ++ + CK G +++K+ E +P++V+Y+ +
Sbjct: 191 VEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSII 250
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I S CK +N+A L+ M + P +VTY +L+ G+C G+ ++A LF M+ +
Sbjct: 251 IDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNM 310
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V+++ L+ A CKEG + E+ S+ +M+ + PD T ++ G K +
Sbjct: 311 KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESST 370
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ E+ + + + C+ A S++ + + G P++ YN LM+ C
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYC 430
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +A + D MV++ P + +Y LI +C R EA L DEM G+ P+S
Sbjct: 431 LHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI 490
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+G C A+ L D +Y+ + + F + G L + + L +
Sbjct: 491 THTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
+ PN++ CK ++ + K
Sbjct: 551 KKSQLKPNHVICKILLGGMCKA 572
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 201/400 (50%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
+RK G S+ + L+N L L+ + + V ++ ++G P+ TFN L + C
Sbjct: 127 YRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCI 186
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + L+ I G+ P + T+ +++ CK G+ + A + M + P++V+
Sbjct: 187 EGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS 246
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+ +++ LCK V EA LF+ M G+SP +V+YN+LI+ C G+ +++ L EM+
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ PD T I+V KEG +L AL++ ++ + + Y LI +C+ +
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+++LL + P + ++ ++ CK V++A + + M++R ++P++ TY +L+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+C + EA + D M+ G PD +LI GYC + +++A+ L + K
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
++ ++ + + + G EL K+ G P+ +T
Sbjct: 487 PNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLIT 526
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 142/272 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G++ E+ F K + + +P IV+ + L++G+ K + + + EM I P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF+I VFCK G V + + + E G P++VTYN+L+ YC ++++A ++
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
IM + PD+++Y L+ G CK ++ EA QLF M H+GL+P+ +++ TLI C+
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ +K L +M +G PD T ++ G+ K G L AL L L++ + + I
Sbjct: 503 GRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVIC 562
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
L+ +C+ + A L + + P +
Sbjct: 563 KILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 173/414 (41%), Gaps = 35/414 (8%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D + +M + P FN L + D V K+E G + T L
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF-------- 333
I+ C + F + +++ P ++T+ TL+NGLC EG++ EA +
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205
Query: 334 ------HRMVHRGL---------------------SPDIVSYNTLIFAYCKEGKMQESKS 366
H M+ GL P++VSY+ +I + CK + E+
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L Y M GI P T ++ G G+ A L E+ + + + L+ ALC
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
++ A S+ ++ Q P + Y+ L+ +CK ++ L +EM+ RNI+P +
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
T+ + FC G EA S+++ M+E G+ P+ L++GYC+ +++A +
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D SYN + + + + + +L G PN++T +I L
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGL 499
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 207/431 (48%), Gaps = 16/431 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +GF P++V+ N LL+GL + + + ++ +M + PN TF L +
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMN 89
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G V + L+++ E+G P+ +TY T++ CK G A L R M ++
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+V Y+ +++GL K+G+ +A LF M +G+ PDIV+Y+ +I +C GK E++ L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ KEG L SA +L+ E+ GV + + L+ LC
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 428 DNRPFAATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ A + + + + +G P ++ YN L+ L +A L +EM
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
R I P TY ++I C R EA + D M P+ LI GYC V
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ L ++ + + +Y + F + G+++ +++ + + G P+ +T + M
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449
Query: 597 IHSLWKGMERK 607
+ LW E K
Sbjct: 450 LTGLWSKEELK 460
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 32/325 (9%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ IKP Y I+ L + + + A + E+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM--------QDK 181
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+F D+++ + N + G E+ + ++ L P +V+ + L+N L+K ++
Sbjct: 182 GIFPDIVTYSCMIN-GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNG-----------------DVDKVNGFLEKI 266
+ +EM G+CPN T N L C +G D+D + F
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF---- 296
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G +PD+ TYN LIS +G+ +A LY M R ++PD VTY++++NGLCK+ ++
Sbjct: 297 --NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRL 354
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA Q+F M + SP+IV++NTLI YCK G + + L EM GI + T +
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 387 VQGYGKEGRLLSALNLVVELQRFGV 411
++G+ K G + +L++ E+ GV
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGV 439
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 169/381 (44%), Gaps = 20/381 (5%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V A+ + + D ++P Y IV + A+ +L ++ EL P V
Sbjct: 98 VEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVV--- 153
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+ S D W K G ++ F + D G P IV+ + ++NG + +
Sbjct: 154 --IYSAIIDGLW---KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQR 208
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ +EM I P+ TF+ L + K GD++ L+++ G P++VT NTL+ C
Sbjct: 209 LLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268
Query: 287 KKGRLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
G+L DA +++ M + V PD+ TY L++GL EGK EA +L+
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 328
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M HRG+ PD V+Y+++I CK+ ++ E+ + M P+ T ++ GY K G
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ L L E+ R G+ + Y LI + + + + + G P
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448
Query: 456 LMESLCKCDSVADALLLKDEM 476
++ L + + AL + +E+
Sbjct: 449 MLTGLWSKEELKRALAMLEEL 469
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 193/392 (49%), Gaps = 4/392 (1%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C+ ++ E++ + + LD G P N L+ ++L + +V++EM R
Sbjct: 157 CSGLMSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-S 215
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P TFN L C+ D+D V+G +++ + G PD+ TY LI +C+ GR+ +A
Sbjct: 216 VQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAV 275
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
++ M V P+ V +TTL++ CKEG V L+ M RG+ PD+V+YN L+
Sbjct: 276 KMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGL 335
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C+ ++ ++S++ EM G+ PD T ++ G K+G+L A+++ ++ VS+
Sbjct: 336 CRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDE 395
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI L + RP A +L + + P Y ++++ C+ V L E
Sbjct: 396 VTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKE 455
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M ++ KP + TY ++ C +G+ A L+ ML G+ PD +L++G C
Sbjct: 456 MQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGK 515
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
V +E L + K + D Y ++ + A+
Sbjct: 516 VANSEEL---ESSKGMVPDFAVYTSLISELAK 544
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 163/331 (49%), Gaps = 1/331 (0%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
F ++ + G P+ +N L+ + + G L A ++ M RR+V P +VT+ TL++G+C
Sbjct: 173 FYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLISGMC 231
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+ + L+ M G+ PD+ +Y LI +C+ G+M+ + + EM G+ P+
Sbjct: 232 RARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAV 291
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ + KEG + + ++L +++ GV Y+ L+ LC+ AA S++E +
Sbjct: 292 VFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM 351
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G P Y L++ CK + A+ +K +M ++ + TY ALI GR
Sbjct: 352 KNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRP 411
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A ++ EM+E+ + PD+ ++I+ +C + DV LL K + +YN +
Sbjct: 412 VDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVI 471
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N + G + L L +G +P+++T
Sbjct: 472 MNGLCKLGQMKNADMLLHAMLNIGVSPDDIT 502
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 9/301 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ + A+ +D+ +KP Y ++ + A+KM E+ + + P+
Sbjct: 231 CRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN-PN 289
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V VF LI A+ K G + ++ G P +V+ N L+NGL + +
Sbjct: 290 AV-VFTTLID-------AHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ EEM G+ P+ T+ L CK+G +D +K+ E+ D VTY L
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
IS K GR DA + R M + PD TYT +++ C++G V+ +L M ++G
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P +V+YN ++ CK G+M+ + LL+ M+ G+ PD T I++ G K G++ ++
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521
Query: 402 L 402
L
Sbjct: 522 L 522
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 131/289 (45%), Gaps = 19/289 (6%)
Query: 48 LYNFLPETQ-NPNKIV--DLICSSLKKGD--SHLTLLQN-DLKPLLPHLGAHEISRVLLR 101
++N + +T NPN +V LI + K+G+ + + L Q+ ++ ++P L A+ + V
Sbjct: 277 MFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYN-ALVNGL 335
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C++ ++ A + +KP Y ++ + K AM + ++ E K+
Sbjct: 336 CRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAE--KEVSL 393
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ LIS K G ++ + R+ ++ +P + +++ + +
Sbjct: 394 DEVTYTALIS-------GLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDV 446
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+++ +EM G P T+N++ + CK G + + L + G PD +TYN L
Sbjct: 447 KTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNIL 506
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ CK G++ ++ L + ++PD YT+L++ L K+ + H
Sbjct: 507 LDGQCKHGKVANSEELES---SKGMVPDFAVYTSLISELAKKKPAKNYH 552
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 207/431 (48%), Gaps = 16/431 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ TF K +GF P++V+ N LL+GL + + + ++ +M + PN TF L +
Sbjct: 34 ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMN 89
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVL 307
C+ G V + L+++ E+G P+ +TY T++ CK G A L R M ++
Sbjct: 90 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+V Y+ +++GL K+G+ +A LF M +G+ PDIV+Y+ +I +C GK E++ L
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM+ I PD T ++ KEG L SA +L+ E+ GV + + L+ LC
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269
Query: 428 DNRPFAATSLLERIGQ-----------DGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ A + + + + +G P ++ YN L+ L +A L +EM
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
R I P TY ++I C R EA + D M P+ LI GYC V
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ L ++ + + +Y + F + G+++ +++ + + G P+ +T + M
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449
Query: 597 IHSLWKGMERK 607
+ LW E K
Sbjct: 450 LTGLWSKEELK 460
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 166/355 (46%), Gaps = 32/355 (9%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+VSAL ++ IKP Y I+ L + + + A + E+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM--------QDK 181
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+F D+++ + N + G E+ + ++ L P +V+ + L+N L+K ++
Sbjct: 182 GIFPDIVTYSCMIN-GFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNS 240
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNG-----------------DVDKVNGFLEKI 266
+ +EM G+CPN T N L C +G D+D + F
Sbjct: 241 AQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAF---- 296
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G +PD+ TYN LIS +G+ +A LY M R ++PD VTY++++NGLCK+ ++
Sbjct: 297 --NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRL 354
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA Q+F M + SP+IV++NTLI YCK G + + L EM GI + T +
Sbjct: 355 DEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITL 414
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++G+ K G + +L++ E+ GV ++ L A ++LE +
Sbjct: 415 IRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 169/381 (44%), Gaps = 20/381 (5%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V A+ + + D ++P Y IV + A+ +L ++ EL P V
Sbjct: 98 VEAVALLDRMVED-GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVV--- 153
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+ S D W K G ++ F + D G P IV+ + ++NG + +
Sbjct: 154 --IYSAIIDGLW---KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQR 208
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ +EM I P+ TF+ L + K GD++ L+++ G P++VT NTL+ C
Sbjct: 209 LLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLC 268
Query: 287 KKGRLNDAFYLYRIMYR-----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
G+L DA +++ M + V PD+ TY L++GL EGK EA +L+
Sbjct: 269 DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 328
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M HRG+ PD V+Y+++I CK+ ++ E+ + M P+ T ++ GY K G
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ L L E+ R G+ + Y LI + + + + + G P
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448
Query: 456 LMESLCKCDSVADALLLKDEM 476
++ L + + AL + +E+
Sbjct: 449 MLTGLWSKEELKKALAMLEEL 469
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 195/406 (48%), Gaps = 42/406 (10%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H V LI+C C +V G F K + +G +P++++ + L+NG
Sbjct: 124 HDVLSLTILINCF--CRLCHVDYG-----FSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++++ M G PN H+++I+ C+ G +V LE ++ G +PD+V YNT
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL-------------------- 320
++ CK +N+A +++ M +LP +VTYT+L++GL
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296
Query: 321 ---------------CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
CKEG+V EA + M G+ PD+ +YNTL+ YC ++ E++
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ M+ G PD F+ I+V GY K R+ A L E+ G+ Y+ LI L
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
CQ RP A L + + +GY P+L Y+ L++ L K + A+ L M + +KP L
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
TY +I C G+ +A L E+ G+ P++ +C I+G C
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVC 522
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 198/417 (47%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F ++ PSIV L + L+++ + ++M GI + + I
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC+ VD L KI + G +P+++T++TLI+ +C +G++ A L+ +M R
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P++ +Y+ ++ GLC+ GK E +L M G PD+V YNT++ CK+ + E+
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ +M G GI P T ++ G GR A L+ E++ + + LI +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C++ A +L+ + + G P + YN LM C V +A + + M+ + P +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
++ L+ +C R EA L DEM G++PD+ LI+G C + +AE L
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +Y+ + + ++ G L + M L + G P+ +T MI + K
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK 488
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 172/340 (50%), Gaps = 9/340 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP +Y +I+ L K + +K+L E +++V C V ++ ++ K
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLL-EHMKVV-GCEPDVVIYNTIVD-------RLCK 243
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
L+ E+ F K G P++V+ L++GL L + + + EM I P+
Sbjct: 244 DRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVA 303
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L + CK G+V + L+ + E G +PD+ TYNTL++ YC + + +A ++ +M
Sbjct: 304 FSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI 363
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ +PD+ +++ L+NG CK ++ EA QLF M HRGL PD VSYNTLI C+ +
Sbjct: 364 SKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPL 423
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ L +M NG P+ T I++ K+G L A+ L ++ G+ Y+ +I
Sbjct: 424 EAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMI 483
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+C+ + A L + G P+ + ++ +CK
Sbjct: 484 DGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCK 523
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K I E+ + F + G P VS N L++GL + + +++++M G P
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++IL K G +D+ G +E G PDLVTYN +I CK G+ DA L+
Sbjct: 440 NLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELF 499
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ + + P+ T ++G+CK G + EAH+ F +M SP
Sbjct: 500 AELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%)
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ DAL + MV+ N PS+ + L + VSL +M +G+ D
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+LIN +C V+ ++LG K + +++ + N F +G + + +EL +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 585 GFAPNNLTCKYMIHSLWK 602
G+ PN + +I L +
Sbjct: 191 GYKPNVHSYSIIIKGLCR 208
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 243/513 (47%), Gaps = 43/513 (8%)
Query: 140 NKFSFAMKMLCELVELVKDCPH---SVDVFQDLI-SCTEDCNWAY-------VKVGLIRE 188
+ F + + + L+ + D H ++ VF D+I S T AY V + + +
Sbjct: 116 DGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDK 175
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F+ + + G PS+ + N +L GL K+ I ++++EM + + PNT T+N L
Sbjct: 176 GFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLID 235
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+CK G +++ GF E+++E+ + +LVTYN+L++ C GR++DA + M LP
Sbjct: 236 GYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLP 295
Query: 309 ----------------------------DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
D TY L+NGLC+ G++ +A ++ ++V G
Sbjct: 296 GGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENG 355
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
++P +SYN L+ AYC+EG ++++ +M G+ P+ T ++ + + G + A
Sbjct: 356 VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAE 415
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
V + GVS + + Y+ LI Q L+ + + G P++ Y L+ L
Sbjct: 416 TWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCL 475
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + DA ++ +M+ R + P+ Y LI C + + +A DEM++SG+
Sbjct: 476 CKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATL 535
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LING V KAE L A K D +YN++ + +A+ + K +EL +
Sbjct: 536 VTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK 595
Query: 581 FLRLGFAPNNLTCKYMIHSLWK----GMERKFQ 609
LG P T +I++ K M++ FQ
Sbjct: 596 MKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQ 628
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 185/393 (47%), Gaps = 36/393 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+VG I ++ + K ++ G PS +S N L+N + + + E+M G+ PN
Sbjct: 337 RVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRI 396
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN + FC+ G+VD ++ ++ E+G P + TYN+LI+ Y +KG F M
Sbjct: 397 TFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEM 456
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD----------------- 344
+ + P++++Y +L+N LCK+ K+ +A + M+ RG+SP+
Sbjct: 457 DKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKL 516
Query: 345 ------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+V+YNTLI + G++++++ L +M G G PD T +
Sbjct: 517 KDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSL 576
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K L L +++ G+ + + LI A C+ + + + Q
Sbjct: 577 ISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDL 635
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
VP +YNE++ S + +V A+ L +MVD+ + TY +LI + R E
Sbjct: 636 VPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKH 695
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L+D+M G++P +LI G C KD N A
Sbjct: 696 LVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGA 728
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 194/396 (48%), Gaps = 11/396 (2%)
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LLNGL ++ I++ +V ++ G+ P+ ++NIL + +C+ GDV K E++EE
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G +P+ +T+NT+IS +C+ G ++ A R M + V P + TY +L+NG ++G
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ M G+ P+++SY +LI CK+ K+ +++ +L +M+G G+ P+ ++++
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+L A E+ + G+ + Y+ LI L ++ R A L ++ G P
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI-CCFCGIGRSGEAVSLM 508
+ YN L+ K + L L D+M IKP++ T+ LI C E V M
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC------RKEGVVTM 623
Query: 509 D----EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
D EML+ ++PD + +I Y + +V KA +L + D +YN++
Sbjct: 624 DKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D +S++ L G P T +I L
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGL 719
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 177/361 (49%), Gaps = 1/361 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G + + R+ ++ G P++ + N L+NG + +C++ +EM + GI PN
Sbjct: 405 FCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPN 464
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK+ + L + G P+ YN LI + C +L DAF +
Sbjct: 465 VISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFD 524
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + LVTY TL+NGL + G+V++A LF +M +G +PD+++YN+LI Y K
Sbjct: 525 EMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSV 584
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
Q+ L +M GI P T ++ KEG +++ + E+ + + + +Y+
Sbjct: 585 NTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG-VVTMDKMFQEMLQMDLVPDQFVYN 643
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I + +D A SL +++ G YN L+ + + V++ L D+M +
Sbjct: 644 EMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P + TY LI C + A EM+E G+L + +C LI+G E + +A
Sbjct: 704 GLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA 763
Query: 540 E 540
+
Sbjct: 764 Q 764
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 1/229 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++++ F + G P +++ N L++G K +C ++Y++M +GI P TF
Sbjct: 549 GRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTF 608
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L + C+ V ++ +++ + PD YN +I SY + G + A L++ M
Sbjct: 609 HPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVD 667
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ V D VTY +L+ ++ +V E L M +GL P + +YN LI C
Sbjct: 668 QGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNG 727
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+ EM+ G+ + C ++ G +EG L A + EL G++
Sbjct: 728 AYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGLN 776
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 150/327 (45%), Gaps = 17/327 (5%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQ---SDSVSA 109
P + +++ +C K D+ + L + + P+ EI +L+ S A
Sbjct: 463 PNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPN---AEIYNMLIEASCSLSKLKDA 519
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
FF+ + I T Y +++ L N + A + ++ K C V + L
Sbjct: 520 FRFFDEMIQS-GIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG--KGCNPDVITYNSL 576
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
IS Y K ++ + + K +G +P++ + + L+ K + ++++
Sbjct: 577 IS-------GYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVV-TMDKMFQ 628
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM ++ + P+ +N + + + ++G+V K +++ ++G D D VTYN+LI +Y +
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R+++ +L M + ++P + TY L+ GLC A+ + MV RGL ++
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCY 748
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGI 376
LI +EG ++E++ + E+ G+
Sbjct: 749 QLISGLREEGMLREAQIVSSELSIGGL 775
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 121/333 (36%), Gaps = 98/333 (29%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L+ M G P S N L+ +++ ++ +++ +G PD
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVA----- 159
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
YGK A+ V L+ ++ F L++ + +DG
Sbjct: 160 --YGK------AVQAAVMLKDL-------------------DKGF---ELMKSMVKDGMG 189
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP------------------------ 483
PS+ YN ++ LCK + DA L DEM+ RN+ P
Sbjct: 190 PSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGF 249
Query: 484 -----------SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP-------------- 518
+L TY +L+ CG GR +A ++ EM SG LP
Sbjct: 250 KERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNG 309
Query: 519 --------------DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
D + +L+NG C + KAE +L + SYN + N
Sbjct: 310 AGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNA 369
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ ++GD+ K + ++ G PN +T +I
Sbjct: 370 YCQEGDVKKAILTTEQMEERGLEPNRITFNTVI 402
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 71/167 (42%)
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
AT L + +DG+VPS N L+ +L L + +++D +P Y +
Sbjct: 106 ATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQ 165
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
+ + LM M++ GM P +++ G C + + A L ++ +
Sbjct: 166 AAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVP 225
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+T +YN + + + + G + + + ++R N +T +++ L
Sbjct: 226 NTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGL 272
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 199/400 (49%), Gaps = 4/400 (1%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V+ ++NGLL+ +D+ + +++ M G P+ T++ + K +DK
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 266
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ + G PD + Y +L+ YC G+ +A +++ M R V PD+VTYT LM+ LCK G
Sbjct: 267 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 326
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K EA ++F +V RG PD +Y TL+ Y EG + E LL MM G+
Sbjct: 327 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 386
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV--ALCQDNRPFAATSLLERIG 442
+I+ Y K ++ AL + +++ G ++ DI +Y V LC R A S +
Sbjct: 387 MIMGAYAKHNKVDEALLVFSNMRQQG--LNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P++ ++ L+ LC CD L EM+DR I + A++ C GR
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 504
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA +L D M+ G+ P++ LI+GYC++ +++A LLG +YN +
Sbjct: 505 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 564
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N ++++G + + L + G P +T + ++ L++
Sbjct: 565 NGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQ 604
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 197/430 (45%), Gaps = 28/430 (6%)
Query: 101 RCQSDSVSALTFFNWVKNDLEI---------------KPTSSNYCLIVHILAWNNKFSFA 145
RC D V+ T N + + ++ P Y I+ L+ A
Sbjct: 202 RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKA 261
Query: 146 MKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
++ +V+ ++ DC ++ L+ Y G +E+ F+K G +P
Sbjct: 262 TQVFTRMVKNGVMPDCI----MYTSLV-------HGYCSSGKPKEAIGIFKKMCRHGVEP 310
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+V+ L++ L K + ++++ + + G P++ T+ L H + G + +++ L
Sbjct: 311 DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLL 370
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ + ++G +N ++ +Y K ++++A ++ M ++ + PD+V Y T+++ LC
Sbjct: 371 DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTA 430
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V +A F+ + GL+P+IV + TLI C K + + L +EM+ GI DT
Sbjct: 431 GRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFF 490
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ K+GR++ A NL + R G+ + + Y+ LI C D + A LL +
Sbjct: 491 NAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVF 550
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G PS YN ++ + + D L L EM + + P + TY L+ GR+
Sbjct: 551 NGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVA 610
Query: 504 AVSLMDEMLE 513
A L M++
Sbjct: 611 AKELYLRMIK 620
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 152/368 (41%), Gaps = 42/368 (11%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAF------------------------------------Y 296
P++ TY +I + GRL+ AF
Sbjct: 97 PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-HRGLSP-DIVSYNTLIFA 354
+ R M PDL +YT L+ GLC + ++A L H M H+G P D+V+Y T+I
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+EG++ ++ SL M+ G PD T I+ K + A + + + GV
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+Y L+ C +P A + +++ + G P + Y LM+ LCK +A + D
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+V R KP +TY L+ + G E L+D M++ GM I +++ Y
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 396
Query: 535 DVNKAEALLGFFAKKFQIY--DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
V+ EALL F + Q D +Y V ++ G + + G APN +
Sbjct: 397 KVD--EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVV 454
Query: 593 CKYMIHSL 600
+IH L
Sbjct: 455 FTTLIHGL 462
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 42/313 (13%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG---IYPDTFTCQ 384
+AHQ+F R++ RG I N + + + SL M G P+ T
Sbjct: 45 DAHQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGATSAAPNIATYG 103
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL-LERIGQ 443
I++ + GRL A V + G+ +S ++ L+ LC R A + L R+ +
Sbjct: 104 IVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPE 163
Query: 444 DGYVPSLEIYNELMESLC--------------------KC-------DSVADALL----- 471
G P L Y L++ LC +C +V + LL
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 223
Query: 472 -----LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
L D M+DR P + TY ++I +A + M+++G++PD + L
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
++GYC +A + + D +Y A+ + ++G ++ ++ ++ G
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 343
Query: 587 APNNLTCKYMIHS 599
P++ T ++H
Sbjct: 344 KPDSTTYGTLLHG 356
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 199/400 (49%), Gaps = 4/400 (1%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V+ ++NGLL+ +D+ + +++ M G P+ T++ + K +DK
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ + G PD + Y +L+ YC G+ +A +++ M R V PD+VTYT LM+ LCK G
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 327
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K EA ++F +V RG PD +Y TL+ Y EG + E LL MM G+
Sbjct: 328 KSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFN 387
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV--ALCQDNRPFAATSLLERIG 442
+I+ Y K ++ AL + +++ G ++ DI +Y V LC R A S +
Sbjct: 388 MIMGAYAKHNKVDEALLVFSNMRQQG--LNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P++ ++ L+ LC CD L EM+DR I + A++ C GR
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA +L D M+ G+ P++ LI+GYC++ +++A LLG +YN +
Sbjct: 506 EAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTII 565
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N ++++G + + L + G P +T + ++ L++
Sbjct: 566 NGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQ 605
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 197/430 (45%), Gaps = 28/430 (6%)
Query: 101 RCQSDSVSALTFFNWVKNDLEI---------------KPTSSNYCLIVHILAWNNKFSFA 145
RC D V+ T N + + ++ P Y I+ L+ A
Sbjct: 203 RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKA 262
Query: 146 MKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
++ +V+ ++ DC ++ L+ Y G +E+ F+K G +P
Sbjct: 263 TQVFTRMVKNGVMPDCI----MYTSLV-------HGYCSSGKPKEAIGIFKKMCRHGVEP 311
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+V+ L++ L K + ++++ + + G P++ T+ L H + G + +++ L
Sbjct: 312 DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLL 371
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ + ++G +N ++ +Y K ++++A ++ M ++ + PD+V Y T+++ LC
Sbjct: 372 DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTA 431
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V +A F+ + GL+P+IV + TLI C K + + L +EM+ GI DT
Sbjct: 432 GRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFF 491
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ K+GR++ A NL + R G+ + + Y+ LI C D + A LL +
Sbjct: 492 NAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVF 551
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G PS YN ++ + + D L L EM + + P + TY L+ GR+
Sbjct: 552 NGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVA 611
Query: 504 AVSLMDEMLE 513
A L M++
Sbjct: 612 AKELYLRMIK 621
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 138/321 (42%), Gaps = 4/321 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG-LCKEG-KVREAH 330
P++ TY +I + GRL+ AF + + + + G LC G +
Sbjct: 97 PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMD 156
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYP-DTFTCQIIVQ 388
+ RM G PD+ SY L+ C + Q++ LL+ M + G P D ++
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVIN 216
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G +EG+L A +L + G S Y +I AL + AT + R+ ++G +P
Sbjct: 217 GLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+Y L+ C +A+ + +M ++P + TY AL+ C G+S EA +
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 336
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D +++ G PDS L++GY E + + LL KK +N + +A+
Sbjct: 337 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKH 396
Query: 569 GDLSKLMELQKRFLRLGFAPN 589
+ + + + + G P+
Sbjct: 397 NKVDEALLVFSNMRQQGLNPD 417
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 126/316 (39%), Gaps = 47/316 (14%)
Query: 328 EAHQLFHRMVHRG-------------------------------------LSPDIVSYNT 350
+AHQ+F R++ RG +P+I +Y
Sbjct: 45 DAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIATYGI 104
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY--GKEGRLLSALNLVVELQR 408
+I + G++ + + + ++ G+ + Q QG GR A+ + + L+R
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGR---AMRMDIVLRR 161
Query: 409 FG-VSISRDIYDYLIV--ALCQDNRPFAATSLLERIG-QDGYVP-SLEIYNELMESLCKC 463
+ D++ Y I+ LC D A LL + G P + Y ++ L +
Sbjct: 162 MPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLRE 221
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ A L D M+DR P + TY ++I +A + M+++G++PD +
Sbjct: 222 GQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMY 281
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L++GYC +A + + D +Y A+ + ++G ++ ++ ++
Sbjct: 282 TSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVK 341
Query: 584 LGFAPNNLTCKYMIHS 599
G P++ T ++H
Sbjct: 342 RGHKPDSTTYGTLLHG 357
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 219/482 (45%), Gaps = 44/482 (9%)
Query: 161 HSVDVFQD-----LISCTEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
SV VF++ L+ +CN A K G I+E+ F + G +P ++S LL
Sbjct: 241 ESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALL 300
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G CI ++ M G+ P+ H FN L + + + G +DK E + ++G +
Sbjct: 301 HGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVN 360
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY------------------- 313
PD++T++T+IS++C+ GRL+DA + M V PD Y
Sbjct: 361 PDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKEL 420
Query: 314 -----------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
T+++N LCKEG+V E + ++H G P+++++N+L+ YC
Sbjct: 421 ISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYC 480
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
G M+E+ LL M G+ PD +T +V GY K GR+ AL L ++ V+++
Sbjct: 481 LVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSV 540
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ ++ L Q R A + + + G S+ Y ++ LC+ + +A +L +++
Sbjct: 541 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
N+K + T+ +I +GR EA L + G++P RV+I E+
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 660
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A+ L K D+ N + M G+++K + + G P T +
Sbjct: 661 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 720
Query: 597 IH 598
I+
Sbjct: 721 IY 722
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 185/386 (47%), Gaps = 1/386 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + ++ F K + G P++V+ + L+NGL K +D+ +V +M G+ P
Sbjct: 162 GFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRP 221
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L H + +G + +++ PD+ N+ +++ CK GR+ +A ++
Sbjct: 222 NNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIF 281
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD+++Y L++G G + LF+ MV G+ PD +NTLI AY +
Sbjct: 282 DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARL 341
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M +S + +M G+ PD T ++ + + GRL A+ + GV +Y
Sbjct: 342 GMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVY 401
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPS-LEIYNELMESLCKCDSVADALLLKDEMV 477
LI C A L+ + G P ++ + ++ +LCK VA+ + D ++
Sbjct: 402 SCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLII 461
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+P+L T+ +L+ +C +G EAV L+D M G+ PD L++GYC ++
Sbjct: 462 HTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRID 521
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFN 563
A L K + SYN + +
Sbjct: 522 DALTLFRDMLHKRVTLTSVSYNIILH 547
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 188/391 (48%), Gaps = 36/391 (9%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L+N + D V+ + R G+ P+ ++N L F K G+VDK +
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+EE+G P++VTY++LI+ CK ++ A + R M V P+ +TY L++G
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G +E+ ++F M L PD+ + N+ + A CK G+++E++ + M+ G PD +
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ GY G + NL V +C+
Sbjct: 296 YGALLHGYATAGCIAGMDNL------------------FNVMVCE--------------- 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G VP ++N L+ + + + +LL+ ++M + + P + T+ +I FC +GR
Sbjct: 323 --GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLD 380
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTESYNAV 561
+A+ + M+++G+ PD+ + LI G C +D+ KA+ L+ +K + + ++
Sbjct: 381 DAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSI 440
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N ++G +++ ++ + G PN +T
Sbjct: 441 INNLCKEGRVAEGKDVVDLIIHTGQRPNLIT 471
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 198/434 (45%), Gaps = 7/434 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G+ +ES + F++ P + +CN + L K I + +++ M G P
Sbjct: 232 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 291
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++ L H + G + ++ + EG PD +NTLI++Y + G ++ + ++
Sbjct: 292 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 351
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V PD++T++T+++ C+ G++ +A + F+ M+ G+ PD Y+ LI C
Sbjct: 352 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Query: 359 GKMQESKSLLYEMMGNGIYPDT---FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ ++K L+ +M+ GI P FT I+ KEGR+ ++V + G +
Sbjct: 412 RDLVKAKELISDMLSKGIPPPCIKFFTS--IINNLCKEGRVAEGKDVVDLIIHTGQRPNL 469
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
++ L+ C A LL+ + G P + YN L++ CK + DAL L +
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 529
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ + + + +Y ++ R+ A + EM+ESGM ++ G C
Sbjct: 530 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNC 589
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
++A LL +D ++N V + G + EL G P LT +
Sbjct: 590 TDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRV 649
Query: 596 MIHSLWKGMERKFQ 609
MI +L K E F+
Sbjct: 650 MITNLIK--EESFE 661
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I ++N L K + + V + + G PN TFN L +C G++ + G
Sbjct: 432 PCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGL 491
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ +E G +PD+ TYNTL+ YCK GR++DA L+R M + V V+Y +++GL +
Sbjct: 492 LDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQ 551
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G++ I +Y T++ C+ E+ LL ++ + D T
Sbjct: 552 ARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILT 611
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 612 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P I NE++ L VA A ++ + I P +T LI F G+
Sbjct: 672 KSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYR 731
Query: 503 EAVSLMDE 510
E + L+ E
Sbjct: 732 EYIKLLPE 739
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L + VS N +L+GL + +++ EM G+
Sbjct: 513 GYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAV 572
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ + C+N D+ N LEK+ D++T+N +I + K GR +A L+
Sbjct: 573 SIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELF 632
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P ++TY ++ L KE +A LF M +PD N +I +
Sbjct: 633 AAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNK 692
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
G++ ++ + L ++ GI P+ T +++ + G+ + L+ E RF
Sbjct: 693 GEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRF 743
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 31/223 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
ALT F + + + TS +Y +I+H L + A +M E++E S+ +
Sbjct: 523 ALTLFRDMLHK-RVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE--SGMAVSIHTYAT 579
Query: 169 LI------SCTEDCNW----------------------AYVKVGLIRESFKTFRKTLDVG 200
++ +CT++ N A KVG +E+ + F G
Sbjct: 580 VLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYG 639
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P+I++ ++ L+K + ++ M + P++ N + + G+V K
Sbjct: 640 LVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAG 699
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+L KI+++G P+ T + LI + G+ + L YR
Sbjct: 700 NYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYR 742
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 239/524 (45%), Gaps = 18/524 (3%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
L+ ++ LL L + VLL QSD AL FF W + YC+++ +L+
Sbjct: 37 LEGKMRHLLRGLKPRLVCAVLLS-QSDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSK 95
Query: 139 NNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL 197
A ++L +V ++ P QD +Y + G +R + +
Sbjct: 96 TKLCQGARRVLRLMVRRGIQRTP------QDFCCVM----VSYSRAGKLRNAMQVLTMMQ 145
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
G +P+++ CN ++ L+ N +++ + E M +GI PN T+N L +C D+
Sbjct: 146 KAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYC---DLH 202
Query: 258 KVNGFLEKIEE---EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+V +E I E +G PD V+Y T++ CK R+ + + M +L D VTY
Sbjct: 203 RVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYN 262
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
TL++ LCK EA Q RG D V Y+ ++ +YCKEG+M ++K ++ EM
Sbjct: 263 TLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTR 322
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G PD T I+ G+ + G + A ++ ++ + G + Y + LCQ A
Sbjct: 323 GCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEA 382
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+++ + + P+ Y+ +M + ++DA + EM+ + P+ L+
Sbjct: 383 REMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQS 442
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C IGR EA M+E L G ++ +I+ +C + D+ A +LL + D
Sbjct: 443 LCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPD 502
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+Y + + + G + + EL + L+ G P +T + +IH
Sbjct: 503 AVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIH 546
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 210/468 (44%), Gaps = 38/468 (8%)
Query: 133 VHILAWNNKFSFAMKMLCELVELVKDCP---------------HSVDVFQDLIS------ 171
+H+L N A++ L E ++L+ P H V+ +LIS
Sbjct: 160 IHVLVMANMLEKALRFL-ERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKG 218
Query: 172 CTEDCNWAYVKVGL------IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
C+ D Y +G IRE K D V+ N L++ L K D+
Sbjct: 219 CSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEAL 278
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
Q E + G + ++ + +CK G +D+ + ++ G PD+VTY +I+ +
Sbjct: 279 QFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGF 338
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ G + A + + MY+ P+ V+YT + GLC++G EA ++ + +P+
Sbjct: 339 SQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNA 398
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++Y+ ++ + +EGK+ ++ ++ EM+G G +P +++Q + GR+ A + E
Sbjct: 399 ITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEE 458
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
G +++ + +I CQ + AA SLL+ + P Y ++++L K
Sbjct: 459 CLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGR 518
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +A L +M+ + I P+ TYR +I + IGR + ++L+D+ML Q CR
Sbjct: 519 IEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKML------TRQECRT 572
Query: 526 ----LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+I C ++ A+ LLG + D + + + + G
Sbjct: 573 AFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKG 620
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 175/388 (45%), Gaps = 30/388 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K G + ++ + + G P +V+ ++NG + + Q ++ ++M + G P
Sbjct: 302 SYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKP 361
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT ++ C+ G+ + ++ EE+ + P+ +TY+ ++ + ++G+L+DA +
Sbjct: 362 NTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVV 421
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + P V L+ LC+ G+V EA + ++ G + + V++ T+I +C++
Sbjct: 422 REMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQ 481
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ + SLL +M + +PD T I+ GK+GR+ A L +++ + G+
Sbjct: 482 DDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGI------- 534
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL--------------EIYNELMESLCKCD 464
D P +++ R GQ G V L +N+++E LC
Sbjct: 535 ---------DPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFG 585
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ A L +++ + +T L+ + G A + M ++PD ++C
Sbjct: 586 NLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCE 645
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ E +A+ L F ++ I
Sbjct: 646 KVCKKLMQEGKSEEADNLFLRFVERGNI 673
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 153/320 (47%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ SY + G+L +A + +M + + P+L+ T ++ L + +A + RM G
Sbjct: 124 VMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLG 183
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++V+YN LI YC +++++ L+ EM G PD + ++ K R+ +
Sbjct: 184 IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+++ +++ + + Y+ LI LC+ A L + G+ Y+ +++S
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSY 303
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + A + +EM R P + TY A+I F G G+A ++ +M + G P++
Sbjct: 304 CKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNT 363
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ G C + + ++A ++ +++ + +Y+ V + F +G LS ++ +
Sbjct: 364 VSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVRE 423
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ GF P + ++ SL
Sbjct: 424 MIGKGFFPTPVEINLLLQSL 443
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 170/312 (54%), Gaps = 1/312 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LLN L+KL+ ++ ++++E R C +T TFNIL C G +K L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVR 327
G +PD+VTYNTLI +CK LN A +++ + +V PD+VTYT++++G CK GK+R
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L M+ G+ P V++N L+ Y K G+M ++ + +M+ G +PD T ++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + G++ L E+ G+ + Y LI ALC +NR A LL ++ +
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +YN +++ CK V +A ++ +EM + KP T+ LI C GR EAVS+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 508 MDEMLESGMLPD 519
+M+ G PD
Sbjct: 475 FHKMVAIGCSPD 486
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 170/358 (47%), Gaps = 5/358 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+LT CK G D E ++ +G P+ L+SS+ +KG+L+ A L ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LL 162
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V + +L+N L K +V +A +LF + D ++N LI C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
+++ LL M G G PD T ++QG+ K L A + +++ G S D+ Y
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYT 281
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C+ + A+SLL+ + + G P+ +N L++ K + A ++ +M+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + T+ +LI +C +G+ + L +EM GM P++ +LIN C E + KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LLG A K I YN V + F + G +++ + + + P+ +T +I
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 125/247 (50%), Gaps = 2/247 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ +++G K + + + ++M R+GI P TFN+L + K G++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ G PD+VT+ +LI YC+ G+++ F L+ M R + P+ TY+ L+N LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E ++ +A +L ++ + + P YN +I +CK GK+ E+ ++ EM PD T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL--LER 440
I++ G+ +GR+ A+++ ++ G S + L+ L + A L + R
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 441 IGQDGYV 447
GQ V
Sbjct: 515 KGQSNNV 521
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 38/260 (14%)
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN L + CK G + + M +G+ P+ +V + ++G+L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL---------- 154
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
FA LL+ +G + N L+ +L K D V
Sbjct: 155 ------------------------HFATALLLQSFEVEG---CCMVVNSLLNTLVKLDRV 187
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA+ L DE + T+ LI CG+G++ +A+ L+ M G PD L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 527 INGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
I G+C ++NKA E + D +Y ++ + + + G + + L LRLG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 586 FAPNNLTCKYMIHSLWKGME 605
P N+T ++ K E
Sbjct: 308 IYPTNVTFNVLVDGYAKAGE 327
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 97/227 (42%), Gaps = 47/227 (20%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L I PT+ + ++V + ++ A +ML E ++ S F D+++ T +
Sbjct: 306 LGIYPTNVTFNVLV------DGYAKAGEML--TAEEIRGKMISFGCFPDVVTFTSLID-G 356
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y +VG + + F+ + + G P+ + + L+N L N + + ++ ++ I P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEE------------------------------ 269
+N + FCK G V++ N +E++E++
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 270 -----GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---RNVLP 308
G PD +T ++L+S K G +A++L +I + NV+P
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 187/388 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+N L + + V ++ ++G P+ TFN L C G + +
Sbjct: 142 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEA 201
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K EGF PD+VTY TL++ CK G + A L R M ++N P+++ Y T+++
Sbjct: 202 LHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDS 261
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF M+ +G+SPDI +YN+LI A C + + +LL EM+ + I P+
Sbjct: 262 LCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 321
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG + A ++V + + GV Y L+ C + A + +
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 381
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G VP++ YN L+ C+ + A+ L ++M + + TY LI C +G
Sbjct: 382 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 441
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R A++L EM+ SG +PD R+L++ C + +A LL D YN
Sbjct: 442 RLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 501
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+ G+L +L GFA
Sbjct: 502 IAIDGMCRAGELEAARDLFSNLSCQGFA 529
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 199/415 (47%), Gaps = 35/415 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ +F + L + PS V LL + K+ + +M GI P+ +T NIL
Sbjct: 95 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC + L K+ + G PD T+NTLI C +G++ +A +L+
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+VTY TLMNGLCK G A +L MV + P++++YNT+I + CK+ ++ E+ +L
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ GI PD FT Y+ LI ALC
Sbjct: 275 FSEMITKGISPDIFT-----------------------------------YNSLIHALCN 299
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
T+LL + +P++ +++ ++++LCK +A A + D M+ R ++P + T
Sbjct: 300 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 359
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y AL+ C EAV + D M+ G +P+ + +LINGYC + ++KA LL +
Sbjct: 360 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 419
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ I DT +YN + + G L + L + G P+ +T + ++ L K
Sbjct: 420 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 172/365 (47%), Gaps = 16/365 (4%)
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLD 198
+ +A +L +L++L C F LI C E G I E+ F KT+
Sbjct: 162 RLGYAFSVLAKLLKL--GCQPDNTTFNTLIRGLCVE---------GKIGEALHLFDKTIG 210
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GFQP +V+ L+NGL K+ ++ M + PN +N + CK+ V +
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ +G PD+ TYN+LI + C L M ++P++V ++T+++
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
LCKEG + AH + M+ RG+ PD+V+Y L+ +C +M E+ + M+ G P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ + I++ GY + R+ A+ L+ ++ G+ Y+ LI LC R A +L
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ G +P L Y L++ LCK +A+A++L + N+ + Y I C
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC-- 508
Query: 499 GRSGE 503
R+GE
Sbjct: 509 -RAGE 512
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++H L ++ +L E+V K P+ V VF ++ A
Sbjct: 283 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN-SKIMPNVV-VFSTVVD-------ALC 333
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+I + + G +P +V+ L++G + +D+ +V++ M G PN
Sbjct: 334 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 393
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++NIL + +C+ +DK G LE++ +G D VTYNTLI C GRL A L+ M
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 453
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+PDLVTY L++ LCK + EA L + L DI+ YN I C+ G++
Sbjct: 454 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 513
Query: 362 QESKSLLYEMMGNG 375
+ ++ L + G
Sbjct: 514 EAARDLFSNLSCQG 527
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 139/299 (46%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M + P V +T L+ + K L +M G+ PD+ + N
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI ++C ++ + S+L +++ G PD T +++G EG++ AL+L + G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
Y L+ LC+ AA LL + Q P++ YN +++SLCK V +A
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM+ + I P + TY +LI C + +L++EM+ S ++P+ + +++
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C E + A ++ K+ D +Y A+ + ++ + +++ + G PN
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPN 391
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K F + G P++ S N L+NG ++ +D+ + E+M G+ +T T+N L
Sbjct: 375 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 434
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C G + ++ G PDLVTY L+ CK L +A L + + N+
Sbjct: 435 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD 494
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
D++ Y ++G+C+ G++ A LF + +G +
Sbjct: 495 ADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+++ DAL + M+ + PS + L+ + +SL +M G+ PD
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+LIN +C + + A ++L K D ++N + +G + + + L + +
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 584 LGFAPNNLTCKYMIHSLWK 602
GF P+ +T +++ L K
Sbjct: 211 EGFQPDVVTYGTLMNGLCK 229
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 179/349 (51%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +GF+P +V+ LLNG N I+ +++++ +G PN T+ L CKN
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
++ ++ G P++VTYN L++ C+ GR DA +L R M +R + P+++T+T
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ K GK+ EA +L++ M+ + PD+ +Y +LI C G + E++ + Y M N
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G YP+ ++ G+ K R+ + + E+ + GV + Y LI C RP A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ ++ P + YN L++ LC V AL++ + M R + ++ TY +I
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
C +G+ +A L + GM P+ +I+G+C +++A++L
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 196/398 (49%), Gaps = 6/398 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ LL+ + K+N D ++E+M +GI P T NI+ H C + + + F
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + GF+PDLVT+ +L++ YC R+ DA L+ + P++VTYTTL+ LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A +LF++M G P++V+YN L+ C+ G+ ++ LL +MM I P+ T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 383 CQIIVQGYGKEGRLLSALNLV-VELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLE 439
++ + K G+L+ A L V +Q +S+ D++ Y LI LC A +
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQ---MSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++G P+ IY L+ CK V D + + EM + + + TY LI +C +G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R A + ++M PD + VL++G C V KA + + K+ + +Y
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + G + +L G PN +T MI
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 180/355 (50%), Gaps = 1/355 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
DL++ T N Y I ++ F + L +GF+P++V+ L+ L K ++ ++
Sbjct: 152 DLVTFTSLLN-GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ +MG G PN T+N L C+ G L + + +P+++T+ LI ++ K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G+L +A LY +M + +V PD+ TY +L+NGLC G + EA Q+F+ M G P+ V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y TLI +CK ++++ + YEM G+ +T T +++QGY GR A + ++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
Y+ L+ LC + + A + E + + ++ Y +++ +CK V
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
DA L + + +KP++ TY +I FC G EA SL +M E G LP+ +
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 163/345 (47%), Gaps = 10/345 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + + KP Y ++ L N + A+++ ++ +V +
Sbjct: 172 AIALFDQILG-MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG--TNGSRPNVVTYNA 228
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ ++G ++ R + +P++++ L++ +K+ + + ++Y
Sbjct: 229 LVT-------GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M ++ + P+ T+ L + C G +D+ +E G P+ V Y TLI +CK
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
R+ D ++ M ++ V+ + +TYT L+ G C G+ A ++F++M R PDI +Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N L+ C GK++++ + M + + T II+QG K G++ A +L L
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+ + Y +I C+ A SL +++ +DG++P+ +Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 2/324 (0%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+Y ++ + + NDA L+ M LP ++ +T L++ + K + LF +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G+ P + + N ++ C + + L +MM G PD T ++ GY R+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A+ L ++ G + Y LI LC++ A L ++G +G P++ YN L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ DA L +M+ R I+P++ T+ ALI F +G+ EA L + M++ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES-YNAVFNMFAEDGDLSKLM 575
PD LING CM +++A + + ++ Y E Y + + F + + M
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHS 599
++ + G N +T +I
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQG 372
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 150/564 (26%), Positives = 240/564 (42%), Gaps = 72/564 (12%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V AL F + D P Y +VH L KF A ML E+V + C F
Sbjct: 109 VEALEHFRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMV--AQGCAPDTVTF 164
Query: 167 QDLIS--CTEDCNWAYVKV---------GLIRESFKTF--------------RKTLDV-- 199
LI C +V G +F+T K L V
Sbjct: 165 STLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVI 224
Query: 200 --GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
GF P+++ N ++NG K +D +++ E M G PN TF IL CK V
Sbjct: 225 AKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVG 284
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ LEK+ G P++VTY+T+I+ CK+G+++DA+ L+++M RRN P++VT+ L+
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILI 344
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI- 376
+GLCK ++ EA QL+HRM G +PDI++YN+LI CK ++ E+ L + +G+
Sbjct: 345 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 404
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+ T + GY GR+ A + L G S Y LI+ C+ +R
Sbjct: 405 AANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVE 464
Query: 437 LLERIGQDGYVPSLE-----------------------------------IYNELMESLC 461
L+E + G+ P + IYN ++E +
Sbjct: 465 LVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMA 524
Query: 462 KCDSVADALLLKDEMV---DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ AL + ++++ DR PS S AL+ C +G++ +A L+ +M E G
Sbjct: 525 RASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAA 584
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
L++G + ++A + + + N V + + EL
Sbjct: 585 AVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELV 644
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+R +LG P+ TC +I K
Sbjct: 645 QRMSKLGCCPDIETCNTLIGGYCK 668
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 222/473 (46%), Gaps = 13/473 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT + L+++ A K+L ++E K C +V F LI+ K
Sbjct: 230 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIE--KGCVPNVFTFTILIT-------GLCKA 280
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ + K + G P++V+ + ++NGL K +D +++++ M R PN T
Sbjct: 281 NRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTH 340
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL CK +++ ++ E G PD++TYN+LI CK ++++AF L++ +
Sbjct: 341 NILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPE 400
Query: 304 RNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V + VTY+TL +G G++ +A ++F +V +G SPD+ +Y +LI YCK +
Sbjct: 401 SGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAV 460
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E L+ EM G P T ++ G + A+ L + G + IY+ ++
Sbjct: 461 EVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVV 520
Query: 423 VALCQDNRPFAATSLLERI---GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+ + ++ A ++LE++ + PS + L+ESLC+ DA L +M +R
Sbjct: 521 EGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSER 580
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++S+Y L+ + R EA + + M+ +G P+ V+I+ C V+ A
Sbjct: 581 GFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA 640
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L+ +K D E+ N + + + G +L + G PN+ T
Sbjct: 641 YELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTT 693
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 198/432 (45%), Gaps = 40/432 (9%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
++ SCN L+ L +LN + ++ M RI + PN T+ IL F GD+D
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICM-PNKFTYGILIRGFSSAGDLDIAIQL 79
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LE+++ GF+ + V + TL+ C GR+ +A +R M ++ PD++TYT L++ LCK
Sbjct: 80 LEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCK 138
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM----MGN---- 374
GK EA + MV +G +PD V+++TLI CK G +++ +L ++ MGN
Sbjct: 139 AGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAA 198
Query: 375 ----------------------------GIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
G P +++ G+ K L SA L+ +
Sbjct: 199 FETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVM 258
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G + + LI LC+ NR A LLE++ G P++ Y+ ++ LCK V
Sbjct: 259 IEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQV 318
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA L M RN P++ T+ LI C R EA L M E+G PD L
Sbjct: 319 DDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSL 378
Query: 527 INGYCMEKDVNKAEALLGFFAKK-FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
I+G C V++A L + + +Y+ +F+ +A G ++ + + G
Sbjct: 379 IDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKG 438
Query: 586 FAPNNLTCKYMI 597
F+P+ T +I
Sbjct: 439 FSPDLATYTSLI 450
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 162/334 (48%), Gaps = 2/334 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ TY LI + G L+ A L M + V +TTLM GLC G+V EA +
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F R + + +PD+++Y L+ A CK GK E++ +L EM+ G PDT T ++ G K
Sbjct: 115 F-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD-NRPFAATSLLERIGQDGYVPSLE 451
G A ++ ++ + G+ S ++ +I LC N A+ +L + G+ P++
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 233
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
++N ++ CK + A L + M+++ P++ T+ LI C R GEA L+++M
Sbjct: 234 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 293
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ G P+ +ING C + V+ A L ++ + ++N + + + +
Sbjct: 294 VMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 353
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ +L R G AP+ +T +I L K +
Sbjct: 354 EEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 387
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P + + + +L GL + N ++ Q+++ M G + +N++ + DK
Sbjct: 473 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKA 532
Query: 260 NGFLEKI---EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
LE++ + F+P + L+ S C+ G+ +DA L M R + +Y L
Sbjct: 533 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRL 592
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GL + + EA Q+F MV G +P+I + N +I C K+ ++ L+ M G
Sbjct: 593 LSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGC 652
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
PD TC ++ GY K GR A L+ E+ G+ + +D L
Sbjct: 653 CPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 122/283 (43%), Gaps = 4/283 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +G + ++ + F +D GF P + + L+ K + + ++ EEM G P
Sbjct: 417 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YL 297
+T + + + ++ + + G D + YN ++ + + + A L
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536
Query: 298 YRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+++ +R+ P L+ LC+ GK +A QL H+M RG + + SYN L+
Sbjct: 537 EQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGL 596
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ + E+ + M+ G P+ T +++ ++ A LV + + G
Sbjct: 597 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 656
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ + LI C+ R A LLE + + G P+ + ++L+E
Sbjct: 657 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPN-DTTHDLLE 698
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 198/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N + + E+M +GI + +T++I + FC+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R++DA L M PD T+TTL++GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L +MV RG PD+V+Y T++ CK G + + SLL +M I D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + ALNL E+ G+ Y LI LC R A+ LL +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ ++ L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LI G+C K V + L +++ + +T +Y +
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + +G PN LT ++ L K
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 222/472 (47%), Gaps = 10/472 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C S +S ++ KP + + ++H L +NK S A+ ++ ++V+ + C
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ--RGCQP 221
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + +++ K G I + +K + +V N +++GL K +
Sbjct: 222 DLVTYGTVVN-------GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D ++ EM GI P+ T++ L C G + L + E +P++VT++ L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I ++ K+G+L +A LY M +R++ PD+ TY++L+NG C ++ EA +F M+ +
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++V+Y+TLI +CK +++E L EM G+ +T T ++ G+ + +A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ ++ GV + Y+ L+ LC++ + A + E + + P + YN ++E +C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V D L + + + P++ Y +I FC G EA SL+ +M E G LP+S
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
LI + D + L+ D + V NM DG L K
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 625
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 230/486 (47%), Gaps = 21/486 (4%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y + ++ ++ S A+ +L ++++L + D+++ + N Y I
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYE--------PDIVTLSSLLN-GYCHSKRIS 170
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + +++G++P + L++GL N + + ++M + G P+ T+ +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK GD+D L+K+E+ + D+V YNT+I CK ++DA L+ M + +
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ TY++L++ LC G+ +A +L M+ R ++P++V+++ LI A+ KEGK+ E++ L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD------IYDYL 421
EM+ I PD FT ++ G+ RL A ++ F + IS+D Y L
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM------FELMISKDCFPNVVTYSTL 404
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ R L + Q G V + Y L+ + +A ++ +MV +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY L+ C G+ +A+ + + + S M PD ++I G C V
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + K + +YN + + F G + L K+ G PN+ T +I +
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 602 KGMERK 607
+ +R+
Sbjct: 585 RDGDRE 590
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 199/404 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K ID + ++M + I + +N + CK +D
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ +G PD+ TY++LIS C GR +DA L M R + P++VT++ L++
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G+ K R+ + L E+ + G+ + Y LI Q A + +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P++ YN L++ LCK +A A+++ + + ++P + TY +I C G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ + L + G+ P+ +I+G+C + +A++LL + + ++ +YN
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ DGD EL K GFA + T + + L G
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 221/476 (46%), Gaps = 13/476 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L H + + I+C C + + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTYSIFINCF--CRRSQLSL 136
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L K + +G++P IV+ + LLNG I + ++M +G P+T TF
Sbjct: 137 AL-----AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L H + + ++++ + G PDLVTY T+++ CK+G ++ A L + M +
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ D+V Y T+++GLCK + +A LF M ++G+ PD+ +Y++LI C G+ +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--L 421
+ LL +M+ I P+ T ++ + KEG+L+ A L E+ + SI DI+ Y L
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSL 369
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C +R A + E + P++ Y+ L++ CK V + + L EM R +
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY LI F A + +M+ G+ P+ +L++G C + KA
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + D +YN + + G + EL G +PN + MI
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 190/395 (48%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L N L + +D ++ +M + P+ FN L K + V E+++ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
DL TY+ I+ +C++ +L+ A + M + PD+VT ++L+NG C ++ +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD ++ TLI K E+ +L+ +M+ G PD T +V G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + AL+L+ ++++ + IY+ +I LC+ A +L + G P +
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC +DA L +M++R I P++ T+ ALI F G+ EA L DE
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD LING+CM +++A+ + K + +Y+ + F +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ + MEL + + G N +T +IH ++ +
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 200/407 (49%), Gaps = 3/407 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L ++ R G + +V+ L+ GL +D+ ++ EM GI PN ++
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L +CK+G + V ++ E+G +PD+V Y LI S CK G+ A + +M RR
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ P++VTY L+N +CKEG V+EA + +M +G++PD+V+YNTLI +M E+
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309
Query: 365 KSLLYEMM--GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
LL EM+ N + P+ T ++QG GR+ A + ++ G ++ Y+ LI
Sbjct: 310 MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLI 369
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
L + ++ A L++ + G P Y+ L++ CK V A L M DR I+
Sbjct: 370 GGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIE 429
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P L Y L+ C G A +L +EM ++ D +I+G C D+ A+ L
Sbjct: 430 PELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
L + D +Y+ V NMFA+ GD+ + K+ GF P+
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPD 535
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 190/367 (51%), Gaps = 3/367 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + K F + + G +P +V L++ L K+ + V + M R G+ P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N+L + CK G V + G L+K+ E+G PD+VTYNTLI +++A +L
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 299 RIMYR-RNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M R +N++ P++VT+ +++ GLC G++R+A Q+ M G ++V+YN LI
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ K++++ L+ EM G+ PD+FT I+++G+ K ++ A +L+ ++ G+
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+VA+C+ A +L + + + + Y+ ++ CK + A L +
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
VD + P TY +I F G A ++ +M SG LPD + LI GY + ++
Sbjct: 493 VDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEI 552
Query: 537 NKAEALL 543
NK L+
Sbjct: 553 NKVLELI 559
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 183/384 (47%), Gaps = 15/384 (3%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P+ ++D +C K +H + + L P++ + VL+ C S
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN---VLINCMCKEGSVKEA 274
Query: 113 FNWVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
+K E + P Y ++ L+ + AM +L E+V +V F +I
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVI 334
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
D +G +R++F+ + G ++V+ N L+ GLL+++ + + ++ +E
Sbjct: 335 QGLCD-------IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M +G+ P++ T++IL FCK VD+ L + + G +P+L Y L+ + C++G
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGM 447
Query: 291 LNDAFYLYRIMYRRNVLP-DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ A L+ M N P D+V Y+T+++G CK G ++ A +L +V GL+PD V+Y+
Sbjct: 448 MERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYS 505
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I + K G M+ + +L +M +G PD ++QGY +G + L L+ E+
Sbjct: 506 IVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Query: 410 GVSISRDIYDYLIVALCQDNRPFA 433
+++ I L +L N A
Sbjct: 566 NIALDSKIISTLSTSLVASNEGKA 589
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 157/334 (47%), Gaps = 5/334 (1%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMY---RRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D V+YNT++++ C++G + A L R M P+ V+YT LM LC + +A
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L M G+ D+V+Y TLI C ++ ++ L+ EM +GI P+ ++QGY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K GR + VE+ G+ +Y LI +LC+ + A +++ + + G P++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ +CK SV +A+ + +M ++ + P + TY LI + EA+ L++E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 511 MLESGML--PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
M+ + P+ +I G C + +A + + + + +YN +
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K MEL LG P++ T +I K
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCK 409
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 193/364 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E K + G +P +V+ N L+N K +++ + + EM R G+
Sbjct: 238 GYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TF+ FCKNG V + ++ +G P+ VTY L+ CK GRL+DA L
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V ++VTYT L++GLCKEGKV EA +F M G+ + + Y TLI +
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVY 417
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + SLL EM G+ D ++ G +L A +L+ ++ G+ + IY
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ A + + A +LL+++ G+ P++ Y L++ LCK S+ +A+ ++MVD
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVD 537
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P++ Y AL+ C GR +AV L+DEM++ GM D+ +C L++G+ + ++
Sbjct: 538 LGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597
Query: 539 AEAL 542
A AL
Sbjct: 598 AFAL 601
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 239/548 (43%), Gaps = 90/548 (16%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI------------- 170
P+S++ CL HILA F + +L L+ PH DL+
Sbjct: 68 PSSAHLCLAAHILARARLFPHSRSLLSRLLAPGHH-PHLAASLVDLLHRAALALGPRRSA 126
Query: 171 --SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
S + GL+ ++ + ++ P+ +CN +L L + + W+++
Sbjct: 127 LPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLF 186
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY--- 285
E++ PN TFNI+ CK GD+ + L +++ G PD+VTYN+LI Y
Sbjct: 187 EQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKC 242
Query: 286 --------------------------------CKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
CK GR+ A+ + M R V+ ++VT+
Sbjct: 243 GELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTF 302
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+T ++ CK G VREA +LF +M +G+ P+ V+Y L+ CK G++ ++ L EM+
Sbjct: 303 STFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ 362
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLS----------------------------------- 398
G+ + T ++V G KEG++
Sbjct: 363 QGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSER 422
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL+L+ E++ G+ + +Y LI LC + A SLL ++ + G P+ IY +M+
Sbjct: 423 ALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMD 482
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ K ++A+ L +M+D +P++ TY AL+ C G EA+S ++M++ G+ P
Sbjct: 483 ACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEP 542
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ Q L++G C ++KA LL K D ++ + + G+L L+
Sbjct: 543 NVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALK 602
Query: 579 KRFLRLGF 586
+ + G
Sbjct: 603 AKMINSGL 610
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 164/357 (45%), Gaps = 13/357 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y +V + A+ + E+V+ + P +V + L+
Sbjct: 330 MKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQ--QGVPLNVVTYTVLVD-------GLC 380
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ FR G + + + L++G ++ + EM G+ +
Sbjct: 381 KEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVS 440
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L C +D+ L K++E G P+ V Y ++ + K + ++A L + M
Sbjct: 441 LYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKM 500
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P++VTY L++GLCK G + EA F++MV GL P++ +Y L+ CK G++
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
++ LL EM+ G+ D C ++ G+ K+G L A L ++ G+ + D+Y Y
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQL--DLYGYT 618
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ C N A +L + ++G P +YN L+ K ++ +A +L++EM
Sbjct: 619 CFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEM 675
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 167/385 (43%), Gaps = 70/385 (18%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G++RE+ K F + G +P+ V+ L++G K +D + EM + G+
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL 367
Query: 239 NTHTFNILTHVFCKNGDV-----------------------------------DKVNGFL 263
N T+ +L CK G V ++ L
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++++G + D+ Y LI C +L++A L M + P+ V YT +M+ K
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K EA L +M+ G P+IV+Y L+ CK G + E+ S +M+ G+ P+
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAY 547
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+V G K GRL A+ L+ E+ G+S+ DN TSL+
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSL--------------DN--VVCTSLM----- 586
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
DG++ K ++ DA LK +M++ ++ L Y + FC + E
Sbjct: 587 DGHL--------------KQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQE 632
Query: 504 AVSLMDEMLESGMLPDSQICRVLIN 528
A ++ EM+E+G+ PD+ + LIN
Sbjct: 633 AREVLSEMIENGITPDAVVYNCLIN 657
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W + + E+ K + G +P+ V +++ K + + ++M G
Sbjct: 447 WGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFR 506
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+ L CK G +D+ K+ + G +P++ Y L+ CK GRL+ A L
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLL 566
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + + D V T+LM+G K+G +++A L +M++ GL D+ Y ++ +C
Sbjct: 567 LDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCN 626
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+QE++ +L EM+ NGI PD ++ K G + A L E++
Sbjct: 627 LNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 88/200 (44%), Gaps = 4/200 (2%)
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G L A+ + ++ V + +++++ L ++ A L E++ P++
Sbjct: 141 RGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFT 196
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N +++ LCK +A+A L M P + TY +LI + G E L+ EM
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G PD L+N +C + +A + ++ + + +++ + F ++G +
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316
Query: 573 KLMELQKRFLRLGFAPNNLT 592
+ M+L + G PN +T
Sbjct: 317 EAMKLFAQMRMKGMKPNEVT 336
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 192/404 (47%), Gaps = 3/404 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ R D G +P +V+ L+ GL +D ++ EM GI PN ++ L
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H +CK G + V E++ G +PD+V Y LI S C+ G++ A + +M R +
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VTY L+N +CKEG VREA L M +G+ PD+V+YNTLI +M E+ +L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291
Query: 368 LYEMMG--NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EMM + PD T ++ G K G + AL + + G + ++ LI L
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ ++ A L++ + G P Y+ L+ CK V A EM + ++P
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y L+ C G G+A L +EM + L D+ +I+G + AE L
Sbjct: 412 VHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKD 470
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ I D +Y+ NMFA+ GDL+ + K+ GF P+
Sbjct: 471 MIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPD 514
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 193/421 (45%), Gaps = 23/421 (5%)
Query: 203 PSI---VSCNFLLNGLLKLNCIDQCW---QVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
PS+ VS N +L L + C+D +V R+ PN ++ L C +
Sbjct: 51 PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRA 110
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ G L +++ G PD+VTY TLI C ++ A L M + P++V Y+ L
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++G CK G+ ++F M RG+ PD+V Y LI + C+ GK++++ ++ M G+
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ T +++ KEG + AL+L + GV Y+ LI L A +
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290
Query: 437 LLERI--GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
LLE + G+ P L +N ++ LCK + AL ++ M + + +L + LI
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGG 350
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
+ + +A+ LMDEM SG+ PDS +LING+C + V +AE+ L + +
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY-------MIHSLWKGMERK 607
Y + + G + + +L F + CK MIH +K E+K
Sbjct: 411 PVHYIPLLKAMCDQGMMGQARDL--------FNEMDRNCKLDAAAYSTMIHGAFKSGEKK 462
Query: 608 F 608
Sbjct: 463 I 463
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 217/493 (44%), Gaps = 53/493 (10%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
D ++P Y ++ L A+++L E+ E +V V+ L+
Sbjct: 121 QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCE--SGIEPNVVVYSCLL------- 171
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
Y K G K F + G +P +V L++ L + + + +V + M G+
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N+L + CK G V + + + E+G PD+VTYNTLI+ +++A L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291
Query: 298 YRIMYR--RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
M + V PDL+T+ ++++GLCK G +R+A Q+ M G ++V++N LI
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ K++++ L+ EM +G+ PD+FT I++ G+
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGF------------------------- 386
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
C+ + A S L + G P Y L++++C + A L +E
Sbjct: 387 ----------CKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE 436
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCM 532
M DRN K + Y +I G +SGE A + +M++ G++PD+ + IN +
Sbjct: 437 M-DRNCKLDAAAYSTMI---HGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAK 492
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
D+ AE +L + D ++++ + GD K++EL + A +
Sbjct: 493 SGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKI 552
Query: 593 CKYMIHSLWKGME 605
++ SL +E
Sbjct: 553 ISTIVTSLGASIE 565
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 208/425 (48%), Gaps = 22/425 (5%)
Query: 47 PLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDS 106
P F N +VDLI + + L+ LK P H+ LL +DS
Sbjct: 26 PFSRFNSSCVNIPDVVDLI------AKQYWSELKTHLKSTNPIALLHQ----LLTSGADS 75
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP-----H 161
L +F W + +L++ + ++H LA+ K+S L V+ K+ P H
Sbjct: 76 DLTLRYFTWSQKELKLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQNDKNYPVSFIFH 135
Query: 162 SVDVFQDLISC----TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ V D + WA K R F+ F++ D G + S+ SCN L++GL+K
Sbjct: 136 AISVSGDSFCANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVK 195
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ D + +EM GICPN TFNIL FC + +V ++ +G P++VT
Sbjct: 196 MYKADA---ILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVT 252
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN+LI+ C G++N+A L M + P+++T+ L+NG CK V++A +LF M
Sbjct: 253 YNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMP 312
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ ++P++ +YN LI AYCK+ M+++ +L M+G G+YPD T ++ G ++G L
Sbjct: 313 KQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLE 372
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A N V E+ + Y+ L+ +LC LL+ + + G PS YN ++
Sbjct: 373 GARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMI 432
Query: 458 ESLCK 462
+ K
Sbjct: 433 DGYSK 437
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 142/302 (47%), Gaps = 3/302 (0%)
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
C N+ +IL KN ++ + G + + N L+S K + A
Sbjct: 145 CANSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVK---MYKADA 201
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ + M + P+ VT+ L++G C + V A ++F M +G+ P++V+YN+LI C
Sbjct: 202 ILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLC 261
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
GK+ E+ +L +M+ + + P+ T ++ G+ K + A L ++ + ++ +
Sbjct: 262 NNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVT 321
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI A C+D A +L + G P + YN L+ LC+ + A EM
Sbjct: 322 TYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEM 381
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+++K L TY L+ C G + + L+DEM + G+ P +I+GY E ++
Sbjct: 382 DTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441
Query: 537 NK 538
+
Sbjct: 442 RQ 443
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 123/240 (51%), Gaps = 9/240 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +++ + S AMK+ E+ + +V + LI+ CN
Sbjct: 213 PNEVTFNILIDGFCNDKNVSVAMKVFAEMNR--QGVKPNVVTYNSLINGL--CN-----N 263
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ +P+I++ N LLNG K + Q +++E+M + I PN T+
Sbjct: 264 GKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTY 323
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL +CK+ +++ + +G PD+ TYN LI C+KG L A M
Sbjct: 324 NILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDT 383
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+++ DL+TY LM+ LC +G++++ +L M +GL P ++YNT+I Y KEG +++
Sbjct: 384 KHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 126/277 (45%), Gaps = 3/277 (1%)
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K K R + F R GL + S N L+ K M ++ ++L EM +GI P+
Sbjct: 159 AKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVK---MYKADAILKEMKADGICPNE 215
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T I++ G+ + + A+ + E+ R GV + Y+ LI LC + + AT+L ++
Sbjct: 216 VTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQ 275
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ P++ +N L+ CK V A L ++M + I P+++TY LI +C
Sbjct: 276 MVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDEN 335
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A +L ML G+ PD LI G C + D+ A + K D +YN
Sbjct: 336 MEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNI 395
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + G++ K + L + G P+ LT MI
Sbjct: 396 LMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMI 432
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 6/271 (2%)
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM---GNGIYP 378
KE K+ + +L RM+H S C + S ++ + G+
Sbjct: 87 KELKLSHSLELTFRMLHSLAYAKKYSKIRSFLDNCVQNDKNYPVSFIFHAISVSGDSFCA 146
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
++ I+V K + +G+ +S + L+ L + + A ++L
Sbjct: 147 NSIIVDILVWADAKNLKTRLGFEAFKRASDYGLKLSVTSCNPLMSGLV---KMYKADAIL 203
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + DG P+ +N L++ C +V+ A+ + EM + +KP++ TY +LI C
Sbjct: 204 KEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 263
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ EA +L D+M+ S + P+ L+NG+C K V +A L K+ + +Y
Sbjct: 264 GKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTY 323
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
N + + + +D ++ L + L G P+
Sbjct: 324 NILIDAYCKDENMEDAFALYRIMLGKGVYPD 354
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
D +K S+++ L+ G+ + +A +++ EM G+ P+ +LI+G+C +K+V+
Sbjct: 176 DYGLKLSVTSCNPLMS---GLVKMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVS 232
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + ++ + +YN++ N +G +++ L+ + + PN +T ++
Sbjct: 233 VAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALL 292
Query: 598 HSLWK 602
+ K
Sbjct: 293 NGFCK 297
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 196/419 (46%), Gaps = 10/419 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y ++H L K A++ML ++ + C + LI
Sbjct: 157 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF--CTPDTITYNVLID-------GLC 207
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP-NT 240
K G + + F + L+ G +P + + N L++G K D + I C +
Sbjct: 208 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDI 267
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
HT+ + KN +++ +EKI G P + TYN L++ CK GRL +A L R
Sbjct: 268 HTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ PD+VTYT+L++GL KE + EA++LF M RGL+ D V Y LI + GK
Sbjct: 328 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGK 387
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ S+ M +G PD T ++ G K GR+ +A+ + ++ G++ + +Y
Sbjct: 388 IPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSA 447
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ + A +L ++ + P YN L++ LCK V A DEM++
Sbjct: 448 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 507
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
KP + TY LI FC G + A + D+M S + LI+G C + + KA
Sbjct: 508 CKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKA 566
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 192/390 (49%), Gaps = 1/390 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I + + F+ G P+ V + L++GL K +D ++ +M + P+T
Sbjct: 138 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 197
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY-LYRI 300
T+N+L CK+GDV+ F +++ E G PD+ TYN LIS +CK G + A + L +
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
D+ TYT +++ L K K+ EA L ++ G +P I +YN L+ CK G+
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++E+ LL +++ NG PD T ++ G GKE R A L E+ G+++ Y
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTA 377
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI L Q + A+S+ + + G VP + + +++ L K + A+ + M R
Sbjct: 378 LIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 437
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P+ Y ALI C + A+ ++ +M ++ PD+ +LI+G C DV A
Sbjct: 438 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
A + D +YN + + F + G+
Sbjct: 498 AFFDEMLEAGCKPDVYTYNILISGFCKAGN 527
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 205/423 (48%), Gaps = 1/423 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + E+ RK +D G P +V+ L++GL K + +++++EM G+ +T
Sbjct: 33 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 92
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + G + + + + + G PD+VT +T+I K GR+ A +++ M
Sbjct: 93 CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 152
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P+ V Y+ L++GLCK K+ A ++ +M +PD ++YN LI CK G +
Sbjct: 153 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV 212
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL-NLVVELQRFGVSISRDIYDY 420
+ +++ EM+ G PD +T I++ G+ K G +A +L E G +I Y
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTA 272
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L ++ + A +L+E+I +G P++ YN L+ LCK + +A+ L ++VD
Sbjct: 273 IVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY +LI RS EA L EM G+ D+ LI + +A
Sbjct: 333 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQAS 392
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + D + + + + ++ G + + + K G APN + +IH L
Sbjct: 393 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 452
Query: 601 WKG 603
K
Sbjct: 453 CKA 455
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 176/355 (49%), Gaps = 2/355 (0%)
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
+++ +EKI G P + TYN L++ CK GRL +A L R + PD+VTYT+
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L++GL KE + EA++LF M RGL+ D V Y LI + GK+ ++ S+ M +G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD T ++ G K GR+ +A+ + ++ G++ + +Y LI LC+ + A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+L ++ + P YN L++ LCK V A DEM++ KP + TY LI F
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 496 CGIGRSGEAV-SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G + A SL E +G D +++ K + +A AL+
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
+YNA+ N + G L + ++L ++ + G P+ +T +I L K +R F+
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK-EKRSFE 355
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 183/424 (43%), Gaps = 1/424 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
++ G I ++ ++ G P +V+ + +++GL K I ++++ M G+ PN
Sbjct: 102 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 161
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++ L H CK +D L ++++ PD +TYN LI CK G + A +
Sbjct: 162 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDE 221
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREA-HQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M PD+ TY L++G CK G A H L G + DI +Y ++ K
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+ +L+ ++ NG P T ++ G K GRL A++L+ ++ G + Y
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI L ++ R F A L + + G Y L+ L + + A + M
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 401
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + T +I GR G AV + M G+ P+ + LI+G C + ++ A
Sbjct: 402 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 461
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+L K F DT +YN + + + GD+ L G P+ T +I
Sbjct: 462 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 521
Query: 600 LWKG 603
K
Sbjct: 522 FCKA 525
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 188/419 (44%), Gaps = 36/419 (8%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I++ + E++ G P T+N L + CK G +++ L KI + G PD+VTY +
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 281 LISSYCKK-----------------------------------GRLNDAFYLYRIMYRRN 305
LI K+ G++ A +Y+ M
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+PD+VT +T+++GL K G++ A ++F M RGL+P+ V Y+ LI CK KM +
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+L +M PDT T +++ G K G + +A E+ G Y+ LI
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241
Query: 426 CQ-DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C+ N A+ SL + +G + Y +++ L K + +A+ L +++ P+
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
++TY AL+ C +GR EA+ L+ +++++G PD LI+G EK +A L
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
A + DT Y A+ + G + + + K G P+ +T MI L K
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 154/318 (48%), Gaps = 9/318 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y IV LA N K A+ ++ ++ C ++ + L++ K+G +
Sbjct: 269 TYTAIVDWLAKNKKIEEAVALMEKIT--ANGCTPTIATYNALLN-------GLCKMGRLE 319
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ RK +D G P +V+ L++GL K + +++++EM G+ +T + L
Sbjct: 320 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 379
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ G + + + + + G PD+VT +T+I K GR+ A +++ M R +
Sbjct: 380 RELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+ V Y+ L++GLCK K+ A ++ +M +PD ++YN LI CK G ++ +++
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 499
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ G PD +T I++ G+ K G +A + ++ S + Y LI LC+
Sbjct: 500 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559
Query: 428 DNRPFAATSLLERIGQDG 445
+ A+ + + + G
Sbjct: 560 RRQLTKASLYFQHMKERG 577
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ EA L ++ G +P I +YN L+ CK G+++E+ LL +++ NG PD T
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G GKE R A L E+ G+++ Y LI L Q + A+S+ + +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G VP + + +++ L K + A+ + M R + P+ Y ALI C + A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ ++ +M ++ PD+ VLI+G C DV A A + D +YN + +
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 565 FAEDGD 570
F + G+
Sbjct: 241 FCKAGN 246
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 101/244 (41%)
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+ +L+ ++ NG P T ++ G K GRL A++L+ ++ G + Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI L ++ R F A L + + G Y L+ L + + A + M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + T +I GR G AV + M G+ P+ + LI+G C + ++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+L K F DT +YN + + + GD+ L G P+ T +I
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240
Query: 600 LWKG 603
K
Sbjct: 241 FCKA 244
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 170/312 (54%), Gaps = 1/312 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LLN L+KL+ ++ ++++E R C +T TFNIL C G +K L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVR 327
G +PD+VTYNTLI +CK LN A +++ + +V PD+VTYT++++G CK GK+R
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L M+ G+ P V++N L+ Y K G+M ++ + +M+ G +PD T ++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + G++ L E+ G+ + Y LI ALC +NR A LL ++ +
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +YN +++ CK V +A ++ +EM + KP T+ LI C GR EAVS+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 508 MDEMLESGMLPD 519
+M+ G PD
Sbjct: 475 FHKMVAIGCSPD 486
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 170/358 (47%), Gaps = 5/358 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+LT CK G D E ++ +G P+ L+SS+ +KG+L+ A L ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LL 162
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V + +L+N L K +V +A +LF + D ++N LI C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
+++ LL M G G PD T ++QG+ K L A + +++ G S D+ Y
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYT 281
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C+ + A+SLL+ + + G P+ +N L++ K + A ++ +M+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + T+ +LI +C +G+ + L +EM GM P++ +LIN C E + KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LLG A K I YN V + F + G +++ + + + P+ +T +I
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 2/251 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ +++G K + + + ++M R+GI P TFN+L + K G++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ G PD+VT+ +LI YC+ G+++ F L+ M R + P+ TY+ L+N LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E ++ +A +L ++ + + P YN +I +CK GK+ E+ ++ EM PD T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL--LER 440
I++ G+ +GR+ A+++ ++ G S + L+ L + A L + R
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 441 IGQDGYVPSLE 451
GQ V LE
Sbjct: 515 KGQSNNVVPLE 525
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 38/260 (14%)
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN L + CK G + + M +G+ P+ +V + ++G+L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL---------- 154
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
FA LL+ +G + N L+ +L K D V
Sbjct: 155 ------------------------HFATALLLQSFEVEG---CCMVVNSLLNTLVKLDRV 187
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA+ L DE + T+ LI CG+G++ +A+ L+ M G PD L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 527 INGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
I G+C ++NKA E + D +Y ++ + + + G + + L LRLG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 586 FAPNNLTCKYMIHSLWKGME 605
P N+T ++ K E
Sbjct: 308 IYPTNVTFNVLVDGYAKAGE 327
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 196/421 (46%), Gaps = 23/421 (5%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKML----------------CELVELVKDCPHSVDVFQD 168
T +YC ++H L + S A ++ ++E + VF
Sbjct: 1 TLHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSG 60
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+ AY++ G +R++ + +R T + F +C +L L+KL W Y
Sbjct: 61 LIT-------AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+E+ G + + FNIL H FCK G++ + I + G P +V+YNTL+S Y +
Sbjct: 114 QEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRL 173
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G L++ F L M+ V PD+ TY+ L+NGLCKE K+ EA++LF M+ GL P V++
Sbjct: 174 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTF 233
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
TLI +CK G++ + + +M+ + PD T ++ G K+G L A L+ E+
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSL 293
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G + Y LI C++ A +R+ Q+ Y L+ LC+ D
Sbjct: 294 KGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 353
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A + EM+ KP TY +I FC G L+ EM G +P VL+N
Sbjct: 354 AEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413
Query: 529 G 529
G
Sbjct: 414 G 414
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 159/385 (41%), Gaps = 36/385 (9%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+++ V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 23 SLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSGLITAYLESGFLRDAIECYRLTR 82
Query: 303 R----------RNVLPDLVT-------------------------YTTLMNGLCKEGKVR 327
R VL L+ + LM+ CKEG +R
Sbjct: 83 EHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIR 142
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A +F + GL P +VSYNTL+ Y + G + E L M +G+ PD +T +++
Sbjct: 143 VAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLI 202
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G KE ++ A L E+ G+ + LI C++ R A + +++ +
Sbjct: 203 NGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 262
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN L+ LCK + A +L EM + KP TY LI C G A
Sbjct: 263 PDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEH 322
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M++ + D LI+G C E AE +L DT +Y + N F +
Sbjct: 323 RKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCK 382
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLT 592
GD+ +L K R G P+ +T
Sbjct: 383 KGDVWTGSKLLKEMQRDGHVPSVVT 407
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 202/417 (48%), Gaps = 11/417 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + S A K L ++V K + VF ++ T+ +
Sbjct: 2 RHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYV 60
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G R++ + +R T + +C +L L+KL W YEE+
Sbjct: 61 FSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 120
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L+
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 180
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 181 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 240
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
CK G++ + + M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 241 DGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 300
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ Q+ Y L+ LC+ DA +
Sbjct: 301 PDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 360
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ ++KP TY +I FC G + L+ EM G P VL+NG
Sbjct: 361 LREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 152/354 (42%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G DA YR+ R VL L+
Sbjct: 57 DIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 116
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 117 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 176
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 177 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 236
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +R+ +P L YN L+ LCK + A L DEM
Sbjct: 237 TTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 296
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 297 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 356
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L DT +Y + N F + GD+ K +L K R G AP+ +T
Sbjct: 357 AEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 410
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 198/412 (48%), Gaps = 11/412 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN---------- 177
+YC ++H L + S A K L E+V K + VF ++ +
Sbjct: 2 SYCTMIHFLCTHQXLSEA-KSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLI 60
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY++ G +R++ + +R T + +C +L L+KL W YEE+ G
Sbjct: 61 TAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYP 120
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L++ F L
Sbjct: 121 ASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M V PD+ TY+ L+NGLCKE K+ A+ LF M+ +GL P+ V++ TLI +CK
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+ +
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C++ A +R+ Q+ Y L+ LC+ DA + EM+
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+KP TY ++ FC G + L+ EM G P VL+NG
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 153/354 (43%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 52 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 111
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 112 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 171
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 172 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF 231
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ +P L YN L+ LCK + A L DEM
Sbjct: 232 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 291
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 292 KGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 351
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L DT +Y + N F + GD+ K +L K R G AP+ +T
Sbjct: 352 AEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 405
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 181/354 (51%), Gaps = 7/354 (1%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI+ AY++ G +R++ + FR + + F +C +L+ L+KL
Sbjct: 68 VFSGLIT-------AYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLV 120
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W Y+E+ G + + FNIL H FCK G++ + I + G P +V++NTL++
Sbjct: 121 WGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNG 180
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
Y K G L++ F L M+ PD+ TY+ L+NGLCKE K+ EAH+LF M+ +GL P+
Sbjct: 181 YIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPN 240
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V++ TLI +CK GK+ + + +++ G+ PD T ++ G+ K+G L +L+
Sbjct: 241 GVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLID 300
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+ G+ + Y LI C++ A +++ ++ +Y L+ LCK
Sbjct: 301 EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEG 360
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
DA + EM+ +KP TY ++ FC G L+ EM G +P
Sbjct: 361 RSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVP 414
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 149/271 (54%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR + F G +PS+VS N L+NG +K+ +D+ +++ M G P+
Sbjct: 146 FCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D+ + +++ E+G P+ VT+ TLI +CK G+L+ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ + + PDL+TY TL+ G CK+G +++ L M +GL PD ++Y TLI CKEG
Sbjct: 266 QILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + +M+ I D ++ G KEGR + A ++ E+ G+ Y
Sbjct: 326 DLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
++ C++ + LL+ + +DG+VPS+
Sbjct: 386 IVMNEFCKNGDVNTGSKLLKEMQRDGHVPSV 416
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 148/354 (41%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA +R+ T +++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CKEG+++ ++ + + G+ P + ++ GY K
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKM 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + G Y LI LC++++ A L + + + G VP+ +
Sbjct: 185 GILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTF 244
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK + A+ + +++ + + P L TY LI FC G + L+DEM
Sbjct: 245 TTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSM 304
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKA-------------------EALLGFFAKKFQIYD 554
G+ PD LI+G C E D+ A AL+ K+ + D
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVD 364
Query: 555 TE----------------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E +Y V N F ++GD++ +L K R G P+ +T
Sbjct: 365 AEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 217/469 (46%), Gaps = 10/469 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A FF WV+ P+ +V +L +F+ A ++L E+ + S + Q
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEK-------SRYILQP 54
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
I + Y GL+ +S + ++ + + N L++ +K + VY
Sbjct: 55 RIFI--ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVY 112
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
MG+ G+ P+T+TFN+L + F K VD V E+++ + P+++TY+ LI + CK
Sbjct: 113 RVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKC 172
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + A ++ M R P++ TYT++++GL K G V +A LF M GL V Y
Sbjct: 173 GGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVY 232
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N+LI + G+ + L EM+ G+ PD T +V G G GR A + E +
Sbjct: 233 NSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARD 292
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G ++ ++Y+ LI LC+ R A + + +DG VP + +N LM+ LCK + D
Sbjct: 293 VGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHD 352
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A +L +M P ++ Y LI GR EA L+ EM G PD LI+
Sbjct: 353 AFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
C + A L + K +T +YN + N G + + +L
Sbjct: 413 ESCKGGRIEDALRLFEEISAK-GFANTVTYNTILNGLCMAGRVDEAYKL 460
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 161/358 (44%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + G ++K L+++E YN+LI ++ K G A +YR+M +
Sbjct: 60 LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD T+ LMN K +V +LF M ++ SP++++Y+ LI A CK G ++++
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ +M G P+ FT ++ G GK G + A L E+ G+ +R +Y+ LI L
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ R AA L + G P + L+ L ++A + E D +
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+ Y LI C R EA + E+ E G++PD L++G C ++ A LLG
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ D YN + + + G + + +L LG+ P+ +T +I KG
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 14/270 (5%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y ++H L + + A K+ E+ L K F L+ + G E
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREM--LSKGLQPDHVTFTSLV-------YGLGVAGRASE 282
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + F++ DVG + N L++ L K +D+ W+++ E+ G+ P+ +TFN L
Sbjct: 283 ARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMD 342
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK+G + L ++ G PD+ YNTLI K GR+ +A L M P
Sbjct: 343 GLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEP 402
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+VTY TL++ CK G++ +A +LF + +G + + V+YNT++ C G++ E+ L
Sbjct: 403 DVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLF 461
Query: 369 ----YEMMGNGIYPDTFTCQIIVQGYGKEG 394
E + I PD T ++ G + G
Sbjct: 462 NGMKQETVDGVIDPDFVTYTTLLNGARQAG 491
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 127/250 (50%), Gaps = 14/250 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P + +V+ L + S A ++ E ++ C V+++ LI
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV--GCALDVNLYNVLID-------TLC 310
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + E+++ F + + G P + + N L++GL K I + + +M R G P+
Sbjct: 311 KSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L K+G V++ L +++ G++PD+VTYNTLI CK GR+ DA L+ +
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI 430
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM----VHRGLSPDIVSYNTLIFAYCK 357
+ + VTY T++NGLC G+V EA++LF+ M V + PD V+Y TL+ +
Sbjct: 431 SAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQ 489
Query: 358 EGKMQESKSL 367
G + + SL
Sbjct: 490 AGLSELANSL 499
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 234/515 (45%), Gaps = 34/515 (6%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F NWV K +LEI + HIL + +A L ++ + D + +VF
Sbjct: 39 ALKFLNWVIKKPNLEINHLTHIISTTTHILVKARMYGYAKTTLSHMLHM--DVGFN-NVF 95
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L+ CN ++ ++ ++ + FR GF PS+ +CN +L L+
Sbjct: 96 GALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLV 155
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K +D W ++EM + PN TFNIL + C+ G L K++E G P V
Sbjct: 156 KDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAV 215
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNTL++ YCKKGR A L M + + D+ TY L++ LC++ + + + + RM
Sbjct: 216 TYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRM 275
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ P+ ++YNTLI KEGK+ + + EM + P++ T ++ G+ G +
Sbjct: 276 RKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNI 335
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL L + G+ + Y L+ + + + +S+LER+ DG Y +
Sbjct: 336 EEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTM 395
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF-------------------CG 497
++ LCK + +A+ L D+M+ ++ P + T+ L+ F C
Sbjct: 396 IDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCK 455
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+G EA++ M +SG + D VL+ +C + +AE + ++ + +
Sbjct: 456 MGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVT 515
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
++ + + + GD K + + LG P+ T
Sbjct: 516 FDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFT 550
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 205/485 (42%), Gaps = 90/485 (18%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK---- 258
P+ ++ N L+NGL+K I +V+EEM + PN+ T+N L C NG++++
Sbjct: 282 PNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRL 341
Query: 259 -------------------------------VNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
V+ LE++ +G ++Y T+I CK
Sbjct: 342 CDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCK 401
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL-------------------CKEGKVRE 328
G L +A L M + +V PD+VT++ L+NG CK G ++E
Sbjct: 402 NGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKE 461
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + M G D + + L+ ++C+ G+++E++ + M G+ P + T I+
Sbjct: 462 ALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIID 521
Query: 389 GYGKEGRLLSALNLVVELQRFG-----------------------------------VSI 413
YG G L A ++ ++ G +I
Sbjct: 522 TYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAI 581
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
Y+ ++ + A +LL+ + + +VP Y L+ LC+ + ALLL
Sbjct: 582 GSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLS 641
Query: 474 DEMVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+++ + P+ + Y +L+ G S A+ + ++ML G+ PD+ VL++ Y
Sbjct: 642 GRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSR 701
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ ++K +L + ++ +YN + + +++ +++ +L + GFAP+ LT
Sbjct: 702 KGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLT 761
Query: 593 CKYMI 597
+I
Sbjct: 762 WHSLI 766
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 160/354 (45%)
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ PN + L K G E + EG PD + +N L+ Y +KG+++
Sbjct: 650 LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVN 709
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M R++ +L TY L++G K + +L++ M+ G +PD +++++LI Y
Sbjct: 710 DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK G + + L ++ G D FT ++V + + A +LV +L GV+ +
Sbjct: 770 CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV 829
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
D Y+ L + A +L + ++GY P+ + + L+ +C+ +V A+ L+DE
Sbjct: 830 DTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDE 889
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + A+I ++ EA ++ MLE ++P L++ YC E +
Sbjct: 890 MKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGN 949
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
V KA L + D +YN + + DGD+ +L + + PN
Sbjct: 950 VAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPN 1003
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 175/364 (48%), Gaps = 1/364 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K G + + F L+ G QP ++ N LL+ + + + + M +C N
Sbjct: 665 LKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNL 724
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+NIL H + K + + + ++ GF PD +T+++LI YCK G L+ A R
Sbjct: 725 ATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRK 784
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ D T L++ LC+ +++ A L ++ G++P++ +YN+L + +
Sbjct: 785 ITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCS 844
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E++ +L+ ++ NG P +++G + G + A+ L E++ GVS
Sbjct: 845 FDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSA 904
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I L + + AT +L + + +P++ + LM + CK +VA AL L+ M +
Sbjct: 905 IIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCH 964
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY-CMEKDVNKA 539
+K ++ Y LI C G A L +EM + + P++ I VLI+ + C + ++
Sbjct: 965 VKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVES 1024
Query: 540 EALL 543
E LL
Sbjct: 1025 EKLL 1028
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 188/445 (42%), Gaps = 37/445 (8%)
Query: 171 SCTEDCNW-AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
S T DC Y G ++F F K +G PS + LL GLL I++
Sbjct: 513 SVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMH 572
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
I + +N + + ++G++ L+++ F PD TY +LI+ C+KG
Sbjct: 573 RPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKG 632
Query: 290 RLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV-- 346
++ A L + +L P+ YT+L++GL KEG + A +F M++ G+ PD +
Sbjct: 633 KMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAF 692
Query: 347 ---------------------------------SYNTLIFAYCKEGKMQESKSLLYEMMG 373
+YN L+ Y K M L EM+
Sbjct: 693 NVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMII 752
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+G PD T ++ GY K G L A+ + ++ G + + L+ LC+ N
Sbjct: 753 HGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKM 812
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A L++++ G P+++ YN L + S +A + +++ P+ + LI
Sbjct: 813 AFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIR 872
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C +G A+ L DEM G+ +I G + ++A +LG + I
Sbjct: 873 GMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIP 932
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQ 578
++ + + + ++G+++K +EL+
Sbjct: 933 TVATFTTLMHTYCKEGNVAKALELR 957
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 6/285 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + + K RK GF+ + N L++ L + N I + + +++ +G+ P
Sbjct: 768 GYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTP 827
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + F + D+ L + E G+ P + TLI C+ G + A L
Sbjct: 828 NVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQ 887
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V V + ++ GL + K EA ++ M+ + P + ++ TL+ YCKE
Sbjct: 888 DEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKE 947
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ L M + D +++ G +G + +A L E+++ + + IY
Sbjct: 948 GNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIY 1007
Query: 419 DYLIVA-LCQDNRPFAATSLLERIGQDGYVP-----SLEIYNELM 457
LI + LC N + LL + + +EI NEL+
Sbjct: 1008 IVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDLHGGIEILNELL 1052
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 237/499 (47%), Gaps = 14/499 (2%)
Query: 116 VKNDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+KN L K +++ YC +V L +F ++ E++EL V L S
Sbjct: 283 IKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL-----GFVPTEAALSSL 337
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
E + G + ++F + VG PS+ N L+N L K D+ +++EMG
Sbjct: 338 VEGLR----RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMG 393
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G+C N T++IL FC+ G +D FL K+ G + YN+LI+ +CK G L+
Sbjct: 394 EKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLS 453
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A + M + + P +V+YT+L++G C +GK+ EA +L+H M +G++P+ ++ TLI
Sbjct: 454 AAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLI 513
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
A + +M ++ L EM+ + P+ T ++++G+ KEG + A L+ ++ + G+
Sbjct: 514 SALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLV 573
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
Y LI +LC R A ++ + ++ + + Y+ L+ CK + DAL +
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGV 633
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EMV R + L Y LI + L+ M + + PD I +I+GY
Sbjct: 634 CREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSK 693
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
V KA + + + +Y + N + G + K L K L PN++T
Sbjct: 694 AGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVT 753
Query: 593 -CKYMIHSLWKG-MERKFQ 609
C ++ H +G ME+ Q
Sbjct: 754 YCCFLDHLAREGSMEKAVQ 772
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 249/559 (44%), Gaps = 50/559 (8%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
L H + +VLL D+ AL FFN++ ++ ++C+++H L N F A +L
Sbjct: 69 LKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPASSLL 128
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNW-----------AYVKVGLIRESFKTFRKTLD 198
L L++ +VF+ L+ C E C++ +YV+ + +S FR
Sbjct: 129 QTL--LLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQ 186
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
P + + +LNGL K+ +D ++ E+ +GI P+ + + + FC+ + K
Sbjct: 187 CELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAK 246
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++++E D ++V YN LI CK R+ +A + + ++ + VTY TL+
Sbjct: 247 AKEMIQRMESS--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVL 304
Query: 319 GLCK-----------------------------------EGKVREAHQLFHRMVHRGLSP 343
GLCK +GKV +A L +R+ G P
Sbjct: 305 GLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP 364
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+ YN LI + CK+GK E++ L EM G+ + T I++ + + G+L +A++ +
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
++ G+ I+ Y+ LI C+ AA S + + G P++ Y L+ C
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ +A L EM + I P+ T+ LI R +A L DEMLE M+P+
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
V+I G+C E + KA LL +K + DT +Y + + G + + + R
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604
Query: 584 LGFAPNNLTCKYMIHSLWK 602
F N + ++H K
Sbjct: 605 EHFKLNEMCYSALLHGYCK 623
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 210/457 (45%), Gaps = 46/457 (10%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+A++FF+ + D +KPT +Y ++ K A ++ E+ K + F
Sbjct: 454 AAVSFFDEMI-DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG--KGIAPNTYTFT 510
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LIS A + + ++F+ F + L+ P+ V+ N ++ G K + +++
Sbjct: 511 TLIS-------ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M + G+ P+T+T+ L C G V + F++ + E F + + Y+ L+ YCK
Sbjct: 564 LNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCK 623
Query: 288 KGRLNDAFYLYRIMYRRNV-----------------------------------LPDLVT 312
+GRL DA + R M +R V PD V
Sbjct: 624 EGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVI 683
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT++++G K G V++A ++ M+ G +P+IV+Y TLI CK G M +++ L EM+
Sbjct: 684 YTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEML 743
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ P+ T + +EG + A+ L ++ + G+ + Y+ L+ C+ R
Sbjct: 744 VSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVE 802
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
AT LL+ + + P Y+ ++ C+ ++ A+ D M+++ +KP Y LI
Sbjct: 803 EATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
C G G+A L D+M+ G+ P+ + L +G
Sbjct: 863 YGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 196/464 (42%), Gaps = 73/464 (15%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+F+ + + G P+ + L++ L + N + +++++EM + P
Sbjct: 480 GYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMP 539
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N++ CK G+ K L ++ ++G PD TY LISS C GR+ +A
Sbjct: 540 NEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++R + + + Y+ L++G CKEG++R+A + MV RG+ D+V Y LI KE
Sbjct: 600 DDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE 659
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
LL M + PD ++ GY K G + A + + G + + Y
Sbjct: 660 QDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTY 719
Query: 419 DYLIVALCQ-----------------DNRPFAAT--SLLERIGQDGYV-PSLEIYNELME 458
LI LC+ ++ P T L+ + ++G + +++++N++++
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK 779
Query: 459 SL--------------CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
L CK V +A L DEM+D I P TY +I C G A
Sbjct: 780 GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGA 839
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ D ML G+ PD+ LI G C+
Sbjct: 840 IEFWDTMLNKGLKPDTLAYNFLIYGCCIA------------------------------- 868
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
G+L K EL+ +R G PN T K + H G RKF
Sbjct: 869 ----GELGKAFELRDDMIRRGVKPNQATHKSLSH----GASRKF 904
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 204/417 (48%), Gaps = 11/417 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + S A K L ++V K + VF ++ T+ +
Sbjct: 12 RHTLHSYCTMIHFLCTHQMLSEA-KXLIQVVVSRKGKGSASAVFAAILETKGTQRSDIFV 70
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ +R++ + +R T + F +C +L L+KL W Y+ +
Sbjct: 71 FSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXIL 130
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L+
Sbjct: 131 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 190
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 191 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 250
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 251 DGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLK 310
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ Q+ Y L+ LC+ DA +
Sbjct: 311 PDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKM 370
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
EM+ +KP+ TY +I FC G + L+ EM G +P VL+NG
Sbjct: 371 LREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 158/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + L DA YR+
Sbjct: 41 VVSRKGKGSASAVFAAILETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFW 100
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CK+G +R A +
Sbjct: 101 VPFDTCRKVLEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSV 160
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VSYNTL+ Y + G + E L M+ +G+ PD +T +++ G K
Sbjct: 161 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 220
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + +R+ +P L
Sbjct: 221 ESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLIT 280
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM + +KP TY LI C G A M+
Sbjct: 281 YNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMI 340
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L + +Y + N F + GD+
Sbjct: 341 QENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVW 400
Query: 573 KLMELQKRFLRLGFAPNNLT 592
K +L K R G P+ +T
Sbjct: 401 KGSKLLKEMQRDGHVPSVVT 420
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 187/390 (47%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ L+NGL+K + Q + +E G + HT+ + KN + + +EKI
Sbjct: 3 SILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITA 62
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P + TYN L++ CK GRL +A L R + PD+VTYT+L++GL K+ + E
Sbjct: 63 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE 122
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A++LF M RGL+ D V Y LI + GK+ ++ S+ M G PD T ++
Sbjct: 123 AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G K GR+ +A+ + ++ G++ + +Y LI LC+ + A +L ++ + P
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 242
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
YN L++ LCK VA A DEM++ KP + TY LI FC G + A +
Sbjct: 243 DTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVF 302
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D+M S P+ LI+G C + + KA ++ D+ Y+++ + +
Sbjct: 303 DDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKS 362
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
G L L R G A + + + H
Sbjct: 363 GKLEGGCMLFDEMERSGVANSQTRTRLIFH 392
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 208/440 (47%), Gaps = 17/440 (3%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
Q+ S++ T N D+ Y IV LA N K A+ ++ ++ C +
Sbjct: 17 QAHSLAQETTTNGCTIDIH------TYTTIVDWLAKNKKIQEAVALMEKIT--ANGCTPT 68
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+ + L++ K+G + E+ RK +D G P +V+ L++GL K
Sbjct: 69 IATYNALLN-------GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ +++++EM G+ +T + L + G + + + + + +G PD+VT +T+I
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
CK GR+ A +++ M R + P+ V Y+ L++GLCK K+ A ++ +M +
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD ++YN LI CK G + +++ EM+ G PD +T I++ G+ K G +A +
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
++ S + Y LI LC+ + A+ + + + G P +Y+ L++ LCK
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +L DEM + S + R LI C R EAVSL + + + GM P
Sbjct: 362 SGKLEGGCMLFDEMERSGVANSQTRTR-LIFHLCKANRVDEAVSLFNAIRKEGM-PHPYA 419
Query: 523 CRVLINGYCMEKDVNKAEAL 542
+I+ VN+ +A+
Sbjct: 420 YNSIISALIKSGKVNEGQAV 439
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 169/351 (48%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK G++ ++ ++T G I + +++ L K I + + E++ G P
Sbjct: 10 VKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTI 69
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L + CK G +++ L KI + G PD+VTY +LI KK R +A+ L++
Sbjct: 70 ATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKE 129
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + D V YT L+ GL + GK+ +A ++ M +G PD+V+ +T+I CK G+
Sbjct: 130 MASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 189
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + + M G+ P+ ++ G K ++ AL ++ ++++ + Y+
Sbjct: 190 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 249
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ AA + + + + G P + YN L+ CK + A + D+M
Sbjct: 250 LIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSR 309
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P++ TY LI C + +A M E G PDS + L++G C
Sbjct: 310 CSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T++ LI+ K G L A L + D+ TYTT+++ L K K++EA L ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G +P I +YN L+ CK G+++E+ LL +++ NG PD T ++ G GK+ R
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L E+ G+++ Y LI L Q + A+S+ + + G VP + + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + A+ + M R + P+ Y ALI C + A+ ++ +M ++
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD+ +LI+G C DV A A + D +YN + + F + G+
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +PN +T +I L K
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCK 326
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P ++ N L++GL K + ++EM G P+ +T+NIL FCK G+ D G
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGV 301
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ + P++VTY TLIS CK+ +L A Y+ M R PD Y++L++GLCK
Sbjct: 302 FDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCK 361
Query: 323 EGKVREAHQLFHRMVHRGLS---------------------------------PDIVSYN 349
GK+ LF M G++ P +YN
Sbjct: 362 SGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYN 421
Query: 350 TLIFAYCKEGKMQESKSLLYEM 371
++I A K GK+ E +++ EM
Sbjct: 422 SIISALIKSGKVNEGQAVYQEM 443
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 207/420 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + +++ ++P++V+ N L+NGL + + + + M + G N T+
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + CK+G+ K+EE +V Y+ +I S CK G L+DA L+ M
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM 272
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + D+V Y++++ GLC +G+ + ++ M+ R + P++V+++ LI + KEGK+ E
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K L EM+ GI PDT T ++ G+ KE RL A ++ + G + Y LI
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ C+ R L I G V YN L++ C+ + A L EMV R + P
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
S+ TY L+ C G +A+ + ++M +S M+ I ++I+G C V+ A +L
Sbjct: 453 SVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLF 512
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ K D +YN + + G LS+ L ++ G AP++ T +I + G
Sbjct: 513 CSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGG 572
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 201/416 (48%), Gaps = 2/416 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ F + PS++ + L + + + D +EM GI N +T NI
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + FC+ + + + + GF+P+ +T++TLI+ +C +GR+++A L M
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P++VT TL+NGLC +G+V EA L RMV G + ++Y ++ CK G +
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L +M I I++ K+G L AL+L E++ G+ Y +I L
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289
Query: 426 CQDNR-PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C D R A L E IG++ +P++ ++ L++ K + +A L +EMV R I P
Sbjct: 290 CNDGRWDDGAKMLREMIGRN-IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPD 348
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY +LI FC R GEA ++D M+ G P+ +LIN YC K V+ L
Sbjct: 349 TITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFC 408
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ K + DT +YN + F + G L+ EL + + G P+ +T ++ L
Sbjct: 409 EISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGL 464
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 195/414 (47%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F + L GF+P+ ++ + L+NG + + + + M + PN T N L +
Sbjct: 123 AFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN 182
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G V + ++++ + G + + +TY +++ CK G A L+R M R++
Sbjct: 183 GLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKA 242
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+V Y+ +++ LCK+G + +A LF+ M +G+ D+V+Y+++I C +G+ + +L
Sbjct: 243 SVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKML 302
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+G I P+ T ++ + KEG+LL A L E+ G++ Y LI C++
Sbjct: 303 REMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKE 362
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
NR A +L+ + G P++ Y+ L+ S CK V + + L E+ + + TY
Sbjct: 363 NRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTY 422
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ FC G+ A L EM+ G+ P +L++G C ++ KA + K
Sbjct: 423 NTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQK 482
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
I YN + + + L G P+ LT MI L K
Sbjct: 483 SRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCK 536
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 1/381 (0%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
FRK + + S+V + +++ L K +D ++ EM GI + ++ + C
Sbjct: 232 FRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN 291
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G D L ++ P++VT++ LI + K+G+L +A LY M R + PD +T
Sbjct: 292 DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTIT 351
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y++L++G CKE ++ EA+Q+ MV +G P+IV+Y+ LI +YCK ++ L E+
Sbjct: 352 YSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ DT T +VQG+ + G+L A L E+ GV S Y L+ LC +
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + E++ + + + IYN ++ +C V DA L + + +KP + TY +I
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G EA L +M E G P +LI + V + L+ +
Sbjct: 532 GGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFA 591
Query: 553 YDTESYNAVFNMFAEDGDLSK 573
D + V M + DG L K
Sbjct: 592 ADASTIKMVVVMLS-DGRLDK 611
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 173/346 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F + G + +V+ + ++ GL D ++ EM I PN
Sbjct: 256 KDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVV 315
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF+ L VF K G + + ++ G PD +TY++LI +CK+ RL +A + +M
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P++VTY+ L+N CK +V +LF + +GL D V+YNTL+ +C+ GK+
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+K L EM+ G+ P T I++ G G L AL + ++Q+ + + IY+ +
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I +C ++ A SL + G P + YN ++ LCK S+++A +L +M +
Sbjct: 496 IHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
PS TY LI G +V L++EM G D+ ++++
Sbjct: 556 APSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 171/343 (49%), Gaps = 16/343 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
AL+ FN ++E+K ++ Y I+ L + ++ KML E++ ++ +V
Sbjct: 263 ALSLFN----EMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG--RNIIPNVVT 316
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI +VK G + E+ + + + + G P ++ + L++G K N + +
Sbjct: 317 FSALID-------VFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN 369
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
Q+ + M G PN T++IL + +CK VD +I +G D VTYNTL+ +
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C+ G+LN A L++ M R V P +VTY L++GLC G++++A ++F +M + I
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGI 489
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
YN +I C K+ ++ SL + G+ PD T +++ G K+G L A L +
Sbjct: 490 GIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
++ G + S Y+ LI A + ++ L+E + G+
Sbjct: 550 MKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAA 592
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 252 KNGDVD-KVN---GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+NG VD KVN E + + P L+ ++ L S+ ++ + + M +
Sbjct: 42 RNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIE 101
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
++ T ++N C++ K+ A + R + G P+ ++++TLI +C EG++ E+ +L
Sbjct: 102 HNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVAL 161
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ M+ P+ T ++ G +GR+ AL L+ + ++G + Y ++ +C+
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCK 221
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A L ++ + S+ Y+ +++SLCK ++ DAL L +EM + IK +
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y ++I C GR + ++ EM+ ++P+ LI+ + E + +A+ L
Sbjct: 282 YSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ DT +Y+++ + F ++ L + ++ + G PN +T +I+S K
Sbjct: 342 ARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 9/266 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ N+ A +ML +V K C ++ + LI+ +Y
Sbjct: 345 IAPDTITYSSLIDGFCKENRLGEANQMLDLMVS--KGCEPNIVTYSILIN-------SYC 395
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + + F + G V+ N L+ G + ++ ++++EM G+ P+
Sbjct: 396 KAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C NG++ K EK+++ + YN +I C +++DA+ L+ +
Sbjct: 456 TYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSL 515
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD++TY ++ GLCK+G + EA LF +M G +P +YN LI A+ +
Sbjct: 516 SVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGV 575
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIV 387
S L+ EM G D T +++V
Sbjct: 576 ISSVELIEEMKMRGFAADASTIKMVV 601
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 138/322 (42%), Gaps = 36/322 (11%)
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L NG+ + KV EA LF M+ P ++ ++ L A + + EM NG
Sbjct: 41 LRNGIV-DIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNG 99
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
I + +T I++ + ++ +LL A ++V +FG + + LI C + R A
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV------------------ 477
+L++R+ + Y P++ N L+ LC V +AL+L D MV
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219
Query: 478 -----------------DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+R+IK S+ Y +I C G +A+SL +EM G+ D
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+I G C + + +L + I + +++A+ ++F ++G L + EL
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
+ G AP+ +T +I K
Sbjct: 340 MVARGIAPDTITYSSLIDGFCK 361
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 212/427 (49%), Gaps = 7/427 (1%)
Query: 182 KVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + + FR + G P+IV+ N ++NGL K N + +++EE+ + G P+
Sbjct: 57 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDV 116
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L CK GD+++ + G P++VTY+ LI+ CK GR+++A L +
Sbjct: 117 VTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQE 176
Query: 301 MYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAYC 356
M R+ +VLP+++TY + ++GLCK+ EA +L + L SPD V+++TLI C
Sbjct: 177 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 236
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+ + +M+ G P+ T +V G K ++ A ++ + GV+
Sbjct: 237 KCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 294
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+ A C+ +R A LL + G P++ +N +++ LCK D +A + ++
Sbjct: 295 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQV 354
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+R + P T+ LI C G +A +L +EM+ M PD LI+G C V
Sbjct: 355 YNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQV 414
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A +L + +YN + + + G + + E + + G P ++T +
Sbjct: 415 EAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSL 474
Query: 597 IHSLWKG 603
+++L +
Sbjct: 475 VYALCRA 481
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 178/333 (53%), Gaps = 8/333 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G+ P++V+ N L+NGL K + +++ + E M G+ P+ T+++L FCK VD+
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 312
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + G P++VT+N++I CK R +AF + +Y R ++PD VT+ L+ G
Sbjct: 313 LELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAG 372
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYP 378
CK G +A LF MV + + PD++++ LI CK G+++ ++ +L ++MGN G+ P
Sbjct: 373 ACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNLGVPP 431
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++V G K GR+ + E+ G Y L+ ALC+ +R A L+
Sbjct: 432 NVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLV 491
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ G+ P YN L++ L K A+ + +EMV + +P T+ A CF G+
Sbjct: 492 SKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA---CFGGL 548
Query: 499 GRSGEAVSLMDEM---LESGMLPDSQICRVLIN 528
RSG M+ + L GMLPD+ C +++
Sbjct: 549 HRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 236/535 (44%), Gaps = 54/535 (10%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
++ AL F + PT Y I++ L +N+ M++ ELV+ H
Sbjct: 59 GETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKR----GHHP 114
Query: 164 DV--FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
DV + LI + K G + E+ + G P++V+ + L+NGL K+ I
Sbjct: 115 DVVTYNTLID-------SLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 222 DQCWQVYEEMGRI----------------GIC-----------------------PNTHT 242
D+ ++ +EM R G+C P+T T
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F+ L CK G D+ + + G+ P++VTYN L++ CK ++ A + M
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ V PD++TY+ L++ CK +V EA +L H M RG +P++V++N++I CK +
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ + ++ + PD T I++ G K G A L E+ + + LI
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ + AA +L+ +G G P++ YN L+ LCK + + +EMV
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY +L+ C R+ +A+ L+ ++ G PD+ +L++G +A +
Sbjct: 466 PESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITV 525
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
L K D+ ++ A F G+L+ MEL + L G P+ TC ++
Sbjct: 526 LEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 199/404 (49%), Gaps = 7/404 (1%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYE-EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
S+ N +L L + + +++ EM R G+ P T+N + + CK+ ++
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMEL 103
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
E++ + G PD+VTYNTLI S CK G L +A L+ M R +P++VTY+ L+NGLCK
Sbjct: 104 FEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCK 163
Query: 323 EGKVREAHQLFHRMVHRG--LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYP 378
G++ EA +L M + + P+I++YN+ + CK+ E+ L+ + + P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
DT T ++ G K G+ A N ++ G + Y+ L+ LC+ ++ A +++
Sbjct: 224 DTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + G P + Y+ L+++ CK V +AL L M R P++ T+ ++I C
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
RSGEA + ++ ++PD +LI G C + +A AL K D ++
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A+ + + G + ++ LG PN +T ++H L K
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCK 445
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 16/269 (5%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS---DSVSA 109
P N I+D +C S + G++ LQ + L+P I + C++ + SA
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNI-LIAGACKAGNFEQASA 384
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
L KN ++P + ++ L + A +L + L P +V + L
Sbjct: 385 LFEEMVAKN---MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL--GVPPNVVTYNVL 439
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+ K G I E + + + G P ++ L+ L + + D Q+
Sbjct: 440 V-------HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVS 492
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
++ G P+T T+NIL K+G ++ LE++ +G PD T+ + G
Sbjct: 493 KLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSG 552
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L L R++ + +LPD T +++++
Sbjct: 553 NLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 208/432 (48%), Gaps = 13/432 (3%)
Query: 110 LTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+FF W+ + + + T +YC ++H L + FS A K L ++V K + VF
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEA-KSLIQVVVSRKGKGSASAVFA 59
Query: 168 DLISC--TEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ T+ + AY++ G +R++ + +R T + +C +L L+K
Sbjct: 60 AILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMK 119
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L W YEE+ G + + FNIL H FCK+GD+ + I + G P + +
Sbjct: 120 LRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXS 179
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YNTL++ Y + G L++ F L M V PD+ TY+ L+NGL KE + + ++LF M+
Sbjct: 180 YNTLMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEML 239
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ V++ TLI +CK G++ + + +M+ + PD T + G K+G L
Sbjct: 240 XKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLN 299
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A L+ E+ G+ + Y LI C++ AA +R+ Q+ Y L+
Sbjct: 300 QAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALI 359
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ DA + EM+ +KP TY +I FC G + + EM +G +
Sbjct: 360 SGLCQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHV 419
Query: 518 PDSQICRVLING 529
P VL+NG
Sbjct: 420 PXVVTYNVLMNG 431
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 142/354 (40%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 71 DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFY 130
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P + SYNTL+ Y +
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRL 190
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M +G+ PD +T +++ G KE + L E+ G+ + +
Sbjct: 191 GXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTF 250
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ P YN L LCK + A L DEM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSM 310
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 311 KGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXD 370
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L D +Y + N F + GD+ K + K R G P +T
Sbjct: 371 AEKMLREMLSVGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVT 424
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 209/426 (49%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I F K L G+ P V+ N L+ GL + + ++++ G N
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK GD FL KI+ PD+V YNT+I + CK +++A+ L+
Sbjct: 164 QVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFS 223
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + D+VTY TL+ G C GK++EA L + MV + ++P++ +YN L+ A CKEG
Sbjct: 224 EMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+KS+L M+ + PD T ++ GY + A ++ + GV+ Y
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C++ A +L + + Q VP + Y+ L++ LCK ++ L DEM DR
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +LI C G A++L ++M + + P+ +L++G C + A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + K + +YN + N + G L + + + + G PN T + +I +
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Query: 600 LWKGME 605
L+K E
Sbjct: 524 LFKKDE 529
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 187/362 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K RK +P +V N +++ + K + + + ++ EM GI +
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FC G + + G L ++ + +P++ TYN L+ + CK+G++ +A + +M
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD++TY+TLM+G +V++A +F+ M G++PD+ +Y LI +CK +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM + P T ++ G K GR+ +L+ E++ G Y L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ A +L ++ P++ + L++ LCK + DA + +++ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
++ TY +I C G EA++++ +M ++G +P++ +I + + +KAE
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEK 535
Query: 542 LL 543
LL
Sbjct: 536 LL 537
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 159/339 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K L+ E++ F + G +V+ N L+ G + + + + EM I P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+NIL CK G V + L + + PD++TY+TL+ Y + A +++
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V PD+ TYT L+NG CK V EA LF M + + P IV+Y++LI CK
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ L+ EM G D T ++ G K G L A+ L +++ + + +
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+ R A + + + GY ++ YN ++ CK + +AL + +M D
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ T+ +I + +A L+ +M+ G+L
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 178/378 (47%), Gaps = 10/378 (2%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+ +A+ F + L KP Y I+ + S A + E+ VK V
Sbjct: 178 GDTRAAIKFLRKIDGRLT-KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMA--VKGISADV 234
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ LI + + VG ++E+ + + P++ + N L++ L K + +
Sbjct: 235 VTYNTLI-------YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
V M + + P+ T++ L + +V K + G PD+ TY LI+
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+CK +++A L++ M+++N++P +VTY++L++GLCK G++ L M RG
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPA 407
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D+++Y++LI CK G + + +L +M I P+ FT I++ G K GRL A +
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+L G ++ Y+ +I C+ A ++L ++ +G +P+ + ++ +L K
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Query: 464 DSVADALLLKDEMVDRNI 481
D A L +M+ R +
Sbjct: 528 DENDKAEKLLRQMIARGL 545
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 57/138 (41%)
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+V DA+ + M+ P + + ++ F + AVSL + G+ PD
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+LIN +C + ++L K+ DT + N + G + K + + L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 585 GFAPNNLTCKYMIHSLWK 602
GF N ++ +I+ + K
Sbjct: 159 GFQLNQVSYATLINGVCK 176
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 193/361 (53%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + R+ QP++V + +++G+ K ++ + +Y EM GI PN
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F G + K+ E PD+ T+N L+ +CK G++ + ++ +M
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + P++VTY +LM+G C +V +A + + M RG++PDI SYN LI +CK K+
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM I PD T ++ G K G++ AL LV E+ GV Y +
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC++++ A +LL ++ G P++ Y L++ LCK + DA + ++++ +
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+++TY +I FC G EA++L+ +M ++ +PD+ ++I + + +KAE
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK 533
Query: 542 L 542
L
Sbjct: 534 L 534
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 204/404 (50%), Gaps = 2/404 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G+ P+ ++ L+ GL I Q ++ + +G + + L H CK G+
Sbjct: 121 MGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRA 180
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L +++ P++V Y+T+I CK +NDAF LY M + + P++VTY+ L++
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G G++++A LF++M+ + PD+ ++N L+ +CK+GKM+E K++ MM GI P
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ GY + A +++ + + GV+ Y+ LI C+ + A +L
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + +P + YN L++ LCK ++ AL L DEM DR + P + TY +++ C
Sbjct: 361 KEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTES 557
+ +A++L+ ++ + G+ P+ +LI+G C + A + K + I +
Sbjct: 421 HQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNI-TVNT 479
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
Y + + F G + + L + P+ +T + +I SL+
Sbjct: 480 YTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 205/402 (50%), Gaps = 3/402 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ + +GFQ V L++GL K+ + + + PN +
Sbjct: 141 GQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMY 200
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + CK+ V+ ++ +G P++VTY+ LIS + G+L DA L+ M
Sbjct: 201 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMIL 260
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
N+ PD+ T+ L++G CK+GK++E +F M+ +G+ P++V+Y +L+ YC ++ +
Sbjct: 261 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 320
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+KS+LY M G+ PD + I++ G+ K ++ A+NL E+ + Y+ LI
Sbjct: 321 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ + A L++ + G P + Y+ ++++LCK V A+ L ++ D+ I+P
Sbjct: 381 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY LI C GR +A ++ +++L G V+I+G+C + ++A ALL
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500
Query: 544 GFFAKKFQIYDTESYNAVF-NMFAEDGD--LSKLMELQKRFL 582
I D +Y + ++F +D + KL E+ R L
Sbjct: 501 SKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRGL 542
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 232/475 (48%), Gaps = 22/475 (4%)
Query: 17 SKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQ----NPNKIV--DLICSSLK 70
+K+ S S L + Q E + ++ L++F Q +PN I LI
Sbjct: 80 NKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCL 139
Query: 71 KGDSHLTLLQND----LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTS 126
KG H LL +D + L +G + L + ++ +AL V +L ++P
Sbjct: 140 KGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKV-GETRAALDLLRRVDGNL-VQPNV 197
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
Y I+ + + + A + E+V K +V + LIS + VG +
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEMVS--KGISPNVVTYSALIS-------GFFTVGQL 248
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+++ F K + +P + + N L++G K + + V+ M + GI PN T+ L
Sbjct: 249 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+C +V+K L + + G +PD+ +YN LI +CK ++++A L++ M+ +++
Sbjct: 309 MDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+PD+VTY +L++GLCK GK+ A +L M RG+ PDI++Y++++ A CK ++ ++ +
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL ++ GI P+ +T I++ G K GRL A N+ +L G +I+ + Y +I C
Sbjct: 429 LLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFC 488
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
A +LL ++ + +P Y ++ SL D A L+ EM+ R +
Sbjct: 489 NKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLR-EMITRGL 542
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 186/420 (44%), Gaps = 54/420 (12%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++F F + L P + N +L L+K + ++M GI P +
Sbjct: 57 VVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINP------V 110
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L H F + G+ P+ +T+ TLI C KG+++ A + +
Sbjct: 111 LFH-------------FQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
D V Y TL++GLCK G+ R A L R+ + P++V Y+T+I CK+ + ++
Sbjct: 158 FQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAF 217
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM+ GI P+ T ++ G+ G+L A++L ++
Sbjct: 218 DLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKM------------------- 258
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+LE I D Y +N L++ CK + + + M+ + IKP++
Sbjct: 259 -----------ILENIKPDVYT-----FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV 302
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +L+ +C + +A S++ M + G+ PD Q +LI+G+C K V++A L
Sbjct: 303 VTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKE 362
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
K I D +YN++ + + G +S ++L G P+ +T ++ +L K +
Sbjct: 363 MHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 422
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 158/345 (45%), Gaps = 16/345 (4%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+ + Y+++ +++ + DAF L+ + R+N P + + ++ L K L
Sbjct: 40 NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99
Query: 334 HRMVHRGLSP----------------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+M G++P + +++ TLI C +G++ ++ ++ G
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
D ++ G K G +AL+L+ + V + +Y +I +C+D A L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G P++ Y+ L+ + DA+ L ++M+ NIKP + T+ L+ FC
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G+ E ++ M++ G+ P+ L++GYC+ K+VNKA+++L +++ D +S
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
YN + + F + + + M L K P+ +T +I L K
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCK 384
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY P+ + L++ LC + ALL D +V + Y LI C +G + A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L+ + + + P+ + +I+G C +K VN A L K + +Y+A+ +
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
F G L ++L + + P+ T ++ K + K
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 284
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 250/542 (46%), Gaps = 22/542 (4%)
Query: 60 KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKND 119
K++ L S +K + L L L PL ++ VLL Q D +AL FF W
Sbjct: 188 KLIQLSSSWNRKFEGELRYLVRSLNPL-------QVCAVLL-SQEDERNALRFFYWADRL 239
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV--ELVKDCPHSVDVFQDLISCTEDCN 177
+ SS Y +++ IL+ K K + L+ ++ CP +
Sbjct: 240 WRYRHDSSVYLVMLEILS-KTKLCQGAKRILRLMTRRRIQLCPEAFGFVM---------- 288
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+Y + G +R++ K G +P++ CN ++ L+ N + + + E M IGI
Sbjct: 289 VSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIA 348
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N L +C VD+ ++++ +G PD V+Y T++ C+ RLN+ L
Sbjct: 349 PNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIREL 408
Query: 298 YRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ M +LPD VTY +L+ L K G EA ++ D V Y+ ++ AYC
Sbjct: 409 IKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYC 468
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
KEGK+Q++K L+ EM G PD T ++ G+ + G+L A ++ ++ + +
Sbjct: 469 KEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAV 528
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y + LC++ + A ++ ++ + P+ Y+ ++ L + + +A + EM
Sbjct: 529 TYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREM 588
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + P+ L+ C G+ EA L+ E + G + +I+G+C + D+
Sbjct: 589 IGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDL 648
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A +LL + DT +Y A+ + A+ + + EL + LR G P+ +T + +
Sbjct: 649 EAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSV 708
Query: 597 IH 598
IH
Sbjct: 709 IH 710
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 214/472 (45%), Gaps = 66/472 (13%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP---------------HSVDVF 166
++P S +HIL N+ A++ E + L+ P H VD
Sbjct: 312 VEPNLSICNTAIHILVMGNELKKALR-FAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQA 370
Query: 167 QDLI------SCTEDCNWAYVKVGL---------IRESFKTFRKTLDVGFQPSIVSCNFL 211
+LI C+ D Y +GL IRE K + D P V+ N L
Sbjct: 371 MELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQT--DSKLLPDHVTYNSL 428
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+ L K D+ ++ +E ++ + ++ + H +CK G + K + ++ +G
Sbjct: 429 IQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGC 488
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
DPD+VTY +++ +C+ G+L+ A + + MY+ + P+ VTYTT +NGLC+ GK EA +
Sbjct: 489 DPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARK 548
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ + +P+ ++Y+ ++ +EGK+ E+ ++ EM+G G +P+ ++V
Sbjct: 549 MMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLC 608
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
++G+ A L+ E G +++ + +I CQ + AA SLL+ + P
Sbjct: 609 RDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTV 668
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS---------- 501
Y L+++L K D + +A L +M+ + + PS TYR++I +C GR
Sbjct: 669 TYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKM 728
Query: 502 -----------------------GEAVSLMDEMLESGMLPDSQICRVLINGY 530
EA SL+ E+L + D++ C VL+ Y
Sbjct: 729 LLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 185/378 (48%), Gaps = 2/378 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G I+++ + + G P +V+ +L+G ++ +DQ ++ ++M + P
Sbjct: 466 AYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKP 525
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ + C+NG + + EEE + P+ +TY+ ++ ++G+LN+A +
Sbjct: 526 NAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVV 585
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + P+ V L++ LC++GK REA+QL +++G + ++V++ T+I +C++
Sbjct: 586 REMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQK 645
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ + SLL +M +PDT T ++ K R+ A L +++ R G+ S Y
Sbjct: 646 DDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTY 705
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I C+ R LL+++ + YN ++E LCK + +A L E++
Sbjct: 706 RSVIHQYCRKGRVEDLLKLLKKMLLKSRFQT--AYNLVIEKLCKFGYLEEANSLLGEVLR 763
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ T L+ + +G A + M ++PD ++C + +E + +
Sbjct: 764 TASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEE 823
Query: 539 AEALLGFFAKKFQIYDTE 556
A+ L+ F ++ + E
Sbjct: 824 ADRLVLRFVERGHVSAQE 841
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 138/324 (42%), Gaps = 26/324 (8%)
Query: 102 CQSDSVSALTFFNWV---KNDLEIK------------PTSSNYCLIVHILAWNNKFSFAM 146
C+ ++V+ TF N + LE + P + Y ++VH L K + A
Sbjct: 523 CKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEAC 582
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
++ E++ P+ V++ + S D G RE+ + ++ ++ G ++V
Sbjct: 583 DVVREMIG-KGFFPNPVEINLLVHSLCRD--------GKPREANQLLKECMNKGCAVNVV 633
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ +++G + + ++ + ++M P+T T+ L K +++ K+
Sbjct: 634 NFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKM 693
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+G P VTY ++I YC+KGR+ D L + M ++ Y ++ LCK G +
Sbjct: 694 LRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQ--TAYNLVIEKLCKFGYL 751
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA+ L ++ D + + L+ +Y G + + M + PD C+ +
Sbjct: 752 EEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKV 811
Query: 387 VQGYGKEGRLLSALNLVVELQRFG 410
+ EG+L A LV+ G
Sbjct: 812 SKRLVVEGKLEEADRLVLRFVERG 835
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 220/478 (46%), Gaps = 14/478 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++H L+ N+ + A+++L E+ + C + F D+I K
Sbjct: 244 PNSVIYQTLIHSLSKCNRVNEALQLLEEM--FLMGCVPDAETFNDVI-------LGLCKF 294
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
I E+ K + L GF P ++ +L+NGL K+ +D ++ + + P + F
Sbjct: 295 DRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIF 350
Query: 244 NILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L H F +G +D L + + G PD+ TYN+LI Y KKG + A + R M
Sbjct: 351 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMR 410
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++ +YT L++G CK GK+ EA+ L + M GL P+ V +N LI A+CKE ++
Sbjct: 411 NKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIP 470
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ + EM G PD +T ++ G + + AL L+ ++ GV + Y+ LI
Sbjct: 471 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A + A L+ + G + YN L++ LC+ V A L ++M+ +
Sbjct: 531 NAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLV 590
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
PS + LI C G EAV EM+ G PD LING C + +
Sbjct: 591 PSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 650
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ DT +YN + + + G + L + GF PN+ T ++ SL
Sbjct: 651 FRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 187/370 (50%), Gaps = 8/370 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KPTS + ++H + + A +L ++V P V + LI + Y K
Sbjct: 344 KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP-DVCTYNSLI-------YGYWK 395
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
GL+ + + R + G +P++ S L++G KL ID+ + + EM G+ PNT
Sbjct: 396 KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN L FCK + + ++ +G PD+ T+N+LIS C+ + A +L R M
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V+ + VTY TL+N + G+++EA +L + MV +G D ++YN+LI C+ G++
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVD 575
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++SL +M+ +G+ P + +C I++ G + G + A+ E+ G + ++ LI
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R ++ ++ +G P YN LM LCK V DA LL DE ++
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFV 695
Query: 483 PSLSTYRALI 492
P+ T+ L+
Sbjct: 696 PNDRTWSILL 705
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 248/537 (46%), Gaps = 46/537 (8%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
LL D +++ F+W + + + Y +++ L N +F ++L ++ KD
Sbjct: 78 LLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQM----KD 133
Query: 159 CPHSVDVFQD--LISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGL 215
VF++ IS D Y K G ++ + + +V +P+ S N +L L
Sbjct: 134 ---EGIVFKESLFISIMRD----YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 186
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ NC V+ +M I P TF ++ C +VD L + + G P+
Sbjct: 187 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNS 246
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V Y TLI S K R+N+A L M+ +PD T+ ++ GLCK ++ EA ++ +R
Sbjct: 247 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 306
Query: 336 MVHRGLSPDIVSY-------------------------------NTLIFAYCKEGKMQES 364
M+ RG +PD ++Y NTLI + G++ ++
Sbjct: 307 MLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDA 366
Query: 365 KSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
K++L +M+ + GI PD T ++ GY K+G + AL ++ +++ G + Y L+
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ + A +LL + DG P+ +N L+ + CK + +A+ + EM + KP
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ +LI C + A+ L+ +M+ G++ ++ LIN + ++ +A L+
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + D +YN++ G++ K L ++ LR G P++++C +I+ L
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGL 603
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 175/339 (51%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+ G K + +V +M G PN +++ IL FCK G +D+
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ +G P+ V +N LIS++CK+ R+ +A ++R M R+ PD+ T+ +L++G
Sbjct: 438 YNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 497
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ +++ A L M+ G+ + V+YNTLI A+ + G+++E++ L+ EM+ G D
Sbjct: 498 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD 557
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G + G + A +L ++ R G+ S + LI LC+ A +
Sbjct: 558 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQK 617
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P + +N L+ LC+ + D L + ++ I P TY L+ C G
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+A L+DE +E G +P+ + +L+ ++ +++
Sbjct: 678 FVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 201/406 (49%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H+L + S A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLDSYCTMIHLLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F +C +L L+KL W YEE+
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ I + G P +V++NTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G ++G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ Q+ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKV 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMP 414
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 150/271 (55%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR + F G +PS+VS N L+NG ++L +D+ +++ M G+ P+
Sbjct: 146 FCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++ PDL+TY TL+ GLC++G +++A L M +GL PD ++Y TLI CKEG
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + M+ I D ++ G +EGR L A ++ E+ G+ Y
Sbjct: 326 DLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DG +PS+
Sbjct: 386 MIINEFCKKGDVWTGSKLLKEMQRDGQMPSV 416
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 105/190 (55%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + LD G P+ V+ L++G K +D ++Y++M + P+ T+N L + C+
Sbjct: 229 FDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCR 288
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD+ + ++++ +G PD +TY TLI CK+G L AF + M + N+ D V
Sbjct: 289 KGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVG 348
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT L++GLC+EG+ +A ++ M+ GL PD ++Y +I +CK+G + LL EM
Sbjct: 349 YTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 373 GNGIYPDTFT 382
+G P T
Sbjct: 409 RDGQMPSVVT 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL + + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + PD +TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 125 EEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 185 GDLDEGFRLKTAMHASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEHRKRMIQENIQLDDVGYTALISGL 356
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ I + G PS+ +N LM + + +
Sbjct: 133 PASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + +A L DEML+ G++P+ LI+G+C
Sbjct: 193 LKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHC 252
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + GDL + +L G P+ +
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKI 312
Query: 592 TCKYMI 597
T +I
Sbjct: 313 TYTTLI 318
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 204/416 (49%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP +V+ ++NGL K ID + ++M + I + +N +
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 262
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK +D K+E +G PD+ TYN+LIS C GR +DA L M R +
Sbjct: 263 DGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN 322
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VT++ L++ KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +P+ T +++G+ K R+ + L E+ + G+ + Y+ LI L Q
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + +++ DG P + Y+ L++ LCK + AL++ + + ++P + T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ I +I+G+C + +A+AL
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + D+ YN + DGD + EL K GF + T +I+ L G
Sbjct: 563 EDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 222/472 (47%), Gaps = 10/472 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C S +S ++ KP + + ++H L +NK S A+ ++ ++V+ + C
Sbjct: 161 CHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ--RGCQ- 217
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
DL++ N K G I + +K + +V N +++GL K I
Sbjct: 218 -----PDLVTYGAVVN-GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI 271
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D + ++ +M GI P+ T+N L C G + L + E +P++VT++ L
Sbjct: 272 DDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSAL 331
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I ++ K+G+L +A LY M +R++ PD+ TY++L+NG C ++ EA +F M+ +
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++V+YNTLI +CK +++E L EM G+ +T T ++QG + G A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ ++ GV Y L+ LC+ + A + E + + P + YN ++E +C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V D L + + +KP++ Y +I FC G EA +L EM E G LPDS
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSG 571
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
LI + D + L+ + D + + V NM DG L K
Sbjct: 572 CYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEK 622
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 195/400 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+ D + E M + I + +++NIL + FC+ +
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R++DA L M PD VT+ TL++GL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L +MV RG PD+V+Y ++ CK G + + SLL +M I D
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + A L +++ G+ Y+ LI LC R A+ LL +
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ ++ L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LI G+C K V + L +++ + +T +YN +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD ++ K+ + G P+ +T ++ L K
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 199/416 (47%), Gaps = 5/416 (1%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +G++P IV+ + LLNG I + ++M +G P+T TFN L H +
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHN 199
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+ ++++ + G PDLVTY +++ CK+G ++ A L + M + + D+V Y
Sbjct: 200 KASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 259
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T+++GLCK + +A LF++M +G+ PD+ +YN+LI C G+ ++ LL M+
Sbjct: 260 TIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIER 319
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPF 432
I P+ T ++ + KEG+L+ A L E+ + SI DI+ Y LI C +R
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLD 377
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + E + P++ YN L++ CK V + + L EM R + + TY LI
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G A + +M+ G+ PD +L++G C + KA + + K
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WKGMERK 607
D +YN + + G + +L G PN + MI KG++ +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 190/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N LL L +D ++ EM + P+ FN L K D V E+++
Sbjct: 54 NALLNLK-LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRIS 112
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
DL +YN LI+ +C++ +L A + M + PD+VT ++L+NG C ++ +A L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 172
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+MV G PD V++NTLI K E+ +L+ +M+ G PD T +V G K
Sbjct: 173 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCK 232
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + AL+L+ ++++ + IY+ +I LC+ A +L ++ G P +
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFT 292
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LC +DA L M++R I P++ T+ ALI F G+ EA L DEM+
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + PD LING+CM +++A+ + K + +YN + F + +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ MEL + + G N +T +I L++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F +P I + N ++ G+ K ++ W ++ + G+ PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + FC+ G ++ + +++E+G PD YNTLI + + G + L + M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D T + ++N L +G++ +++
Sbjct: 597 RSCGFVGDASTISMVINML-HDGRLEKSY 624
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 199/406 (49%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW-- 178
+ T YC ++H L + S A K L ++V K + VF + T+ +
Sbjct: 10 RHTLHXYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYV 68
Query: 179 ------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F +C +L L+KL W YEE+
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ +A +R+ Q+ Y L LC+ DA +
Sbjct: 309 PDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC G + L+ EM G +P
Sbjct: 369 LREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 414
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 149/271 (54%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR + F G +PS+VS N L+NG ++L +D+ +++ M G+ P+
Sbjct: 146 FCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N +++ +G P+ VT+ TLI +CK GR++ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++ PDL+TY TL+ GLCK+G +++AH L M +GL PD ++Y TLI CKEG
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + M+ I D + G +EGR + A ++ E+ G+ Y
Sbjct: 326 DLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DG+VPS+
Sbjct: 386 MIINEFCKKGDVWKGSKLLKEMQRDGHVPSV 416
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 9/226 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y ++++ L +K A ++ E+ LVK + F LI +
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEM--LVKGLVPNGVTFTTLID-------GHC 252
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 312
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L CK GD+D +++ +E D V Y L S C++GR DA + R M
Sbjct: 313 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREM 372
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ PD TYT ++N CK+G V + +L M G P +V+
Sbjct: 373 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DJ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CK+G ++ ++S+ + G+ P + ++ GY +
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 185 GDLDEGFRLKSAMLASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+ + + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDS 329
Query: 574 LMELQKRFLR 583
E +KR ++
Sbjct: 330 AFEHRKRMIQ 339
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 121/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L Y T+++ LC + EA L +V R DJ ++ L
Sbjct: 13 LHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C+D A S+ + I + G PS+ YN LM + + +
Sbjct: 133 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M+ ++P + TY LI C + +A L DEML G++P+ LI+G+C
Sbjct: 193 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 252
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + L G P+ +
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 312
Query: 592 TCKYMI 597
T +I
Sbjct: 313 TYTTLI 318
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I + GY SL +N LM CK + A + D + ++PS+ +Y L+ + +
Sbjct: 125 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 184
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L ML SG+ PD VLING C E ++ A L K + + ++
Sbjct: 185 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 244
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 204/419 (48%), Gaps = 9/419 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ ++ ++ +A NKF + + ++ L H + F LI C C+ + +
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENL--GISHDLYSFTILIHCFCRCSRFSLAL 670
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L+ K + +GFQPSIV+ LLNG + N + + + M +G+ PN +
Sbjct: 671 ALLG-------KMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIY 723
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CKN D++ +E++G D VTYNTLIS C GR DA L R M +
Sbjct: 724 NTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVK 783
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P+++ +T L++ KEG + EA L+ M+ R + P+I++YN+LI +C +G++ +
Sbjct: 784 RKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGD 843
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G +PD T ++ G+ K R+ + L E+ G+ Y+ LI
Sbjct: 844 AKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIH 903
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A + R+ G P + YN L++ LC + AL++ +++ +
Sbjct: 904 GYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV 963
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +I C + EA L + G+ D+ +I+G C +A+ L
Sbjct: 964 DIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 195/421 (46%), Gaps = 1/421 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F F + L PSIV +L + K+N D ++ +M +GI + ++F IL
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+ L K+ + GF P +VT +L++ +C+ R +A L M +
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y T++NGLCK + A ++F+ M +G+ D V+YNTLI C G+ ++ L
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M+ I P+ ++ + KEG LL A NL E+ R V + Y+ LI C
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A + + + G P + YN L+ CK V D + L EM + + T
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI +C G+ A + + M++ G+ PD +L++ C + KA ++
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK-GMER 606
K D +YN + + + + L + R G + + MI L + G+ R
Sbjct: 958 KNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRR 1017
Query: 607 K 607
+
Sbjct: 1018 E 1018
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 189/406 (46%), Gaps = 1/406 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+V LL + L + ++M GI + ++F IL H FC+ +
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G+DP +VT+ +L+ +C + R++DAF L M + P++V Y TL++ LCK
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 323 EGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
G V A +L + M +G L+ D+V+YNTL+ C G+ +++ +L +M I PD F
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ + K+G L A L ++ + + + Y+ LI LC R + A + +
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G P++ YN L+ CK V D + L M + TY LI +C +G+
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A + M+ G+ PD +L++G C+ ++ A + +YN +
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIM 422
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + + + EL R G P+ T MI L K R+
Sbjct: 423 IHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 177/384 (46%), Gaps = 8/384 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H + F LI C C+ + + ++ K + +G+ PSIV+ LL+G N
Sbjct: 98 HDLYSFTILIHCFCRCSRLSLALSILG-------KMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG-FDPDLVTYN 279
I + + M + G PN +N L CKNGDV+ L ++E++G DLVTYN
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TL++ C G A + R M +R + PD+ T+T L++ K+G + EA +L+ +M+
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
+ P+ V+YN+LI C G++ +K M G +P+ T ++ G+ K R+
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDG 330
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+ L + R G+ Y+ LI CQ + A + + G P + + L+
Sbjct: 331 MKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHG 390
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC + A++ ++M + Y +I C + EA L + G+ PD
Sbjct: 391 LCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPD 450
Query: 520 SQICRVLINGYCMEKDVNKAEALL 543
++ ++I G C +A+ L
Sbjct: 451 ARTYTIMILGLCKNGPRREADELF 474
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 147/275 (53%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + R + P+++ L++ +K + + +Y+EM R + PN T+
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FC G + + + +G PD+VTYNTLI+ +CK R+ D L+ M
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH 888
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++ D TY TL++G C+ GK+ A ++F+RMV G+ PDIV+YN L+ C GK+++
Sbjct: 889 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEK 948
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ ++ N + D T II+QG + ++ A L L R GV + Y +I
Sbjct: 949 ALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMIS 1008
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
LC++ A L R+ +DG++PS IY+E +
Sbjct: 1009 GLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 8/339 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++H N+ A ++ +V+ +V V+ LI C + +
Sbjct: 133 PSIVTFGSLLHGFCLRNRIHDAFSLVASMVK--SGYEPNVVVYNTLIDCLCKNGDVNIAL 190
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L+ E K R D +V+ N LL GL Q ++ +M + I P+ TF
Sbjct: 191 ELLNEMEKKGRLAAD------LVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTF 244
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L F K G++D+ +++ + P+ VTYN+LI+ C GRL A + +M
Sbjct: 245 TALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMAS 304
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P++VTY TL+NG CK +V + +LF RM GL D +YNTLI YC+ GK++
Sbjct: 305 KGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRV 364
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G+ PD T I++ G G + SA+ +++ + Y+ +I
Sbjct: 365 AKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIH 424
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
LC+ ++ A L R+ +G P Y ++ LCK
Sbjct: 425 GLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCK 463
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 183/405 (45%), Gaps = 44/405 (10%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
+L I ++ +++H ++FS A+ +L ++++L FQ I
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLG---------FQPSIVTLGSLLN 693
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC- 237
+ + +E+ ++G +P++V N ++NGL K ++ +++ M + GI
Sbjct: 694 GFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVA 753
Query: 238 ----------------------------------PNTHTFNILTHVFCKNGDVDKVNGFL 263
PN F L F K G++ +
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ P+++TYN+LI+ +C +GRL DA +++ +M + PD+VTY TL+ G CK
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKS 873
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+V + +LF M H+GL D +YNTLI YC+ GK+ ++ + M+ G+ PD T
Sbjct: 874 KRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTY 933
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I++ G++ AL +V +LQ+ + + Y+ +I +C++++ A L + +
Sbjct: 934 NILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTR 993
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
G Y ++ LC+ +A L M + PS Y
Sbjct: 994 KGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIY 1038
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 6/386 (1%)
Query: 217 KLNCI--DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+L+CI D + ++ EM + P+ F + K D V K+E G D
Sbjct: 590 ELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHD 649
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
L ++ LI +C+ R + A L M + P +VT +L+NG C+ + +EA L
Sbjct: 650 LYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M GL P++V YNT+I CK + + + Y M GI D T ++ G G
Sbjct: 710 SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
R A L+ ++ + + + + LI ++ A +L + + + P++ YN
Sbjct: 770 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ C + DA + D MV + P + TY LI FC R + + L EM
Sbjct: 830 SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G++ D+ LI+GYC +N A+ + D +YN + + +G + K
Sbjct: 890 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949
Query: 575 M----ELQKRFLRLGFAPNNLTCKYM 596
+ +LQK + + N+ + M
Sbjct: 950 LVMVEDLQKNQMDVDIITYNIIIQGM 975
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 133/268 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G R++ + R P + + L++ +K +D+ ++Y++M + I PNT T+
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + C +G + + + +G P++VTYNTLI+ +CK R+ D L++ MYR
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++ D TY TL++G C+ GK+R A +F MV G++PDI+++ L+ C G++
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +M Y I++ G K ++ A L L GV Y +I+
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLE 451
LC++ A L R+ +DG + E
Sbjct: 460 GLCKNGPRREADELFRRMKEDGIICQAE 487
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 142/604 (23%), Positives = 236/604 (39%), Gaps = 124/604 (20%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V+ AL N ++ + Y ++ L ++ ++ A ++L ++ + +
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTK--RRIN 238
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
V F LI A+VK G + E+ + +++ L P+ V+ N L+NGL
Sbjct: 239 PDVFTFTALID-------AFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGR 291
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + ++ M G PN T+N L + FCK+ V+ +++ EG D TYNT
Sbjct: 292 LYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNT 351
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT---------------------------- 312
LI YC+ G+L A ++ M V PD++T
Sbjct: 352 LIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGE 411
Query: 313 -------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
Y +++GLCK KV EA +LF R+ G+ PD +Y +I CK G +E+
Sbjct: 412 KYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 471
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEG---RLLSALNLVVELQRFGVSISRDIYDYL- 421
L M +GI CQ G+ G ++ ++ +R + S D+Y Y
Sbjct: 472 ELFRRMKEDGI-----ICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYS 526
Query: 422 -------IVALCQDNRPFAATS-----------LLERIGQDGYVPSLE------------ 451
+V L P A++S LLER G + S
Sbjct: 527 DTTLWSSLVGLI----PIASSSSVKGFVRRHLLLLER-GNNPESRSFSGASHHHHHHHHH 581
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPS--------------------------- 484
Y E + S C DA L EM+ PS
Sbjct: 582 HYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM 641
Query: 485 --------LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
L ++ LI CFC R A++L+ +M++ G P L+NG+C
Sbjct: 642 ENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRF 701
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A +L+ A+ + YN V N ++ DL+ +E+ + G + +T +
Sbjct: 702 QEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTL 761
Query: 597 IHSL 600
I L
Sbjct: 762 ISGL 765
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 142/310 (45%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +DAF L+ M + +P +V +T ++ + K K LFH+M + G+S D+ S+
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI +C+ + + +LL +MM G P T ++ G+ + R A++LV +
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ + IY+ +I LC++ A + + + G V YN L+ LC DA
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +MV R I P++ + ALI F G EA +L EM+ + P+ LING
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+C++ + A+ + K D +YN + F + + M+L G +
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894
Query: 590 NLTCKYMIHS 599
T +IH
Sbjct: 895 AFTYNTLIHG 904
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDC--PHSVDVFQDLISCTEDCNWAYVKVGL 185
Y ++H K + A K+ +V DC P + + L+ C CN ++ L
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMV----DCGVPPDIVTYNILLDCL--CNNGKIEKAL 950
Query: 186 IR-ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
+ E + + +DV I++ N ++ G+ + + + + W ++ + R G+ + +
Sbjct: 951 VMVEDLQ--KNQMDV----DIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYI 1004
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ C+NG + + +++E+GF P Y+ + +
Sbjct: 1005 TMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 198/429 (46%), Gaps = 35/429 (8%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+G E+ F + G P + LL+G + + M + GI
Sbjct: 235 YCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLE 294
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
H FNIL + KN +DK ++ ++GF P++VTY T+I CK GR+ DA +
Sbjct: 295 DHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFS 354
Query: 300 IMYRRNVLPDLVTYTTLMNGLC-----------------------------------KEG 324
M + PD++T+T+L++GLC KEG
Sbjct: 355 QMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEG 414
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V EAH F +++H G+ PD+VSY LI YC +GKM ES LL M+ G+ PD T
Sbjct: 415 RVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYS 474
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ GY K GR+ AL L E+ V + Y+ ++ L R AA +I
Sbjct: 475 ALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDS 534
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + YN ++ LC+ V +AL + + + + + T+ +I +GR G+A
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA 594
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
SL +L SG++PD+ I ++I + E + +++ L K ++ + NA+
Sbjct: 595 KSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRK 654
Query: 565 FAEDGDLSK 573
E GD+ +
Sbjct: 655 LLEKGDVRR 663
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 203/417 (48%), Gaps = 2/417 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + +K G QP +V+ + L++ K+ + +++ M R G P+ +T+
Sbjct: 204 GQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTY 263
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L H + G + ++ L + ++G + +N LI +Y K L+ A + M +
Sbjct: 264 RTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQ 323
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P++VTYTT+++ LCK G+V +A F +MV GLSPDI+++ +LI C G+ ++
Sbjct: 324 KGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKK 383
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +EM+ GI+P+ I+ KEGR+L A + ++ GV Y LI
Sbjct: 384 VEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILID 443
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C D + + LL R+ G P Y+ L+ CK V DAL L EM +++KP
Sbjct: 444 GYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKP 503
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY ++ GR A ++++SG+ +++ G C V++A +
Sbjct: 504 NAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMF 563
Query: 544 -GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G +K+FQ+ + ++N + + G + L L G P+ + MI S
Sbjct: 564 QGLRSKEFQL-EVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQS 619
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 16/380 (4%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK---------- 287
PN ++N++ + K G+VDK ++ +GF P++VTYN++I CK
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196
Query: 288 ------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
KG+L +A L + M + PD+VTY+ L++ CK G+ EA +F MV RG
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+PD +Y TL+ Y +G + + LL M+ +GI + I+++ Y K L A+
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+E+++ G S + Y +I LC+ R A S ++ +G P + + L+ LC
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
L EM++R I P+ ++ C GR EA D+++ G+ PD
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+LI+GYC++ ++++ LLG D +Y+A+ N + ++G + + L +
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496
Query: 582 LRLGFAPNNLTCKYMIHSLW 601
PN +T ++H L+
Sbjct: 497 FSKDVKPNAITYNIILHGLF 516
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 183/398 (45%), Gaps = 23/398 (5%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKT---FRKTLDVGFQ--PSIVSCNFLLNGLLKLNC 220
F LI C CN + L ES + D G+ P+++S N ++NGL K
Sbjct: 97 FGILIRCF--CNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGE 154
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE---------------- 264
+D+ + ++ EM G PN T+N + CK +DK L+
Sbjct: 155 VDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLK 214
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
K+ G PD+VTY+ LI YCK GR +A ++ M RR PD TY TL++G +G
Sbjct: 215 KMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKG 274
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ + H L M+ G+ + +N LI AY K + ++ + EM G P+ T
Sbjct: 275 ALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYT 334
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ K GR+ A++ ++ G+S + LI LC L +
Sbjct: 335 TVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR 394
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P+ N +M+SLCK V +A D+++ +KP + +Y LI +C G+ E+
Sbjct: 395 GIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDES 454
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ L+ M+ G+ PD+ L+NGYC V+ A AL
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 67/393 (17%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRR----------NVLPDLVTYTTLMNGLCKE 323
D T+ LI +C G L+ A R N P++++Y ++NGL KE
Sbjct: 93 DACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKE 152
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK----------------EGKMQESKSL 367
G+V +A+ LFH M+ +G P+IV+YN++I CK +G+++E+ L
Sbjct: 153 GEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRL 212
Query: 368 LYEMMGNGIYPDTFT--------CQI---------------------------IVQGYGK 392
L +M G G+ PD T C+I ++ GY
Sbjct: 213 LKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYAT 272
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+G L+ +L+ + + G+ + +++ LI A ++ A + + Q G+ P++
Sbjct: 273 KGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVT 332
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y +++ LCK V DA+ +MV + P + T+ +LI C IG + L EM+
Sbjct: 333 YTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMI 392
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVFNMFAEDG 569
G+ P++ +++ C E V +A FF + + D SY + + + DG
Sbjct: 393 NRGIHPNAIFLNTIMDSLCKEGRVLEAH---DFFDQIIHVGVKPDVVSYTILIDGYCLDG 449
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++L R + +G P+N+T +++ K
Sbjct: 450 KMDESIKLLGRMVSIGLRPDNVTYSALLNGYCK 482
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 194/438 (44%), Gaps = 64/438 (14%)
Query: 56 QNPNKIV--DLICSSLKKG---DSH--LTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
QNP+ L+ KG D H L L+ D PL H + +L+R + + +
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH-----VFNILIRAYAKNET 310
Query: 109 ---ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
A+T F ++ P Y ++ IL + A+ ++V + +
Sbjct: 311 LDKAMTAFIEMRQK-GFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS--EGLSPDIIT 367
Query: 166 FQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
F LI CT W V+ + SF+ + G P+ + N +++ L K + +
Sbjct: 368 FTSLIHGLCTIG-EWKKVE----KLSFEMINR----GIHPNAIFLNTIMDSLCKEGRVLE 418
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++++ +G+ P+ ++ IL +C +G +D+ L ++ G PD VTY+ L++
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
YCK GR++DA LYR M+ ++V P+ +TY +++GL G+V A + + ++V G+
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538
Query: 344 DIVSYNTLIFAYC-----------------------------------KEGKMQESKSLL 368
I +YN ++ C K G++ ++KSL
Sbjct: 539 GINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLF 598
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
++ +G+ PD +++Q + +EG L + L + +++ G + + + ++ L +
Sbjct: 599 SAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEK 658
Query: 429 NRPFAATSLLERIGQDGY 446
A + L +I + Y
Sbjct: 659 GDVRRAGTYLTKIDEKEY 676
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 197/407 (48%), Gaps = 2/407 (0%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F L +G+QPS + L+ GL I + Q++++M G P+ T+ L +
Sbjct: 108 AFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLIN 167
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G+ FL +E+ P +V Y+T+I S CK +L +A L+ M + + P
Sbjct: 168 GLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP 227
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ TY++L++GLC G +EA +LF+ M+HR + PD +++NTL+ A CKEG + ++ ++
Sbjct: 228 NNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVV 287
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M+ + + PD T ++ G+ + +N+ + R G S Y LI C+
Sbjct: 288 DVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKI 347
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A L E + Q G +P YN L+ LC + DA+ L EMV P L TY
Sbjct: 348 QIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTY 407
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
R L C R EA+ L+ + + + PD I ++++G C ++ A L +
Sbjct: 408 RILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSS 467
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
K D +Y + N + G L++ +L G +PN C Y
Sbjct: 468 KGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPN--ACTY 512
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 193/399 (48%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ V I ++ F + L + PSIV + LL + ++ +Y++M GI NT
Sbjct: 30 LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T NIL + FC + L I + G+ P T+ TLI C +G++ +A L+
Sbjct: 90 YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M PD++TY TL+NGLCK G A + M R P +V Y+T+I + CK+ +
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ SL +M+ GI P+ FT ++ G G A+ L + + + ++
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ ALC++ A +++ + Q P + YN LM+ C + + + D MV +
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
PS+ +Y LI +C I +A+ L +EM + G++PD+ LI+G C + A
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
AL QI D +Y +F+ ++ L++ M L K
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK 428
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 212/463 (45%), Gaps = 13/463 (2%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTL 197
N+ FA +L ++++L S F LI C E G I E+ + F K
Sbjct: 103 NRLGFAFSVLGDILKL--GYQPSTATFTTLIRGLCVE---------GKIGEALQLFDKMT 151
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
GFQP +++ L+NGL K+ + M + P ++ + CK+ +
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ + +G P+ TY++LI C G +A L+ M R ++PD +T+ TL+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ LCKEG V +AH + M+ L PD+V+YN+L+ +C +M ++ ++ M+ G
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P + ++ GY K + A+ L E+ + G+ Y+ LI LC R A +L
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G +P L Y L + LCK +A+A++L + N+ P + Y ++ C
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G A L ++ G+ PD + ++ING C + + +A L G + + +
Sbjct: 452 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACT 511
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
YN + F + + + ++L + L GF+ + T ++ L
Sbjct: 512 YNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 176/387 (45%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L +N ID ++ M R+ P+ F+ L + V ++++ G +
Sbjct: 30 LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T N LI+S+C RL AF + + + P T+TTL+ GLC EGK+ EA QLF +
Sbjct: 90 YTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDK 149
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G PD+++Y TLI CK G + L M P I+ K+ +
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L AL+L ++ G+S + Y LI LC A L + +P +N
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+++LCK V A + D M+ ++KP + TY +L+ C G+ V++ D M+ G
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+P LINGYC + ++KA L +++ I DT +YN + + G L +
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + G P+ +T + + L K
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCK 416
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 7/238 (2%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K C SV + LI+ Y K+ ++ ++ F + G P V+ N L++GL
Sbjct: 328 KGCVPSVISYTTLIN-------GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ + ++ EM G P+ T+ IL CKN + + L+ IE DPD+
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIH 440
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
Y+ ++ C+ G L A L+ + + + PD+ TYT ++NGLC++G + EA +LF M
Sbjct: 441 IYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
G SP+ +YN + + + + + L EM+ G D T ++V+ +G
Sbjct: 501 DENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 284/648 (43%), Gaps = 83/648 (12%)
Query: 39 SEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRV 98
++H + L++ + PN V I L+ + L + + L L H++ ++
Sbjct: 27 TKHSVSAAKLHDESADASIPNDAVRQILIGLRSFGASKFLWGHHFQTLASVLNTHQVDQI 86
Query: 99 LLRCQSD-SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
LL + D S SAL F+ ++N+ + + ++ ++ H++A + ++L ++VE +
Sbjct: 87 LLSLRVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVE--E 144
Query: 158 DCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTFRKTLDVGFQPSI 205
+ S +L+ C +W AY + ++ ++ K + Q SI
Sbjct: 145 EGSGSAPSLCELL-CNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSI 203
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+ N LL L D W VY E+ G+ N +T IL C+ + FL +
Sbjct: 204 ATYNSLL---YNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRE 260
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
E F P +V++N L+S +CK G ++ A + +M + +LPD+ +Y L++GLC G
Sbjct: 261 TGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGS 320
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA + + M + G+ PDIV+YN L + G + + ++ M+ NG+ PD T I
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTI 380
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G+ + G + + L ++ G+ +S Y L+ +LC+ R A LL + G
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 446 YVPSLEIYN--------ELMESLCK---------CDS----------------------- 465
P L Y+ EL E +C C +
Sbjct: 441 LKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 500
Query: 466 --VADALLLKDEMVD--------------------RNIKPSLSTYRALICCFCGIGRSGE 503
VA+ ++L + M+D + I P++ T+ +LI FC G+ E
Sbjct: 501 SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 560
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
AV L+D + G++P S L+NGYC E D++ +L K +Y V
Sbjct: 561 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 620
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
++G L + ++L K G P+ +T +I S K +++ FQ
Sbjct: 621 GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQ 668
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 164/335 (48%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ F I+ N +++G KL I + + Y+++ GI P TF
Sbjct: 486 GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTF 545
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FCK G + + L+ I+ G P VTY TL++ YC++G ++ F + M
Sbjct: 546 NSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEA 605
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P +TYT ++ GLCKEG++ E+ QL M RGL PD ++YNT+I ++CK +Q+
Sbjct: 606 KAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQK 665
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +M+ + + P T +++ G G L A L+V LQ + +++ Y +I
Sbjct: 666 AFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIK 725
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C A ++ + G+ S+ Y+ ++ LCK + + DA M+ I P
Sbjct: 726 AHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPP 785
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
++ F G + M++ G+LP
Sbjct: 786 DQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 196/438 (44%), Gaps = 29/438 (6%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ ++G I ESFK K L G + SIV+ LL+ L K ID+ + EM IG+ P
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP 443
Query: 239 NTHTFN----------------------------ILTHVFCKNGDVDKVNGFLEKIEEEG 270
+ T++ I++ +F K G + + + + + +
Sbjct: 444 DLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEK-GAISEAQMYFDSVTKSD 502
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+++ YN +I Y K G + +A Y+ + + + P +VT+ +L+ G CK+GK+ EA
Sbjct: 503 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 562
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L + GL P V+Y TL+ YC+EG M +L+EM I P T ++V+G
Sbjct: 563 KLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 622
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
KEGRL ++ L+ + G+ + Y+ +I + C+ + A L ++ Q PS
Sbjct: 623 CKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSP 682
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ LC ++ DA L + D++I+ + Y +I C G A+ +
Sbjct: 683 VTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ 742
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+E G + +IN C + A+ D + + N F GD
Sbjct: 743 MVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGD 802
Query: 571 LSKLMELQKRFLRLGFAP 588
+ + E+ ++ G P
Sbjct: 803 PNSVFEIFAMMIKCGLLP 820
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/512 (25%), Positives = 236/512 (46%), Gaps = 26/512 (5%)
Query: 84 KPLLPHLGAHEISRVLLRCQS---DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
K L P + A ++ L R +S + +AL FF W+ + T+ ++ ++H+L+
Sbjct: 46 KRLAPSVTAAHVAD-LFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLS--- 101
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
+ P ++ L+ +C+ + + ++ + R+T
Sbjct: 102 ---------------RRRAPAQ---YERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSAR 143
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
S NF L L + + + +VY ++ + G+ P+T T+N + +CK GD+ +
Sbjct: 144 LALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAH 203
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ E G +P+ T N L+ YC+ G L A +L+ +M + +YT L+ GL
Sbjct: 204 RCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGL 263
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C+ VREA LF M G SP++ ++ LI CK G++ +++ L M NG+ P
Sbjct: 264 CEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSV 323
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ GY K GR+ AL + +++ G Y+ LI LC D + A LL
Sbjct: 324 MTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNN 382
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
++G+ P++ + L+ C + DAL +K++M+ K L + LI R
Sbjct: 383 AVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR 442
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L++E+ +G++P+ +I+GYC V+ A +L + + +YN+
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ +D L K M L + + G PN +T
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 189/405 (46%), Gaps = 5/405 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P++V+ L+NG D ++ +M + F L + K + +
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L +I G P+++TY ++I YCK G+++ A + ++M R P+ TY +LM G
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L K+ K+ +A L +M G+ P++++Y TL+ C E + L M NG+ PD
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ-DNRPFAATSLL 438
++ K GR A + +V R GV++++ Y LI + N FAAT L+
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAAT-LI 622
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
ER+ +G P Y+ L+ +LCK + +AL + D+M R IK ++ Y LI
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ A + +EM SG P + V IN YC E + AE L+ ++ D +Y
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + KR + PN T ++ L KG
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 198/442 (44%), Gaps = 19/442 (4%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ VK + ++ K G P++++ LL G + D ++++E M + G+
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ H + +LT CK G ++ F I +G V Y TLI + K G + A L
Sbjct: 565 PDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD TY+ L++ LCK+ ++ EA + +M RG+ I +Y LI +
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
EGK +K + EM +G P T + + Y KEGRL A +L+++++R GV+
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD-----SVADALL- 471
Y+ LI A S L+R+ P+ Y L++ L K + SV + +
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801
Query: 472 ----------LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
L + MV + P+++TY +LI FC GR EA L+D M G+ P+
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
I +LI C K KA + + ++ ESY + +GD K+ L
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
L LG+ + + K + L K
Sbjct: 922 LELGYNHDEVAWKILNDGLLKA 943
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 21/283 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K G + ++ K G P +V+ N L++G + ID+ + + M P
Sbjct: 713 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772
Query: 239 NTHTFNILTHVFCKNG----------------DVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
N T+ +L K ++D LE++ + G +P + TY++LI
Sbjct: 773 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK GRL +A L M + + P+ YT L+ C +A M G
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQ 892
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P + SY L+ C EG ++ KSL +++ G D +I+ G K G + +
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 952
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+ +++ IS Y AL + ++SL+ + ++
Sbjct: 953 LSIMEKRYCCISSQTY-----ALVTNKMHEVSSSLVSEVREEA 990
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 235/518 (45%), Gaps = 23/518 (4%)
Query: 85 PLLPHLGAHEISRVLL---RCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHIL---AW 138
P+ HL ++V++ +++ A ++FN +K Y IV IL W
Sbjct: 49 PVTNHLFEINTAKVVITLNNLRNEPSLAFSYFNQLKES-GYSHDPYTYAAIVRILCFWGW 107
Query: 139 NNKF-SFAMKML----------CELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
+ K S M+++ L E + D + + F L+ ++ V G+
Sbjct: 108 SRKLDSILMEIIKKDGNLDFGIVNLFEALGDGIAN-ESFSVLVQVSDALIKVCVASGMFD 166
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F +T GF P I+SCNFL+N L++ +D +Y ++ G+ PN +T+ I
Sbjct: 167 QAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAI 226
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FC+ G++ + +EE G P+ +Y T I C GR + F + + + +
Sbjct: 227 KGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIP 286
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D+ YT ++ G C E K++EA + M +G +PD+ Y LI YC G + ++ +L
Sbjct: 287 MDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALAL 346
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ G+ + I+QG + G N E ++ G+ Y+ ++ ALC+
Sbjct: 347 HDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCK 406
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A LL + VP + Y ++ V DAL + EM D KP + T
Sbjct: 407 LGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVT 466
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L F G + EA+SL++ M G+ PD+ ++I G C+ V+ A+A
Sbjct: 467 YNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLE 526
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+K E+Y+A+ N + E ++K L R + G
Sbjct: 527 EKC----LENYSAMVNGYCEANHVNKAFALLIRLSKQG 560
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 194/426 (45%), Gaps = 67/426 (15%)
Query: 142 FSFAMKMLCEL------VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
++ M LC+L VEL+ + + D+I+ T + ++K G + ++ +R+
Sbjct: 397 YNVVMDALCKLGKVEEAVELLVEMKGK-KMVPDIINYTTVISGYFLK-GKVVDALNIYRE 454
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
D+G +P IV+ N L G + + + M G+ P+T T N++ C G
Sbjct: 455 MKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGK 514
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-------RIMYRR---- 304
VD F + +EE+ + Y+ +++ YC+ +N AF L RI+ +
Sbjct: 515 VDDAQAFFDNLEEKCLE----NYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFK 570
Query: 305 ------------------------NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
N+ P ++ Y+ ++ L + G++ +A +F+ +V RG
Sbjct: 571 LLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG 630
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L+PD+++Y +I YC+ KM+E+ +L +M GI PD T +++ K
Sbjct: 631 LAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSK-------- 682
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++L+ S+ A+ ++L + P + Y L++
Sbjct: 683 ---IDLRSSSSSLD---------AMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKH 730
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +++ DA+ L +EM+DR + P TY AL+ +C +G +AV L DEML G+ PD+
Sbjct: 731 CKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDA 790
Query: 521 QICRVL 526
VL
Sbjct: 791 HTMSVL 796
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 202/442 (45%), Gaps = 13/442 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P S +Y + L + + K+L +++ + +DVF + C+ +
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVI----NAKIPMDVFAYTVVIRGFCSEMKL 305
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K E+ R+ GF P + L++G + + + +++EM G+ N
Sbjct: 306 K-----EAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCV 360
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + + G +V ++ ++ G D YN ++ + CK G++ +A L M
Sbjct: 361 ILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEM 420
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++PD++ YTT+++G +GKV +A ++ M G PDIV+YN L + + G
Sbjct: 421 KGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLT 480
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
QE+ SLL M G+ PDT T +I++G G++ A L+ + + Y +
Sbjct: 481 QEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCL----ENYSAM 536
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C+ N A +LL R+ + G + + +L+ +LC AL L + MV NI
Sbjct: 537 VNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNI 596
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ Y +I G +A + + +++ G+ PD ++INGYC + +A
Sbjct: 597 NPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWH 656
Query: 542 LLGFFAKKFQIYDTESYNAVFN 563
+LG + D +Y + N
Sbjct: 657 VLGDMKNRGIEPDVITYTVLLN 678
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/481 (22%), Positives = 209/481 (43%), Gaps = 55/481 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y VG + ++ + + G + + V + +L GL ++ + ++E ++GI
Sbjct: 333 GYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFF 392
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N++ CK G V++ L +++ + PD++ Y T+IS Y KG++ DA +Y
Sbjct: 393 DEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIY 452
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M PD+VTY L G + G +EA L + M +G+ PD V++N +I C
Sbjct: 453 REMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIG 512
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ ++++ + + + ++ +V GY + + A L++ L + G + + +
Sbjct: 513 GKVDDAQAFFDNLEEKCL--ENYSA--MVNGYCEANHVNKAFALLIRLSKQGRILKKASF 568
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC + A LLE + P++ +Y++++ +L + + A + + +VD
Sbjct: 569 FKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVD 628
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD------------------- 519
R + P + TY +I +C + + EA ++ +M G+ PD
Sbjct: 629 RGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSS 688
Query: 520 ------------------------------SQIC-RVLINGYCMEKDVNKAEALLGFFAK 548
IC VLI+ +C ++ A L
Sbjct: 689 SSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMID 748
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ DT +Y A+ + + G++ K + L L G P+ T ++H + K + F
Sbjct: 749 RGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMS-VLHCILKVRKVHF 807
Query: 609 Q 609
Sbjct: 808 H 808
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 122/283 (43%), Gaps = 22/283 (7%)
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYC-----------------KEGKMQESKSLLYEM 371
A F+++ G S D +Y ++ C K+G + L+E
Sbjct: 76 AFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEA 135
Query: 372 MGNGIYPDTFTCQI-----IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+G+GI ++F+ + +++ G A +++++ + G + ++L+ L
Sbjct: 136 LGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLV 195
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A ++ ++ G P+ Y ++ C+ ++A+A+ + +M + + P+
Sbjct: 196 ESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSF 255
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+Y I C GRS ++ +++ + + D V+I G+C E + +AE++L
Sbjct: 256 SYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREM 315
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
K+ D Y A+ + + G+L K + L + G N
Sbjct: 316 EKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTN 358
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 245/517 (47%), Gaps = 32/517 (6%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ F + L PT + ++H L ++ S A+ + ++ C +V F
Sbjct: 132 ALSTFGKI-TKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM------CKPNVVTFTT 184
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ + G + E+ + L+ G QP+ ++ +++G+ K+ +
Sbjct: 185 LMN-------GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLL 237
Query: 229 EEMGRIG-ICPNTHTFNI-----LTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTL 281
+M + I PN + + + + FC +G + L E +E + PD+VTYN L
Sbjct: 238 RKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNAL 297
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+++ K+G+ +A LY M R ++P +TY+++++G CK+ ++ A +F+ M +G
Sbjct: 298 INAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 357
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
SPDI+++NTLI YC+ ++ + LL+EM G+ +T T ++ G+ + G L +A +
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 417
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ-----------DGYVPSL 450
L+ E+ GV + + L+ LC + + A + + + + +G P +
Sbjct: 418 LLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDV 477
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+ YN L+ L +A L +EM R I P TY ++I C R EA + D
Sbjct: 478 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDS 537
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M P+ LINGYC V+ L ++ + + +Y + + F + G+
Sbjct: 538 MGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGN 597
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
++ +++ + + G P+ +T + M+ LW E K
Sbjct: 598 INGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELK 634
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 11/352 (3%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N L+N +K + ++Y+EM GI P+T T++ + FCK +D
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ +G PD++T+NTLI+ YC+ R++D L M ++ + +TYTTL++G C+
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG--------- 373
G + A L MV G+ P++V+ NTL+ C GK++++ + M
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468
Query: 374 --NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
NG+ PD T I++ G EG+ L A L E+ G+ Y+ +I LC+ +R
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
AT + + +G + P++ + L+ CK V D L L EM R I + TY L
Sbjct: 529 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 588
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
I F +G A+ + EM+ SG+ PD+ R ++ G ++++ +A A+L
Sbjct: 589 IHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 199/453 (43%), Gaps = 57/453 (12%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS++ L+ ++++ +D ++ +M + N ++F IL FC +
Sbjct: 76 PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
KI + GF P +VT++TL+ C + R+++A L+ M + P++VT+TTLMNGLC+
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCR 191
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNT-------------------------------- 350
EG+V EA L RM+ GL P+ ++Y T
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 351 ---------LIFAYCKEGKMQESKSLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+I +C G+ E++ LL EM+ I PD T ++ + KEG+ A
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L E+ G+ S Y +I C+ NR AA + + G P + +N L+
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C+ V D + L EM + + + TY LI FC +G A L+ EM+ SG+ P+
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAK-KFQI----------YDTESYNAVFNMFAEDG 569
C L++G C + A + K K I D ++YN + + +G
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ EL + G P+ +T +IH L K
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCK 524
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 13/398 (3%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +G ++ ++ ++ +M R P+ F L V + G +D V K+E
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ ++ L+ +C +L A + + + P +VT++TL++GLC E ++ EA
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
LFH+M P++V++ TL+ C+EG++ E+ +LL M+ +G+ P+ T IV G
Sbjct: 169 DLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDY-------LIVALCQDNRPFAATSLLERIGQ 443
K G +SALNL+ +++ I ++ + +I C R A LL+ + +
Sbjct: 225 CKMGDTVSALNLLRKMEEVS-HIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLE 283
Query: 444 DGYV-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P + YN L+ + K +A L DEM+ R I PS TY ++I FC R
Sbjct: 284 RKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLD 343
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A + M G PD LI GYC K V+ LL + + +T +Y +
Sbjct: 344 AAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 403
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F + GDL+ +L + + G PN +TC ++ L
Sbjct: 404 HGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGL 441
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 128/240 (53%), Gaps = 11/240 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---- 234
+ +VG + + ++ + G P++V+CN LL+GL + ++++ M +
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 464
Query: 235 -------GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
G+ P+ T+NIL G + E++ G PD +TYN++I CK
Sbjct: 465 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCK 524
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ RL++A ++ M ++ P++VT+TTL+NG CK G+V + +LF M RG+ + ++
Sbjct: 525 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 584
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y TLI + K G + + + EMM +G+YPDT T + ++ G + L A+ ++ +LQ
Sbjct: 585 YITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 213/440 (48%), Gaps = 7/440 (1%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI+C + ++GL SF F K L G+ P+ ++ N L+ GL I Q
Sbjct: 99 FNILINC-------FSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQAL 151
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++++ G + ++ L + CK G + L++++ + P+ V YN +I +
Sbjct: 152 HFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNM 211
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK +NDAF LY M + + PD+ TY L++G K+ A LF++M ++P++
Sbjct: 212 CKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNV 271
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++N L+ +CKEGK+ ++K +L MM + I PD T ++ GY ++ A ++
Sbjct: 272 YTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDS 331
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ GV + IY ++ C+ A +L E + +P++ Y+ L++ LCK
Sbjct: 332 MASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ AL L DEM DR P++ TY +++ C +A++L+ + + G+ PD +
Sbjct: 392 IFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI 451
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI G C + A+ + K D +Y + F + G K + L + G
Sbjct: 452 LIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNG 511
Query: 586 FAPNNLTCKYMIHSLWKGME 605
PN T + +I SL++ E
Sbjct: 512 CIPNAKTYELVILSLFEKDE 531
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 189/363 (52%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG I + + ++ QP+ V N +++ + K ++ + +Y +M ICP+
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L F ++ K+++E +P++ T+N L+ +CK+G++NDA + IM
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++ PD+VTY +LM+G C KV +A +F M G+ ++ Y T++ +CK +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM I P+ T ++ G K GR+ AL LV E+ G + Y +
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC+++ A +LL + G P + Y L++ LC+ + DA + ++++ +
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAE 540
+ Y +I FC G +A++L+ +M ++G +P+++ ++I EKD N AE
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILS-LFEKDENDTAE 536
Query: 541 ALL 543
LL
Sbjct: 537 KLL 539
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 163/336 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K L+ ++F + + + P + + N L++G ++ ++ ++ +M + I PN +
Sbjct: 213 KAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVY 272
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNIL FCK G V+ L + ++ PD+VTYN+L+ YC ++N A ++ M
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM 332
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V+ ++ YTT++NG CK V EA LF M R + P++V+Y++LI CK G++
Sbjct: 333 ASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI 392
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ EM G P+ T I+ K + A+ L+ L+ G+ Y L
Sbjct: 393 FYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTIL 452
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LCQ R A ++ E + GY + Y +++ C AL L +M D
Sbjct: 453 IKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGC 512
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ TY +I + A L+ EM+ G+L
Sbjct: 513 IPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%)
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++ +N P + +++ L K A L +M G+ D ++N LI + +
Sbjct: 50 HLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQL 109
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G S S+ +++ G +P T +++G +G + AL+ ++ G + + Y
Sbjct: 110 GLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSY 169
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ R AA LL+R+ P+ +YN +++++CK V DA L +MV
Sbjct: 170 GTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVA 229
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ I P + TY ALI F + + A+ L ++M + + P+ +L++G+C E VN
Sbjct: 230 KRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVND 289
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
A+ +L K D +YN++ + + ++K ++
Sbjct: 290 AKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDI 328
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 149/330 (45%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P +N ++SS K + A L++ M + D T+ L+N + G + +
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F +++ +G P +++NTLI C +G + ++ +++ G + D + ++ G K
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR+ +AL L+ + V + +Y+ +I +C+ A L ++ P +
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ + A+ L ++M NI P++ T+ L+ FC G+ +A ++ M+
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + PD L++GYC VNKA+ + A I + + Y + N F + +
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + L + PN +T +I L K
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCK 388
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+ ++ E+ F + P++V+ + L++GL KL I ++ +EM G P
Sbjct: 350 GFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ + CKN VDK L ++++G PD+ TY LI C+ GRL DA ++
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + D+ YT ++ G C +G +A L +M G P+ +Y +I + ++
Sbjct: 470 EDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEK 529
Query: 359 GKMQESKSLLYEMMGNGI 376
+ ++ LL EM+ G+
Sbjct: 530 DENDTAEKLLREMIVRGL 547
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 216/435 (49%), Gaps = 18/435 (4%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM----GRIGI-C-PN 239
I E+ + F +G +P ++ L+ GL + I+ Q+++EM GR GI C P
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+++I+ CK+ D+ ++++ +G PD+++Y TLI +C G+ A L+
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + PD+ T + L++ LCK+GKV EA++L ++ RG PD+V+ TL+ C +
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL----NLVVELQRFGVSISR 415
++ ++ L +M G P+ TC +++G + G + AL N++ + +G++
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481
Query: 416 DIYDYLIV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y I+ LC+ R A L + + G +P + Y L+ C+ DA L
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+EMVD ++P ++T+ LI C G+ EA L++ M++ G +P++ L+ G CM
Sbjct: 542 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 601
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR------LGFA 587
+++A L K + D +Y + + G++ +EL K+ L F
Sbjct: 602 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 661
Query: 588 PNNLTCKYMIHSLWK 602
P+ ++ +I L K
Sbjct: 662 PDVISYSIIIDGLCK 676
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 240/492 (48%), Gaps = 27/492 (5%)
Query: 102 CQSDSV-SALTFFNWVKND-----LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
CQ+ ++ +AL + ND ++ KPT +Y +I+ L + + A ++ E+
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM--- 328
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+ + D+IS T + + G ++ F + LDVG QP + + + L++ L
Sbjct: 329 -----KAQGIMPDVISYTTLIH-GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 382
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K + + ++ E + + G P+ T L C + K K+++ G P++
Sbjct: 383 CKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 442
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIM------YRRNVLPDLVTYTTLMNGLCKEGKVREA 329
VT TL+ C+ G + A L++ M Y N P+ ++Y+ +++GLCK G+ EA
Sbjct: 443 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 502
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+LF M G+ PD++SY +LI +C+ GK +++K L EM+ G+ PD T +++
Sbjct: 503 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
KEG+++ A L+ + + G + Y L+ LC ++R AT L ++ + G +P
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVD------RNIKPSLSTYRALICCFCGIGRSGE 503
+ Y LM+ LC+ ++ AL L +M+ N KP + +Y +I C GR E
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L EM G++P+ LI+G+C + A+ L + + +Y+ + +
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 742
Query: 564 MFAEDGDLSKLM 575
F ++G + K +
Sbjct: 743 GFCKEGQIDKAL 754
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 202/416 (48%), Gaps = 12/416 (2%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L VG QP + + L++ K + + ++ E M + G + T++ L C +
Sbjct: 2 LHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRI 61
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM------YRRNVLPDL 310
+ +++ G PD + Y TL+ C+ G++N A +L++ M Y P L
Sbjct: 62 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTL 121
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
V+Y+ +++GLCK+ + EA +LF M +G+ PD++SY +LI +C+ GK +++K L E
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ GI D T +++ KEG+++ A L+ + + G + Y LI LC +R
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN------IKPS 484
AT L + + G P Y LM+ LC+ ++ AL L EM++ KP+
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
L +Y +I C R EA L EM G++PD LI+G+C+ KA+ L
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D + + + +M + G + + +L + ++ G P+ +TC ++ L
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 241/552 (43%), Gaps = 62/552 (11%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C +S T L +P + Y ++ L K + A+ + E++
Sbjct: 56 CMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN------- 108
Query: 162 SVDVFQDLISCTED-CNWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
D Q I C +++ + GL + E+ + F++ G P ++S L++G
Sbjct: 109 --DTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ ++ ++ EM +GI + T ++L + CK G V + N LE + + G D+
Sbjct: 167 CRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR-------- 327
VTY+TLI C K R+++A L+ M + PD + Y TLM GLC+ G +
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286
Query: 328 ---------------------------------EAHQLFHRMVHRGLSPDIVSYNTLIFA 354
EA +LF M +G+ PD++SY TLI
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+C GK +++K L EM+ GI PD T +++ K+G+++ A L+ + + G
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
L+ LC +R AT L ++ + G +P++ LM+ LC+ ++ AL L
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466
Query: 475 EMVDR------NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
M+ N KP+ +Y +I C GR EA L EM G++PD LI+
Sbjct: 467 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 526
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
G+C A+ L D +++ + +M ++G + + EL + ++ G P
Sbjct: 527 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 586
Query: 589 NNLTCKYMIHSL 600
N +T ++ L
Sbjct: 587 NTVTYTTLVKGL 598
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 200/432 (46%), Gaps = 23/432 (5%)
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ----VYEEMGRIGICPNTHT 242
RE FK + G P ++S L++G C+ W+ ++ EM +GI P+ T
Sbjct: 322 RELFKEMKAQ---GIMPDVISYTTLIHGF----CLSGKWEKAKCLFNEMLDVGIQPDVTT 374
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++L + CK G V + N LE + + G PD+VT TL+ C K R++ A L+ M
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR----GLS--PDIVSYNTLIFAYC 356
+ +P++VT TLM GLC+ G ++ A +L M+ G++ P+ +SY+ +I C
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E++ L EM G+ PD + ++ G+ + G+ A L E+ GV
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ LI LC++ + A LLE + Q G +P+ Y L++ LC D +++A L +M
Sbjct: 555 TFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE------SGMLPDSQICRVLINGY 530
P + TY L+ C G A+ L +ML + PD ++I+G
Sbjct: 615 QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGL 674
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C ++A L I + SY ++ + F G L L + G N
Sbjct: 675 CKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNA 734
Query: 591 LTCKYMIHSLWK 602
+T MIH K
Sbjct: 735 VTYSVMIHGFCK 746
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 223/501 (44%), Gaps = 18/501 (3%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
Q +++ +L FF+W+ + P SS+ ++ L + A L K P S
Sbjct: 137 QKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSFLDSTNFNPK--PAS 194
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
++ + I C K GL+ E+ F + +G SI + N +L G ++ ID
Sbjct: 195 LEAY---IRCL-------CKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRID 244
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
W++Y EM + + HT L FC + + L ++ E+G P +N LI
Sbjct: 245 FVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLI 304
Query: 283 SSYCKK---GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
S +CK GR++D L M RN PD+ TY ++NGLCK GK E ++F + R
Sbjct: 305 SGFCKDKAYGRVSD---LLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDR 361
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G +PD V Y T+I C+ + +++ L +EM+ G P+ +T ++ GY K G L A
Sbjct: 362 GYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEA 421
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+ E+ G Y+ +I LC + A L E + G + + YN L+
Sbjct: 422 WKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRG 481
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK + + L E++D+ I+PS ++Y LI C G A L D+M GM P
Sbjct: 482 FCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPA 541
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+I G+C + + L + +S+ ++ ++ L + +
Sbjct: 542 VCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLD 601
Query: 580 RFLRLGFAPNNLTCKYMIHSL 600
L++GF + C ++ L
Sbjct: 602 SMLKIGFRLSISICNSLVTKL 622
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 152/293 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E F+ F+ D G+ P V +++GL ++ + +++ EM + G PN +
Sbjct: 344 KGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEY 403
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + H + K G++++ ++ ++G+ V+YN +I C G++ +A L+ M
Sbjct: 404 TYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEM 463
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ +L + +TY L+ G CKEGK+ E L + ++ +G+ P SY LI C+EG M
Sbjct: 464 SHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDM 523
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q +K L +M G+ P T ++ G+ K+G + + + + R + + ++ L
Sbjct: 524 QNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRPQKKSFESL 583
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
I L Q +R A +L+ + + G+ S+ I N L+ LC+ +S+ ++ D
Sbjct: 584 IQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKLCEKNSLPILKIVND 636
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 129/339 (38%), Gaps = 54/339 (15%)
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVL----------------PDLVTYTTLMNGLCKE 323
TL+S + L+ F + + +++N L PD + L + L +
Sbjct: 114 TLLSDFPSFNFLDPTFLSHFVEHQKNALISLRFFHWLSSQSGFSPDSSSCNVLFDALVEA 173
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G A +P S I CK G ++E+ S+ ++ G G+ T
Sbjct: 174 GACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATW 230
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++G + GR+ L E+ V YL+ A C +NR +LL R+ +
Sbjct: 231 NSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLE 290
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
DG VP +N+L+ CK + L M+ RN P + TY+ ++ C G+ E
Sbjct: 291 DGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPE 350
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
+ ++ + G PD + +I+G C K + A L F
Sbjct: 351 GFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLW------------------FE 392
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
M +QK GF PN T MIH +K
Sbjct: 393 M------------IQK-----GFLPNEYTYNAMIHGYFK 414
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 200/424 (47%), Gaps = 36/424 (8%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P+ VS L+ L Q + +M G+ P+ T+ L C DVDK
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ E G +P++V Y+ L+ YCK GR ++ M R + PD+V YT L++ LC
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+EGKV++A Q+ +M+ RGL P++V+YN LI + CKEG ++E+ SL M+ G+ D
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV 289
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRPFAATSLLE 439
T ++ G + A+ L+ E+ + ++ ++ +I LC+ R A + +
Sbjct: 290 TYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRD 349
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++G +L +N L+ L + V A+ L DEM ++P TY LI FC +
Sbjct: 350 MMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMW 409
Query: 500 RSGEAVSLMDEMLESGMLPD--------SQICR--------------------------V 525
+ A SL+ +M G+ P+ + +C
Sbjct: 410 QVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYST 469
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+I+G C +D AE L + I D+ +Y+ + NMFA GDL + K+ G
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529
Query: 586 FAPN 589
F P+
Sbjct: 530 FVPD 533
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 220/459 (47%), Gaps = 12/459 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E +PT+ +Y ++ L + A+ +L ++ V + LI C+ A
Sbjct: 108 ETRPTAVSYTTLMRALCAERRTGQAVGLLRDM--QASGVRPDVVTYGTLIRGL--CDAAD 163
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V ++ + R+ + G +P++V + LL G K + +V+EEM GI P+
Sbjct: 164 VD-----KAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDV 218
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+ L C+ G V K ++K+ E G +P++VTYN LI+S CK+G + +A L
Sbjct: 219 VMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNN 278
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH--RGLSPDIVSYNTLIFAYCKE 358
M + V D VTY TL+ GL ++ EA L M+H + P++V++N++I CK
Sbjct: 279 MLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKT 338
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M+++ + M NG + T +++ G + ++ A+ L+ E+ G+ Y
Sbjct: 339 GRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTY 398
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ + A SLL ++ +DG P L Y L+ +LC+ + A DEM
Sbjct: 399 SILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-H 457
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+N K + Y +I C + A + ML+ G++PDS +LIN + D+
Sbjct: 458 KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGA 517
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
AE +L + D ++++ + GD K++EL
Sbjct: 518 AERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLEL 556
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 193/400 (48%), Gaps = 3/400 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G K F + G +P +V L++ L + + + QV ++M G+ P
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N+L + CK G V + + E+G D VTYNTLI+ +++A L
Sbjct: 252 NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLL 311
Query: 299 RIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M + P++VT+ ++++GLCK G++R+A Q+ M G + ++V++N LI
Sbjct: 312 EEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL 371
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ K++++ L+ EM +G+ PD+FT I++ G+ K ++ A +L+ +++R G+
Sbjct: 372 RVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELV 431
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+ ALC+ A + + + ++ + + Y+ ++ C+ A M
Sbjct: 432 HYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHM 490
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+D + P TY LI F G G A ++ +M SG +PD + LI GY + D
Sbjct: 491 LDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDT 550
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
K L+ K D++ + ++ + + L++
Sbjct: 551 EKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQ 590
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 168/332 (50%), Gaps = 4/332 (1%)
Query: 274 DLVTYNTLISSYCKKGR-LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
D V+YNT++++ C++G L+ A +L R+M P V+YTTLM LC E + +A L
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET-RPTAVSYTTLMRALCAERRTGQAVGL 135
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M G+ PD+V+Y TLI C + ++ LL EM +GI P+ ++QGY K
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR + E+ G+ +Y LI +LC++ + AT +++++ + G P++
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ S+CK SV +A+ L++ M+++ + TY LI G+ EA+ L++EM+
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315
Query: 513 --ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
E+ + P+ +I+G C + +A + A+ + ++N +
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K MEL G P++ T +I+ K
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCK 407
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 180/410 (43%), Gaps = 52/410 (12%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++N + C+ G FL ++ P V+Y TL+ + C + R A L R M
Sbjct: 80 SYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDM 139
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQL----------------------------- 332
V PD+VTY TL+ GLC V +A +L
Sbjct: 140 QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRW 199
Query: 333 ------FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
F M RG+ PD+V Y LI + C+EGK++++ ++ +MM G+ P+ T ++
Sbjct: 200 ECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVL 259
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI--GQD 444
+ KEG + A++L + GV++ Y+ LI L A LLE + G+
Sbjct: 260 INSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGET 319
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
P++ +N ++ LCK + A ++D M + +L T+ LI + + +A
Sbjct: 320 MVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKA 379
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ LMDEM SG+ PDS +LING+C V++AE+LL + + Y +
Sbjct: 380 MELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAA 439
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKY-------MIHSLWKGMERK 607
E G +ME + F F + CK MIH + +RK
Sbjct: 440 LCEQG----MMEQARNF----FDEMHKNCKLDVVAYSTMIHGACRLRDRK 481
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 211/412 (51%), Gaps = 3/412 (0%)
Query: 192 TFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ K +DV G + ++V+ + L+N L + + + ++ ++G PNT T+ L
Sbjct: 31 SLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGL 90
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C G+V K+ F +K+ + F + V+Y TL++ CK G A L R++ R+ P++
Sbjct: 91 CLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNV 150
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
V Y+ +++GLCK+ V EA+ L+ M R + P++++YNTLI A+C G++ + SLL+E
Sbjct: 151 VMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHE 210
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ I PD +T I++ KEG+ +A + + + GV+ + Y+ +I LC+ R
Sbjct: 211 MILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A +LL + VP YN L++ LCK + AL L +EM R + TY +
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ C +A +L +M E G+ P LI+G C + A+ L K
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +Y + + ++G + + ++ + G PN +T + +I SL++
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFE 440
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 192/364 (52%), Gaps = 10/364 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN---CIDQCWQVYEEMGRIGICPNT 240
G +++ K + FQ + VS LLNGL K C + ++ E+ PN
Sbjct: 94 GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTR---PNV 150
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++ + CK+ V++ +++ P+++TYNTLI ++C G+L AF L
Sbjct: 151 VMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHE 210
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +N+ PD+ T++ L++ LCKEGK A Q+FH MV G++P++ SYN +I CK +
Sbjct: 211 MILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 268
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ +LL EM+ + PDT T ++ G K GR+ SALNL+ E+ G Y
Sbjct: 269 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ ALC++ AT+L ++ + G P++ Y L++ LCK + +A L ++ +
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KA 539
+ TY +I C G EA+++ +M ++G +P++ ++I EKD N KA
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL-FEKDENDKA 447
Query: 540 EALL 543
E LL
Sbjct: 448 EKLL 451
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 196/400 (49%), Gaps = 6/400 (1%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
I+ N +L L+KL + ++M GI N T +IL + FC G + L
Sbjct: 10 IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
KI + G+ P+ +T+ TL+ C KG + + + + + + V+Y TL+NGLCK G
Sbjct: 70 KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ R A +L + R P++V Y+ +I CK+ + E+ L EM I+P+ T
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIG 442
++ + G+L+ A +L+ E+ +I+ D+Y + LI ALC++ + A + +
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEM--ILKNINPDVYTFSILIDALCKEGKN--AKQIFHAMV 245
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
Q G P++ YN ++ LCKC V +A+ L EM+ +N+ P TY +LI C GR
Sbjct: 246 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 305
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A++LM+EM G D L++ C ++++KA AL ++ +Y A+
Sbjct: 306 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 365
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G L EL + L G + T MI L K
Sbjct: 366 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 405
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 2/336 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G R + K R D +P++V + +++GL K +++ + +Y EM I PN
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FC G + L ++ + +PD+ T++ LI + CK+G+ +A ++ M
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P++ +Y ++NGLCK +V EA L M+H+ + PD V+YN+LI CK G++
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 304
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ +L+ EM G D T ++ K L A L ++++ G+ + Y L
Sbjct: 305 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 364
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A L + + G + Y ++ LCK +AL +K +M D
Sbjct: 365 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 424
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ T+ +I + +A L+ EM+ G+L
Sbjct: 425 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 134/267 (50%), Gaps = 2/267 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ G + +F + + P + + + L++ L K Q++ M ++G+ P
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNP 251
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +++NI+ + CK VD+ L ++ + PD VTYN+LI CK GR+ A L
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R D+VTYT+L++ LCK + +A LF +M RG+ P + +Y LI CK
Sbjct: 312 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 371
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++ ++ L ++ G D +T +++ G KEG AL + +++ G + +
Sbjct: 372 GRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 431
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDG 445
+ +I +L + + A LL + G
Sbjct: 432 EIIIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
EI P Y ++ + A +L E++ +K+ V F LI A
Sbjct: 180 EIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI--LKNINPDVYTFSILID-------AL 230
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + + + F + +G P++ S N ++NGL K +D+ + EM + P+T
Sbjct: 231 CKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDT 288
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L CK+G + + ++ G D+VTY +L+ + CK L+ A L+
Sbjct: 289 VTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMK 348
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + P + TYT L++GLCK G+++ A +LF ++ +G D+ +Y +I CKEG
Sbjct: 349 MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGM 408
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
E+ ++ +M NG P+ T +II++
Sbjct: 409 FDEALAIKSKMEDNGCIPNAVTFEIIIR 436
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 243/533 (45%), Gaps = 62/533 (11%)
Query: 109 ALTFFNWVKNDLEIKP----TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
AL FFN + IKP T ++ ++ IL NN F K+ + ++K C SVD
Sbjct: 102 ALQFFNSLP---LIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIR---ISMIKACV-SVD 154
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ L+ N R D+ F+ S+ S N LL L + ID+
Sbjct: 155 DIRFLLDFLRQMN----------------RDDNDIKFKLSVRSYNELLMMLARFLMIDEM 198
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+VY EM I PN +T N + + + K G++ + N ++ KI + G PD TY +LI
Sbjct: 199 KRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILG 258
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM-------- 336
YC+ +N A+ ++ +M + + V+YTT+++GLC+ G++ E LF +M
Sbjct: 259 YCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPT 318
Query: 337 -------VH--------------------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+H R P++ +Y ++ A CKE K+ ES+ +L
Sbjct: 319 VRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILN 378
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EMM G+ P T +++GY +EGR+ +AL ++ ++ + Y+ LI +
Sbjct: 379 EMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRK 438
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A +LL ++ + PSL YN L+ CK A L D + + + P TY
Sbjct: 439 HVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS 498
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
I C R EA L + + E G+ + + LI+G+C +++A +LL +
Sbjct: 499 VFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSE 558
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ ++ +YN++ ++G + + + + + ++G P T +I + +
Sbjct: 559 DCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 196/423 (46%), Gaps = 8/423 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I E F+K + P++ + +++ L + + ++ EM PN H
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ ++ CK +D+ L ++ E+G P +VTYN LI YC++GR+ A + +M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N P+ TY L+ G K V +A L +M+ L+P +V+YN+LI CK G
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL + NG+ PD +T + + K R+ A +L L+ G+ + +Y L
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A SLLER+ + +P+ YN L+ +CK V + L + + M +
Sbjct: 536 IDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP+++TY LI G A + ++M+ G PD I+ YC +V +AE
Sbjct: 596 KPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEG 655
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
++ + + D+ +Y + + + G + KR L G P+ H +W
Sbjct: 656 MMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPS--------HPIW 707
Query: 602 KGM 604
+
Sbjct: 708 NNL 710
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 202/421 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K+G I E+ K G P + L+ G + N ++ ++V+ M G
Sbjct: 223 AYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRR 282
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++ + H C+ G +D+ +K+ E+ P + TY +I + R + L+
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLF 342
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P++ TYT +++ +CKE K+ E+ ++ + M+ +GL P +V+YN LI YC+E
Sbjct: 343 NEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEE 402
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++ + +L M N P+ T ++ G+ K + A+ L+ ++ ++ S Y
Sbjct: 403 GRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTY 462
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ +A LL+ + ++G VP Y+ +++LCK + +A L + + +
Sbjct: 463 NSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKE 522
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ IK + Y ALI C G+ EA+SL++ M LP+S LI G C E V +
Sbjct: 523 KGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQE 582
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+++ +K +Y + +GD + + + G P+ T IH
Sbjct: 583 GLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIH 642
Query: 599 S 599
+
Sbjct: 643 T 643
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 202/427 (47%), Gaps = 11/427 (2%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ + ++ F ++ D + PT Y +I+H L N++ M + E+ E + C
Sbjct: 295 CEAGRIDEGISLFKKMRED-DCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRE--RSCE 351
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + ++ A K + ES + + ++ G PS+V+ N L+ G +
Sbjct: 352 PNVHTYTVMVD-------AMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGR 404
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I+ ++ M PN T+N L F K V K L K+ E P LVTYN+
Sbjct: 405 IEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS 464
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI CK G + A+ L ++ ++PD TY+ ++ LCK ++ EA LF+ + +G
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKG 524
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ + V Y LI +CK GK+ E+ SLL M P++ T ++ G KEG++ L
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGL 584
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++V + + GV + Y LI + ++ A + ++ G+ P + Y + +
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C +V +A + M++ + P TY LI + +G + +A +++ ML++G P
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSH 704
Query: 521 QICRVLI 527
I LI
Sbjct: 705 PIWNNLI 711
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 130/295 (44%), Gaps = 15/295 (5%)
Query: 63 DLICSSLKKGDSH--LTLLQNDLKP-LLPHLGAHEISRVLLRCQSDSV-SALTFFNWVKN 118
+LIC K+ H +TLL L+ L P L + S + ++C++ SA + +K
Sbjct: 429 ELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN-SLIHVQCKAGHFDSAYKLLDLLKE 487
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
+ + P Y + + L + + M+ C+L +K+ + + + + D
Sbjct: 488 N-GLVPDQWTYSVFIDTLCKSKR----MEEACDLFNSLKE--KGIKANEVMYTALID--- 537
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G I E+ + P+ + N L+ G+ K + + + E M ++G+ P
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKP 597
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ IL + GD D N ++ G PD+ TY I +YC G + +A +
Sbjct: 598 TVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMM 657
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
M V+PD +TYT L++ + G +A + RM+ G P +N LI+
Sbjct: 658 ARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLIW 712
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 251/579 (43%), Gaps = 71/579 (12%)
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
+S+++L +S S AL +F W + S Y ++H L +F ++L E+
Sbjct: 37 EHVSQLILDQKSAS-EALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEM 95
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI--------RESFKTFRKTLDV----- 199
+ P D+F +I + ++ S K F LDV
Sbjct: 96 PHSL-GAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKED 154
Query: 200 ---------------GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
G + + L+ GL N I + +++ + + G+ PNT +N
Sbjct: 155 IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYN 214
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L H C+NG V + + ++E DP+ VT+N LIS YCK+G A L +
Sbjct: 215 TLLHALCRNGKVGRARNLMNEME----DPNDVTFNILISGYCKEGNSVQALVLLEKSFSM 270
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+PD+V+ T ++ LC G+ EA ++ R+ G D+V+YNTLI +C GK++
Sbjct: 271 GFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVG 330
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
L +M G P+ T +++ G+ + G L AL+L +++ G+ + +D LI
Sbjct: 331 LHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRG 390
Query: 425 LCQDNRPFAATSLLERI--GQDGYVPSLEIYNELMESL---------------------- 460
LC + R S+LE + ++G + YN ++ L
Sbjct: 391 LCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPR 450
Query: 461 -----------CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
CK ++ DA + D+M+D PS+ Y L+ F G EAV LM+
Sbjct: 451 AVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMN 510
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM+ + P +I G+C + V A L+ + + +TE+Y+ + ++ +G
Sbjct: 511 EMIANNCFPIPSTFNAVITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNG 570
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
DL K M++ + + G P+ ++ SL + ER F
Sbjct: 571 DLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQ--ERHF 607
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 272/576 (47%), Gaps = 30/576 (5%)
Query: 52 LPETQNP-NKIVDLICSSLK----KGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDS 106
+P ++ P IV +C+ L KG S +LK L P L AH ++ ++ D+
Sbjct: 37 VPASREPFQAIVSRVCAILSRVQWKGSS-------ELKQLSPQLKAHHVAEIV-AVHKDT 88
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV- 165
S + FF W+ K + + +++ L + F+ A + + ++K C + ++
Sbjct: 89 ESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIR---ILMIKACRNEEEIR 145
Query: 166 ----FQDLISCTE------DCNWAYVKVG---LIRESFKTFRKTLDVGFQPSIVSCNFLL 212
F + IS CN +++ ++ + +++ L+ G QPS+++ N L+
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N L K + + + ++ + + P+ T+ L C+N ++D G +++ +EG D
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ VTY+TLI+ C +GR+++A + M + + P + TYT + LC EA +L
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
RM RG P++ +Y LI + GK++ + L ++M+ G+ P+T T ++
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR +AL + ++ G + Y+ +I LC A L E++ + G +P++
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ +V +A L D M + +P TY L+ F G+ A EM+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G+ P+ LI+G+ + V+ A +LL + + ESYNAV N +++ S
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ ++ + + G PN +T +I L + +F
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 190/375 (50%), Gaps = 4/375 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ F K L +G P++V+ N L+NG L ++ ++ + M G P+ T+
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L F K G ++ + + +++ E G +P+ V+Y LI + K G+++ A L + M
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++ +Y ++NGL KE + EA ++ +MV +GL P++++Y TLI C+ G+ Q
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + ++M P+ +T ++ G +EG+ A + G + D Y L+
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVS 657
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R + A L++ + + G+ P EIY L+ + CK V AL + + + +
Sbjct: 658 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 717
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
LS YRALIC C G+ EA +L D MLE D + VL++G E +++ LL
Sbjct: 718 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 777
Query: 544 GFFAKKFQIYDTESY 558
K + ++Y
Sbjct: 778 HIMESKNFTPNIQTY 792
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 219/485 (45%), Gaps = 15/485 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+PT Y L + L A++++ + + + C +V + LIS V
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKK--RGCRPNVQTYTALISGLSRLGKLEV 356
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+GL + K L G P+ V+ N L+N L +++ M G NT
Sbjct: 357 AIGL-------YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C GD++K EK+ + G P +VTYNTLI+ Y KG +N+A L +M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD TY L++G K GK+ A F MV GL+P+ VSY LI + K+GK+
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ SLL M G P+ + ++ G KE R A + ++ G+ + Y L
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ R A + + + +P+L Y+ L+ LC+ +A + M +
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGC 645
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+L TY L+ C GR EA L+ +M E G PD +I L+ +C +V+ A
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705
Query: 542 LL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ AK FQ++ Y A+ + G + + L L + + + ++ L
Sbjct: 706 IFHSIEAKGFQLH-LSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Query: 601 WKGME 605
K E
Sbjct: 765 LKEGE 769
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 4/406 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G +P++ + + L + ++ ++ M + G PN T+
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + G ++ G K+ +EG P+ VTYN LI+ C GR + A ++ M
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
L + TY ++ GLC G + +A LF +M+ G P +V+YNTLI Y +G +
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M NG PD +T +V G+ K G+L SA E+ G++ + Y LI
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+D + A SLL+R+ + G P++E YN ++ L K + ++A + D+MV++ + P
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP 581
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY LI C GR+ A + +M + LP+ LI G C E ++AE +
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMS 641
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++Y+ + + G + +L K GF P+
Sbjct: 642 EIGCEP----TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 201/419 (47%), Gaps = 14/419 (3%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL F+W++ + T + Y I+ L AM + +++++ P +V +
Sbjct: 391 TALKIFHWMEGHGSLANTQT-YNEIIKGLCLGGDIEKAMVLFEKMLKM-GPLP-TVVTYN 447
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y+ G + + + + G +P + N L++G K ++
Sbjct: 448 TLIN-------GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM G+ PN ++ L K+G VD L+++EE G +P++ +YN +I+ K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ R ++A + M + +LP+++TYTTL++GLC+ G+ + A ++FH M R P++ +
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y++LI+ C+EGK E++ M G P T +V G ++GR A LV +++
Sbjct: 621 YSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMK 676
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G R+IY L++A C++ A + I G+ L IY L+ +LCK V
Sbjct: 677 ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVE 736
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L D M+++ + L+ G + L+ M P+ Q +L
Sbjct: 737 EAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 177/362 (48%), Gaps = 13/362 (3%)
Query: 152 LVELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
L++L+K+ C + +L+S + K G + + F++ ++ G P+ VS
Sbjct: 465 LLDLMKENGCEPDEWTYNELVS-------GFSKWGKLESASFYFQEMVECGLNPNPVSYT 517
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L++G K +D + + M +G PN ++N + + K + +K+ E+
Sbjct: 518 ALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQ 577
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G P+++TY TLI C+ GR AF ++ M +R LP+L TY++L+ GLC+EGK EA
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
RM G P + +Y+TL+ C++G+ E++ L+ +M G PD ++
Sbjct: 638 E----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 693
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ K + AL + ++ G + IY LI ALC+ + A +L + + + +
Sbjct: 694 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 753
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
++ L++ L K + + L M +N P++ TY L IG+S E+ L D
Sbjct: 754 EIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLAD 813
Query: 510 EM 511
++
Sbjct: 814 KL 815
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 135/319 (42%), Gaps = 55/319 (17%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P +Y ++ + + K A+ +L + E+ C +V+ + +I+
Sbjct: 509 LNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM--GCNPNVESYNAVIN-------GLS 559
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K E+ K K ++ G P++++ L++GL + ++++ +M + PN +
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + C+ G D+ E++ E G +P L TY+TL+S C+KGR +A L + M
Sbjct: 620 TYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
R PD L Y L+ LCK G+V
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA LF M+ + + D + + L+ KEG++ LL+ M P+
Sbjct: 736 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPN------- 788
Query: 387 VQGYGKEGRLLSALNLVVE 405
+Q Y GR LS + +E
Sbjct: 789 IQTYVILGRELSRIGKSIE 807
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ L N + FA K+ ++ + + C ++ + LI + +
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEK--RKCLPNLYTYSSLI-------YGLCQE 631
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ + ++G +P++ + + L++GL + + Q+ ++M G CP+ +
Sbjct: 632 GKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 687
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L CKN +VD IE +GF L Y LI + CK G++ +A L+ M
Sbjct: 688 YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 747
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ D + +T L++GL KEG++ +L H M + +P+I +Y L + GK E
Sbjct: 748 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIE 807
Query: 364 SKSL 367
S+ L
Sbjct: 808 SEPL 811
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 272/576 (47%), Gaps = 30/576 (5%)
Query: 52 LPETQNP-NKIVDLICSSLK----KGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDS 106
+P ++ P IV +C+ L KG S +LK L P L AH ++ ++ D+
Sbjct: 37 VPASREPFQAIVSRVCAILSRVQWKGSS-------ELKQLSPQLKAHHVAEIV-AVHKDT 88
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV- 165
S + FF W+ K + + +++ L + F+ A + + ++K C + ++
Sbjct: 89 ESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIR---ILMIKACRNEEEIR 145
Query: 166 ----FQDLISCTE------DCNWAYVKVG---LIRESFKTFRKTLDVGFQPSIVSCNFLL 212
F + IS CN +++ ++ + +++ L+ G QPS+++ N L+
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N L K + + + ++ + + P+ T+ L C+N ++D G +++ +EG D
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ VTY+TLI+ C +GR+++A + M + + P + TYT + LC EA +L
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 325
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
RM RG P++ +Y LI + GK++ + L ++M+ G+ P+T T ++
Sbjct: 326 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR +AL + ++ G + Y+ +I LC A L E++ + G +P++
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ +V +A L D M + +P TY L+ F G+ A EM+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G+ P+ LI+G+ + V+ A +LL + + ESYNAV N +++ S
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ ++ + + G PN +T +I L + +F
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 204/419 (48%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G +P++ + + L + ++ ++ M + G PN T+
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 341
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + G ++ G K+ +EG P+ VTYN LI+ C GR + A ++ M
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
L + TY ++ GLC G + +A LF +M+ G P +V+YNTLI Y +G +
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M NG PD +T +V G+ K G+L SA E+ G++ + Y LI
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALID 521
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+D + A SLL+R+ + G P++E YN ++ L K + ++A + D+MV++ + P
Sbjct: 522 GHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLP 581
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY LI C GR+ A + +M + LP+ LI G C E ++AE LL
Sbjct: 582 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 641
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K D ++ ++ + F G + L +R + +G PN T ++ L K
Sbjct: 642 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 191/408 (46%), Gaps = 9/408 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+PT Y L + L A++++ + + + C +V + LIS V
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKK--RGCRPNVQTYTALISGLSRLGKLEV 356
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+GL + K L G P+ V+ N L+N L +++ M G NT
Sbjct: 357 AIGL-------YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C GD++K EK+ + G P +VTYNTLI+ Y KG +N+A L +M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD TY L++G K GK+ A F MV GL+P+ VSY LI + K+GK+
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ SLL M G P+ + ++ G KE R A + ++ G+ + Y L
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ R A + + + +P+L Y+ L+ LC+ +A +L EM + +
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P T+ +LI F +GR A L+ M++ G P+ + VL+ G
Sbjct: 650 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 164/321 (51%), Gaps = 10/321 (3%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL F+W++ + T + Y I+ L AM + +++++ P +V +
Sbjct: 391 TALKIFHWMEGHGSLANTQT-YNEIIKGLCLGGDIEKAMVLFEKMLKM-GPLP-TVVTYN 447
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y+ G + + + + G +P + N L++G K ++
Sbjct: 448 TLIN-------GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFY 500
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM G+ PN ++ L K+G VD L+++EE G +P++ +YN +I+ K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ R ++A + M + +LP+++TYTTL++GLC+ G+ + A ++FH M R P++ +
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y++LI+ C+EGK E++ LL EM G+ PD T ++ G+ GR+ A L+ +
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Query: 408 RFGVSISRDIYDYLIVALCQD 428
G + Y L+ L ++
Sbjct: 681 DMGCKPNYRTYSVLLKGLQKE 701
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 130/250 (52%), Gaps = 9/250 (3%)
Query: 150 CELVELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
L++L+K+ C + +L+S + K G + + F++ ++ G P+ VS
Sbjct: 463 ARLLDLMKENGCEPDEWTYNELVS-------GFSKWGKLESASFYFQEMVECGLNPNPVS 515
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
L++G K +D + + M +G PN ++N + + K + +K+
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E+G P+++TY TLI C+ GR AF ++ M +R LP+L TY++L+ GLC+EGK
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L M +GL+PD V++ +LI + G++ + LL M+ G P+ T +++
Sbjct: 636 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLL 695
Query: 388 QGYGKEGRLL 397
+G KE LL
Sbjct: 696 KGLQKECLLL 705
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 8/208 (3%)
Query: 166 FQDLISCTEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
FQ+++ C + N + K G + + ++ ++G P++ S N ++NGL K
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSK 560
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
N + ++ ++M G+ PN T+ L C+NG +E+ P+L T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y++LI C++G+ ++A L + M R+ + PD VT+T+L++G G++ A L RMV
Sbjct: 621 YSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESK 365
G P+ +Y+ L+ KE + E K
Sbjct: 681 DMGCKPNYRTYSVLLKGLQKECLLLEEK 708
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 185/362 (51%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L+NGL K+ +Q+ +EM + PN +N++ FCK+ K KI + G
Sbjct: 195 LINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMG 254
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
DPD++TY +LI +C+ G+ + L M +N+ P++ T+ L++ C++GK+ EA
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+F+ MV RG PDIV++NTLI +C G + E++ L + GI PD ++ I++ GY
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K R+ A++L E++ + + +Y LI LC+ R A L I DG P++
Sbjct: 375 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNV 434
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+++ CK + + L M + + P++ TY LI +C R EA++L+
Sbjct: 435 ITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSV 494
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M + PDS L +G C ++ A L D +YN + + F + D
Sbjct: 495 MQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554
Query: 571 LS 572
++
Sbjct: 555 VA 556
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 228/504 (45%), Gaps = 17/504 (3%)
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
H+ R C + L+ FN + + + + N + ++ +N +KM
Sbjct: 42 HKFLRFFSHCPKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKM---- 97
Query: 153 VELVKDCPHSVDVFQDLI------SCTEDCNW--AYVKVGLIRESFKTFRKTLDVGFQPS 204
K CP ++ + + ++ S W Y +G + +F L G+QP+
Sbjct: 98 ----KHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPN 153
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
++ ++ GL + + ++ + G+ + + L + CK G L+
Sbjct: 154 NITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQ 213
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E + P++V YN +I S+CK A LY + + PD++TYT+L+ G C+ G
Sbjct: 214 EMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG 273
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ E QL MV++ ++P++ ++N LI A+C++GKM E++ + M+ G PD T
Sbjct: 274 QWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 333
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ G +L A L + G+ Y LI+ C+ R A SL +
Sbjct: 334 TLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCK 393
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
V + +Y+ L++ LCK ++ A L + + P++ TY LI FC I
Sbjct: 394 NMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMG 453
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L M G+ P +LINGYC K + +A LL K D+ +YN++F+
Sbjct: 454 IELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 513
Query: 565 FAEDGDLSKLMELQKRFLRLGFAP 588
+ G +S EL K + +G P
Sbjct: 514 LCKSGRISDAWELFK-VMHVGGPP 536
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 35/310 (11%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
+ K +D+G P I++ L+ G + + Q+ EM I PN +TFN+L FC+
Sbjct: 247 YLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD--- 309
G + + G + + G PD+VT+NTLIS +C G + +A L+ ++ R +LPD
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366
Query: 310 --------------------------------LVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+V Y++L++GLCK G++ A +LF +
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTIN 426
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ G P++++YN LI A+CK + L M G G+ P T I++ GY K R+
Sbjct: 427 NDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIR 486
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A+NL+ +Q ++ Y+ L LC+ R A L + + G + YN L+
Sbjct: 487 EAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 546
Query: 458 ESLCKCDSVA 467
++ CK VA
Sbjct: 547 DAFCKAQDVA 556
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 149/309 (48%), Gaps = 9/309 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D+ I P Y ++ ++ +++CE+V K+ +V F LI
Sbjct: 252 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVN--KNINPNVYTFNVLID------- 302
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + G + E+ F + G QP IV+ N L++G + + ++++ + GI P
Sbjct: 303 AFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILP 362
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++ IL +CK +D+ ++ + D+V Y++LI CK GR++ A+ L+
Sbjct: 363 DVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELF 422
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ P+++TY L++ CK + +LF M +GL+P +++YN LI YCK
Sbjct: 423 STINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKS 482
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++E+ +LL M + PD+ T + G K GR+ A L + G + Y
Sbjct: 483 KRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATY 542
Query: 419 DYLIVALCQ 427
+ L+ A C+
Sbjct: 543 NVLLDAFCK 551
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K IRE+ P ++ N L +GL K I W++++ M G
Sbjct: 478 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 537
Query: 239 NTHTFNILTHVFCKNGDV 256
+ T+N+L FCK DV
Sbjct: 538 DVATYNVLLDAFCKAQDV 555
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 219/482 (45%), Gaps = 9/482 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P + ++ L + A+ ML E+ S DV D + T +V
Sbjct: 192 IEPDVVTFNTVIDALCRARQARTAVLMLEEM--------SSCDVAPDETTFTT-LMEGFV 242
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I + + + ++G P+ V+ N L+NG KL + ++ G P+
Sbjct: 243 EEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRV 302
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF+ + C+NG VD L + +EG +PD+ TY+T+I+ C G L +A + M
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LPD T+ TL+ LC E ++ EA L + +GLSP++ ++N LI A CK G
Sbjct: 363 VDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDP 422
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM +G PD T I++ G+L AL+L+ E++ G S Y+ +
Sbjct: 423 HLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTI 482
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A + +++ G + +N L++ LC + + DA L D+M+ +
Sbjct: 483 IDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGL 542
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ TY +++ +C G +A ++ M +G D LING C + A
Sbjct: 543 QPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALK 602
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL K ++YN V + + L + +G P+ T K + L
Sbjct: 603 LLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLC 662
Query: 602 KG 603
+G
Sbjct: 663 RG 664
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/601 (24%), Positives = 270/601 (44%), Gaps = 41/601 (6%)
Query: 29 SSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLP 88
+ + L+ SE + L L E +P + ++ S+L + D LT ++ + ++
Sbjct: 44 ARFQLKFAAGSEQERLVTALR----EQADPEAALRMLNSALAR-DDGLTPSRDVYEEIIR 98
Query: 89 HLG------------------AHEISRVLLRCQSDSVSALTFFN----WVKNDLEIKPTS 126
LG HE+ L++ S + L F+ V N L++
Sbjct: 99 KLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQ 158
Query: 127 SN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
+N Y ++ +LA +K E+ + V F +I A V
Sbjct: 159 ANTEVYNHLLTVLAEGSKIKLLESAYTEMSS--QGIEPDVVTFNTVIDALCRARQARTAV 216
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
++ E + DV P + L+ G ++ I+ ++ M +G P + T
Sbjct: 217 LMLEE-----MSSCDVA--PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTV 269
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L + +CK G V G++++ +GF+PD VT++T ++ C+ G ++ A + +M +
Sbjct: 270 NVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQ 329
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD+ TY+T++N LC G++ EA + ++MV G PD ++NTLI A C E +++E
Sbjct: 330 EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEE 389
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L E+ G+ P+ +T I++ K G A+ L E++ G + Y+ LI
Sbjct: 390 ALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILID 449
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC + A LL+ + G S YN +++ LCK + +A + D+M I
Sbjct: 450 NLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGR 509
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ LI C R +A L+D+M+ G+ P++ ++ YC + +++KA +L
Sbjct: 510 NAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADIL 569
Query: 544 -GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A F++ D +Y + N + ++L + G P +I SL++
Sbjct: 570 QTMTANGFEV-DVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFR 628
Query: 603 G 603
G
Sbjct: 629 G 629
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 144/280 (51%), Gaps = 17/280 (6%)
Query: 142 FSFAMKMLCELVELVKDCPH-SVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLD 198
F+ + LC++ + PH +V +F+++ S CT D + + + S K K LD
Sbjct: 409 FNILINALCKVGD-----PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK-LAKALD 462
Query: 199 V-------GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
+ G S V+ N +++GL K I++ +V+++M GI N TFN L C
Sbjct: 463 LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLC 522
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+D ++++ EG P+ VTYN++++ YCK+G ++ A + + M D+V
Sbjct: 523 NAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVV 582
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY TL+NGLCK + + A +L M +G+ P +YN +I + + +++ SL EM
Sbjct: 583 TYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREM 642
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGR-LLSALNLVVELQRFG 410
G PD FT +I+ +G + G + A + +VE+ G
Sbjct: 643 TEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNG 682
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 147/340 (43%), Gaps = 14/340 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P ++ + ++ L N+ A+ + EL VK +V F LI+ A KV
Sbjct: 369 PDTTTFNTLIVALCTENQLEEALDLARELT--VKGLSPNVYTFNILIN-------ALCKV 419
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + F + G P V+ N L++ L + + + +EM G +T T+
Sbjct: 420 GDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTY 479
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK +++ ++++ G + +T+NTLI C R++DA L M
Sbjct: 480 NTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMIS 539
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P+ VTY +++ CK+G + +A + M G D+V+Y TLI CK + Q
Sbjct: 540 EGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQA 599
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGY--GKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL M G+ P ++Q G GR AL+L E+ G Y +
Sbjct: 600 ALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGR--DALSLFREMTEVGGPPDAFTYKIV 657
Query: 422 IVALCQDNRPFA-ATSLLERIGQDGYVPSLEIYNELMESL 460
LC+ P A L + +G++P + L E L
Sbjct: 658 FRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 194/384 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ + + GF V+ L+NGL K+ + +++ +M + PN +
Sbjct: 162 GEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIY 221
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N++ CK+G V + + G DPD+ TY LI +C G+ + L M
Sbjct: 222 NMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD 281
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
RNV ++ TY L++ LCK+G + +AH + + M+ RG PD+V++NTL+ YC + E
Sbjct: 282 RNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVE 341
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ L GI PD ++ I++ GY K R+ AL+L ++ ++ + Y LI
Sbjct: 342 ARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLID 401
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R A L I G P++ YN ++++LCK V A+ L + M +R + P
Sbjct: 402 GLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTP 461
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++S+Y LI +C R EA++L +EM ++PDS LI+G C ++ A L
Sbjct: 462 NVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF 521
Query: 544 GFFAKKFQIYDTESYNAVFNMFAE 567
D +YN +F+ F++
Sbjct: 522 NVMHDGGPPVDVITYNILFDAFSK 545
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 195/413 (47%), Gaps = 35/413 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G PSIV+ + L+N L + + V + + G N T + C NG+V K
Sbjct: 108 GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKA 167
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F + + +GF D VTY TLI+ CK G +AF L M + V P++V Y +++G
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDG 227
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+G V EA L+ +V RG+ PD+ +Y LI +C G+ +E LL +M+ + +
Sbjct: 228 LCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLN 287
Query: 380 TFTCQIIVQGYGKEGRLLSA----------------------------LNLVVELQRF-- 409
+T I++ K+G L A N VVE ++
Sbjct: 288 VYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFD 347
Query: 410 ---GVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
I+ D++ Y LI+ C++NR A SL ++ P++ Y+ L++ LCK
Sbjct: 348 TFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSG 407
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ A L + D P++ TY ++ C I +A+ L + M E G+ P+
Sbjct: 408 RISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYN 467
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+LINGYC K +++A L ++ + D+ +YN + + + G +S EL
Sbjct: 468 ILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWEL 520
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 191/404 (47%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F + + + PS+V N +L ++K+ + ++MG GI P+ T +I
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + +C G + L + + G+ + +T T++ C G + A + + +
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
L D VTY TL+NGLCK G REA +L H+M + + P++V YN ++ CK+G + E++
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L +++G GI PD FT ++ G+ G+ L+ ++ V+++ Y+ LI AL
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ A + + + G P L +N LM C + V +A L D + I P +
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+Y LI +C R EA+SL ++M + P+ LI+G C ++ A L
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ +YN + + + + K +EL G PN
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPN 462
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 156/306 (50%), Gaps = 9/306 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++H ++ ++LC++V+ ++ +V + LI A
Sbjct: 249 IDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVD--RNVNLNVYTYNILID-------ALC 299
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ ++ ++ G +P +V+ N L++G N + + ++++ GI P+
Sbjct: 300 KKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVW 359
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++NIL +CKN +D+ K+ + P++VTY++LI CK GR++ A+ L+ +
Sbjct: 360 SYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAI 419
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+++TY +++ LCK V +A +LF+ M RGL+P++ SYN LI YCK ++
Sbjct: 420 HDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRI 479
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM + PD+ T ++ G K GR+ A L + G + Y+ L
Sbjct: 480 DEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539
Query: 422 IVALCQ 427
A +
Sbjct: 540 FDAFSK 545
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 160/352 (45%), Gaps = 35/352 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP--- 238
K+GL RE+F+ K +P++V N +++GL K + + +Y ++ GI P
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254
Query: 239 --------------------------------NTHTFNILTHVFCKNGDVDKVNGFLEKI 266
N +T+NIL CK G + K + +
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E G PDLVT+NTL+S YC + +A L+ + PD+ +Y L+ G CK ++
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRI 374
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA LF++M ++ L+P+IV+Y++LI CK G++ + L + G P+ T I+
Sbjct: 375 DEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIM 434
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ K + A+ L + G++ + Y+ LI C+ R A +L E + +
Sbjct: 435 LDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNL 494
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
VP YN L++ LCK ++ A L + M D + TY L F I
Sbjct: 495 VPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKI 546
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 140/288 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ +G RE + +D ++ + N L++ L K + + + M G P
Sbjct: 262 GFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRP 321
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN L +C DV + + E G PD+ +YN LI YCK R+++A L+
Sbjct: 322 DLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLF 381
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P++VTY++L++GLCK G++ A +LF + G SP++++YN ++ A CK
Sbjct: 382 NKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKI 441
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ ++ L M G+ P+ + I++ GY K R+ A+NL E+ R + Y
Sbjct: 442 QLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTY 501
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ LI LC+ R A L + G + YN L ++ K V
Sbjct: 502 NCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+++ + AL+ FN + N ++ P Y ++ L + + S+A EL + D
Sbjct: 369 CKNNRIDEALSLFNKM-NYKKLAPNIVTYSSLIDGLCKSGRISYAW----ELFSAIHDGG 423
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S +V I C K+ L+ ++ + F + G P++ S N L+NG K
Sbjct: 424 PSPNVITYNIMLDALC-----KIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID+ ++EEM R + P++ T+N L CK+G + + + G D++TYN
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538
Query: 281 LISSYCK 287
L ++ K
Sbjct: 539 LFDAFSK 545
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
D++ DA+ L ++ + PS+ + ++ + A+SL +M G+ P
Sbjct: 57 DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+LIN YC + A ++LG K+ + + + +G++ K +E +
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176
Query: 584 LGFAPNNLTCKYMIHSLWK-GMERK 607
GF + +T +I+ L K G+ R+
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTRE 201
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 3/425 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E K + + G P +++C L+ G + + ++ E + G P+
Sbjct: 117 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDV 176
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L +CK+G++DK LE +E PD+VTYNT++ S C G+L +A +
Sbjct: 177 ITYNVLIGGYCKSGEIDKA---LEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 233
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+R PD++TYT L+ C + V +A +L M +G PD+V+YN LI CKEG+
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 293
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L M G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 294 LDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNI 353
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ + G VP+ YN L+ C+ + A+ + MV R
Sbjct: 354 LINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 413
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY L+ C G+ AV +++++ G P +I+G A
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAV 473
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL +K D +Y+ + +G + + +++ L P+ +T ++ L
Sbjct: 474 ELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Query: 601 WKGME 605
K +
Sbjct: 534 CKAQQ 538
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 189/396 (47%), Gaps = 3/396 (0%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L L++ +++ + E M G P+ L FC++G K +E +
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEIL 167
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E G PD++TYN LI YCK G ++ A ++ R +V PD+VTY T++ LC GK+
Sbjct: 168 ENSGAVPDVITYNVLIGGYCKSGEIDKAL---EVLERMSVAPDVVTYNTILRSLCDSGKL 224
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+EA ++ R + R PD+++Y LI A C + + ++ LL EM G PD T ++
Sbjct: 225 KEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 284
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G KEGRL A+ + + +G + ++ ++ ++C R A LL + + G
Sbjct: 285 INGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGC 344
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
PS+ +N L+ LC+ + A+ + ++M P+ +Y L+ FC + A+
Sbjct: 345 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIE 404
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ M+ G PD L+ C + V+ A +L + K +YN V +
Sbjct: 405 YLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLT 464
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G +EL + R G P+ +T ++ L +
Sbjct: 465 KVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGR 500
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 172/346 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + + L P +++ L+ + + Q ++ +EM + G P+ T+
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L + CK G +D+ FL + G P+++T+N ++ S C GR DA L M R
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P +VT+ L+N LC++ + A + +M G P+ +SYN L+ +C+E KM
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ G YPD T ++ K+G++ +A+ ++ +L G S Y+ +I
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
L + + A LLE + + G P + Y+ L+ L + V +A+ + +M +IKP
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKP 521
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
S TY A++ C ++ A+ + M+E G P +LI G
Sbjct: 522 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 170/340 (50%), Gaps = 9/340 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E P Y +++ ++ AMK+L E+ + K C V + LI+
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK--KGCKPDVVTYNVLIN-------GI 288
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + E+ K G +P++++ N +L + ++ +M R G P+
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
TFNIL + C+ + + LEK+ + G P+ ++YN L+ +C++ +++ A I
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R PD+VTY TL+ LCK+GKV A ++ +++ +G SP +++YNT+I K GK
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + LL EM G+ PD T +++G G+EG++ A+ + +++ + S Y+
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNA 528
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+++ LC+ + A L + + G P+ Y L+E +
Sbjct: 529 IMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 197/404 (48%), Gaps = 38/404 (9%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + G P++V+ N ++ G + +D+ E+M G P+ T+ L
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM------ 301
FCK+ DV + L ++ GF PD+VTY+T+I CK GRL DA ++ M
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTA 246
Query: 302 ---------YRR-----------------NVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
Y R PD+VTYTTLM+ CK G++ +A++LF +
Sbjct: 247 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
MV LSPD+V++ +L+ C EG+M+++ LL E+ G P +T +V GY K +
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV--PSLEIY 453
+ A LV + + G + Y+ L+ C+ R A L+++ +G S+ +Y
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 426
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
++++LC+ DA+ +EM+ R P+ +T+ ++ C + +A L++EM++
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G P C +++ YC + KA+ L A + ++Y +S
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQKADEL----ASELRLYTDKS 526
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 230/489 (47%), Gaps = 19/489 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVEL--VKDCPHSVDVFQDLISCTEDCNWAYV 181
P Y +VH L+ + A+++L E+V V D V Q L C D
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL--CLGD------ 88
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ ++ + + L G + ++ + L++GL K +D+ + E M G P
Sbjct: 89 ---RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVV 145
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + FC+ VD+ +GF+E++ EG PD++TY LI +CK + L +
Sbjct: 146 TYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEV 205
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RR PD+VTY+T+++GLCK G++R+A +F M +P ++YN+LI YC+ G M
Sbjct: 206 TRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDM 262
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ LL +M+ + PD T ++ + K GRL A L ++ +S + L
Sbjct: 263 DEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSL 322
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC + R A LLE I + G P++ YN +++ CK + V A L + R
Sbjct: 323 VDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGF 382
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEM-LESGMLPDS-QICRVLINGYCMEKDVNKA 539
P+ TY L+ C GR+ +A+ +D++ E G P S + ++++ C + + A
Sbjct: 383 VPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDA 442
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ + ++ V + + EL + ++ G P TC ++ +
Sbjct: 443 VQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 502
Query: 600 LWK-GMERK 607
+ GM +K
Sbjct: 503 YCRAGMIQK 511
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 179/378 (47%), Gaps = 4/378 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G +R + +R+ D P ++ L++GL K + QV +EM P+
Sbjct: 17 RAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNT 75
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T ++ C VD +E++ G + +TY+ L+ CK RL++A L M
Sbjct: 76 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETM 135
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R P +VTY +++ G C+ +V EAH +MV G PDI++Y LI +CK +
Sbjct: 136 AERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDV 195
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
LL E+ G PD T ++ G K GRL A+++ E+ +I+ Y+ L
Sbjct: 196 GRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAIT---YNSL 252
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ A LL ++ D P + Y LM + CK + DA L +MV +
Sbjct: 253 IGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + T+ +L+ CG GR +A+ L++E+ G P +++GYC V KAE
Sbjct: 313 SPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEE 372
Query: 542 LLGFFAKKFQIYDTESYN 559
L+ F + + +T +YN
Sbjct: 373 LVADFRSRGFVPNTVTYN 390
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 154/330 (46%), Gaps = 4/330 (1%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+P + +N +I C+ GRL A +YR M + PD +TYT L++GL K ++R+A
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAV 59
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
Q+ MV PD + ++ + C ++ +++ L+ EM+ G+ + T +V G
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K RL A+ LV + G + + Y+ +I C+ R A +E++ +G P +
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L+ CK V L L E+ R P + TY +I C GR +AV + +E
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M P + LI GYC D+++A LLG D +Y + + F + G
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L EL ++ + +P+ +T ++ L
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGL 326
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 143/294 (48%), Gaps = 11/294 (3%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
++ PT+ Y ++ A+++L ++V+ C V + L+S
Sbjct: 238 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD--DKCAPDVVTYTTLMS------ 289
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A+ K+G + ++++ F++ + P +V+ L++GL ++ ++ EE+ R G
Sbjct: 290 -AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-Y 296
P +T+N + +CK V K + GF P+ VTYN L++ C+ GR + A Y
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 408
Query: 297 LYRIMYRRNVLPDLVT-YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L ++ P V Y +++ LC++G+ +A Q + M+ RG P ++ T++FA
Sbjct: 409 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
CK + Q++ LL EM+ G P TC +V Y + G + A L EL+ +
Sbjct: 469 CKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 84/186 (45%), Gaps = 1/186 (0%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+++ +I LC+ R A + ++ D + P Y +L+ L K + DA+ + EM
Sbjct: 7 LHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEM 65
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V P +T ++ C R +A L++EML GM ++ L++G C + +
Sbjct: 66 VSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERL 125
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A AL+ A++ +YN++ F + + ++ + G P+ +T +
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185
Query: 597 IHSLWK 602
I K
Sbjct: 186 IGGFCK 191
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 146/612 (23%), Positives = 271/612 (44%), Gaps = 54/612 (8%)
Query: 39 SEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRV 98
++H + L++ + PN V I L+ + L + + L L H++ ++
Sbjct: 27 TKHSVSAAKLHDESADASIPNDAVRQILIGLRSFGASKFLWGHHFQTLASVLNTHQVDQI 86
Query: 99 LLRCQSD-SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
LL + D S SAL F+ ++N+ + + ++ ++ H++A + ++L ++VE +
Sbjct: 87 LLSLRVDNSDSALFLFDLLRNEYGFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVE--E 144
Query: 158 DCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTFRKTLDVGFQPSI 205
+ S +L+ C +W AY + ++ ++ K + Q SI
Sbjct: 145 EGSGSAPSLCELL-CNSFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSI 203
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+ N LL L D W VY E+ G+ N +T IL C+ + FL +
Sbjct: 204 ATYNSLL---YNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRE 260
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
E F P +V++N L+S +CK G ++ A + +M + +LPD+ +Y L++GLC G
Sbjct: 261 TGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGS 320
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA + + M + G+ PDIV+YN L + G + + ++ M+ NG+ PD T I
Sbjct: 321 MEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTI 380
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G+ + G + + L ++ G+ +S Y L+ +LC+ R A LL + G
Sbjct: 381 LICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIG 440
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS--------------------- 484
P L Y+ L+ LCK +V +A+ L +EM + I P+
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 500
Query: 485 --------------LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ Y +I + +G GEAV +++E G+ P LI G+
Sbjct: 501 MYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGF 560
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C + + +A LL + + +Y + N + E+GD+ + ++ P
Sbjct: 561 CKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQ 620
Query: 591 LTCKYMIHSLWK 602
+T ++ L K
Sbjct: 621 ITYTVVVKGLCK 632
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 35/450 (7%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++++ R+T F PS+VS N L++G K+ +D + M + G+ P+ +++NI
Sbjct: 251 LQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNI 310
Query: 246 LTHVFCKNGDVDKV-----------------------NGF------------LEKIEEEG 270
L H C G +++ NGF ++++ G
Sbjct: 311 LLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNG 370
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+PDLVTY LI +C+ G + ++F L M + + +VTYT L++ LCK G++ EA
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L H M GL PD+++Y+ LI CK G ++E+ L EM IYP++F C I+ G
Sbjct: 431 ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
++G + A + + V+ +Y+ +I + A ++I + G P++
Sbjct: 491 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 550
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+N L+ CK +A+A+ L D + + P+ TY L+ +C G ++ E
Sbjct: 551 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 610
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M + P V++ G C E ++++ LL + + D +YN V F + D
Sbjct: 611 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHD 670
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K +L + L+ P+ +T +I+ L
Sbjct: 671 LQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 211/424 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ ++G I ESFK K L G + SIV+ LL+ L K ID+ + EM IG+ P
Sbjct: 384 GHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKP 443
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+++L H CK G V++ E++ + P+ + +IS +KG +++A +
Sbjct: 444 DLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF 503
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + +V +++ Y +++G K G + EA + + +++ +G+SP IV++N+LI+ +CK+
Sbjct: 504 DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKK 563
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ E+ LL + +G+ P + T ++ GY +EG + S +++ E++ + ++ Y
Sbjct: 564 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY 623
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ LC++ R + LL+ + G P YN +++S CK + A L ++M+
Sbjct: 624 TVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQ 683
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++PS TY LI C G +A L+ + + + +I +C + DV
Sbjct: 684 HSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQN 743
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ Y+AV N + ++ L G P+ C M++
Sbjct: 744 ALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLN 803
Query: 599 SLWK 602
+ +
Sbjct: 804 AFHR 807
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 173/367 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + + + P+ C+ +++GL + I + ++ + + +
Sbjct: 457 KRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEII 516
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+NI+ + K G++ + ++I E+G P +VT+N+LI +CKKG+L +A L +
Sbjct: 517 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 576
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++P VTYTTLMNG C+EG + + H M + + P ++Y ++ CKEG++
Sbjct: 577 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 636
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
ES LL M G++PD T ++Q + K L A L ++ + + S Y+ L
Sbjct: 637 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 696
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC A LL + + Y ++++ C V +AL+ +MV+R
Sbjct: 697 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 756
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ S+ Y A+I C +A ML G+ PD IC V++N + D N
Sbjct: 757 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 816
Query: 542 LLGFFAK 548
+ K
Sbjct: 817 IFAMMIK 823
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 188/397 (47%), Gaps = 9/397 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y +++H L A+++ E+ S ++ + C+ + +
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMC--------SKRIYPNSFVCSAIISGLFE 492
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I E+ F I+ N +++G KL I + + Y+++ GI P
Sbjct: 493 K-GAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIV 551
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L + FCK G + + L+ I+ G P VTY TL++ YC++G ++ F + M
Sbjct: 552 TFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEM 611
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P +TYT ++ GLCKEG++ E+ QL M RGL PD ++YNT+I ++CK +
Sbjct: 612 EAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDL 671
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q++ L +M+ + + P T +++ G G L A L+V LQ + +++ Y +
Sbjct: 672 QKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTI 731
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A C A ++ + G+ S+ Y+ ++ LCK + + DA M+ I
Sbjct: 732 IKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGI 791
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
P ++ F G + M++ G+LP
Sbjct: 792 PPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 216/436 (49%), Gaps = 7/436 (1%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI+C + ++GLI +F K L +G++P ++ N + G I Q
Sbjct: 108 FNILINC-------FCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQAL 160
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++++ +G + ++ L + CK G+ L +++ + D+V Y+T+I S
Sbjct: 161 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSM 220
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK +NDAF LY M R + ++VTY+ L++G C GK+++A LF++M ++PD+
Sbjct: 221 CKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDV 280
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++N L+ A+CKEG+++E+K+ L MM GI PD T ++ GY + A +++
Sbjct: 281 YTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNT 340
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ GV+ + Y+ +I C+ A L + + P++ YN L++ LCK
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
++ AL L D M DR +P + TY +++ C +A++L+ ++ + G+ P+ +
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI+G C + A + K +Y + F G + + L +
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520
Query: 586 FAPNNLTCKYMIHSLW 601
P+ +T + +I SL+
Sbjct: 521 CIPDAITYEIIICSLF 536
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 179/351 (50%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F+K G +P+ V+ N L+N +L I + V ++ ++G P+T T N FC
Sbjct: 93 FQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCL 152
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + F +K+ GF D V+Y TLI+ CK G A L R + + V D+V
Sbjct: 153 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y+T+++ +CK+ V +A L+ MV R +S +IV+Y+ LI +C GK++++ L +M
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I PD +T I+V + KEGR+ A N + + + G+ Y+ L+ C N
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A S+L + G ++ YN ++ CK V A+ L EM + I P++ TY +LI
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
C GR A+ L+D M + G PD +++ C V+KA ALL
Sbjct: 393 DGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALL 443
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 164/332 (49%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++F + + + +IV+ + L++G + + ++ +M I P+ +TFNI
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L FCK G V + L + ++G PD+VTYN+L+ YC +N A + M R
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V + +Y ++NG CK V +A +LF M H+ + P++++YN+LI CK G++ +
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L+ M G PD T I+ K + A+ L+++L+ G+ + Y LI L
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ R A ++ E + GY ++ Y +++ C +AL L +M D + P
Sbjct: 466 CKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGML 517
TY +IC + +A L+ EM+ G+L
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 39/347 (11%)
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
DA L+ + R+N P + + ++ L K LF +M +RG+ P+ V++N LI
Sbjct: 53 DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+C+ G + + S+L +++ G PDT T ++G+ +G++ ALN +L G
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI--YNELMESLCKCDSVADAL 470
+ + Y LI LC+ AA LL R+ DG + L++ Y+ +++S+CK +V DA
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRV--DGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM------------------- 511
L EMV R I ++ TY ALI FC +G+ +A+ L ++M
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290
Query: 512 ----------------LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
++ G+ PD L++GYC+ +VN A+++L + +
Sbjct: 291 CKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATV 350
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
SYN V N F + + + M+L K PN +T +I L K
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCK 397
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 155/354 (43%), Gaps = 49/354 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+ ++ ++ K F++ P++++ N L++GL K I ++ + M G P
Sbjct: 359 GFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQP 418
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ + CKN VDK L K++++G P++ TY LI CK GRL DA ++
Sbjct: 419 DIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIF 478
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + TYT ++ G C G EA L +M PD ++Y +I + +
Sbjct: 479 EDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDK 538
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +++ LL EM+ G+ YG +L+ + F +
Sbjct: 539 DENDKAEKLLREMITRGLLYSFLE-------YGSW-----SLSFMAAPAHFLNN------ 580
Query: 419 DYLIVALCQDNRPFAATSLLERI------------GQDGYVPSLEIYNELMESLCKCDSV 466
D L Q++ +A LLERI +D PS+ IY+ CD
Sbjct: 581 DSLQCTSSQESGNWAKL-LLERIYCDCVLTKSNMRDKDVECPSVIIYST-------CDWS 632
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+L ++TY +I FC G E+++L+ +M +G +PD+
Sbjct: 633 KQGYIL-----------DVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDA 675
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 2/205 (0%)
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
+KM+ + ++L K+ H +F ++I+ + K G I + + D G QP I
Sbjct: 363 IKMVDQAMKLFKEMHHK-QIFPNVITYNSLID-GLCKSGRISYALELIDLMHDRGQQPDI 420
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++ + +L+ L K + +D+ + ++ GI PN +T+ IL CK G ++ E
Sbjct: 421 ITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFED 480
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ +G++ + TY +I +C G ++A L M + +PD +TY ++ L + +
Sbjct: 481 LLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDE 540
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNT 350
+A +L M+ RGL + Y +
Sbjct: 541 NDKAEKLLREMITRGLLYSFLEYGS 565
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 235/512 (45%), Gaps = 26/512 (5%)
Query: 84 KPLLPHLGAHEISRVLLRCQS---DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
K L P + A ++ L R S + +AL FF W+ + T+ ++ ++H+L+
Sbjct: 46 KRLAPSVTAAHVAD-LFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLS--- 101
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
+ P ++ L+ +C+ + + ++ + R+T
Sbjct: 102 ---------------RRRAPAQ---YERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSAR 143
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
S NF L L + + + +VY ++ + G+ P+T T+N + +CK GD+ +
Sbjct: 144 LALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAH 203
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ + E G +P+ T N L+ YC+ G L A +L+ +M + +YT L+ GL
Sbjct: 204 RYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGL 263
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C VR+A LF M G SP++ ++ LI CK G++ +++ L M NG+ P
Sbjct: 264 CDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSV 323
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ GY K GR+ AL + +++ G Y+ LI LC D + A LL
Sbjct: 324 MTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNN 382
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
++G+ P++ + L+ C + DAL +K++M+ K L + LI R
Sbjct: 383 AVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDR 442
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L++E+ +G++P+ +I+GYC V+ A +L + + +YN+
Sbjct: 443 LKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNS 502
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ +D L K M L + + G PN +T
Sbjct: 503 LMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 189/405 (46%), Gaps = 5/405 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P++V+ L+NG D ++ +M + F L + K + +
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L +I G P+++TY ++I YCK G+++ A + ++M R P+ TY +LM G
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L K+ K+ +A L +M G+ P++++Y TL+ C E + L M NG+ PD
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ-DNRPFAATSLL 438
++ K GR A + +V R GV++++ Y LI + N FAAT L+
Sbjct: 567 EHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAAT-LI 622
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
ER+ +G P Y+ L+ +LCK + +AL + D+M R IK ++ Y LI
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ A + +EM SG P + V IN YC E + AE L+ ++ D +Y
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + KR + PN T ++ L KG
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 787
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 198/442 (44%), Gaps = 19/442 (4%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ VK + ++ K G P++++ LL G + D ++++E M + G+
Sbjct: 505 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 564
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ H + +LT CK G ++ F I +G V Y TLI + K G + A L
Sbjct: 565 PDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD TY+ L++ LCK+ ++ EA + +M RG+ I +Y LI +
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
EGK +K + EM +G P T + + Y KEGRL A +L+++++R GV+
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD-----SVADALL- 471
Y+ LI A S L+R+ P+ Y L++ L K + SV + +
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801
Query: 472 ----------LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
L + MV + P+++TY +LI FC GR EA L+D M G+ P+
Sbjct: 802 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 861
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
I +LI C K KA + + ++ ESY + +GD K+ L
Sbjct: 862 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
L LG+ + + K + L K
Sbjct: 922 LELGYNHDEVAWKILNDGLLKA 943
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 21/283 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K G + ++ K G P +V+ N L++G + ID+ + + M P
Sbjct: 713 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 772
Query: 239 NTHTFNILTHVFCKNG----------------DVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
N T+ +L K ++D LE++ + G +P + TY++LI
Sbjct: 773 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 832
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK GRL +A L M + + P+ YT L+ C +A M G
Sbjct: 833 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQ 892
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P + SY L+ C EG ++ KSL +++ G D +I+ G K G + +
Sbjct: 893 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 952
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+ +++ IS Y AL + ++SL+ + ++
Sbjct: 953 LSIMEKRYCCISSQTY-----ALVTNKMHEVSSSLVSEVREEA 990
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 192/419 (45%), Gaps = 37/419 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + F G P +C LL L + +V++EM R G+ TH +N +
Sbjct: 126 DAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAML 185
Query: 248 HVFCKNGDVDKVNGFL-----------------------------------EKIEEEGFD 272
HV K GD + + +++++EG
Sbjct: 186 HVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIR 245
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD VT+N+ I CK+GR+ +A L+ M PD VTYTTL++G C+ G V EA +L
Sbjct: 246 PDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKL 305
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
RM G+ P + +YN ++ C++G M+E LL+EM G + D TC ++ Y K
Sbjct: 306 RGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCK 365
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + SA + ++ G+ ++ Y LI C+ A ++ G+ P+ +
Sbjct: 366 RGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSV 425
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
++ L++ CK ++ L + DE++ R + P + YR+LI C G +A + D+M
Sbjct: 426 FSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQ 485
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT-ESYNAVFNMFAEDGD 570
G++ DS + L Y + + A L K Q+Y T + YN + +A++ +
Sbjct: 486 SKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKN-QLYITPQIYNCLCTSYADEKE 543
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 124/286 (43%)
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L + + +A ++F M RGL+PD + L+ A + ++ + EM G+
Sbjct: 118 LAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAAT 177
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ K G A +V + GV++ R Y+ +I C+ + A +
Sbjct: 178 THVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARD 237
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R+ ++G P +N + LCK V +A L EMV P TY LI +C G
Sbjct: 238 RMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAG 297
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
EAV L M +GMLP ++ C + ++ + LL + D + N
Sbjct: 298 NVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCN 357
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ N + + GD++ +++K+ + G N+ T K +IH K E
Sbjct: 358 TLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARE 403
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 136/349 (38%), Gaps = 35/349 (10%)
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
H + L V ++ + + G PD L+++ + A ++
Sbjct: 109 HVPSWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDE 168
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + Y +++ K G +A + RM G++ D SYNT+I YC++G
Sbjct: 169 MARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGM 228
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E+ M GI PDT T + G KEGR+ A L E+ + Y
Sbjct: 229 GYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTT 288
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ A L R+ G +P + YN ++ LC+ ++ + L EM R
Sbjct: 289 LIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRK 348
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++ T LI +C G A + +M+ESG+ + + LI+G+C ++++ A+
Sbjct: 349 VQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAK 408
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
FQ+ D GF+PN
Sbjct: 409 EAF------FQMVDA-----------------------------GFSPN 422
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 2/261 (0%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P + S+ L+ A + + ++ + M G+ PD C ++ + +A
Sbjct: 107 GPHVPSWLVLVLA--QSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARR 164
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ E+ R G++ + +Y+ ++ + A +++ R+ G YN ++ C
Sbjct: 165 VFDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYC 224
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +A+ +D M I+P T+ + I C GR EA L EM+ + PD+
Sbjct: 225 RKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNV 284
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+GYC +V +A L G + +YNA+ EDG++ ++ L
Sbjct: 285 TYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEM 344
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
+++TC +I++ K
Sbjct: 345 DGRKVQADHVTCNTLINAYCK 365
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 194/380 (51%), Gaps = 7/380 (1%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ S+ + + LD G+ P+ N L++G K+ + V++E+ + G+ P +FN
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182
Query: 246 LTHVFCKNGDVDKVNGFLEK--IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L CK G V++ GF K +E E PD+ T++ LI+ CK+GRL++ L+ M
Sbjct: 183 LISGCCKAGAVEE--GFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCG 240
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++P+ VT+T L++G CK GKV A + F M+ +G+ PD+V+YN LI CK G ++E
Sbjct: 241 KGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKE 300
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ L+ EM +G+ PD T ++ G K G + SAL + + G+ + + LI
Sbjct: 301 ARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLIS 360
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+D R A +L + G+ P Y +++ CK +V L EM P
Sbjct: 361 GLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVP 420
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY AL+ C G+ A L+D ML G+ P+ +L+ G+ +
Sbjct: 421 GVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVDVDI-- 478
Query: 544 GFFAKKFQIYDTESYNAVFN 563
F ++K + D SY A+ N
Sbjct: 479 -FNSEKGLVKDYASYTALVN 497
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 180/350 (51%), Gaps = 3/350 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + + F + G +P++VS N L++G K +++ +++ M +CP
Sbjct: 151 GFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCP 210
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF+ L + CK G +D+ + +++ +G P+ VT+ LI CK G+++ A +
Sbjct: 211 DVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNF 270
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++M + V PDLVTY L+NGLCK G ++EA +L + M GL PD +++ TLI CK
Sbjct: 271 QMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKY 330
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M+ + + M+ GI D +++ G ++GR+ A ++ ++ G Y
Sbjct: 331 GDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTY 390
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ C+ LL+ + DG+VP + YN LM LCK V +A +L D M++
Sbjct: 391 TMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLN 450
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
+ P+ TY L+ G + G +V + E G++ D L+N
Sbjct: 451 VGVAPNDITYNILL---EGHSKHGSSVDVDIFNSEKGLVKDYASYTALVN 497
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 161/338 (47%)
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
++++ F ++ + G+ P+ +N L+ +CK G + A ++ + +R + P +V++
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
TL++G CK G V E +L M + PD+ +++ LI CKEG++ E L EM G
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ P+ T +++ G K G++ AL + GV Y+ LI LC+ A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L+ + G P + L++ CK + AL +K MV+ I+ + LI
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C GR +A ++ +ML +G PD ++++ +C + +V LL +
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+YNA+ N + G + L L +G APN++T
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDIT 459
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L+ C+ +A + + I + G P++ +N L+ CK +V + LK M
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P + T+ ALI C GR E L DEM G++P+ VLI+G C V+
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + D +YNA+ N + GDL + L G P+ +T +I
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 110/243 (45%)
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++ S + E++ +G P+ F +++ G+ K G + SA + E+ + G+ + ++
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C+ L + + P + ++ L+ LCK + + LL DEM +
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ T+ LI C G+ A+ ML G+ PD LING C D+ +A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L+ + D ++ + + + GD+ +E+++R + G +++ +I
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361
Query: 600 LWK 602
L +
Sbjct: 362 LCR 364
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 55/129 (42%)
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
E++D P+ + L+ FC +G G A + DE+ + G+ P LI+G C
Sbjct: 132 EVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAG 191
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
V + L G + D +++A+ N ++G L + L G PN +T
Sbjct: 192 AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFT 251
Query: 595 YMIHSLWKG 603
+I KG
Sbjct: 252 VLIDGQCKG 260
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 207/420 (49%), Gaps = 11/420 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+PT Y + + L S A+++L ++ + + C ++ F LIS +
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK--RGCVPNIQTFTALISGLSRDGKFEI 360
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+GL + K L G P+ V+ N L+N L + + +++ M G P+T
Sbjct: 361 AIGL-------YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + FC GD+ K +K+ + G P+++TYNTLI YCK+G LN+A L IM
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD TYT L++G + GK+ A LF+ M+ G+SP+ V+Y +I Y K+
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ +L ++M+ +G P + T +++ G+ K + A N ++ + G+ + Y
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL--LKDEMVDR 479
I LC++ R A + + + Y P+L Y+ L+ LC+ DA + L +
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P++ TY L+ CG GR EA L+ M + G+ P +I R L+ G C V A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 259/573 (45%), Gaps = 27/573 (4%)
Query: 45 SNPLYNFLPETQNP-----NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVL 99
S+PL + T NP +KI ++ S + S L L LKP H + +L
Sbjct: 35 SSPLP--ISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKP-------HHVVNIL 85
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
+ ++ S L FF W+ K S + +++ L + F+ A + +++ ++
Sbjct: 86 -QTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNE 144
Query: 160 PHSVDVFQDLISCTEDCNWAYV------------KVGLIRESFKTFRKTLDVGFQPSIVS 207
V Q L ++ Y K ++ + + K L+ G +PS+++
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N ++N L K + + + + R PN T+ L C+N ++D +++
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
++G DP+ VTY+TLI+ C +GRL +A + M ++ + P + TYT + LC G
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +L +M RG P+I ++ LI ++GK + + L ++M+ +G+ P T T ++
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
EGR +A + + G S Y+ +I C A + +++ + G
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN L+ CK ++ +A+ L + M +KP TY LI F G+ A SL
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M+E G+ P+ +I+GY V+ A AL + + +++YN + + F++
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+S+ + ++ G PN +T I L
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 206/478 (43%), Gaps = 50/478 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYV 181
P + Y ++ N+ A M +V+ D P+SV + LI+ C+E
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCD-PNSV-TYSTLINGLCSE------- 285
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G + E+ + + G +P++ + L L C + ++ +M + G PN
Sbjct: 286 --GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L ++G + G K+ +G P VTYN LI+ C +GR AF +++ M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LP TY ++ C G +++A +F +M+ G SP++++YNTLI+ YCK+G +
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI-------- 413
+ LL M GNG+ PD +T ++ G+ + G+L A +L + G+S
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 414 ---------------------------SRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
S Y+ +I + N A + ++ + G
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGL 583
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS--GEA 504
+P++ Y ++ LC+ A + EM RN P+L TY +LI C GR+ E
Sbjct: 584 LPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEM 643
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+L+ + G P+ L+ G C E +A+ L+ KK E Y A+
Sbjct: 644 YNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 193/437 (44%), Gaps = 16/437 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT+ Y +++ L +F A + + L S + ++I C + +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWM--LSHGSLPSTQTYNEIIKC-------FCLM 425
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I+++ F K L G P++++ N L+ G K ++ ++ E M G+ P+ T+
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L F + G ++ + E G P+ VTY +I Y +++DA L+ M
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
LP TY +++G K + EA +MV +GL P++++Y + I C+ G+
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA--LNLVVELQRFGVSISRDIYDYL 421
+ + +EM +P+ +T ++ G +EGR A NL+ L +G + D Y L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC + R + A L+ + + G PS EIY L+ CK V AL + M
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ LS Y+ALIC C EA + MLE D VL++G E + +
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLK 785
Query: 542 LLGFFAKK-----FQIY 553
LL + FQ Y
Sbjct: 786 LLHVMESRNCTLNFQTY 802
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 148/296 (50%), Gaps = 6/296 (2%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
L ++TTL+ L K V A ++ +M++ G+ P ++++NT+I CK+G++QE+K ++
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+ YP+ FT ++ G+ + L A + + + G + Y LI LC +
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
R A +LE + Q G P++ Y + SLC ++A+ L +M R P++ T+
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346
Query: 490 ALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
ALI G+ R G+ A+ L +ML G++P + LIN C+E A + +
Sbjct: 347 ALI---SGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ T++YN + F GD+ K M + + L+ G +PN +T +I+ K
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK 459
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 199/412 (48%), Gaps = 33/412 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+VG+ E+ +T GF P I+SCNFL+N L++ ID +Y + R+G+ P
Sbjct: 166 AYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNP 225
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+ I C+ G+ ++ ++EE G +P+ VT +T I C R + +
Sbjct: 226 NDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEAL 285
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + N D YT ++ G C E K++EA +F MV+ G++PD Y LI AYCK
Sbjct: 286 RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKA 345
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF---GVSISR 415
G + ++ +L +M+ NGI NLV + + F G+ +
Sbjct: 346 GNLLQAVALHNDMVSNGI----------------------KTNLVDQFKEFRDSGIFLDE 383
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI--YNELMESLCKCDSVADALLLK 473
+Y+ ++ ALC+ + A LL + G SL++ Y L+ C + DA +
Sbjct: 384 VLYNIVVDALCKLGKVEEAVELLNEM--KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 441
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+EM +R I+P + TY L+ F G EA+ L+D + G+ P+S +I G CM
Sbjct: 442 EEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMA 501
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
V +AEA L K E+Y+A+ + + + K EL R + G
Sbjct: 502 GKVKEAEAFLNTLEDKC----LENYSAMVDGYCKANFTRKAYELFSRLSKQG 549
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 176/416 (42%), Gaps = 55/416 (13%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G E+ FR+ + G P+ V+C+ + GL D ++ +
Sbjct: 236 ALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI 295
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T + + FC + + + EG PD Y LI +YCK G L A L+
Sbjct: 296 DTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALH 355
Query: 299 RIMYRRNVLPDLVT----------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
M + +LV Y +++ LCK GKV EA +L + M R +S
Sbjct: 356 NDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMS 415
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
D+V Y TLI YC +GK+ ++K++ EM GI PD T I+V G+ + G AL L
Sbjct: 416 LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALEL 475
Query: 403 VVELQRFGVSISRDIYDYLIVALC-------------------------------QDNRP 431
+ + G+ + ++ +I LC + N
Sbjct: 476 LDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFT 535
Query: 432 FAATSLLERIGQDGYV--------PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A L R+ + G + P+ +Y +L+ + C+ + A L+ D +V+R I P
Sbjct: 536 RKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITP 595
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +I +C + EA + ++M E G+ PD V+++G+ ++ A
Sbjct: 596 DVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDA 651
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 16/331 (4%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +++ +K N +DQ ++E GI + +NI+ CK G V++ L +++
Sbjct: 356 NDMVSNGIKTNLVDQ----FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKG 411
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
D+V Y TLI+ YC +G+L DA ++ M R + PD+VTY L+ G + G +E
Sbjct: 412 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 471
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +L + +GL P+ ++N +I C GK++E+++ L + + + ++ +V
Sbjct: 472 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL--ENYSA--MVD 527
Query: 389 GYGKEGRLLSALNLVVELQRFG--------VSISRDIYDYLIVALCQDNRPFAATSLLER 440
GY K A L L + G V ++ +Y LI A C+D A + +
Sbjct: 528 GYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDM 587
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G P + Y ++ C+ + + +A + ++M +R IKP + TY ++
Sbjct: 588 LVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNN 647
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+A++L DEM+ G+ PD L+ G C
Sbjct: 648 LQDAINLYDEMIARGLQPDIVTYTALLPGKC 678
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 25/308 (8%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWAYVKVGLI 186
Y ++V L K A+++L E+ K S+DV + LI+ Y G +
Sbjct: 386 YNIVVDALCKLGKVEEAVELLNEM----KGRRMSLDVVHYTTLIA-------GYCLQGKL 434
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
++ F + + G +P IV+ N L+ G + + ++ + +G G+ PN+ T N +
Sbjct: 435 VDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRI 494
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
C G V + FL +E D L Y+ ++ YCK A+ L+ + ++ +
Sbjct: 495 IEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGI 550
Query: 307 L--------PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
L P+ + Y L+ C++G ++ A +F +V RG++PD+++Y +I YC+
Sbjct: 551 LRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRV 610
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++E++ + +M GI PD T +++ G+ K L A+NL E+ G+ Y
Sbjct: 611 NCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTY 670
Query: 419 DYLIVALC 426
L+ C
Sbjct: 671 TALLPGKC 678
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 167/419 (39%), Gaps = 42/419 (10%)
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-----GFDPD---- 274
W + ++ G N T+ L V C+ K+ L +I GFD
Sbjct: 80 AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139
Query: 275 -----------------LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
++ + L+ +Y + G ++A RR +P +++ LM
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
N L + GK+ A ++ + GL+P+ +Y I A C++G +E+ + EM G+
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ TC ++G R + L+ I Y +I C + + A +
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV 319
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST---------- 487
+ +G P IY L+ + CK ++ A+ L ++MV IK +L
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGI 379
Query: 488 ------YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
Y ++ C +G+ EAV L++EM M D LI GYC++ + A+
Sbjct: 380 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 439
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ ++ D +YN + F+ +G + +EL G PN+ T +I L
Sbjct: 440 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 158/337 (46%), Gaps = 63/337 (18%)
Query: 179 AYVKVGLIRES------FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
A K+G + E+ K R +LDV ++++ + L G L +D ++EEM
Sbjct: 392 ALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIA-GYCLQGKL----VD-AKNMFEEMK 445
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
GI P+ T+NIL F +NG + L+ I +G P+ T+N +I C G++
Sbjct: 446 ERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVK 505
Query: 293 DAFYLYRIMYRRNVLPD--LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--------S 342
+A N L D L Y+ +++G CK R+A++LF R+ +G+
Sbjct: 506 EAEAFL------NTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVE 559
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P+ + Y LI A+C++G M+ ++ + ++ GI PD T +++ GY + +N
Sbjct: 560 PNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR-------VNC 612
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E +RDI++ + ER G P + Y +++ K
Sbjct: 613 LRE--------ARDIFN----------------DMKER----GIKPDVITYTVVLDGHSK 644
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+++ DA+ L DEM+ R ++P + TY AL+ C G
Sbjct: 645 TNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFG 681
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 8/168 (4%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGIC--------PNTHTFNILTHVFCKNGDVDKVNGF 262
+++G K N + ++++ + + GI PN + L FC++GD+ +
Sbjct: 525 MVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLV 584
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ + E G PD++TY +I+ YC+ L +A ++ M R + PD++TYT +++G K
Sbjct: 585 FDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 644
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+++A L+ M+ RGL PDIV+Y L+ C G L E
Sbjct: 645 TNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEE 692
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 29/285 (10%)
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN---------GIYPD 379
A F ++ G ++ +Y LI C+ ++ +SLL E++G+ D
Sbjct: 80 AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
L+ L+++V+ + ++D I AL Q R
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVK-----AYVRVGMFDEAIDALFQTKRR-------- 186
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
G+VP + N LM L + + A+ + + + P+ TY I C G
Sbjct: 187 -----GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKG 241
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESY 558
EAV + EM E+G+ P++ C I G C K + EAL A + I DT +Y
Sbjct: 242 NFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPI-DTFAY 300
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
AV F + L + ++ + G AP+ +IH+ K
Sbjct: 301 TAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKA 345
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+LV D + D+I+ T N Y +V +RE+ F + G +P +++ +L
Sbjct: 581 AQLVFDMLVERGITPDVITYTMMIN-GYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 639
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+G K N + +Y+EM G+ P+ T+ L C G N +LE+
Sbjct: 640 DGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEE 692
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 207/420 (49%), Gaps = 11/420 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+PT Y + + L S A+++L ++ + + C ++ F LIS +
Sbjct: 303 IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKK--RGCVPNIQTFTALISGLSRDGKFEI 360
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+GL + K L G P+ V+ N L+N L + + +++ M G P+T
Sbjct: 361 AIGL-------YHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + FC GD+ K +K+ + G P+++TYNTLI YCK+G LN+A L IM
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM 473
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD TYT L++G + GK+ A LF+ M+ G+SP+ V+Y +I Y K+
Sbjct: 474 KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKV 533
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ +L ++M+ +G P + T +++ G+ K + A N ++ + G+ + Y
Sbjct: 534 DDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSF 593
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL--LKDEMVDR 479
I LC++ R A + + + Y P+L Y+ L+ LC+ DA + L +
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P++ TY L+ CG GR EA L+ M + G+ P +I R L+ G C V A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 259/573 (45%), Gaps = 27/573 (4%)
Query: 45 SNPLYNFLPETQNP-----NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVL 99
S+PL + T NP +KI ++ S + S L L LKP H + +L
Sbjct: 35 SSPLP--ISSTTNPFPELVSKISTILSSPKWEHSSELCHLSPKLKP-------HHVVNIL 85
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
+ ++ S L FF W+ K S + +++ L + F+ A + +++ ++
Sbjct: 86 -QTHKNTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNE 144
Query: 160 PHSVDVFQDLISCTEDCNWAYV------------KVGLIRESFKTFRKTLDVGFQPSIVS 207
V Q L ++ Y K ++ + + K L+ G +PS+++
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N ++N L K + + + + R PN T+ L C+N ++D +++
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
++G DP+ VTY+TLI+ C +GRL +A + M ++ + P + TYT + LC G
Sbjct: 265 KDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSS 324
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +L +M RG P+I ++ LI ++GK + + L ++M+ +G+ P T T ++
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALI 384
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
EGR +A + + G S Y+ +I C A + +++ + G
Sbjct: 385 NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN L+ CK ++ +A+ L + M +KP TY LI F G+ A SL
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M+E G+ P+ +I+GY V+ A AL + + +++YN + + F++
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+S+ + ++ G PN +T I L
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 206/478 (43%), Gaps = 50/478 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYV 181
P + Y ++ N+ A M +V+ D P+SV + LI+ C+E
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCD-PNSV-TYSTLINGLCSE------- 285
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G + E+ + + G +P++ + L L C + ++ +M + G PN
Sbjct: 286 --GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L ++G + G K+ +G P VTYN LI+ C +GR AF +++ M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
LP TY ++ C G +++A +F +M+ G SP++++YNTLI+ YCK+G +
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI-------- 413
+ LL M GNG+ PD +T ++ G+ + G+L A +L + G+S
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 414 ---------------------------SRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
S Y+ +I + N A + ++ + G
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGL 583
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS--GEA 504
+P++ Y ++ LC+ A + EM RN P+L TY +LI C GR+ E
Sbjct: 584 LPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEM 643
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+L+ + G P+ L+ G C E +A+ L+ KK E Y A+
Sbjct: 644 YNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 194/437 (44%), Gaps = 16/437 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT+ Y +++ L +F A + + L S + ++I C + +
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWM--LSHGSLPSTQTYNEIIKC-------FCLM 425
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I+++ F K L G P++++ N L+ G K ++ ++ E M G+ P+ T+
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L F + G ++ + E G P+ VTY +I Y +++DA L+ M
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
LP TY +++G K + EA +MV +GL P++++Y + I C+ G+
Sbjct: 546 SGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGL 605
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA--LNLVVELQRFGVSISRDIYDYL 421
+ + +EM +P+ +T ++ G +EGR A NL+ L +G + D Y L
Sbjct: 606 AFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTL 665
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC + R + A L+ + + G PS EIY L+ CK V AL + M
Sbjct: 666 VKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGF 725
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ LS Y+ALIC C EA + MLE D + VL++G E + +
Sbjct: 726 QLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLK 785
Query: 542 LLGFFAKK-----FQIY 553
LL + FQ Y
Sbjct: 786 LLHVMESRNCTLNFQTY 802
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 148/296 (50%), Gaps = 6/296 (2%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
L ++TTL+ L K V A ++ +M++ G+ P ++++NT+I CK+G++QE+K ++
Sbjct: 167 LCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS 226
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+ YP+ FT ++ G+ + L A + + + G + Y LI LC +
Sbjct: 227 HIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEG 286
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
R A +LE + Q G P++ Y + SLC ++A+ L +M R P++ T+
Sbjct: 287 RLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFT 346
Query: 490 ALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
ALI G+ R G+ A+ L +ML G++P + LIN C+E A + +
Sbjct: 347 ALI---SGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ T++YN + F GD+ K M + + L+ G +PN +T +I+ K
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCK 459
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 245/493 (49%), Gaps = 12/493 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F NW+ + KP +Y +++ LA K A+++ E+ E + V +
Sbjct: 168 ARGFLNWMWKE-GFKPDVFSYSTVINDLAKTGKLDDALELFDEMSE--RRVAPDVTCYNI 224
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI ++K + + + + K L D P++ + N +++GL K +D C ++
Sbjct: 225 LID-------GFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++ M + + +T++ L H C G+VDK ++ E D+VTYNT++ +C+
Sbjct: 278 WDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCR 337
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ ++ L+RIM +RN + ++V+Y L+ GL + GK+ EA ++ M +G + D +
Sbjct: 338 CGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTT 396
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y I C G + ++ ++ E+ G + D + I+ K+ RL A NLV E+
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMS 456
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ GV ++ + + LI L +D+R A+ L+ +G++G +P++ YN L+ LC+
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFG 516
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A EM++ +KP L TY L+ C + A+ L + L+SG+ PD + +LI
Sbjct: 517 EASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILI 576
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C ++ A ++ + + +YN + + + D ++ + ++G
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQ 636
Query: 588 PNNLTCKYMIHSL 600
P+ ++ ++ L
Sbjct: 637 PDIISYNTILKGL 649
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 205/436 (47%), Gaps = 39/436 (8%)
Query: 181 VKVGLIRESFKTFRKTLDV----GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+K+ ++ F+ R L+ GF+P + S + ++N L K +D ++++EM +
Sbjct: 156 IKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRV 215
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKI-EEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
P+ +NIL F K D +K+ E+ P++ T+N +IS K GR++D
Sbjct: 216 APDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
++ M + DL TY++L++GLC EG V +A +F+ +V R D+V+YNT++ +
Sbjct: 276 KIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGF 335
Query: 356 CKEGKMQES---------------------------------KSLLYEMM-GNGIYPDTF 381
C+ GK++ES ++++ +M G D
Sbjct: 336 CRCGKIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNT 395
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I + G G + AL ++ E++ G + Y +I LC+ R A++L++ +
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEM 455
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G + + N L+ L + ++DA LL M P++ +Y LIC C G+
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKF 515
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
GEA + + EMLE+G+ PD + +L+ G C ++ + A L F + D +N +
Sbjct: 516 GEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNIL 575
Query: 562 FNMFAEDGDLSKLMEL 577
+ G L M +
Sbjct: 576 IHGLCSVGKLDDAMTV 591
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 232/532 (43%), Gaps = 55/532 (10%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK- 157
LL+ + + +A F+ P ++ ++ H + + + + +VEL++
Sbjct: 16 LLKSEKNPRAAFALFDSATR----HPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRS 71
Query: 158 -DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGL 215
+C DV +I Y K + + F++ ++ G +P I S N LLN
Sbjct: 72 QECKCDEDVALSVIK-------TYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAF 124
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++ + ++ G+ PN T+N+L + CK + +K GFL + +EGF PD+
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDV 184
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF-- 333
+Y+T+I+ K G+L+DA L+ M R V PD+ Y L++G KE + A QL+
Sbjct: 185 FSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDK 244
Query: 334 -------------HRMVHRGLS---------------------PDIVSYNTLIFAYCKEG 359
H ++ GLS D+ +Y++LI C EG
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEG 304
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL--VVELQRFGVSISRDI 417
+ +++S+ E++ + D T ++ G+ + G++ +L L ++E QR V+I
Sbjct: 305 NVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIME-QRNSVNIVS-- 361
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI L ++ + AT + + GY Y + LC V AL + E+
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + Y ++I C C R EA +L+ EM + G+ +S +C LI G + ++
Sbjct: 422 SKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLS 481
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L+ K + SYN + E G + K L G P+
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPD 533
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 1/356 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I+ES + +R ++ +IVS N L+ GLL+ ID+ ++ M G
Sbjct: 334 GFCRCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ I H C NG V+K G ++++E +G D+ Y ++I CKK RL +A L
Sbjct: 393 DNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLV 452
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + V + L+ GL ++ ++ +A L M G P +VSYN LI C+
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEA 512
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK E+ + + EM+ NG+ PD T I++ G ++ ++ AL L + + G+ ++
Sbjct: 513 GKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMH 572
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC + A +++ + +L YN LME K A ++ M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYK 632
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
++P + +Y ++ C R A+ D+ G+ P +L+ K
Sbjct: 633 MGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 38/211 (18%)
Query: 420 YLIVALCQDNRPFAATSLLERIGQD-GYVPSLEIYNELMESL------------------ 460
+++ L + P AA +L + + GY S +Y+ ++ L
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRS 71
Query: 461 --CKCDS-VADALLL---KDEMVDRNI------------KPSLSTYRALICCFCGIGRSG 502
CKCD VA +++ K+ M DR + +P + +Y L+ F +
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWV 131
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+ SL +G+ P+ Q VLI C +K+ KA L + K+ D SY+ V
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVI 191
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
N A+ G L +EL AP ++TC
Sbjct: 192 NDLAKTGKLDDALELFDEMSERRVAP-DVTC 221
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 240/520 (46%), Gaps = 31/520 (5%)
Query: 92 AHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSS-NYCLIVHILAWNNKFSFAMKMLC 150
A +++ ++L D L FF+WV P + Y ++ +LA + FS M+++
Sbjct: 59 ASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFS-EMEVVL 117
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCN 209
E + + + P + + +I AY GL+ ++ + + L + P +++CN
Sbjct: 118 ENMRVEEMSP-TREAMSIVIQ-------AYSDSGLVEKALELYYFVLKTYTYFPDVIACN 169
Query: 210 FLLNGLLKLNCID------------QCWQVYEEMGRI--------GICPNTHTFNILTHV 249
LLN L+KL I+ C + E GR G PN +N L
Sbjct: 170 SLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDG 229
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
+CK GD++ NG +++ +GF P + TY +I+ +CKKG L M R + +
Sbjct: 230 YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVN 289
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+ Y T+++ K G + +A + M+ G PDIV+YNTLI C++GK+ E+ LL
Sbjct: 290 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 349
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+ +G G+ P+ F+ ++ Y K+G A N ++E+ G Y L+ L
Sbjct: 350 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A ++ E++ + G P IYN LM LCK + A LL EM+D+++ P Y
Sbjct: 410 EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 469
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
L+ F G EA L + +E GM P +I GYC + A A + K+
Sbjct: 470 TLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKR 529
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
D +Y+ V + + + DL ++ + +++ PN
Sbjct: 530 HLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V G + + K L+ G P N L++GL K + + EM + P+
Sbjct: 406 VVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDA 465
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+ L F +NG++D+ E E+G +P +V YN +I YCK G + DA
Sbjct: 466 FVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINR 525
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
M +R++ PD TY+T+++G K+ + A ++F MV P+++
Sbjct: 526 MKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVM 571
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 240/518 (46%), Gaps = 45/518 (8%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+S +V F D + P Y +++ L + + + A +L E+ +
Sbjct: 268 CRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS--CAELKP 325
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V V+ +LI +++ G E+FK ++ + G QP+ ++ + L+ GL K+ +
Sbjct: 326 NVVVYANLID-------GFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQM 378
Query: 222 DQC-----------------------------------WQVYEEMGRIGICPNTHTFNIL 246
D+ +++ EM GI PN +T++I+
Sbjct: 379 DRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIM 438
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
H C++G+ +K + LE++ +G P+ Y LIS YC++G ++ A ++ M + NV
Sbjct: 439 IHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNV 498
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
LPDL Y +L+ GL K G+V E+ + F +M RGL P+ +Y+ LI Y K G ++ ++
Sbjct: 499 LPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQ 558
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L+ M+ G+ P+ +++ Y K + + + GV + IY LI L
Sbjct: 559 LVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLS 618
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
AA +L I ++G VP + +Y+ L+ LCK A + DEM + + P++
Sbjct: 619 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 678
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
Y ALI C G A ++ + +L G++P+ LI+G C D++ A L
Sbjct: 679 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 738
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMEL-QKRFLR 583
D Y+ + + GDL + M L ++ FLR
Sbjct: 739 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 776
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 2/395 (0%)
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K+ D +V EM G NT T+N+L C++G V++ GF + +E+ G PD
Sbjct: 234 KVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGF 293
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TY LI+ CK R N+A L M + P++V Y L++G +EG EA ++ M
Sbjct: 294 TYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEM 353
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V G+ P+ ++Y+ L+ CK G+M + LL +M+ + PDT T +I++G+ +
Sbjct: 354 VAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSK 413
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L+ E++ G+S + Y +I LCQ P A+ LLE + G P+ +Y L
Sbjct: 414 KDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPL 473
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ C+ +V+ A + D+M N+ P L Y +LI +GR E+ +M E G+
Sbjct: 474 ISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGL 533
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
LP+ LI+GY D+ AE L+ + Y + + + D+ K+
Sbjct: 534 LPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSS 593
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
K L G +N +IH+L ME F+
Sbjct: 594 TFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFR 628
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 188/397 (47%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P++V L++G ++ D+ +++ +EM G+ PN T++ L CK G +D+ +
Sbjct: 323 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 382
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L+++ + PD +TYN +I + + DAF L M + P++ TY+ +++GL
Sbjct: 383 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 442
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C+ G+ +A L M +GL P+ Y LI YC+EG + + + +M + PD
Sbjct: 443 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 502
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
+ ++ G K GR+ + ++Q G+ + Y LI ++ +A L++R
Sbjct: 503 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 562
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G P+ IY +L+ES K D + M+D+ + Y LI G
Sbjct: 563 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A ++ + ++G +PD + LI+G C D KA +L +KK + YNA
Sbjct: 623 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNA 682
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + GD+S + L G PN +T +I
Sbjct: 683 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 719
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 201/433 (46%), Gaps = 8/433 (1%)
Query: 179 AYVKVGLIRESFKTFRKTL----DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY KV RE F T +K L + G + V+ N L+ GL + +++ + ++M
Sbjct: 231 AYCKV---RE-FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 286
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ P+ T+ L + CK+ ++ L+++ P++V Y LI + ++G ++A
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F + + M V P+ +TY L+ GLCK G++ A L +MV PD ++YN +I
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 406
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+ + +++ LL EM GI P+ +T I++ G + G A +L+ E+ G+ +
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+Y LI C++ A + +++ + +P L YN L+ L K V ++
Sbjct: 467 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 526
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+M +R + P+ TY LI + G A L+ ML++G+ P+ I L+ Y
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSD 586
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
D+ K + + + D Y + + + G++ + + G P+
Sbjct: 587 DIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYS 646
Query: 595 YMIHSLWKGMERK 607
+I L K +R+
Sbjct: 647 SLISGLCKTADRE 659
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 53/374 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K I + TF+ LD G L++ L ++ ++V + + G P
Sbjct: 581 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 640
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H ++ L CK D +K G L+++ ++G DP++V YN LI CK G ++ A ++
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD-------------- 344
+ + ++P+ VTYT+L++G CK G + A L++ M+ G++PD
Sbjct: 701 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760
Query: 345 --------------------IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
I S+N L+ +CK GKMQE+ LL+ +MG G+ P+ T +
Sbjct: 761 GDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIE 820
Query: 385 IIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ G + G+L + VEL Q+ S +R +SL +
Sbjct: 821 NIISGLSEAGKLSEVHTIFVELQQKTSESAARHF-----------------SSLFMDMIN 863
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G +P L++ ++++ CK ++ AL+L+D +V ++ S+Y A++ C G+ E
Sbjct: 864 QGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSE 922
Query: 504 AVSLMDEMLESGML 517
A++L+ EM + G L
Sbjct: 923 ALNLLKEMDKRGNL 936
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 209/462 (45%), Gaps = 9/462 (1%)
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
+F A K+L E+ E + C + + LI+ + G + E+F + D G
Sbjct: 237 EFDTAKKVLVEMRE--RGCGLNTVTYNVLIA-------GLCRSGAVEEAFGFKKDMEDYG 287
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P + L+NGL K ++ + +EM + PN + L F + G+ D+
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
++++ G P+ +TY+ L+ CK G+++ A L + M R + PD +TY ++ G
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
+ ++A +L M + G+SP++ +Y+ +I C+ G+ +++ LL EM G+ P+
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
F ++ GY +EG + A + ++ + V Y+ LI L + R +T +
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G +P+ Y+ L+ K + A L M+D +KP+ Y L+ +
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+ S ML+ G++ D++I +LI+ ++ A +L K + D Y++
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + D K + + G PN + +I L K
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCK 689
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 184/408 (45%), Gaps = 20/408 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K G + + + ++ LD G +P+ V LL K + I++ ++ M G+
Sbjct: 546 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 605
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + IL H +G+++ L IE+ G PD+ Y++LIS CK AF +
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ V P++V Y L++GLCK G + A +F+ ++ +GL P+ V+Y +LI CK
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 725
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDI 417
G + + L EM+ GI PD F ++ G G L A+ L+ E+ R SIS
Sbjct: 726 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS-- 783
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L+ C+ + LL I G VP+ ++ L + +++ + V
Sbjct: 784 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI---FV 840
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ K S S R SL +M+ G +P + +I +C E +++
Sbjct: 841 ELQQKTSESAARHF-------------SSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLD 886
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
KA L K SY A+ + G LS+ + L K + G
Sbjct: 887 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 154/325 (47%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ + + +YCK + A + M R + VTY L+ GLC+ G V EA M
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
GL PD +Y LI CK + E+K+LL EM + P+ ++ G+ +EG
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A ++ E+ GV ++ YD L+ LC+ + A+ LL+++ +D + P YN ++
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
E + S DA L EM + I P++ TY +I C G +A L++EM G+
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P++ + LI+GYC E +V+ A + K + D YN++ ++ G + + +
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G PN T +IH K
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLK 549
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 40/403 (9%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+ L++G + + +++++M ++ + P+ + +N L K G V++
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEES 521
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++E G P+ TY+ LI Y K G L A
Sbjct: 522 TKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA------------------------- 556
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
QL RM+ GL P+ V Y L+ +Y K +++ S M+ G+ D
Sbjct: 557 ----------EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLD 606
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ G + +A ++ +++ G +Y LI LC+ A +L+
Sbjct: 607 NRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILD 666
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P++ YN L++ LCK ++ A + + ++ + + P+ TY +LI C +G
Sbjct: 667 EMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG 726
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG--FFAKKFQIYDTES 557
A L +EML +G+ PD+ + VL G D+ +A L+ F I S
Sbjct: 727 DISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASI---SS 783
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+N + + F + G + + ++L + G PN LT + +I L
Sbjct: 784 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 826
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%)
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S +R + + A C+ A +L + + G + YN L+ LC+ +V +A
Sbjct: 219 SAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG 278
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
K +M D + P TY ALI C RS EA +L+DEM + + P+ + LI+G+
Sbjct: 279 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFM 338
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
E + ++A ++ + +Y+ + + G + + L K+ +R P+ +
Sbjct: 339 REGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTI 398
Query: 592 TCKYMIHSLWKGMERK 607
T +I ++ +K
Sbjct: 399 TYNLIIEGHFRHHSKK 414
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 181/348 (52%), Gaps = 4/348 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LLN L+KL+ ++ +++EE R C +T TFNIL C G +K L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSG 234
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G PD+VTYNTLI +CK L A ++ + PD+VTYT++++G CK GK++
Sbjct: 235 FGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQ 294
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L M+ G+ P V++N L+ Y K G+M ++ + +M+ G +PD T ++
Sbjct: 295 EASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + G++ L E+ G+ + Y LI ALC++NR A LL ++ +
Sbjct: 355 DGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDII 414
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +YN +++ CK V +A+++ +EM + KP T+ LI C GR EAVS+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL-LGFFAKKFQIYD 554
+M+ G PD L++ C+ K EA L A K QI D
Sbjct: 475 FHKMVAIGCSPDKITVSSLLS--CLLKAGMAKEAYHLNQIAHKGQIND 520
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 3/357 (0%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+LT CK G D E ++ +G P+ L+SS+ +KG+L+ A L
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQS 164
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
Y V + +L+N L K +V +A +LF + D ++N LI C GK
Sbjct: 165 YE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-GVSISRDIYDY 420
+++ LL M G G PD T +++G+ K L A + +++ G S Y
Sbjct: 223 EKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTS 282
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I C+ + A+ LL+ + + G P+ +N L++ K + A ++ +M+
Sbjct: 283 MISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFG 342
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + T+ +LI +C +G+ + L +EM GM P++ +LIN C E + KA
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAR 402
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LLG A K I YN V + F + G +++ + + + + P+ +T +I
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILI 459
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 115/213 (53%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ +++G K + + + ++M R+GI P TFN+L + K G++
Sbjct: 272 GCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTA 331
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
K+ G PD+VT+ +LI YC+ G++N F L+ M R + P+ TY+ L+N
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCKE ++ +A +L ++ + + P YN +I +CK GK+ E+ ++ EM PD
Sbjct: 392 LCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPD 451
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
T I++ G+ +GR+ A+++ ++ G S
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 103/189 (54%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + + + K + G P +V+ L++G ++ ++Q ++++EEM G+ P
Sbjct: 321 GYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFP 380
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++IL + CK + K L ++ + P YN +I +CK G++N+A +
Sbjct: 381 NAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIV 440
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ PD +T+T L+ G C +G++ EA +FH+MV G SPD ++ ++L+ K
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Query: 359 GKMQESKSL 367
G +E+ L
Sbjct: 501 GMAKEAYHL 509
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 154 ELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
E+ D S D+++ T + Y K G ++E+ L +G P+ V+ N L++
Sbjct: 262 EMFDDVKSSSGCSPDVVTYTSMIS-GYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVD 320
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
G K + ++ +M G P+ TF L +C+ G V++ E++ G P
Sbjct: 321 GYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFP 380
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+ TY+ LI++ CK+ RL A L + ++++P Y +++G CK GKV EA +
Sbjct: 381 NAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIV 440
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M + PD +++ LI +C +G+M E+ S+ ++M+ G PD T ++ K
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Query: 394 GRLLSALNL 402
G A +L
Sbjct: 501 GMAKEAYHL 509
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 138/305 (45%), Gaps = 9/305 (2%)
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ N+ TY L LCK G A Q+F M G+SP+ L+ ++ ++GK+
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKL 154
Query: 362 QESKSLL---YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +LL YE+ G + ++ ++ K R+ A+ L E RF +
Sbjct: 155 HCATALLLQSYEVEGCCMVVNSLLNTLV-----KLDRVEDAMKLFEEHLRFQSCNDTKTF 209
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA-LLLKDEMV 477
+ LI LC + A LL + G +P + YN L++ CK + + A + D
Sbjct: 210 NILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKS 269
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P + TY ++I +C G+ EA L+D+ML G+ P + VL++GY +++
Sbjct: 270 SSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMH 329
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AE + G D ++ ++ + + G +++ L + G PN T +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 598 HSLWK 602
++L K
Sbjct: 390 NALCK 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 38/260 (14%)
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN L + CK G + + M +GI P++ +V + ++G+L A L+++
Sbjct: 105 TYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQ- 163
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
Y + C + N L+ +L K D V
Sbjct: 164 ------------SYEVEGCCM------------------------VVNSLLNTLVKLDRV 187
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA+ L +E + T+ LI CG+G++ +AV L+ M G LPD L
Sbjct: 188 EDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTL 247
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
I G+C ++ KA + D +Y ++ + + + G + + L LRLG
Sbjct: 248 IKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLG 307
Query: 586 FAPNNLTCKYMIHSLWKGME 605
P N+T ++ K E
Sbjct: 308 IYPTNVTFNVLVDGYAKAGE 327
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 182/365 (49%), Gaps = 7/365 (1%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI+ AY++ G +R++ + + T +C +L L+KL
Sbjct: 49 VFSGLIT-------AYLESGFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLV 101
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W YEE+ G + + FNIL H FCK+GD+ + I + G P V+YNTL++
Sbjct: 102 WGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNG 161
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
Y + G L++ F L M V PD+ TY+ L+NGLCKE K+ +A +LF M+ +GL P+
Sbjct: 162 YIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPN 221
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V++ TLI +CK G++ + + +M+ + PD T ++ G K+G L A +L+
Sbjct: 222 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 281
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ R G+ + Y LI C++ +A +R+ Q+ +Y L+ LC+
Sbjct: 282 DMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEG 341
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
DA + EM+ + P TY +I FC G + L+ EM G +P
Sbjct: 342 RSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYN 401
Query: 525 VLING 529
VL+NG
Sbjct: 402 VLMNG 406
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 163/385 (42%), Gaps = 36/385 (9%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAF------- 295
++L V + G F +E +G D+ ++ LI++Y + G L DA
Sbjct: 15 SLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYXLTR 74
Query: 296 ----------------YLYRIMYRRNVL------------PDLVTYTTLMNGLCKEGKVR 327
YL ++ Y + V L + LM+ CK+G +R
Sbjct: 75 KHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIR 134
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A +F + GL P VSYNTL+ Y + G + E L M+ +G+ PD +T +++
Sbjct: 135 VAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLI 194
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G KE ++ A L E+ G+ + + LI C++ R A + +++ +
Sbjct: 195 NGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLL 254
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L YN L+ LCK + A L D+M + +KP TY LI C G A
Sbjct: 255 PDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEH 314
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+++ + D + LI+G C E AE +L DT +Y + N F +
Sbjct: 315 RKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCK 374
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLT 592
GD+ K +L K R G P+ +T
Sbjct: 375 KGDVWKGSKLLKEMQRDGHVPSVVT 399
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 194/419 (46%), Gaps = 37/419 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + F + G P +C LL L + +V++EM R G+ +TH +N +
Sbjct: 132 DALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAML 191
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
HV K GD + + +++ G D +YNT+I+ YCKKG +A + M + +
Sbjct: 192 HVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIR 251
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D VT+ +L++GLCK G+V+EA QLF M +PD V+Y TLI YC+ G ++E+ L
Sbjct: 252 ADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKL 311
Query: 368 LYEMMGNGIYP-----------------------------------DTFTCQIIVQGYGK 392
EM G+ P D TC ++ Y K
Sbjct: 312 RGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCK 371
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + SA + ++ G+ +++ Y LI C+ A ++ G+ P+ +
Sbjct: 372 RGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSV 431
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
++ L++ CK ++ LL+ DE++ R + P + YR+LI C G +A + D+M
Sbjct: 432 FSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQ 491
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT-ESYNAVFNMFAEDGD 570
G++ DS + L Y E A L AK Q+Y T + YN + +A++ +
Sbjct: 492 SKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKN-QLYITPQIYNCLCTSYADEKE 549
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 142/287 (49%), Gaps = 6/287 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E+ + F + P V+ L++G + I++ ++ EM G+ P
Sbjct: 266 KYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVA 325
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C++G + +VN L +++E D VT NTLI++YCK+G + A + + M
Sbjct: 326 TYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKM 385
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + TY L++G CK ++ EA + F +MV G SP+ ++ L+ +CK+
Sbjct: 386 MESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNA 445
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ E+M G+ PD + +++ ++G + A + ++Q G+ +Y L
Sbjct: 446 DAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATL 505
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ +P AA++ L+ + ++ + +IYN C C S AD
Sbjct: 506 AYTYLTEGKPVAASNTLDGMAKNQLYITPQIYN------CLCTSYAD 546
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 130/277 (46%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K G+ E+ + G + V+ N L++GL K + + Q++ EM P+
Sbjct: 229 YCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPD 288
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L +C+ G++++ ++E G P + TYN ++ C+ G++ + L
Sbjct: 289 NVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLN 348
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R V D VT TL+N CK G + A ++ +M+ GL + +Y LI +CK
Sbjct: 349 EMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAK 408
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E+K ++M+ G P+ +V G+ K+ + L + EL + G+ + +Y
Sbjct: 409 ELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYR 468
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
LI LC+ A + +++ G V +Y L
Sbjct: 469 SLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATL 505
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 139/318 (43%), Gaps = 2/318 (0%)
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
DP + ++ L+ + R +DA ++ M R + PD T L+ L + A +
Sbjct: 113 DPRVPSWLVLV--LAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARR 170
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+F M GL+ YN ++ K G +++L+ M G+ D F+ ++ Y
Sbjct: 171 VFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYC 230
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K+G A+ + + + G+ ++ LI LC+ R A L + P
Sbjct: 231 KKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNV 290
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y L++ C+ ++ +A+ L+ EM + P ++TY A++ C G+ E L++EM
Sbjct: 291 TYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEM 350
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
E + D C LIN YC + A + + + +Y A+ + F + +L
Sbjct: 351 DERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKEL 410
Query: 572 SKLMELQKRFLRLGFAPN 589
+ E + + GF+PN
Sbjct: 411 DEAKEAFFQMVDAGFSPN 428
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%)
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L + + +A ++F +M RGL+PD + L+ A + ++ + EM G+
Sbjct: 124 LAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVS 183
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ K G A LV + GV + R Y+ +I C+ + A + +
Sbjct: 184 THVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRD 243
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R+ ++G +N L+ LCK V +A L EM P TY LI +C G
Sbjct: 244 RMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAG 303
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
EAV L EM +GMLP ++ C + + + LL ++ D + N
Sbjct: 304 NIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCN 363
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ N + + G ++ +++K+ + G N T K +IH K E
Sbjct: 364 TLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKE 409
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G I E+ K + G P + + N +L L + + + Q+ EM +
Sbjct: 298 GYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQA 357
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T N L + +CK G + +K+ E G + TY LI +CK L++A +
Sbjct: 358 DHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAF 417
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P+ ++ L++G CK+ + ++ RGL PD Y +LI C++
Sbjct: 418 FQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRK 477
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + +++ + +M G+ D+ + Y EG+ ++A N + + + + I+ IY
Sbjct: 478 GLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIY 537
Query: 419 DYL 421
+ L
Sbjct: 538 NCL 540
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 13/237 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y I+ L + K ++L E+ E V D ++C N AY K
Sbjct: 322 PGVATYNAILRKLCEDGKMKEVNQLLNEMDER--------KVQADHVTCNTLIN-AYCKR 372
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + K +K ++ G Q + + L++G K +D+ + + +M G PN F
Sbjct: 373 GHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVF 432
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L FCK + D V +++ + G PD Y +LI C+KG ++ A ++ M
Sbjct: 433 SWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQS 492
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAYCKE 358
+ ++ D + Y TL EGK A M L +P I YN L +Y E
Sbjct: 493 KGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQI--YNCLCTSYADE 547
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 1/424 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+V+ +E++ F+ L P ++ + L+NG K Q +++ +EM + GI P
Sbjct: 7 AFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVP 66
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N + C NG VD ++ P ++TY L+ + CK R++DA +
Sbjct: 67 HNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCA-PSVITYTILVDALCKSARISDASLIL 125
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P++VTY TL+NG CK G + EA LF++M+ SPD+ +YN LI YCK+
Sbjct: 126 EDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQ 185
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ Q+ LL EM+ G P+ T ++ K G+ + A NL + R S +
Sbjct: 186 ERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTF 245
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ + A L + + G +P + YN ++ C+ + + DA L + M +
Sbjct: 246 NLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE 305
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P + TY +++ C + EA + + + G D C LI+G C + ++
Sbjct: 306 AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDD 365
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
AE LL + D +Y + + F + L K + L G P +T +I
Sbjct: 366 AEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 425
Query: 599 SLWK 602
L K
Sbjct: 426 KLCK 429
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 187/395 (47%), Gaps = 10/395 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P ++ Y I+ L N + A L ++ + C SV + L+ A
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSA---LVHYRDMQRHCAPSVITYTILVD-------ALC 113
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K I ++ ++ G P++V+ N L+NG KL +D+ ++ +M P+
Sbjct: 114 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 173
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NIL +CK L+++ + G +P+ +TYNTL+ S K G+ DAF L ++M
Sbjct: 174 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 233
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RR+ P T+ +++ CK G++ A++LF M RG PDI +YN +I C+ ++
Sbjct: 234 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 293
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ LL M G PD T IV G K ++ A + L+ G + L
Sbjct: 294 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 353
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A LL + ++G P + Y L+ CK D + +L EM+D+
Sbjct: 354 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 413
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
P++ TY +I C R + L+ MLE G+
Sbjct: 414 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 159/341 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+++ L++ L K I + E+M G PN T+N L + FCK G++D+
Sbjct: 100 PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVL 159
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E PD+ TYN LI YCK+ R D L + M + P+ +TY TLM+ L K
Sbjct: 160 FNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVK 219
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK +A L M+ R P ++N +I +CK G++ + L M G PD +T
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ G + R+ A L+ + G Y+ ++ LC+ ++ A + E +
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
GY + + L++ LCK + DA L EM P + Y LI FC +
Sbjct: 340 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLD 399
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++++ EML+ G +P ++I+ C V LL
Sbjct: 400 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLL 440
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 153/359 (42%), Gaps = 36/359 (10%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N L+S++ +K + +A+ L++ PD +TY+TL+NG CK ++A++L M
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ P YNT+I C G++ +S + Y M P T I+V K R+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRV-DSALVHYRDMQRHCAPSVITYTILVDALCKSARISD 120
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A ++ ++ G + + Y+ LI C+ A L ++ ++ P + YN L++
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 459 SLCKCDSVADALLLKDEMVD-----------------------------------RNIKP 483
CK + D L EMV R+ KP
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
S T+ +I FC +G+ A L M + G LPD ++I+G C ++ A LL
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +YN++ + + + + E+ + G+ + +TC +I L K
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 203/432 (46%), Gaps = 32/432 (7%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + N L++GL K + D+ ++ EM G+ P+T TFN + CK G ++ +
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + E P TYNTLIS CK+ ++ A L +PD+VTY+ L +GLCK
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ EA +L M G +P++V+YNTLI CK K +++ LL ++ +G PD T
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERI 441
IIV G KEGRL AL +V + + G + S Y L+ LC+ R A + E +
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 442 GQD-------------GY------------------VPSLEIYNELMESLCKCDSVADAL 470
+D GY P +++YN LM+ CK + +
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 307
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ ++M R P++ TY ++ C G+ EA ++ M +G +PD ++I+G
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+A +L + D +YN + F ++ + + K ++ G P+N
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDN 427
Query: 591 LTCKYMIHSLWK 602
+T +I L +
Sbjct: 428 VTYNTLISGLSQ 439
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 176/347 (50%), Gaps = 5/347 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+F G P +VS N +++GL K + + QV ++M + GI P+
Sbjct: 334 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAV 393
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FCK D G L+ + + G DPD VTYNTLIS + RL DA+ L M
Sbjct: 394 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453
Query: 302 YRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
R V+ TY T+++ LCKEG +++A L M G+ + V+YN I CKEG+
Sbjct: 454 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGR 513
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-GVSISRDIYD 419
+ E+ SLL EM D + ++ G K +L A L E+ G+ I+ ++
Sbjct: 514 LDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFN 570
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI A + R A +LLE + Q G PS+ YN ++ LCK D V A L DEM R
Sbjct: 571 LLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVR 630
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
I S +Y LI CG GR EA+ +++EM S D CR L
Sbjct: 631 GIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKL 677
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 197/383 (51%), Gaps = 13/383 (3%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
++V+ ++ P+ +DV+ L+ Y K G + E F G P+I + N
Sbjct: 276 KVVDGIRGTPY-IDVYNALMD-------GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNI 327
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+++GL K +D+ + E M G P+ ++NI+ K + L+++ + G
Sbjct: 328 VMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAG 387
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD VTYNTL++ +CK+ R +DA + + M + V PD VTY TL++GL + ++ +A+
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447
Query: 331 QLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+L H M+ G + +YNT+I CKEG ++++ L+ M G+G+ +T T I +
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 507
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERIGQDGYVP 448
KEGRL A +L+ E+ +S Y +I+ LC+ + A+ L E + G
Sbjct: 508 LCKEGRLDEASSLLSEMDTLRDEVS---YTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 564
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ +N L+++ K + +AL L + MV R PS+ TY +I C C + + +A L
Sbjct: 565 TSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 624
Query: 509 DEMLESGMLPDSQICRVLINGYC 531
DEM G++ S VLI G C
Sbjct: 625 DEMAVRGIVASSVSYTVLIYGLC 647
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 165/337 (48%), Gaps = 3/337 (0%)
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ E PD+ TYN LI CK + + A + M R V PD VT+ ++M+GLCK GK
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
AH L M R P +YNTLI CK+ + +K+L+ E + +G PD T I
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+ G K GR+ A LV E+ G + + Y+ LI LC+ ++ A LLE + G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+VP + Y +++ LCK + AL + + M+ R PS+ TY AL+ C GR EA
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ EM+ D+ L+NGYC +A+ ++ I + YNA+ + +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGY 297
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G L ++ + + G PN T ++ L K
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK 334
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 196/397 (49%), Gaps = 4/397 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I E+F+ ++ G P++V+ N L++GL K + ++ +++ E + G P+
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ I+ CK G +DK +E + + G P ++TY L+ C+ GR+++A ++++ M
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ D + Y +L+NG CK + +EA ++ + RG +P I YN L+ YCKEG++
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRL 303
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E ++ +M G P+ T I++ G K G++ A + + G Y+ +
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 363
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I L + ++P A +L+++ Q G P YN LM CK + DA+ + M+ +
Sbjct: 364 IDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQICRVLINGYCMEKDVNKAE 540
P TY LI R G+A LM EML +G ++ +I+ C E + +A
Sbjct: 424 DPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQAL 483
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L+ +T +YN + ++G L + L
Sbjct: 484 LLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSL 520
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 178/372 (47%), Gaps = 3/372 (0%)
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P+ T+NIL CK DK + L ++ + G PD VT+N+++ CK G+ A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L +M RN P TY TL++GLCK+ V A L V G PD+V+Y+ L
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK G++ E+ L+ EM GNG P+ T ++ G K + A L+ L G
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y ++ LC++ R A ++E + + G PS+ Y LME LC+ V +A + E
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
MV ++ Y +L+ +C R+ EA ++D + + P + L++GYC E
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVYNALMDGYCKEGR 302
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+++ + A + + + ++YN V + + G + + + G P+ ++
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362
Query: 596 MIHSLWKGMERK 607
+I L+K + K
Sbjct: 363 IIDGLFKASKPK 374
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 214/480 (44%), Gaps = 50/480 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +IV L + A+KM+ + L + C SV + L+ +
Sbjct: 183 PDVVTYTIIVDGLCKEGRLDKALKMVEGM--LKRGCTPSVITYTALME-------GLCRT 233
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ F++ + ++ L+NG K + + +V + I P +
Sbjct: 234 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG---IRGTPYIDVY 290
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +CK G +D++ E + G P++ TYN ++ CK G++++AF M+
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 350
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+PD+V+Y +++GL K K +EA Q+ +M+ G+ PD V+YNTL+ +CKE + +
Sbjct: 351 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M+ G+ PD T ++ G + RL A L+ E+ R G +S
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS--------- 461
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A T+ YN +++ LCK + ALLL D M ++
Sbjct: 462 ---------ACTT----------------YNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY I C GR EA SL+ EM L D +I G C + +++A L
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLA 553
Query: 544 -GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A K + ++N + + F + L + + L + ++ G +P+ +T +I L K
Sbjct: 554 REMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCK 613
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRI-GICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
VS ++ GL K +D+ ++ EM + G+C +HTFN+L F K +D+ LE
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLE 590
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+ + G P ++TYN +I+ CK +++ A+ L+ M R ++ V+YT L+ GLC +G
Sbjct: 591 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 650
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+ +EA Q+ M D + L A +G+ +E+ LL M
Sbjct: 651 RGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 33/241 (13%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL----- 263
N +++ L K C+ Q + + M G+ NT T+NI CK G +D+ + L
Sbjct: 467 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 526
Query: 264 ----------------------------EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
E + +G T+N LI ++ K RL++A
Sbjct: 527 LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL 586
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L +M +R P ++TY ++ LCK KV +A +LF M RG+ VSY LI+
Sbjct: 587 TLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 646
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C +G+ +E+ +L EM + D C+ + +GR A L+ + S+S
Sbjct: 647 CGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTKMDSLSL 706
Query: 416 D 416
D
Sbjct: 707 D 707
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 202/419 (48%), Gaps = 7/419 (1%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
CP V + +I+ + + G + +++ F + +D G P++V+ +++GL K
Sbjct: 157 CPPDVVAYNTVIN-------GFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+D+ V+++M G+ P+ T+N L H + G +V LE++ G +PD +TY
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
L+ CK GR +A + M+R+ + PD+ Y L++G +G + E H MV
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G+SP+ +N + AY K+ ++E+ + +M G+ PD + ++ K GR+
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A+ ++ GV+ + ++ L+ LC + A L + G +N LM
Sbjct: 390 AVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMC 449
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+LC V +A L D M+ ++P++ +Y L+ C GR EA L+D M+ +G+ P
Sbjct: 450 NLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKP 509
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+ +L+ GYC + V+ A +L K +YN + + + G S+ EL
Sbjct: 510 NEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 202/422 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+ G +E + + G +P ++ LL+ L K + ++ M R GI P
Sbjct: 240 GYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP 299
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + IL H + G + +++ FL+ + G P+ +N + +Y KK + +A +++
Sbjct: 300 DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIF 359
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + PD+V++ L++ LCK G+V +A F++M++ G++P+I +++L++ C
Sbjct: 360 NKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTV 419
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK ++++ L +E++ GI D ++ EGR++ A L+ + R GV + Y
Sbjct: 420 GKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISY 479
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ C R A LL+ + +G P+ Y L+ CK V DA L EM+
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLM 539
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P ++TY ++ GR EA L M+ S D +++NG C V++
Sbjct: 540 KGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDE 599
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A + K D+ ++N + + G M+L G P+ +T + +
Sbjct: 600 AFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659
Query: 599 SL 600
+L
Sbjct: 660 NL 661
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 206/492 (41%), Gaps = 48/492 (9%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D +KP + Y ++H K+ ++ML E+ L DC + L
Sbjct: 224 DRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYL------- 276
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
K G RE+ F G +P + LL+G + + + M G+
Sbjct: 277 ----CKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV 332
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN FNI+ + K +++ K+ ++G PD+V++ LI + CK GR++DA
Sbjct: 333 SPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVL 392
Query: 297 LYRIMYRRNVLP-----------------------------------DLVTYTTLMNGLC 321
+ M V P D V + TLM LC
Sbjct: 393 QFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLC 452
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
EG+V EA +L M+ G+ P+++SYNTL+ +C G++ E+ LL M+ NG+ P+ F
Sbjct: 453 NEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEF 512
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I+++GY K R+ A +L E+ GV+ Y+ ++ L Q R A L +
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ YN ++ LCK + V +A + + ++ + T+ +I GR
Sbjct: 573 INSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRK 632
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A+ L + G++PD R++ E + + + L K ++ NA+
Sbjct: 633 EDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNAL 692
Query: 562 FNMFAEDGDLSK 573
GD+S+
Sbjct: 693 VRRLLHRGDISR 704
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 175/368 (47%), Gaps = 6/368 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K +I E+ F K G P +VS L++ L KL +D + +M G+ P
Sbjct: 345 AYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTP 404
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N F+ L + C G +K ++ ++G D V +NTL+ + C +GR+ +A L
Sbjct: 405 NIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLI 464
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R V P++++Y TL+ G C G++ EA +L MV GL P+ +Y L+ YCK
Sbjct: 465 DLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKA 524
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ SL EM+ G+ P T I+ G + GR A L + + DIY
Sbjct: 525 RRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM--INSRTKCDIY 582
Query: 419 DYLIV--ALCQDNRPFAATSLLERI-GQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y I+ LC++N A + R+ +D + S+ +N ++ +L K DA+ L
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSV-TFNIMIGALLKGGRKEDAMDLFAT 641
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ + P + TYR + G GE L M +SG P+S + L+ D
Sbjct: 642 ISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGD 701
Query: 536 VNKAEALL 543
+++A L
Sbjct: 702 ISRAGVYL 709
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 219/497 (44%), Gaps = 43/497 (8%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTE--DCNWAYVKVGLIRESFKTFRKTLDVGFQ 202
A+K+ EL+ + P SV F L++ C+ A +V + F +
Sbjct: 33 ALKLFDELLHCAR--PASVRAFNQLLTVVSRAGCSSASERVVSL---FTRMARECSSKVA 87
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG- 261
P+ + + L+ ++ ++ + + + + G N + L C VD+
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ E G PD+V YNT+I+ + ++G++ A+ L+ M + + P++VTYTT+++GLC
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY-------------------------- 355
K V A +F +M+ RG+ PD +YN LI Y
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 356 ---------CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
CK G+ +E++ M GI PD I++ GY +G L + + +
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
GVS +R I++ + A + A + ++ Q G P + + L+++LCK V
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA+L ++M++ + P++ + +L+ C +G+ +A L E+L+ G+ D+ L
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+ C E V +A+ L+ + + SYN + G + + +L + G
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507
Query: 587 APNNLTCKYMIHSLWKG 603
PN T ++ K
Sbjct: 508 KPNEFTYTILLRGYCKA 524
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 177/400 (44%), Gaps = 12/400 (3%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG---DVDKVNGFLEKIEEE---GFDPD 274
+D+ ++++E+ + FN L V + G ++V ++ E P+
Sbjct: 30 LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ-LF 333
TY+ LI +C+ GRL F + ++ + +++ + L+ GLC +V EA L
Sbjct: 90 ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
RM G PD+V+YNT+I + +EG+++++ +L EMM GI P+ T ++ G K
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A + ++ GV Y+ LI + +LE + G P Y
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ LCK +A L D M + IKP ++ Y L+ + G E S +D M+
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G+ P+ +I ++ Y + + +A + ++ D S+ A+ + + G +
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL-----WKGMERKF 608
+ + + G PN +++ L W+ E F
Sbjct: 390 AVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELF 429
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + +++ FR+ L G P + + N +L+GL + + ++Y M
Sbjct: 520 GYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKC 579
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+NI+ + CKN VD+ ++ + D VT+N +I + K GR DA L+
Sbjct: 580 DIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLF 639
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++PD+VTY + L +EG + E LF M G +P+ N L+
Sbjct: 640 ATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHR 699
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
G + + LY++ + T +++ Y +
Sbjct: 700 GDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 9/160 (5%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y +I++ L NN A KM L KD F +I A +K G
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCS--KDPQLDSVTFNIMIG-------ALLKGGRKE 633
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ F G P +V+ + L++ + + ++ M + G PN+H N L
Sbjct: 634 DAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALV 693
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
GD+ + +L K++E+ F + T + LIS Y +
Sbjct: 694 RRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSR 733
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 198/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI N LL+ + K+ D + E+M R+GI N +T+NIL + FC+ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + + +LL +M I +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K ALNL E++ GV + Y LI LC R A+ LL +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LING+C K +++ L +++ + +T +Y +
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + G PN +T ++ L K
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 193/395 (48%), Gaps = 1/395 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L NGL + +D ++ M + P+ FN L K D V EK++ G
Sbjct: 57 LRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+L TYN LI+ +C++ +++ A L M + P +VT ++L+NG C ++ +A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD +++ TLI K E+ +L+ M+ G P+ T ++V G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + A NL+ +++ + + IY +I +LC+ A +L + G P++
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC + +DA L +M++R I P++ T+ ALI F G+ EA L DE
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD LING+CM +++A+ + K + +YN + N F +
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ + +EL + + G N +T +IH ++ +
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 199/402 (49%), Gaps = 9/402 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
++ +P + + ++H L +NK S A+ ++ +V+ + C ++ + +++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN------- 233
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K G I +F K + ++V + +++ L K D ++ EM G+ P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L C + L + E +P++VT+N LI ++ K+G+L +A LY
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R++ PD+ TY++L+NG C ++ EA +F M+ + P++V+YNTLI +CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E L EM G+ +T T ++ G+ + +A + ++ GV + Y
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ LC++ + A + E + + P++ YN ++E +CK V D L +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ +KP + Y +I FC G EA +L +M E G LPDS
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 178/356 (50%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K ID + + +M I N ++ +
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK D ++E +G P+++TY++LIS C R +DA L M R +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VT+ L++ KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +P+ T ++ G+ K R+ + L E+ + G+ + Y LI Q
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + +++ DG P++ YN L++ LCK + A+++ + + ++P++ T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
Y +I C G+ + L + G+ PD I +I+G+C + +A+AL
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 206/450 (45%), Gaps = 12/450 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 118 HNLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G ++ AF L M + ++V Y+T+++ LCK +A LF M ++G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++++Y++LI C + ++ LL +M+ I P+ T ++ + KEG+L+ A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L E+ + SI DI+ Y LI C +R A + E + P++ YN L+
Sbjct: 351 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK + + + L EM R + + TY LI F A + +M+ G+ P
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ L++G C + KA + + + +YN + + G + +L
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 579 KRFLRLGFAPNNLTCKYMIHSL-WKGMERK 607
G P+ + MI KG++ +
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 105/180 (58%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N L+NG K ID+ +++ EM + G+ NT T+ L H F + D D
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ +G P+++TYNTL+ CK G+L A ++ + R + P + TY ++ G+CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GKV + LF + +G+ PD++ YNT+I +C++G +E+ +L +M +G PD+ T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 244/485 (50%), Gaps = 14/485 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D +P + + +++ L +N+ A ++L + E+ C ++ LIS
Sbjct: 3 DKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEM--GCVPDDAIYNALIS------- 53
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K ++FK + + P++V+ +++GL K ++ +EM G P
Sbjct: 54 GYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSP 113
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+N++ C+ +D+ LE++ G+ PD+VTYN+ I CK R+++A
Sbjct: 114 NIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA---R 170
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + R V PD+V+YTT++NGLCK G + A ++ +M +RG +PD+V+Y++LI +CK
Sbjct: 171 KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKG 230
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++ + LL M+ G P+ ++ + G + A +++VE++R G + Y
Sbjct: 231 GEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSY 290
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ I LC+ R A ++ +R+ + G P+ Y+ L+E LCK + DA+ L ++ +
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQARE 350
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML-PDSQICRVLINGYCMEKDVN 537
+ + Y L+ C GR EA +L ++L+ + PD V+++ +C + ++
Sbjct: 351 KYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 410
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA + ++ + ++N + + D LS + + GF P+ +T ++
Sbjct: 411 KALQIHKQMLER-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469
Query: 598 HSLWK 602
++ K
Sbjct: 470 DAMCK 474
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 181/386 (46%), Gaps = 3/386 (0%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+D QP + LL GL + N +++ Q+ M +G P+ +N L + K D
Sbjct: 2 IDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDF 61
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ FL ++ + P +VTY ++ CK GR DA L M + P++ TY +
Sbjct: 62 GQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVI 121
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ GLC+E K+ EA ++ M RG PD+V+YN+ I CK ++ E++ L M +
Sbjct: 122 VEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PV 178
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD + ++ G K G L SA ++ ++ G + Y LI C+ A
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL+ + + G P++ YN L+ +L + + A + EM R P + +Y A I C
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
R +A ++ D M+E G P++ +L+ C +K+++ A L+ +K+QI D
Sbjct: 299 KAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFL 582
Y + + + G + L + L
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVL 384
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 237/567 (41%), Gaps = 91/567 (16%)
Query: 98 VLLR--CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
+LLR C+S+ + ++ P + Y ++ + F A K L E+V+
Sbjct: 15 ILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK- 73
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
C +V + +++ K G +++ K + D G P+I + N ++ GL
Sbjct: 74 -NHCLPTVVTYTNIVD-------GLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ +D+ ++ EEM G P+ T+N CK VD+ FL ++ PD+
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDV 182
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF-- 333
V+Y T+I+ CK G L+ A + M R PD+VTY++L++G CK G+V A L
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242
Query: 334 --------------------HRMVH-------------RGLSPDIVSYNTLIFAYCKEGK 360
HR+ H RG +PD+VSYN I CK +
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++++K++ M+ G P+ + ++V+ K+ L A+ LV + + + +Y
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+ R A +L ++ + P + YN +++S CK + AL + +M++R
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER 422
Query: 480 N----------------------------------IKPSLSTYRALICCFCGIGRSGEAV 505
N P TY L+ C G+S A+
Sbjct: 423 NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAAL 482
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L +E ++ G +PD LI G E N AE F K D +NA+ +
Sbjct: 483 ELFEEAVKGGCVPDVVTYSALITGLVHE---NMAEEAYLLFTK----LDVALWNAMILGY 535
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE+G ++L + PN T
Sbjct: 536 AENGSGDLGLKLFVELIESDVEPNART 562
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 138/303 (45%), Gaps = 3/303 (0%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M ++ PD T+ L+ GLC+ ++ +A QL RM G PD YN LI Y K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ L EM+ N P T IV G K GR A+ L+ E++ G S + Y+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ LC++ + A +LE + GY P + YN ++ LCKCD V +A M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P + +Y +I C G A ++D+M G PD LI+G+C +V +A
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL K + +YN++ G + K ++ R GF P+ ++ I L
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 601 WKG 603
K
Sbjct: 298 CKA 300
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/554 (22%), Positives = 236/554 (42%), Gaps = 53/554 (9%)
Query: 26 SASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKP 85
+ + +++++ + K S +Y + N IV+ +C K ++ L + ++
Sbjct: 93 AGRTKDAVKLLDEMRDKGCSPNIYTY-------NVIVEGLCEERKLDEAKKMLEEMAVRG 145
Query: 86 LLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFA 145
P + + S + C+ D V F + + P +Y +++ L + A
Sbjct: 146 YFPDVVTYN-SFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSA 201
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
+ML ++ + C V + LI + K G + + L +G +P++
Sbjct: 202 SRMLDQMTN--RGCTPDVVTYSSLID-------GFCKGGEVERAMGLLDSMLKLGCRPNM 252
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
V+ N LL L +L I + + EM R G P+ ++N CK V K ++
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ E G P+ +Y+ L+ CKK L+DA L + + D++ YT L++GLCK G+
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372
Query: 326 VREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
EA LF +++ + PD+ YN ++ ++CK ++ ++ + +M+ + T
Sbjct: 373 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWN 431
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I+V G + RL A +++ + G Y L+ A+C+ + AA L E +
Sbjct: 432 ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKG 491
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKD----------------------------EM 476
G VP + Y+ L+ L + +A LL E+
Sbjct: 492 GCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVEL 551
Query: 477 VDRNIKPSLSTYRALICCFCGIGRS-GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
++ +++P+ T+ I S G+A L D ++ G PD + LI+ + D
Sbjct: 552 IESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGD 611
Query: 536 VNKAEALLGFFAKK 549
+ +A + F++ K
Sbjct: 612 LEEARRI--FYSMK 623
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/545 (26%), Positives = 236/545 (43%), Gaps = 53/545 (9%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILA--WNNKFSFAMKMLCELVELV 156
LL+ + + SAL+ F+ V S + HIL ++ K + + EL+
Sbjct: 16 LLKSEKNPHSALSIFDSVT---RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72
Query: 157 K-DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNG 214
K CP DV +I AY K + ++ F++ ++ G QP I S N LLN
Sbjct: 73 KCKCPE--DVALTVIK-------AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L++ N D+ + +G+ PN T+NIL + C+ DK L + E+GF PD
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV----------------------- 311
+ +Y TLI+S K G ++DA L+ M R V PD+
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 243
Query: 312 -------------TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+Y ++NGLCK GK E+ +++HRM D+ +Y+TLI C
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + + EM NG+ PD ++ GY + GR+ L L +++ G Y
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-Y 362
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L ++ + A S+ E + + Y L+ LCK + AL + +E +
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
Y ++I C GR E ++D+M + G P+ +C +ING+ +
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A G K +YN + N ++ S+ L K L G+ PN +T +++
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 599 SLWKG 603
L +G
Sbjct: 543 GLCQG 547
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/549 (23%), Positives = 252/549 (45%), Gaps = 17/549 (3%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV-SALT 111
P ++ N +++ + S K ++ L + L P+L + I + + C+ A
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI-LIKISCRKKQFDKAKE 170
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
NW+ + P +Y +++ LA N S A+K+ E+ E + V + LI
Sbjct: 171 LLNWMW-EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE--RGVTPDVACYNILID 227
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
+ K G I + + + + L P+I S N ++NGL K D+ ++++
Sbjct: 228 -------GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + + +T++ L H C +G++D +++ E G PD+V YNT+++ Y + GR
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+ + L+++M + +V+Y L+ GL + KV EA ++ + + D ++Y
Sbjct: 341 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 399
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L+ CK G + ++ S+L E DTF ++ G +EGRL ++ ++ + G
Sbjct: 400 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 459
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + + +I + ++ A + G P++ YN L+ L K + ++A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 519
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM+ + KP++ TY L+ C + A++L + LE G PD ++ ++I+G
Sbjct: 520 ALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 579
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V A L ++ + + ++N + F + D + ++ L+ + N
Sbjct: 580 CSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSN- 638
Query: 591 LTCKYMIHS 599
C YM H+
Sbjct: 639 --CYYMEHT 645
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 217/453 (47%), Gaps = 2/453 (0%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
E VELV DC DLI+ N +K + E+ + + G QP+ +
Sbjct: 178 EAVELV-DCMVLSQHVPDLITLNTIVNGLCLK-DRVSEAVDLIARMMANGCQPNQFTYGP 235
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+LN + K + +M I P+ T+ I+ CK+G +D F ++E +G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
++ TYN+LI S+C GR +D L R M R + P++VT++ L++ L KEGK+ EA
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L++ M+ RG+ P+ ++YN+LI+ C + ++ E+ ++ M+ G PD +T I++ G+
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K ++ + L ++ G+ Y LI CQ + A + + + G P +
Sbjct: 416 CKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGI 475
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L++ LC + +AL + D+M ++ + Y +I C + +A SL
Sbjct: 476 MTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCS 535
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+ G+ D Q ++++G C +++A+AL + D +YN + D
Sbjct: 536 LPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGND 595
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ ++L + R GF+ + T K ++ L G
Sbjct: 596 ITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSG 628
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 194/398 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+++ N L L + D + ++M GI + +T NI+ + FC+ +
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ KI + G++P+ VT+NTL++ C +GR+ +A L M +PDL+T T++NGLC
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ +V EA L RM+ G P+ +Y ++ CK G + LL +M I P T
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
II+ K+GRL AL+ E++ G+ + Y+ LI + C R LL +
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
P++ ++ L++SL K + +A L +EM+ R I+P+ TY +LI C R
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA +MD M+ G PD +LING+C K V+ L + + I DT +Y+ +
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F + L ++ + + G P +T ++ L
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 229/515 (44%), Gaps = 44/515 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT ++ + +LA ++ + LC+ +EL K + + +I+C + +
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLA-LCKQMEL-KGIAYDLYTLNIMINC-------FCRR 138
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ +F K +G++P+ V+ N LLNGL + + ++ + M P+ T
Sbjct: 139 RKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITL 198
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + C V + + ++ G P+ TY +++ CK G A L R M
Sbjct: 199 NTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEH 258
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P +VTYT +++ LCK+G++ +A F M +G+ ++ +YN+LI ++C G+ +
Sbjct: 259 RKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDD 318
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
LL +M+ I P+ T ++ KEG+L A +L E+ G+ + Y+ LI
Sbjct: 319 GAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIY 378
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL----------LLK 473
LC D R A +++ + G P + YN L+ CK V D + ++
Sbjct: 379 GLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA 438
Query: 474 D-------------------------EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
D EMV + + P + TY L+ C G EA+ ++
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGIL 498
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D+M + M D I ++I+G C V+ A +L K D +SYN + + +
Sbjct: 499 DQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKR 558
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
LS+ L ++ G+ P+ T +I + +G
Sbjct: 559 SSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRG 593
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 180/379 (47%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++ M R P FN L + + D V +++E +G DL T N +
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C++ +L AF +++ P+ VT+ TL+NGLC EG+V EA +L MV
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+++ NT++ C + ++ E+ L+ MM NG P+ FT I+ K G SAL+
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ +++ + Y +I LC+D R A S + G ++ YN L+ S C
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
D L +M+ R I P++ T+ ALI G+ EA L +EM+ G+ P++
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI G C +K +++A ++ K D +YN + N F + + M L ++
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431
Query: 582 LRLGFAPNNLTCKYMIHSL 600
G + +T +I
Sbjct: 432 SLRGMIADTVTYSTLIQGF 450
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 200/420 (47%), Gaps = 28/420 (6%)
Query: 102 CQS-DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S ++ SAL +++ +IKP Y +I+ L + + A+ E+ K
Sbjct: 241 CKSGNTASALDLLRKMEHR-KIKPHVVTYTIIIDNLCKDGRLDDALSFFSEME--TKGIK 297
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + LI ++ G + + R + P++V+ + L++ L+K
Sbjct: 298 ANVFTYNSLIG-------SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + +Y EM GI PNT T+N L + C + +D+ N ++ + +G DPD+ TYN
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ +CK +++D L+R M R ++ D VTY+TL+ G C+ K+ A ++F MV +G
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P I++Y L+ C G+++E+ +L +M + D II+ G ++ A
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L L GV Y+ ++ LC+ + A +L ++ +DGY P YN L+ +
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAH 590
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ + + ++ L +EM CG V ++ +ML SG L S
Sbjct: 591 LRGNDITTSVQLIEEMKR-----------------CGFSSDASTVKIVMDMLSSGELDKS 633
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 150/332 (45%), Gaps = 6/332 (1%)
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
D + +Y + S + +DA L++ M R LP ++ + L L + +
Sbjct: 52 DRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLA 111
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L +M +G++ D+ + N +I +C+ K+ + S + ++ G P+T T ++ G
Sbjct: 112 LCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLC 171
Query: 392 KEGRLLSALNLV---VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
EGR+ A+ LV V Q I+ + ++ LC +R A L+ R+ +G P
Sbjct: 172 LEGRVFEAVELVDCMVLSQHVPDLIT---LNTIVNGLCLKDRVSEAVDLIARMMANGCQP 228
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ Y ++ +CK + A AL L +M R IKP + TY +I C GR +A+S
Sbjct: 229 NQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFF 288
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM G+ + LI +C + LL + + +++A+ + ++
Sbjct: 289 SEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKE 348
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G L++ +L + G PN +T +I+ L
Sbjct: 349 GKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 121/278 (43%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K +A LF M+ P ++ +N L + + +L +M GI D +T
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I++ + + +L A + + ++ + G + ++ L+ LC + R F A L++ +
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+VP L N ++ LC D V++A+ L M+ +P+ TY ++ C G + A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L+ +M + P ++I+ C + ++ A + K + +YN++
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGS 309
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F G +L + + PN +T +I SL K
Sbjct: 310 FCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVK 347
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 20/431 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL-----VELVKD 158
SD + L FF + + L I T + Y L+ M+ LC++ ++V D
Sbjct: 87 SDPLLGLKFFEFSRTHLSINHTFNTYDLL-------------MRNLCKVGLNDSAKIVFD 133
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C S + D S E +Y ++G + + + G + S N LLN L+K
Sbjct: 134 CMRSDGILPD-SSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQ 192
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D+ ++ E P+ ++FNIL C+ G++DK F + + G PD+V+Y
Sbjct: 193 NLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252
Query: 279 NTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
NTLI+ +C+ ++ L + M + V PD++TYT++++G CK G ++ A +LF MV
Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMV 312
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ P+ ++N LI + K G M+ + + +M+ G PD T ++ GY +EG +
Sbjct: 313 SSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVN 372
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
L L E++ +S + Y LI ALC++NR A + L + VP IYN ++
Sbjct: 373 QGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVI 432
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ CK V +A + EM ++ +P T+ LI C GR EA+S +M+E +
Sbjct: 433 DGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCV 492
Query: 518 PDSQICRVLIN 528
PD LI+
Sbjct: 493 PDEITINSLIS 503
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 36/335 (10%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK L+ E+ FR+ L+ F P + S N L+ GL ++ ID+ ++ ++ MG G P+
Sbjct: 190 VKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDI 249
Query: 241 HTFNILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCK------------ 287
++N L + FC+ ++ K + L E + +G PD++TY ++IS YCK
Sbjct: 250 VSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFD 309
Query: 288 -----------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
G + A +Y M LPD+VT+T+L++G C+EG
Sbjct: 310 EMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREG 369
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V + +L+ M R LSP++ +Y LI A CKE +++E+++ L + + + P F
Sbjct: 370 EVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYN 429
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ K G++ A +V E+Q + + LI+ C R A S ++ +
Sbjct: 430 PVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEI 489
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
VP N L+ L K +A +K + +
Sbjct: 490 NCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 36/266 (13%)
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
H ++ +Y+ L+ CK G +K + M +GI PD+ +++V Y + G+L
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
SA N + E+ +G+ +S PF +YN L+
Sbjct: 162 SAKNFLNEVHCYGIKVS----------------PF-------------------VYNNLL 186
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
L K + V +A+LL E ++ P + ++ LI C IG +A M G
Sbjct: 187 NMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCF 246
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGF-FAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD LING+C +++K LL K D +Y ++ + + + GD+ E
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + G PN+ T +I K
Sbjct: 307 LFDEMVSSGIKPNDFTFNVLIDGFGK 332
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 144/545 (26%), Positives = 236/545 (43%), Gaps = 53/545 (9%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILA--WNNKFSFAMKMLCELVELV 156
LL+ + + SAL+ F+ V S + HIL ++ K + + EL+
Sbjct: 16 LLKSEKNPHSALSIFDSVT---RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQ 72
Query: 157 K-DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNG 214
K CP DV +I AY K + ++ F++ ++ G QP I S N LLN
Sbjct: 73 KCKCPE--DVALTVIK-------AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNA 123
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L++ N D+ + +G+ PN T+NIL + C+ DK L + E+GF PD
Sbjct: 124 LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPD 183
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV----------------------- 311
+ +Y TLI+S K G ++DA L+ M R V PD+
Sbjct: 184 VFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWE 243
Query: 312 -------------TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+Y ++NGLCK GK E+ +++HRM D+ +Y+TLI C
Sbjct: 244 RLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGS 303
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + + EM NG+ PD ++ GY + GR+ L L +++ G Y
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-Y 362
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L ++ + A S+ E + + Y L+ LCK + AL + +E +
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
Y ++I C GR E ++D+M + G P+ +C +ING+ +
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A G K +YN + N ++ S+ L K L G+ PN +T +++
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 599 SLWKG 603
L +G
Sbjct: 543 GLCQG 547
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/584 (21%), Positives = 252/584 (43%), Gaps = 47/584 (8%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV-SALT 111
P ++ N +++ + S K ++ L + L P+L + I + + C+ A
Sbjct: 112 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI-LIKISCRKKQFDKAKE 170
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
NW+ + P +Y +++ LA N S A+K+ E+ E + V + LI
Sbjct: 171 LLNWMW-EQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE--RGVTPDVACYNILID 227
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
+ K G I + + + + L P+I S N ++NGL K D+ ++++
Sbjct: 228 -------GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + + +T++ L H C +G++D +++ E G PD+V YNT+++ Y + GR
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340
Query: 291 LNDAFYLYRIMYRRN----------------------------VLP------DLVTYTTL 316
+ + L+++M + +LP D +TY L
Sbjct: 341 IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GLCK G + +A + + D +Y+++I C+EG++ E +L +M +G
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ C ++ G+ + +L AL + G + Y+ LI L + R A +
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L++ + G+ P++ Y+ LM LC+ + AL L + +++ KP + + +I C
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ +A+ L EM + +P+ L+ G+ +D +A + + D
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
SYN +S + + G P +T ++ ++
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAV 684
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 177/389 (45%), Gaps = 1/389 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + +++ + G P +V N +LNG L+ I++C ++++ M + G C ++
Sbjct: 304 GNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSY 362
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL +N VD+ E + E+ D +TY L+ CK G LN A +
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
D Y++++NGLC+EG++ E + +M G P+ N +I + + K+++
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ M+ G +P T ++ G K R A LV E+ G + Y L+
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LCQ + A +L + + G+ P ++++N ++ LC V DAL L EM R P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L T+ L+ F + A + D +L+ G PD + + G C ++ A L
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFL 662
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + ++N + ++G L+
Sbjct: 663 NDAVDRGVLPTAITWNILVRAVLDNGALT 691
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+V+ + ++ + F + G P++V+ N L+NGL K + + + +EM G P
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+++L + C+ +D + E+GF PD+ +N +I C G++ DA LY
Sbjct: 533 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 592
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R +P+LVT+ TLM G K A +++ ++ G PDI+SYN + C
Sbjct: 593 SEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSC 652
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ ++ L + + G+ P T I+V+ G L
Sbjct: 653 HRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 20/431 (4%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL-----VELVKD 158
SD + L FF + + L I T + Y L+ M+ LC++ ++V D
Sbjct: 87 SDPLLGLKFFEFSRTHLSINHTFNTYDLL-------------MRNLCKVGLNDSAKIVFD 133
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C S + D S E +Y ++G + + + G + S N LLN L+K
Sbjct: 134 CMRSDGILPD-SSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQ 192
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D+ ++ E P+ ++FNIL C+ G++DK F + + G PD+V+Y
Sbjct: 193 NLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSY 252
Query: 279 NTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
NTLI+ +C+ ++ L + M + V PD++TYT++++G CK G ++ A +LF MV
Sbjct: 253 NTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMV 312
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ P+ ++N LI + K G M+ + + +M+ G PD T ++ GY +EG +
Sbjct: 313 SSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVN 372
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
L L E++ +S + Y LI ALC++NR A + L + VP IYN ++
Sbjct: 373 QGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVI 432
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ CK V +A + EM ++ +P T+ LI C GR EA+S +M+E +
Sbjct: 433 DGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCV 492
Query: 518 PDSQICRVLIN 528
PD LI+
Sbjct: 493 PDEITINSLIS 503
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 36/335 (10%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK L+ E+ FR+ L+ F P + S N L+ GL ++ ID+ ++ ++ MG G P+
Sbjct: 190 VKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDI 249
Query: 241 HTFNILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCK------------ 287
++N L + FC+ ++ K + L E + +G PD++TY ++IS YCK
Sbjct: 250 VSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFD 309
Query: 288 -----------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
G + A +Y M LPD+VT+T+L++G C+EG
Sbjct: 310 EMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREG 369
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V + +L+ M R LSP++ +Y LI A CKE +++E+++ L + + + P F
Sbjct: 370 EVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYN 429
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ K G++ A +V E+Q + + LI+ C R A S ++ +
Sbjct: 430 PVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEI 489
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
VP N L+ L K +A +K + +
Sbjct: 490 NCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 36/266 (13%)
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
H ++ +Y+ L+ CK G +K + M +GI PD+ +++V Y + G+L
Sbjct: 102 HLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLD 161
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
SA N + E+ +G+ +S PF +YN L+
Sbjct: 162 SAKNFLNEVHCYGIKVS----------------PF-------------------VYNNLL 186
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
L K + V +A+LL E ++ P + ++ LI C IG +A M G
Sbjct: 187 NMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCF 246
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGF-FAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD LING+C +++K LL K D +Y ++ + + + GD+ E
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + G PN+ T +I K
Sbjct: 307 LFDEMVSSGIKPNDFTFNVLIDGFGK 332
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 271/576 (47%), Gaps = 30/576 (5%)
Query: 52 LPETQNP-NKIVDLICSSLK----KGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDS 106
+P ++ P IV +C+ L KG S +LK L P L AH ++ ++ D+
Sbjct: 79 VPASREPFQAIVSRVCAILSRVQWKGSS-------ELKQLSPQLKAHHVAEIV-AVHKDT 130
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV- 165
S + FF W+ K + + +++ L + F+ A + + ++K C + ++
Sbjct: 131 ESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIR---ILMIKACRNEEEIR 187
Query: 166 ----FQDLISCTE------DCNWAYVKVG---LIRESFKTFRKTLDVGFQPSIVSCNFLL 212
F + IS CN +++ ++ + +++ L+ G QPS+++ N L+
Sbjct: 188 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 247
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N L K + + + ++ + + P+ T+ L C+N ++D G +++ +EG D
Sbjct: 248 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 307
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ VTY+TLI+ C +GR+++A + M + + P + TYT + LC EA +L
Sbjct: 308 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIEL 367
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
RM RG P++ +Y LI + GK++ + L ++M+ G+ P+T T ++
Sbjct: 368 VARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 427
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR +AL + ++ G + Y+ +I LC A L E++ + G +P++
Sbjct: 428 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 487
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ +V +A L D M + +P TY L+ F G+ A EM+
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G+ P+ LI+G+ + V+ A +LL + + ESYNAV N +++ S
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ ++ + G PN +T +I L + +F
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQF 643
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 193/404 (47%), Gaps = 24/404 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + F++ ++ G P+ VS L++G K +D + E M +G P
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNP 588
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++N + + K + +K+ E+G P+++TY TLI C+ GR AF ++
Sbjct: 589 NVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIF 648
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R LP+L TY++L+ GLC+EGK EA L M +GL+PD V++ +LI +
Sbjct: 649 HDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVL 708
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS-------------------- 398
G++ + LL M+ G P+ T ++++G KE LL
Sbjct: 709 GRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDV 768
Query: 399 ----ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
NL+ + G + D Y L+ LC+ R + A L++ + + G+ P EIY
Sbjct: 769 NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 828
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ + CK V AL + + + + LS YRALIC C G+ EA +L D MLE
Sbjct: 829 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
D + VL++G E +++ LL K + ++Y
Sbjct: 889 EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 932
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 203/419 (48%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G +P++ + + L + ++ ++ M + G PN T+
Sbjct: 324 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTY 383
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + G ++ G K+ +EG P+ VTYN LI+ C GR + A ++ M
Sbjct: 384 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 443
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
L + TY ++ GLC G + +A LF +M+ G P +V+YNTLI Y +G +
Sbjct: 444 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 503
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M NG PD +T +V G+ K G+L SA E+ G++ + Y LI
Sbjct: 504 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLID 563
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+D + A SLLER+ + G P++E YN ++ L K + ++A + D+M ++ + P
Sbjct: 564 GHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLP 623
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY LI C GR+ A + +M + LP+ LI G C E ++AE LL
Sbjct: 624 NVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILL 683
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K D ++ ++ + F G + L +R + +G PN T ++ L K
Sbjct: 684 KEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQK 742
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 192/408 (47%), Gaps = 9/408 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+PT Y L + L A++++ + + + C +V + LIS V
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKK--RGCRPNVQTYTALISGLSRLGKLEV 398
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+GL + K L G P+ V+ N L+N L +++ M G NT
Sbjct: 399 AIGL-------YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 451
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C GD++K EK+ + G P +VTYNTLI+ Y KG +N+A L +M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD TY L++G K GK+ A F MV GL+P+ VSY TLI + K+GK+
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ SLL M G P+ + ++ G KE R A + ++ G+ + Y L
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ R A + + + +P+L Y+ L+ LC+ +A +L EM + +
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P T+ +LI F +GR A L+ M++ G P+ + VL+ G
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 186/414 (44%), Gaps = 33/414 (7%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P +Y ++ + + K A+ +L + E+ C +V+ + +I+
Sbjct: 551 LNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM--GCNPNVESYNAVIN-------GLS 601
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K E+ K K + G P++++ L++GL + ++++ +M + PN +
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + C+ G D+ L+++E +G PD VT+ +LI + GR++ AF L R M
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721
Query: 302 YRRNVLPDLVTYTTLMNGLCKE-----GKVREAHQ-------------------LFHRMV 337
P+ TY+ L+ GL KE KV H+ L RM
Sbjct: 722 VDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS 781
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G P + +Y+TL+ C++G+ E++ L+ +M G PD ++ + K +
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVD 841
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + ++ G + IY LI ALC+ + A +L + + + + ++ L+
Sbjct: 842 HALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L K + + L M +N P++ TY L IG+S E+ L D++
Sbjct: 902 DGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 224/498 (44%), Gaps = 28/498 (5%)
Query: 63 DLICSSLKKGDSHLT---LLQNDLKPLL--PHLGAHEISRVLLRCQSDSVSALTFFNWVK 117
D+I S+++ S+ + L + P++ P L RVL ++ AL F W +
Sbjct: 357 DVISKSIREKPSNFSNYYWLSHQFGPVIVDPDL----FVRVLSSFRTSPRMALRLFRWAE 412
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE---------LVKDCPHS---VDV 165
+ + + +C I+ ILA NN A ++ ++ L+ C S V +
Sbjct: 413 SQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKI 472
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
LI W Y K ++ + F K + P + +CN +L L + + +
Sbjct: 473 LDLLI-------WVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAV 525
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+VY MG GI P T+N L +CK G V + L +++ G P+ VTYN LI+
Sbjct: 526 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 585
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
KKG A L M + + TY L+ G +G + EA L MV +G SP +
Sbjct: 586 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTV 645
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+YN+ I+ CK G+M ++ L +M+ N + PD + ++ GY + G L+ A L E
Sbjct: 646 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 705
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
L+ + + Y+ L+ LC+ A L + +G P + Y L+ CK S
Sbjct: 706 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 765
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
++ A DEM+ ++ Y I +G + A SL +EML G PD I V
Sbjct: 766 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 825
Query: 526 LINGYCMEKDVNKAEALL 543
+++G C ++ +A LL
Sbjct: 826 VVDGLCKLGNLEEASELL 843
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 175/373 (46%), Gaps = 4/373 (1%)
Query: 234 IGICPNTHT----FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
IG C ++ ++L V+ K V++ +K+ + PD+ N ++ K
Sbjct: 460 IGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD 519
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
++ A +YR M + P +VTY TL++ CK GKV++ L M RG +P+ V+YN
Sbjct: 520 LMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYN 579
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI K+G+ +++K L+ EM+ G+ +T ++ GY +G L AL+L E+
Sbjct: 580 VLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLK 639
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G S + Y+ I LC+ R A L + + +P + YN L+ C+ ++ A
Sbjct: 640 GASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKA 699
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
LL DE+ + P++ TY L+ C G A L EM+ G+ PD +L+NG
Sbjct: 700 FLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 759
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C ++ A+ + D+ +Y + GD S+ LQ+ L GF P+
Sbjct: 760 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 819
Query: 590 NLTCKYMIHSLWK 602
+ ++ L K
Sbjct: 820 LIIYNVVVDGLCK 832
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 9/321 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKPT Y ++ K + +L E+ + C + + LI+
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQR--RGCAPNDVTYNVLINGLSKKGEFEQ 593
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
GLI E KT G + S + N L+ G + + + EEM G P
Sbjct: 594 AKGLIGEMLKT-------GLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVA 646
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + CK G + L + PD+V+YNTLI YC+ G L AF L+ +
Sbjct: 647 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 706
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P +VTY TL++GLC++G++ A QL M++ G++PDIV+Y L+ CK G +
Sbjct: 707 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 766
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ EM+ G+ D++ + G K G A +L E+ G IY+ +
Sbjct: 767 SMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 826
Query: 422 IVALCQDNRPFAATSLLERIG 442
+ LC+ A+ LL++ G
Sbjct: 827 VDGLCKLGNLEEASELLQKDG 847
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 215/437 (49%), Gaps = 8/437 (1%)
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+SC N A V+ G + + R++L F + +CN LLN L C + ++ E
Sbjct: 192 VSCNTILN-ALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSL----CTNGEFRKAE 246
Query: 230 EM-GRIGIC--PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+M ++ C N+ T+N + H + K G LE +E + D+ TYN +I C
Sbjct: 247 DMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLC 306
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+ R AF L + M + ++ PD TY TL+NG +EGK+ A +F+ M+ + L P +
Sbjct: 307 RIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVA 366
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y T+I YC+ ++ ++ S+L EM G+ P T ++ GY K L A+ L+ +L
Sbjct: 367 TYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDL 426
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ G++I++ + LI CQ A +L+ + +DG P + Y+ L+ +C+ +
Sbjct: 427 KSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKM 486
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ + M I P+ Y LIC +C G EA+ ++ G++ + I L
Sbjct: 487 HETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNAL 546
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
++ + E + +AE + ++ +D+ S+N + + + G++ + +R G+
Sbjct: 547 LHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGY 606
Query: 587 APNNLTCKYMIHSLWKG 603
+PN T + ++ L +G
Sbjct: 607 SPNVCTYQNLLRGLCQG 623
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 210/438 (47%), Gaps = 36/438 (8%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
G PS ++ + LLNG K++ + + E++ GI N IL FC+ G++ K
Sbjct: 394 TGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISK 453
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L+ + E+G DPD++TY+ LI+ C+ ++++ + M + +LP+ V YTTL+
Sbjct: 454 AKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLIC 513
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
CK G V+EA + F + RGL + V +N L+ A+ +EG + E++ M I
Sbjct: 514 YYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISF 573
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D+ + I+ Y G ++ A ++ ++ R+G S + Y L+ LCQ A +
Sbjct: 574 DSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFM 633
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + +N L+ +C+ ++ +AL L ++M+ N P + TY L+ FC
Sbjct: 634 SCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRK 693
Query: 499 GRSGEAVSLMDEMLESGMLPDSQ-------------------------ICR--------- 524
G+ A+ ++ MLE G++PD+ IC+
Sbjct: 694 GKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIA 753
Query: 525 --VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L+NGY ++VN + ++ + ++ SYN + + + + G SK + L K +
Sbjct: 754 YNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMV 813
Query: 583 RLGFAPNNLTCKYMIHSL 600
R G P+N+T + +I L
Sbjct: 814 RKGIRPDNVTYRLLILGL 831
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 205/426 (48%), Gaps = 3/426 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y G I +F + + G+ P++ + LL GL + + Q Q + I
Sbjct: 584 SYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAI 643
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN L C+ G +D+ EK+ + PD+ TY L+S +C+KG++ A +
Sbjct: 644 DEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL 703
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-HRGLSPDIVSYNTLIFAYCK 357
++M + V+PD V YT L+NGL EG+V+ A +FH ++ GL D ++YN+L+ Y K
Sbjct: 704 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLK 763
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ K ++ +M N +YP++ + I++ GY K G+ +L L + R G+
Sbjct: 764 SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 823
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI+ L + A LE++ +G P +++ L+ + + + +AL + + M
Sbjct: 824 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMK 883
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ PS T+ A+I G + ++ EML+ G+ P+ L+N C +++
Sbjct: 884 WLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEID 943
Query: 538 KAEALLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A L K I E + +++ G L + + + +R G P T +
Sbjct: 944 RAFRLKEEM-KAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTL 1002
Query: 597 IHSLWK 602
+HSL K
Sbjct: 1003 MHSLCK 1008
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 207/481 (43%), Gaps = 44/481 (9%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL 185
S Y I+H +F A LC L ++ +D + DV+ I + C ++
Sbjct: 260 SVTYNTILHWYVKKGRFKAA---LCVLEDMERDSVQA-DVYTYNIMIDKLC-----RIKR 310
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+F ++ P + N L+NG + I+ V+ M R + P+ T+
Sbjct: 311 STRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTT 370
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY------- 298
+ +C+N +DK L +++ G P +TY+ L++ YCK L A YL
Sbjct: 371 MIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRG 430
Query: 299 ----------------------------RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ M+ + PD++TY+ L+NG+C+ K+ E
Sbjct: 431 ITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETK 490
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++ RM G+ P+ V Y TLI YCK G ++E+ ++ G+ + ++ +
Sbjct: 491 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAF 550
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+EG + A + + R +S ++ +I + C A S+ + + + GY P++
Sbjct: 551 YREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNV 610
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L+ LC+ + A ++D T+ AL+ C G EA+ L ++
Sbjct: 611 CTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEK 670
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+++ LPD +L++G+C + + A +L +K + DT +Y + N +G
Sbjct: 671 MIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQ 730
Query: 571 L 571
+
Sbjct: 731 V 731
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 163/316 (51%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ S N L++G +K + +Y+ M R GI P+ T+ +L + G +D F
Sbjct: 784 PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 843
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
LEK+ EG PD + ++ LI+++ +K ++++A ++ M ++ P T++ ++NGL +
Sbjct: 844 LEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIR 903
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G + +H++ H M+ GL P+ Y L+ A C+ G++ + L EM GI P
Sbjct: 904 KGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVA 963
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++G + G+L A+ + + R G+ + + L+ +LC++++ A L +
Sbjct: 964 ESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLME 1023
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ YN L+ LCK ++DAL L EM + + P+++TY L GR
Sbjct: 1024 LCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQ 1083
Query: 503 EAVSLMDEMLESGMLP 518
L++++ E G++P
Sbjct: 1084 NGEELLEDIEERGLIP 1099
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 189/411 (45%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGIC 237
+ + G I + + L+ G P V+ LLNGL+ + V+ E+ + G+
Sbjct: 689 GFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLY 748
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ +N L + + K+ +V+ + + + + P+ +YN L+ Y K+G+ + + YL
Sbjct: 749 ADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 808
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y+ M R+ + PD VTY L+ GL + G + A + +MV G+ PD + ++ LI A+ +
Sbjct: 809 YKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSE 868
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ KM + + M + P + T ++ G ++G L + ++ E+ + G+ +
Sbjct: 869 KSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTH 928
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ A C+ A L E + G VP+ + ++ LC+C + +A+++ M+
Sbjct: 929 YIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMM 988
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P+++T+ L+ C + +A+ L M + D VLI G C +K ++
Sbjct: 989 RSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHIS 1048
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
A L G K + +Y + G + EL + G P
Sbjct: 1049 DALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 166/355 (46%), Gaps = 2/355 (0%)
Query: 238 PNTHT-FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P H F +L + K V + +++ GF V+ NT++++ ++G +
Sbjct: 153 PTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWL 212
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
R R + T L+N LC G+ R+A + +M +S + V+YNT++ Y
Sbjct: 213 FLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYV 271
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K+G+ + + +L +M + + D +T I++ + R A L+ +++ ++
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI ++ + A + + + VPS+ Y +++ C+ + AL + EM
Sbjct: 332 TYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEM 391
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ PS TY AL+ +C + G A+ LM+++ G+ + + +LI+G+C ++
Sbjct: 392 QITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEI 451
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+KA+ +L + D +Y+A+ N + + E+ R + G PN++
Sbjct: 452 SKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 506
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 159/329 (48%), Gaps = 21/329 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P + Y L++ L+ A+K L ++V L P + VF LI+ A+
Sbjct: 817 IRPDNVTYRLLILGLSECGLIDIAVKFLEKMV-LEGIFPDRL-VFDILIT-------AFS 867
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ + + + F + PS + + ++NGL++ +D +V EM ++G+ PN
Sbjct: 868 EKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHT 927
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + C+ G++D+ E+++ G P V +++I C+ G+L +A ++ M
Sbjct: 928 HYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSM 987
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P + T+TTLM+ LCKE K+ +A L M L D+VSYN LI CK+ +
Sbjct: 988 MRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHI 1047
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV--------SI 413
++ L EM G++P+ T + GR+ + L+ +++ G+ ++
Sbjct: 1048 SDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIPAYKQPENL 1107
Query: 414 SRDIYDYLI----VALCQDNRPFAATSLL 438
R + D +I + C+ PF LL
Sbjct: 1108 ERRMEDAIIRLNMIRNCRKEVPFRGVELL 1136
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 156/329 (47%), Gaps = 9/329 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E+ P S++Y +++H +FS ++ + +V K ++ LI +C
Sbjct: 781 EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR--KGIRPDNVTYRLLILGLSEC---- 834
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
GLI + K K + G P + + L+ + + + QV+ M + + P++
Sbjct: 835 ---GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSS 891
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
TF+ + + + G +D + L ++ + G P+ Y L+++ C+ G ++ AF L
Sbjct: 892 KTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 951
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M ++P V ++++ GLC+ GK+ EA +F M+ G+ P + ++ TL+ + CKE K
Sbjct: 952 MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESK 1011
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L M + D + +++ G K+ + AL+L E++ G+ + Y
Sbjct: 1012 IADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYIT 1071
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPS 449
L A+ R LLE I + G +P+
Sbjct: 1072 LTGAMYSTGRVQNGEELLEDIEERGLIPA 1100
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 201/406 (49%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW-- 178
+ T +YC ++H+L ++ K L ++V K + DVF+ ++ T+ ++
Sbjct: 10 RHTLHSYCTMIHLLC-THQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYV 68
Query: 179 ------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + FR T + +C +L L++ W Y+E+
Sbjct: 69 FSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL FCK G++ + I + G P +V++NTLI+ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ PD+ TY+ L+NGLCKEGK+ EA++LF+ M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK K+ + + +M+ G+ PD T ++ G K+G L +L+ E+ G+
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A L ++ Q+ Y L+ LC+ +DA +
Sbjct: 309 PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC S A L+ EM G LP
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 146/271 (53%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G +R + F G +PS+VS N L+NG +KL +D+ +++ M G P+
Sbjct: 146 FCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T++IL + CK G +D+ N ++ + G P+ VT+ TLI +CK +++ A +Y+
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PDL+TY TL+ GLCK+G++++ H L M+ GL PD +SY TLI CKEG
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + L +M+ I D ++ +EGR A ++ E+ G+ Y
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ A+ LL + +DG +P +
Sbjct: 386 MIINEFCKKRDSKTASKLLREMQRDGPLPGV 416
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 110/201 (54%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + F + LD G P+ V+ L++G K +D ++Y++M G+ P+
Sbjct: 218 KEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLI 277
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK G++ +V+ ++++ G PD ++Y TLI CK+G L A L M
Sbjct: 278 TYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKM 337
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++ D V YT L++ LC+EG+ +A ++ M+ GL PD +Y +I +CK+
Sbjct: 338 IQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDS 397
Query: 362 QESKSLLYEMMGNGIYPDTFT 382
+ + LL EM +G P T
Sbjct: 398 KTASKLLREMQRDGPLPGVVT 418
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 35/295 (11%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ LM CKEG++R A +F + GL P +VS+NTLI Y K G + E L M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G PD +T I++ G LC++ +
Sbjct: 199 ASGAQPDVYTYSILING-----------------------------------LCKEGKLD 223
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A L + +G VP+ + L+ CK + V A+ + +M+ + + P L TY LI
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLI 283
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G + L+DEM+ +G+ PD LI+G C E D+ A L ++
Sbjct: 284 YGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIR 343
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
D +Y A+ + +G S ++ + L +G P+N T +I+ K + K
Sbjct: 344 LDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSK 398
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 211/423 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G QP +V+ N ++NG+ + + +M + + T+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + C++G +D +++E +G +VTYN+L+ CK G+ ND L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++P+++T+ L++ KEGK++EA++L+ M+ RG+SP+I++YNTL+ YC + ++ E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++L M+ N PD T +++GY R+ + + + + G+ + Y L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + G +P + Y L++ LC + AL + +++ +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C G+ +A +L + G+ P+ V+I+G C + +++A LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +YN + DGDL+ +L + GF+ + + K +I L
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 591
Query: 604 MER 606
M+R
Sbjct: 592 MKR 594
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 182/379 (48%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P+ F+ + + V F +++E G ++ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C+ + A+ + + + PD T+ TL+ GL EGKV EA L RMV G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V+YN+++ C+ G + LL +M + D FT I+ ++G + +A++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E++ G+ S Y+ L+ LC+ + LL+ + VP++ +N L++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + +A L EM+ R I P++ TY L+ +C R EA +++D M+ + PD
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI GYCM K V+ + +K+ + + +Y+ + F + G + EL +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ G P+ +T ++ L
Sbjct: 430 VSHGVLPDVMTYGILLDGL 448
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 189/397 (47%), Gaps = 16/397 (4%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTL-LQNDLKPLLPHLGAHEISRVLLRCQSDSV--SA 109
P+ N IV+ IC S GD+ L L L ++ S ++ D +A
Sbjct: 191 PDVVTYNSIVNGICRS---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
++ F ++ IK + Y +V L K++ +L ++V ++ +V F L
Sbjct: 248 ISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVL 304
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+ +VK G ++E+ + +++ + G P+I++ N L++G N + + + +
Sbjct: 305 LD-------VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
M R P+ TF L +C VD I + G + VTY+ L+ +C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
++ A L++ M VLPD++TY L++GLC GK+ +A ++F + + IV Y
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T+I CK GK++++ +L + G+ P+ T +++ G K+G L A L+ +++
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
G + + Y+ LI A +D A+ L+E + G+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++ N+ S A ML +V C + F LI Y
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIK-------GYC 379
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
V + + K FR G + V+ + L+ G + I ++++EM G+ P+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C NG ++K E +++ D +V Y T+I CK G++ DA+ L+ +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++TYT +++GLCK+G + EA+ L +M G +P+ +YNTLI A+ ++G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIV 387
S L+ EM G D + ++++
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVI 585
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 204/401 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N +++G K +++ +++EM + GI P+ T++ + H CK +DK F
Sbjct: 219 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAF 278
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ +G PD TYN LI Y G+ +A +++ M R+++LPD+V TLM LCK
Sbjct: 279 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SY ++ Y +G + + L M+G+GI P T
Sbjct: 339 YGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 398
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G VP Y+ L++ C S+ A L E+++ ++ + + ++I C +GR
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ PD+ + +L++GYC+ + KA + + Y +
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 619
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 169/342 (49%), Gaps = 2/342 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+F R+ ++ G P + N L+ G + +V++EM R I P+ N L
Sbjct: 276 EAF--LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK G + + + + +G +PD+ +Y +++ Y KG L D L+ +M +
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P + T+ L+ G + +A +F+ M G+ P +V+Y T+I A C+ GKM ++
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G+ PD + ++QG+ G LL A L+ E+ G+ + + +I LC+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A ++ + G P +YN LM+ C + AL + D MV I+P++
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
Y L+ +C IGR E +SL EML+ G+ P + + ++I+G
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 196/404 (48%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ + + L FC+ D+ ++ L + E G PD+ +YN L+ S C
Sbjct: 136 FGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLC 195
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + PD+V Y T+++G KEG V +A LF MV RG+ PD
Sbjct: 196 NQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 255
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+Y++++ A CK M ++++ L +M+ G+ PD +T ++ GY G+ A+ +
Sbjct: 256 LVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 315
Query: 405 ELQR-------------------FG-VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R +G + +RD++D + + Q+ F+
Sbjct: 316 EMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYTIMLNGYATK 374
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P + +N L+++ C + A+++ +EM D +KP + TY
Sbjct: 375 GCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTY 434
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I C IG+ +A+ ++M++ G++PD LI G+C + KA+ L+
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D + ++ N + L ++M+ Q F + +G P+
Sbjct: 495 NGMRLDIVFFGSIINNLCK---LGRVMDAQNIFDLTVNVGLHPD 535
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 174/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S +LNG C+ +++ M GI P
Sbjct: 338 KYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 397
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G P +VTY T+I++ C+ G+++DA + M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V+PD +V + +++N LCK G+V
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL PD V YN L+ YC GKM+++ + M+ GI P+ +
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y+ +I L + R A + + G
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ Y+ ++ L K +A+ L E+ N+K + T +I R EA
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + SG++P + ++I E V +AE
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLIKEGLVEEAE 731
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 173/402 (43%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVF 166
A+ FN ++ D +KP Y ++ L K AM+ ++++ +V D +
Sbjct: 415 AMIIFNEMR-DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
Q CT G + ++ + + ++ G + IV ++N L KL +
Sbjct: 474 QGF--CTH---------GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P+ +N+L +C G ++K + + G +P++V Y TL++ YC
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M ++ + P + Y +++GL + G+ A FH M G++ +
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y+ ++ K E+ L E+ + D T ++ G + R+ A +L +
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R G+ Y +I L ++ A + + G P + N ++ L K + +
Sbjct: 703 SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 763 VRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 127/321 (39%), Gaps = 38/321 (11%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + D + + L+ G C+ + EA
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SYN L+ + C +GK ++ LL M G PD ++
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIP----------------------------------- 253
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P L Y+ ++ +LCK ++ A +MV++ + P TY LI + G+ EAV +
Sbjct: 254 PDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRV 313
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EM +LPD L+ C + +A + A K Q D SY + N +A
Sbjct: 314 FKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYAT 373
Query: 568 DGDLSKLMELQKRFLRLGFAP 588
G L + +L L G AP
Sbjct: 374 KGCLVDMTDLFDLMLGDGIAP 394
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 199/417 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+F R+ + G P+ +C + L + C + W+++ +M G PN +T+
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C +G + G ++ +G P+ VTYN LI+ + R+ AF + +M R
Sbjct: 359 TALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY ++ G C G ++A + + M+ RG S ++V+YNT+I YC G
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M G PD ++ ++ G+ K ++ SA L E+ G+ + Y LI
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+D + ATSLLE + + G P+++ YN L+ L K ++ + A L M++ I P
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY A+I C G + A+ + ++M+E G LP+ LI E V +AE L
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ I D +Y + + G + R ++ G P T +I L
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 205/421 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G+ + + L G QP+++ N ++N L K + + +++ + P+T
Sbjct: 192 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 251
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ D+D ++ +EG +P+ VTY+TLI+ C GR+N+AF L R M
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+LP T T + LC G +A +LF M ++G P++ +Y LI C G +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGIL 371
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L + M +G++P+T T ++ + R+ A ++ + R G S + Y+ +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C P A ++ + Q G+ +L YN +++ C + AL + D M D
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP +Y LIC FC I + A L +EM++ G+ P+ LI+GYC ++ ++ A +
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL + + ++YN + + + + S EL K + G PN +T MI L
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611
Query: 602 K 602
K
Sbjct: 612 K 612
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 251/556 (45%), Gaps = 26/556 (4%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSE---HKSLSNPLYNFLPETQNPN-- 59
S + + ++F+ L+ S +YS +I S ++ + + L E PN
Sbjct: 157 SKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLL 216
Query: 60 ---KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS-DSVSALTFFNW 115
+++ +C D+ T+++ + + S +L C+ D SAL FN
Sbjct: 217 IYNAVINALCKDGNVADAE-TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 275
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
+ + +P + Y +++ L + + + A ++ E++ ++
Sbjct: 276 MAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI------------LHGILPTAHT 322
Query: 176 CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
C A +G ++++ F + G +P++ + L++GL + ++ M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMS 382
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
R G+ PNT T+N L ++ +N + L + G P++VTYN +I YC G
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A + M +R +LVTY T++ G C G A ++ M G PD SY LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK KM+ + L EM+ +G+ P+ T ++ GY K+ +L +A +L+ ++R G
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y+ LI L + N A L + + ++G P++ Y +++ LCK S + AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++M+++ P+L TY +LI G+ EA +L E+ G++PD +I Y M
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682
Query: 533 EKDVNKAEALLGFFAK 548
V A LG K
Sbjct: 683 SGKVEHAFNFLGRMIK 698
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 183/398 (45%), Gaps = 33/398 (8%)
Query: 163 VDVFQDLISCTEDCNWAYV-------KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+D+ +D C D W+Y K+ + +F F + +D G P+ V+ L++G
Sbjct: 483 LDLMRD-GGCKPD-EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K +D + E M R G PN T+N+L H K + + + EEG P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTY +I CK G + A ++ M + LP+L+TY++L+ L +EGKV EA LF
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ GL PD ++Y +I AY GK++ + + L M+ G P +T ++++G E
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720
Query: 396 L----LSALNLVVELQRFGV--------------------SISRDIYDYLIVALCQDNRP 431
L L+AL VV FG +S + + L+ L R
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
F A LL + G P E YN L+ SL + +V A+ + M + + L+ Y+ L
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
IC C + R EA + ML PD + VLI+G
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 198/462 (42%), Gaps = 37/462 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + D + P + Y +++IL N + +A +L + C ++ + +
Sbjct: 374 AIGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGR--NGCSPNIVTYNE 430
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I Y +G +++ L G ++V+ N ++ G ++
Sbjct: 431 MIK-------GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M G P+ ++ L FCK ++ G ++ ++G P+ VTY LI YCK
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+L+ A L M R P++ TY L++GL K+ A +L M+ G+ P++V+Y
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+I CK G + + +M+ G P+ T +++ G+EG++ A NL EL+R
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ Y +I A + A + L R+ + G P+L Y L++ L +AD
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Query: 469 ALL--LKD---------EMVDRN-----------IKPSLS--TYRALICCFCGIGRSGEA 504
L L D + D++ + P LS AL+ GR EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
L+ M+ G+ PD + L+ C V + +G F
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVF 822
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%)
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M + S L + +G+ F ++ + G + ++ + GV + IY+
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ALC+D A ++++++ + P Y ++ C+ + AL + ++M
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P+ TY LI C GR EA L+ EM+ G+LP + C I C A
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + +Y A+ + G L + L R R G PN +T +I+ L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINIL 400
Query: 601 WKGMERKF 608
+ K+
Sbjct: 401 VENRRIKY 408
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 422 IVALCQDNRPFAAT-SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C A T S L+ + Q G L Y+ L+ L + A + M+
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P+L Y A+I C G +A ++M ++ ES M PD+ +I G+C + D++ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ AK+ +T +Y+ + N + G +++ +L + + G P TC I +L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 17/219 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI-DQCWQVYEEMGRIGIC 237
AY+ G + +F + + G QP++ + L+ GL + DQ + +
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD-----VV 733
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY--NTLISSYCKKGRLNDAF 295
PN +F T D D V+ K+ E DP L N L+S+ GR +A
Sbjct: 734 PNC-SFGYQTT------DQDAVSVMSAKLAE--LDPGLSVQVQNALVSNLSTAGRWFEAN 784
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + + PD Y +L+ L + V A +F M +G + Y LI A
Sbjct: 785 ELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICAL 844
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
C+ + +E++ M+ PD +++ G ++G
Sbjct: 845 CQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 28/233 (12%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF-QDLISCTEDCNWAYV 181
+PT Y +++ L N++ A + L L ++V +C QD +S
Sbjct: 702 QPTLWTYGVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS---------- 749
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICP 238
++ L V Q ++VS L+ + ++ E +G + G+CP
Sbjct: 750 ---VMSAKLAELDPGLSVQVQNALVS---------NLSTAGRWFEANELLGSMISQGLCP 797
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L + +VD G + + +G + L Y LI + C+ R +A +
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
M R PD V L++GL ++G + H M R P Y L
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 202/406 (49%), Gaps = 11/406 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCNWAYVK 182
P + Y +++H L K A+ + ++ E VK P+ V + L+ C Y
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK--PYIV-TYHSLLLC-------YCV 433
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ K + + GF P++V+ L+ G + D+ + + EM + G+ N +T
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L + C G V +V L++ E EGF P +TYN++I+ + K G + AF +Y+ M
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P++VTYT+ ++G CK A ++ + + +GL PDI +YN+LIF +C+EG M
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +L M+ +G+ P+ + GY + AL L ++ + G+ + Y LI
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLI 673
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+D A L + G +P + L LC+ + DA L DEM +I+
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR 733
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P++ Y LI + G+ EA L DEMLE ++PD +L+
Sbjct: 734 PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 203/461 (44%), Gaps = 52/461 (11%)
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ---- 226
CTE+ G+ ++++ R+ D G PS N ++ GLL D+ W+
Sbjct: 326 GCTEE--------GMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN----DKLWKDAVS 373
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++EM GI P+ T+NIL H C+ + + EK+ E G P +VTY++L+ YC
Sbjct: 374 LFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM----------------------------- 317
G +++A LY M + P++VTYTTLM
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 318 ------NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
NGLC G+V E ++ R G P ++YN++I + K G M + ++ +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
GI P+ T + GY K AL ++ +++ G+ Y+ LI CQ+
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A +L + +DG +P++ +YN + + +AL L ++M+ I +TY L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I F G A+ L EM+ G +PD L +G C D++ A LL +
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ YN + N + +G L + L L P++ T
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 203/455 (44%), Gaps = 36/455 (7%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK G + E+ + L G + S+V L++G + + ++EE R G+ P
Sbjct: 258 VKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTD 317
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ +L + G +K ++ + G P +N +I DA L++
Sbjct: 318 VTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE 377
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD TY L++ LC+ K+REA L+ +M G+ P IV+Y++L+ YC G
Sbjct: 378 MADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M E+ L EM G G P+ T +++G+ + A L+ E+++ GVS + Y+
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC R +L+R +G+VP+ YN ++ K + A + +M +
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 481 IKPSLSTYRALI-------CC----------------------------FCGIGRSGEAV 505
I P++ TY + I CC FC G A+
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++ ML+ G+LP+ + I GY K + +A L K+ DT +Y + + F
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGF 676
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++DG+++ ++L + G P+++T + H L
Sbjct: 677 SKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 180/384 (46%), Gaps = 1/384 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ ++ K D ++++EM I P+ ++ CK D ++ L K+++
Sbjct: 181 DVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQD 240
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
GF P T+N+++ K GR+ +A ++ + +V TTLM+G C + +VR+
Sbjct: 241 AGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRK 300
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +F + GL P V+Y LI +EG +++ L +M +G+ P T ++++
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIK 360
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G + A++L E+ G+ + Y+ LI LCQ + A +L E++ + G P
Sbjct: 361 GLLNDKLWKDAVSLFKEMADSGIPDAF-TYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ Y+ L+ C + +A+ L EM + P++ TY L+ +A +L+
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM ++G+ + LING C+ V + +L F + + +YN++ N F +
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 569 GDLSKLMELQKRFLRLGFAPNNLT 592
G + + ++ G PN +T
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVT 563
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 180/443 (40%), Gaps = 36/443 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+ ++ + F + +P C+ + L KL ++ V +M G P
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN + V K G +++ +++ G +V TL+ YC + + A ++
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P VTYT L+ G +EG +A++L +M GL P +N +I +
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ SL EM +GI PD FT I++ + ++ ALNL ++ GV Y L
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
++ C + A L + G+ P++ Y LM+ + A L EM +
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Query: 482 K-----------------------------------PSLSTYRALICCFCGIGRSGEAVS 506
P+ TY ++I F G G A +
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ +M G+ P+ I+GYC + A +L K D +YN++ F
Sbjct: 548 VYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFC 607
Query: 567 EDGDLSKLMELQKRFLRLGFAPN 589
++G++S +++ L+ G PN
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPN 630
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 161/403 (39%), Gaps = 34/403 (8%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ P+ + L V ++ L ++ +G D ++ ++ + K+G +DA
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L+ M + PD + + LCK A + +M G P ++N+++
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
K G+M+E+ + E++ G ++ GY + + AL++ E R G+ +
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI ++ P A L ++ G +PS +N +++ L DA+ L
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376
Query: 475 EMVDRNI----------------------------------KPSLSTYRALICCFCGIGR 500
EM D I KP + TY +L+ C+C G
Sbjct: 377 EMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EAV L EM G P+ L+ G+ + +KA ALL + + +YN
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ N G + ++ E+ KRF GF P +T +I+ K
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 3/274 (1%)
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M RG++PD S L+ + ++ +LL EM G G D + ++++ KEG
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
A+ L E+ + + + I +LC+ A +L ++ G+VP +N
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ L K + +AL +KDE++ K S+ L+ +C +A+ + +E L G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++P VLI G E KA L + T +N V D +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
L K G P+ T +IH W RK +
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIH--WLCQRRKIR 403
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 1/288 (0%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R V PD + T L+ + +A L M +G D ++ ++ A KEG
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ L EM + I PD C + + K AL ++ ++Q G ++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L + R A + + + G S+ + LM C V AL + +E +
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P+ TY LI G +A L +M + G+LP + ++I G +K A
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
+L A I D +YN + + + + + + L ++ G P
Sbjct: 373 SLFKEMADS-GIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 9/480 (1%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P ++ + ++A ++ + LC+ +EL K H++ +I+C C K
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLD-LCKQMEL-KGIAHNLYTLSIMINCCCRCR----K 122
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ L +F K + +G++P V+ + L+NGL + + ++ + M +G P T
Sbjct: 123 LSL---AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + C NG V ++++ E GF P+ VTY ++ CK G+ A L R M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + D V Y+ +++GLCK+G + A LF+ M +G DI+ Y TLI +C G+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL +M+ I PD ++ + KEG+L A L E+ + G+S Y LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++N+ A +L+ + G P++ +N L+ CK + + D L L +M R +
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY LI FC +G+ A L EM+ + PD ++L++G C + KA +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D YN + + + +L G P+ T MI L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 236/507 (46%), Gaps = 11/507 (2%)
Query: 101 RCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
RC+ S++ +K L +P + + +++ L + S A++++ +VE+
Sbjct: 119 RCRKLSLAFSAMGKIIK--LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM----G 172
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H LI+ N + G + ++ + ++ GFQP+ V+ +L + K
Sbjct: 173 HK----PTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
++ +M I + ++I+ CK+G +D ++E +GF D++ Y T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI +C GR +D L R M +R + PD+V ++ L++ KEGK+REA +L M+ RG
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+SPD V+Y +LI +CKE ++ ++ +L M+ G P+ T I++ GY K + L
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L ++ GV Y+ LI C+ + A L + + P + Y L++ L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C AL + +++ ++ + Y +I C + +A L + G+ PD
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ ++I G C + +++A+ L + + +YN + +GD +K +L +
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGMERK 607
R GF+ + T K ++ L G +K
Sbjct: 588 IKRCGFSVDASTVKMVVDMLSDGRLKK 614
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 180/378 (47%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P F+ L V + D V +++E +G +L T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ C+ +L+ AF + + PD VT++TL+NGLC EG+V EA +L RMV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P +++ N L+ C GK+ ++ L+ M+ G P+ T +++ K G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ +++ + + Y +I LC+D A +L + G+ + IY L+ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
D L +M+ R I P + + ALI CF G+ EA L EM++ G+ PD+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+G+C E ++KA +L K + ++N + N + + + +EL ++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 582 LRLGFAPNNLTCKYMIHS 599
G + +T +I
Sbjct: 414 SLRGVVADTVTYNTLIQG 431
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 152/327 (46%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V+Y + S + +DA L++ M R P L+ ++ L + + + + L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M +G++ ++ + + +I C+ K+ + S + +++ G PDT T ++ G EGR
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL LV + G + + L+ LC + + A L++R+ + G+ P+ Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ +CK A A+ L +M +R IK Y +I C G A +L +EM G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
D I LI G+C + LL K+ D +++A+ + F ++G L +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL K ++ G +P+ +T +I K
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCK 364
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 229/462 (49%), Gaps = 17/462 (3%)
Query: 88 PHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK 147
P +HE + L++ ++D AL FN V ++ Y I+H LA + KF
Sbjct: 55 PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 114
Query: 148 MLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL---IRESFKTFRKTLDVGFQPS 204
+L ++ + C +F +L+ + K+ L + E F R V +PS
Sbjct: 115 VLHQMT--YETCKFHEGIFLNLMK-------HFSKLSLHERVVEMFDAIRPI--VREKPS 163
Query: 205 IVSCNFLLNGLLKLNCIDQCWQ-VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ + + LN L++ N +D + + + + PNT FNIL CKNGD+D +
Sbjct: 164 LKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVV 223
Query: 264 EKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNGLC 321
E++++ P+L+TY+TLI+ C GRL +A L+ M ++ +LPD +TY L+NG C
Sbjct: 224 EEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFC 283
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KV A ++ M G +P++ +Y+ L+ +CKEG+++E+K + EM G+ PDT
Sbjct: 284 HGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTV 343
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ + + GR+ A+ L+ +++ ++ ++ LC++ R A +LER+
Sbjct: 344 GYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERL 403
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+G + Y ++ SLC+ + A L M+ R + P +T L+ C G+
Sbjct: 404 PYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKV 463
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
G+AV + +LE G P+ +L+ C E+ + A LL
Sbjct: 464 GDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELL 505
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 176/412 (42%), Gaps = 27/412 (6%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG-RIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P +S +N + + + +++ + + G N T+ + H K+ ++
Sbjct: 54 KPKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAID 113
Query: 261 GFLEKIE------EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
L ++ EG +L+ + + +S + R+ + F R + R P L +
Sbjct: 114 AVLHQMTYETCKFHEGIFLNLMKHFSKLSLH---ERVVEMFDAIRPIVREK--PSLKAIS 168
Query: 315 TLMNGLCKEGKVREAHQ-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
T +N L + +V + L + L P+ +N L+ +CK G + + ++ EM
Sbjct: 169 TCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKK 228
Query: 374 NGI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD-------IYDYLIVAL 425
+ + YP+ T ++ G GRL A+ L E+ +S+D Y+ LI
Sbjct: 229 SHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM------VSKDQILPDALTYNALINGF 282
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C + A ++E + ++G P++ Y+ LM CK + +A + DEM +KP
Sbjct: 283 CHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDT 342
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y LI FC GR EA+ L+ +M E+ D+ V++ G C E +A +L
Sbjct: 343 VGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLER 402
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + SY V N +G+L K +L L G P+ T ++
Sbjct: 403 LPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELL 454
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 130/286 (45%), Gaps = 2/286 (0%)
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS-PDIVSYNTLIFAYCKEGKMQE 363
N+ P+ + L+ CK G + A ++ M +S P++++Y+TLI C G+++E
Sbjct: 195 NLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKE 254
Query: 364 SKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM+ + I PD T ++ G+ ++ AL ++ +++ G + + Y L+
Sbjct: 255 AIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALM 314
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ R A + + + G P Y L+ C+ V +A+ L +M + +
Sbjct: 315 NGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCR 374
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
T+ ++ C GR EA +++ + G+ + R+++N C E ++ KA L
Sbjct: 375 ADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQL 434
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
+G + + + N + E G + + L LGF P
Sbjct: 435 VGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKP 480
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 125/266 (46%), Gaps = 13/266 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--CPHSVDVF 166
A+ F + + +I P + Y +++ K A+K++ E +K C +V +
Sbjct: 255 AIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIM----EFMKKNGCNPNVFNY 310
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
L++ + K G + E+ + F + +G +P V L+N + +D+ +
Sbjct: 311 SALMN-------GFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAME 363
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++M +T TFN++ C+ G ++ G LE++ EG + +Y +++S C
Sbjct: 364 LLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLC 423
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
++G L A L +M R VLP T L+ LC+ GKV +A ++ G P+
Sbjct: 424 REGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPN 483
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMM 372
S+ L+ C+E K+ + LL +++
Sbjct: 484 SWALLVELICRERKLLPAFELLDDLV 509
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 9/480 (1%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P ++ + ++A ++ + LC+ +EL K H++ +I+C C K
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLD-LCKQMEL-KGIAHNLYTLSIMINCCCRCR----K 122
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ L +F K + +G++P V+ + L+NGL + + ++ + M +G P T
Sbjct: 123 LSL---AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + C NG V ++++ E GF P+ VTY ++ CK G+ A L R M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + D V Y+ +++GLCK+G + A LF+ M +G DI+ Y TLI +C G+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL +M+ I PD ++ + KEG+L A L E+ + G+S Y LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++N+ A +L+ + G P++ +N L+ CK + + D L L +M R +
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY LI FC +G+ A L EM+ + PD ++L++G C + KA +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D YN + + + +L G P+ T MI L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 230/504 (45%), Gaps = 33/504 (6%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++ ++ + + + AM EL+ +++ +D + I C K
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAM----ELLRKMEERKIKLDAVKYSIIIDGLC-----K 259
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + +F F + GF+ I+ L+ G D ++ +M + I P+
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F+ L F K G + + +++ + G PD VTY +LI +CK+ +L+ A ++ +M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++ T+ L+NG CK + + +LF +M RG+ D V+YNTLI +C+ GK++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+K L EM+ + PD + +I++ G G AL + ++++ + + IY+ +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+C ++ A L + G P ++ YN ++ LCK S+++A LL +M +
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDE----------------------MLESGMLPDS 520
P+ TY LI G G + ++ L++E ML++G PD
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDV 619
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIY--DTESYNAVFNMFAEDGDLSKLMELQ 578
L+ +C+E++ + +A F K Y + +YN V +S++ +
Sbjct: 620 FTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVL 679
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ G PN +T I L K
Sbjct: 680 DQMFERGCQPNAVTKSTFISGLCK 703
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 212/466 (45%), Gaps = 63/466 (13%)
Query: 118 NDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
N++EIK ++ Y ++ + ++ K+L ++++ + V F LI C
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK--RKITPDVVAFSALIDC-- 326
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+VK G +RE+ + ++ + G P V+ L++G K N +D+ + + M
Sbjct: 327 -----FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G PN TFNIL + +CK +D K+ G D VTYNTLI +C+ G+L A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM---------------VH- 338
L++ M R V PD+V+Y L++GLC G+ +A ++F ++ +H
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 339 -------------------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+G+ PD+ +YN +I CK+G + E+ L +M +G P+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I+++ + EG + L+ E++R G S+ + A S L
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRF-------------ALSTLA 608
Query: 440 RIGQDGYVPSLEIYNELMESLC--KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
R+ + G+ P + + L+ C + SV DA L M KP++ TY +I
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ ++D+M E G P++ I+G C ++D++ + LL
Sbjct: 669 GNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC-KQDLHGSAILL 713
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 180/378 (47%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P F+ L V + D V +++E +G +L T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ C+ +L+ AF + + PD VT++TL+NGLC EG+V EA +L RMV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P +++ N L+ C GK+ ++ L+ M+ G P+ T +++ K G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ +++ + + Y +I LC+D A +L + G+ + IY L+ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
D L +M+ R I P + + ALI CF G+ EA L EM++ G+ PD+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+G+C E ++KA +L K + ++N + N + + + +EL ++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 582 LRLGFAPNNLTCKYMIHS 599
G + +T +I
Sbjct: 414 SLRGVVADTVTYNTLIQG 431
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 152/327 (46%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V+Y + S + +DA L++ M R P L+ ++ L + + + + L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M +G++ ++ + + +I C+ K+ + S + +++ G PDT T ++ G EGR
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL LV + G + + L+ LC + + A L++R+ + G+ P+ Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ +CK A A+ L +M +R IK Y +I C G A +L +EM G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
D I LI G+C + LL K+ D +++A+ + F ++G L +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL K ++ G +P+ +T +I K
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCK 364
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E + + LD+G N +++G+ + +D W ++ + G+ P+ T+NI
Sbjct: 479 IFEKIEKSKMELDIGIY------NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG---------------- 289
+ CK G + + + K+EE+G P+ TYN LI ++ +G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 290 ------RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE--GKVREAHQLFHRMVHRGL 341
L A M + PD+ T+TTL+ C E V +A LF M G
Sbjct: 593 FSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGY 652
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++V+YNT+I + + +L +M G P+ T + G K+ SA+
Sbjct: 653 KPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAIL 712
Query: 402 LVVELQ 407
L+ +++
Sbjct: 713 LLRKME 718
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P + + N ++ GL K + + ++ +M G PN T+NIL GD K
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 260 NGFLEKIEEEGF----------------------DPDLVTYNTLISSYC--KKGRLNDAF 295
+E+I+ GF +PD+ T+ TL+ +C + + DA
Sbjct: 582 AKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAP 641
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L++ M P++VTY T++ GL + + + +M RG P+ V+ +T I
Sbjct: 642 TLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701
Query: 356 CKEGKMQESKSLLYEMMGN 374
CK+ + S LL M N
Sbjct: 702 CKQ-DLHGSAILLLRKMEN 719
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 33/232 (14%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y +I+H + +K A + C L +K V + +I K G + E
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLP--LKGVKPDVKTYNIMIG-------GLCKKGSLSE 545
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC----------- 237
+ FRK + G P+ + N L+ L + ++ EE+ R G
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALS 605
Query: 238 -----------PNTHTFNILTHVFC--KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
P+ TF L FC +N V + ++ G+ P++VTYNT+I
Sbjct: 606 TLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKG 665
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++ + M+ R P+ VT +T ++GLCK+ A L +M
Sbjct: 666 LLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 101/254 (39%), Gaps = 35/254 (13%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWVK 117
N I+ +C++ K D+ LK + P + + I L C+ S+S A F ++
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL-CKKGSLSEADLLFRKME 554
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
D P Y +++ + + K L+E +K C SVD
Sbjct: 555 EDGH-SPNGCTYNILIRAHLGEGDATKSAK----LIEEIKRCGFSVDA------------ 597
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE------EM 231
+R + T + L G +P + F LL+ C+++ VY+ M
Sbjct: 598 ------STLRFALSTLARMLKAGHEPDV----FTFTTLLRPFCLEENASVYDAPTLFKNM 647
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+G PN T+N + + +V G L+++ E G P+ VT +T IS CK+
Sbjct: 648 KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLH 707
Query: 292 NDAFYLYRIMYRRN 305
A L R M N
Sbjct: 708 GSAILLLRKMENDN 721
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 193/382 (50%), Gaps = 20/382 (5%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M +G PN ++N + H + G+++ L+ + +G +PD TY +LIS CK+GR
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L +A L+ M ++P+ VTY TL++G C +G + A MV +G+ P + +YN
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L+ A EG+M E+ ++ EM GI PD T I++ GY + G A +L E+ G
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + Y LI L + NR A L E+I G P + ++N +++ C +V A
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+L EM +++ P T+ L+ C G+ EA L+DEM G+ PD LI+GY
Sbjct: 439 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGY 498
Query: 531 CMEKDVNKA-----EAL-LGFFAKKFQIYDTESYNAVFNMF--AEDGDLSKLMELQKRFL 582
D+ A E L +GF +YNA+ ++GDL++ EL K +
Sbjct: 499 GRRGDIKDAFXVRDEMLSIGFNPTLL------TYNALIKCLCKNQEGDLAE--ELLKEMV 550
Query: 583 RLGFAPNNLTCKYMIHSLWKGM 604
G +P++ T Y+ SL +GM
Sbjct: 551 NKGISPDDST--YL--SLIEGM 568
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 212/438 (48%), Gaps = 7/438 (1%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW-AYVKVG 184
+ +YCL V +LA A+++L +++E + ++F +L + + + +
Sbjct: 126 TKSYCLAVVLLARLPSPKLALQLLKQVME--TRIATNRELFDELTLSRDRLSVKSSIVFD 183
Query: 185 LIRESFKTFRKTLD----VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
L+ K R+ + +GF+P++VS N +++G I+ ++ + M GI P++
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L CK G +++ +G +K+ E G P+ VTYNTLI YC KG L AF
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M ++ ++P + TY L++ L EG++ EA + M +G+ PD ++YN LI Y + G
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + L EM+ GI P T ++ + R+ A +L ++ GVS +++
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I C + A LL+ + + P +N LM+ C+ V +A +L DEM R
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
IKP +Y LI + G +A + DEML G P LI C ++ + AE
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543
Query: 541 ALLGFFAKKFQIYDTESY 558
LL K D +Y
Sbjct: 544 ELLKEMVNKGISPDDSTY 561
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 173/352 (49%)
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + K F+ +E GF P++V+YNT+I Y +G + A + M + + PD TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+L++G+CKEG++ EA LF +MV GL P+ V+YNTLI YC +G ++ + S EM+
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
GI P T ++V EGR+ A +++ E+++ G+ Y+ LI +
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A L + G P+ Y L+ L + + + +A L ++++D+ + P + + A+I
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C G A L+ EM + PD L+ G C E V +A LL +
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
D SYN + + + GD+ ++ L +GF P LT +I L K E
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQE 538
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 180/384 (46%), Gaps = 44/384 (11%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L KP +Y I+H + A ++L + VK + LIS
Sbjct: 202 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM--RVKGIEPDSYTYGSLIS-------G 252
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K G + E+ F K +++G P+ V+ N L++G +++ + +EM + GI P+
Sbjct: 253 MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPS 312
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N+L H G + + + ++++ ++G PD +TYN LI+ Y + G AF L+
Sbjct: 313 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHN 372
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI-------------- 345
M + + P VTYT+L+ L + +++EA LF +++ +G+SPD+
Sbjct: 373 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANG 432
Query: 346 ---------------------VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
V++NTL+ C+EGK++E++ LL EM GI PD +
Sbjct: 433 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYN 492
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ GYG+ G + A + E+ G + + Y+ LI LC++ A LL+ +
Sbjct: 493 TLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 552
Query: 445 GYVPSLEIYNELMESLCKCDSVAD 468
G P Y L+E + D++ +
Sbjct: 553 GISPDDSTYLSLIEGMGNVDTLVE 576
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 152/310 (49%)
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+G+L A M P++V+Y T+++G G + A ++ M +G+ PD +
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y +LI CKEG+++E+ L +M+ G+ P+ T ++ GY +G L A + E+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G+ S Y+ L+ AL + R A +++ + + G +P YN L+ +C +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A L +EM+ + I+P+ TY +LI R EA L +++L+ G+ PD + +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G+C +V +A LL +K D ++N + +G + + L G
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485
Query: 588 PNNLTCKYMI 597
P++++ +I
Sbjct: 486 PDHISYNTLI 495
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 38/280 (13%)
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E ++ +LF + LS D +S + I EGK+++++ + M G G P+ +
Sbjct: 154 ETRIATNRELFDELT---LSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVS 210
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ GY G + A R I D + V
Sbjct: 211 YNTIIHGYSSRGNIEGA---------------RRILDAMRVK------------------ 237
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y L+ +CK + +A L D+MV+ + P+ TY LI +C G
Sbjct: 238 --GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 295
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A S DEM++ G++P +L++ ME + +A+ ++ KK I D +YN +
Sbjct: 296 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 355
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N ++ G+ + +L L G P ++T +I+ L +
Sbjct: 356 NGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSR 395
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL----CKCDSVADALLLKDE-- 475
+V L + P A LL+++ + + E+++EL S K V D L K +
Sbjct: 133 VVLLARLPSPKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKA 192
Query: 476 ------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
M KP++ +Y +I + G A ++D M G+ PDS LI+G
Sbjct: 193 REFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISG 252
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C E + +A L + + + +YN + + + GDL + + ++ G P+
Sbjct: 253 MCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPS 312
Query: 590 NLTCKYMIHSLW 601
T ++H+L+
Sbjct: 313 VSTYNLLVHALF 324
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 213/423 (50%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I F K L G+ P V+ N L+ GL + + ++++ G N
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK GD L+KI+ P++V Y+T+I + CK +++A+ L+
Sbjct: 164 QVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFS 223
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + D+VTY+TL+ G C EGK++EA L + MV + ++P++ +YN L+ A CKEG
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+KS+L M+ + PD T ++ GY + A ++ + GV+ Y
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C++ A +L + + Q VP + Y+ L++ LCK + L DEM DR
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDR 403
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++ TY +LI C G A++L ++M + G+ P++ +L++G C + A
Sbjct: 404 GQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDA 463
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + K + +YN + + + G L + + + + G P+ +T + +I +
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIA 523
Query: 600 LWK 602
L+K
Sbjct: 524 LFK 526
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 166/311 (53%), Gaps = 12/311 (3%)
Query: 118 NDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
+++ +K S++ Y +++ K A+ +L E+V +K +V + L+
Sbjct: 223 SEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV--LKTINPNVYTYNILVD--- 277
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
A K G ++E+ L +P +++ + L++G + + + V+ M +
Sbjct: 278 ----ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM 333
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ P+ HT+ IL + FCKN VD+ +++ ++ P +VTY++LI CK GR+
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ L M+ R +++TY++L++GLCK G + A LF++M +G+ P+ ++ L+
Sbjct: 394 WDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDG 453
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK G++++++ + +++ G + + +T +++ G+ K+G L AL ++ +++ G
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPD 513
Query: 415 RDIYDYLIVAL 425
++ +I+AL
Sbjct: 514 AVTFEIIIIAL 524
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K L+ E++ F + G +V+ + L+ G + + + EM I P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+NIL CK G V + L + + PD++TY+TL+ Y + A +++
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V PD+ TYT L+NG CK V EA LF M + + P IV+Y++LI CK
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ L+ EM G + T ++ G K G L A+ L +++ G+ + +
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+ R A + + + GY ++ YN +++ CK + +AL + +M D
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED 507
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
P T+ +I +G V ++ E
Sbjct: 508 NGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWE 542
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 170/361 (47%), Gaps = 10/361 (2%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+ +A+ + L KP Y I+ L S A + E+ VK V
Sbjct: 178 GDTRAAIKLLQKIDGRL-TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMT--VKGISADV 234
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ LI + + G ++E+ + + P++ + N L++ L K + +
Sbjct: 235 VTYSTLI-------YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
V M + + P+ T++ L + +V K + G PD+ TY LI+
Sbjct: 288 AKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 347
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+CK +++A L++ M+++N++P +VTY++L++GLCK G++ L M RG
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPA 407
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++++Y++LI CK G + + +L +M GI P+TFT I++ G K GRL A +
Sbjct: 408 NVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 467
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+L G ++ Y+ +I C+ A ++L ++ +G +P + ++ +L K
Sbjct: 468 QDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKK 527
Query: 464 D 464
D
Sbjct: 528 D 528
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 131/244 (53%), Gaps = 2/244 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP + + N L+N + I + + ++ + G P+T TF L + C G V+K
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ +GF + V+Y TLI+ CK G A L R + R PD+V Y T+++
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK V +A+ LF M +G+S D+V+YNTLI+ +C GK++E+ LL +M+ I P+
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
Query: 380 TFTCQIIVQGYGKEGR--LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
T I+V KEG+ L +L+++ +++ G + ++ +I AL + + L
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKL 1195
Query: 438 LERI 441
L +
Sbjct: 1196 LHEM 1199
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 2/210 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I +F K L G+ P ++ L+NGL +++ ++++ G N
Sbjct: 971 FCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLN 1030
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK GD L KI+ PD+V YNT+I + CK ++ A+ L+
Sbjct: 1031 QVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFF 1090
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + D+VTY TL+ G C GK++EA L ++MV + ++P++ +YN L+ A CKEG
Sbjct: 1091 EMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEG 1150
Query: 360 K--MQESKSLLYEMMGNGIYPDTFTCQIIV 387
K + ES S+L +M NG + T +II+
Sbjct: 1151 KDLLDESLSMLSKMEDNGCKANAVTFEIII 1180
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 2/256 (0%)
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++E +G PDL T N LI+ +C G++ F + + +R PD +T+TTL+NGLC +
Sbjct: 950 HRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLK 1009
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V +A +++ +G + VSY TLI CK G + + LL ++ G PD
Sbjct: 1010 GQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ K + A L E+ G+S Y+ LI C + A LL ++
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129
Query: 444 DGYVPSLEIYNELMESLCK--CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
P++ YN L+++LCK D + ++L + +M D K + T+ +I +
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189
Query: 502 GEAVSLMDEMLESGML 517
+ L+ EM+ G+L
Sbjct: 1190 DKVEKLLHEMIARGLL 1205
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%)
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L HR+ +G+ PD+ + N LI +C G++ + S+L +++ G +PDT T ++
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G +G++ AL+ +L G +++ Y LI +C+ AA LL +I P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ +YN ++++LCK V+ A L EM + I + TY LI FC +G+ EA+ L+
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124
Query: 509 DEMLESGMLPDSQICRVLINGYCME 533
++M+ + P+ + +L++ C E
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKE 1149
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%)
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+A++L L+ G+ + LI C + S+L +I + GY P + L+
Sbjct: 944 TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC V AL D+++ + + + +Y LI C IG + A+ L+ ++
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD + +I+ C + V+KA L K D +YN + F G L + + L
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + PN T ++ +L K
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCK 1148
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K L+ +++ F + G +V+ N L+ G + + + + +M I P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134
Query: 239 NTHTFNILTHVFCKNGD--VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
N T+NIL CK G +D+ L K+E+ G + VT+ +IS+ +K +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194
Query: 297 LYRIMYRRNVL 307
L M R +L
Sbjct: 1195 LLHEMIARGLL 1205
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 57/138 (41%)
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+V DA+ + M+ P + + ++ F + AVSL + G+ PD
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+LIN +C + ++L K+ DT + N + G + K + + L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 585 GFAPNNLTCKYMIHSLWK 602
GF N ++ +I+ + K
Sbjct: 159 GFQLNQVSYGTLINGVCK 176
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 199/417 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+F R+ + G P+ +C + L + C + W+++ +M G PN +T+
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C +G + G ++ +G P+ VTYN LI+ + R+ AF + +M R
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY ++ G C G ++A + + M+ RG S ++V+YNT+I YC G
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M G PD ++ ++ G+ K ++ SA L E+ G+ + Y LI
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+D + ATSLLE + + G P+++ YN L+ L K ++ + A L M++ I P
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY A+I C G + A+ + ++M+E G LP+ LI E V +AE L
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ I D +Y + + G + R ++ G P T +I L
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 205/421 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G+ + + L G QP+++ N ++N L K + + +++ + P+T
Sbjct: 192 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 251
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ D+D ++ +EG +P+ VTY+TLI+ C GR+N+AF L R M
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+LP T T + LC G +A +LF M ++G P++ +Y LI C G +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L + M +G++P+T T ++ + R+ A ++ + R G S + Y+ +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C P A ++ + Q G+ +L YN +++ C + AL + D M D
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP +Y LIC FC I + A L +EM++ G+ P+ LI+GYC ++ ++ A +
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL + + ++YN + + + + S EL K + G PN +T MI L
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611
Query: 602 K 602
K
Sbjct: 612 K 612
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 251/556 (45%), Gaps = 26/556 (4%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSE---HKSLSNPLYNFLPETQNPN-- 59
S + + ++F+ L+ S +YS +I S ++ + + L E PN
Sbjct: 157 SKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLL 216
Query: 60 ---KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS-DSVSALTFFNW 115
+++ +C D+ T+++ + + S +L C+ D SAL FN
Sbjct: 217 IYNAVINALCKDGNVADAE-TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 275
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
+ + +P + Y +++ L + + + A ++ E++ ++
Sbjct: 276 MAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI------------LHGILPTAHT 322
Query: 176 CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
C A +G ++++ F + G +P++ + L++GL + ++ M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
R G+ PNT T+N L ++ +N + L + G P++VTYN +I YC G
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A + M +R +LVTY T++ G C G A ++ M G PD SY LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK KM+ + L EM+ +G+ P+ T ++ GY K+ +L +A +L+ ++R G
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y+ LI L + N A L + + ++G P++ Y +++ LCK S + AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++M+++ P+L TY +LI G+ EA +L E+ G++PD +I Y M
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682
Query: 533 EKDVNKAEALLGFFAK 548
V A LG K
Sbjct: 683 SGKVEHAFNFLGRMIK 698
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 183/398 (45%), Gaps = 33/398 (8%)
Query: 163 VDVFQDLISCTEDCNWAYV-------KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+D+ +D C D W+Y K+ + +F F + +D G P+ V+ L++G
Sbjct: 483 LDLMRD-GGCKPD-EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K +D + E M R G PN T+N+L H K + + + EEG P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTY +I CK G + A ++ M + LP+L+TY++L+ L +EGKV EA LF
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ GL PD ++Y +I AY GK++ + + L M+ G P +T ++++G E
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720
Query: 396 L----LSALNLVVELQRFGV--------------------SISRDIYDYLIVALCQDNRP 431
L L+AL VV FG +S + + L+ L R
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
F A LL + G P E YN L+ SL + +V A+ + M + + L+ Y+ L
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
IC C + R EA + ML PD + VLI+G
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 198/462 (42%), Gaps = 37/462 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + D + P + Y +++IL N + +A +L + C ++ + +
Sbjct: 374 AIGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGR--NGCSPNIVTYNE 430
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I Y +G +++ L G ++V+ N ++ G ++
Sbjct: 431 MIK-------GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M G P+ ++ L FCK ++ G ++ ++G P+ VTY LI YCK
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+L+ A L M R P++ TY L++GL K+ A +L M+ G+ P++V+Y
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+I CK G + + +M+ G P+ T +++ G+EG++ A NL EL+R
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ Y +I A + A + L R+ + G P+L Y L++ L +AD
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Query: 469 ALL--LKD---------EMVDRN-----------IKPSLS--TYRALICCFCGIGRSGEA 504
L L D + D++ + P LS AL+ GR EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
L+ M+ G+ PD + L+ C V + +G F
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVF 822
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%)
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M + S L + +G+ F ++ + G + ++ + GV + IY+
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ALC+D A ++++++ + P Y ++ C+ + AL + ++M
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P+ TY LI C GR EA L+ EM+ G+LP + C I C A
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + +Y A+ + G L + L R R G PN +T +I+ L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400
Query: 601 WKGMERKF 608
+ K+
Sbjct: 401 VENRRIKY 408
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 422 IVALCQDNRPFAAT-SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C A T S L+ + Q G L Y+ L+ L + A + M+
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P+L Y A+I C G +A ++M ++ ES M PD+ +I G+C + D++ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ AK+ +T +Y+ + N + G +++ +L + + G P TC I +L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 17/219 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI-DQCWQVYEEMGRIGIC 237
AY+ G + +F + + G QP++ + L+ GL + DQ + +
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD-----VV 733
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY--NTLISSYCKKGRLNDAF 295
PN +F T D D V+ K+ E DP L N L+S+ GR +A
Sbjct: 734 PNC-SFGYQTT------DQDAVSVMSAKLAE--LDPGLSVQVQNALVSNLSTAGRWFEAN 784
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + + PD Y +L+ L + V A +F M +G + Y LI A
Sbjct: 785 ELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICAL 844
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
C+ + +E++ M+ PD +++ G ++G
Sbjct: 845 CQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 28/233 (12%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF-QDLISCTEDCNWAYV 181
+PT Y +++ L N++ A + L L ++V +C QD +S
Sbjct: 702 QPTLWTYGVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS---------- 749
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICP 238
++ L V Q ++VS L+ + ++ E +G + G+CP
Sbjct: 750 ---VMSAKLAELDPGLSVQVQNALVS---------NLSTAGRWFEANELLGSMISQGLCP 797
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L + +VD G + + +G + L Y LI + C+ R +A +
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
M R PD V L++GL ++G + H M R P Y L
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 251/543 (46%), Gaps = 47/543 (8%)
Query: 94 EISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSS----NYCL--IVHILAWNNKFSFAMK 147
+I+ L C++ +V+A ++ + PT S N+ L + I ++ FS +
Sbjct: 35 QIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQ 94
Query: 148 MLCELVELVKD-CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
M L L D C ++ L++C CN V +RE F F L G+ P+IV
Sbjct: 95 M--RLSGLSSDRCTLNI-----LLNCL--CN-----VNRLREGFAAFAGILRRGYSPNIV 140
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L+ GL + I + +++ M ++G P+ T+ L C G+++ K+
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN----IALKL 196
Query: 267 EEEGFD----------PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP-------- 308
+E + P+++TYN ++ CK GR ++A L+ M + ++P
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGL 256
Query: 309 --DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
D+VT+ L++ LCKEGKV EA +L M+ G+ PD+V+YN+LI +C G + ++
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L M G PD + +++ GY K ++ A+ L E+ G + YD L+ +
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 376
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A L + G + Y ++ LCK D + +A+ L E+ N K +
Sbjct: 377 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 436
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
LI C G+ A L +++ G P+ ++I+G+C E V+KA L+
Sbjct: 437 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
D +YN + F E L ++++L R + +P+ +TC ++ L K +
Sbjct: 497 EANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK--DE 554
Query: 607 KFQ 609
K+Q
Sbjct: 555 KYQ 557
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 201/412 (48%), Gaps = 16/412 (3%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM------GRIGICPN 239
I E+ + F + +G P +V+ L+ GL I+ ++++EM I PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIE----------EEGFDPDLVTYNTLISSYCKKG 289
T+NI+ CK G D+ E+++ ++G PD+VT+N LI + CK+G
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
++ +A L +M ++PDLVTY +L+ G C G + A +LF M +G PD++SYN
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI Y K K++E+ L EM+ G P+ T +++G G++ A L ++
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 394
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G++ + Y + LC+++ F A L + + +E N L++ LCK + A
Sbjct: 395 GIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETA 454
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +++ + +P++ TY +I FC G+ +A L+ +M +G PD L+ G
Sbjct: 455 WELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRG 514
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ + + LL A+K D + + V +M ++D + + L RF
Sbjct: 515 FYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 566
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 124/238 (52%), Gaps = 3/238 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + E+ K + + L VG +P++++ + LL G+ +D +++ M GI
Sbjct: 339 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 398
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N++T+ I CKN + + +++ F ++ N LI CK G+L A+ L+
Sbjct: 399 NSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELF 458
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ P++VTYT +++G C+EG+V +A+ L +M G +PDI++YNTL+ + +
Sbjct: 459 EKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 518
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K++E LL+ M + PD TC I+V K+ + L+L L RF + D
Sbjct: 519 NKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL---LPRFPIQKGVD 573
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 148/324 (45%), Gaps = 13/324 (4%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D ++P + +++ L K A K+L ++E +V D + + LI
Sbjct: 253 DQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPD----LVTYNSLIE----- 303
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ VG + + + F G +P ++S N L+NG K +++ ++Y EM +G
Sbjct: 304 --GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 361
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T++ L G VD ++ G + TY + CK L +A
Sbjct: 362 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 421
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L+ + N ++ L++GLCK GK+ A +LF ++ + G P++V+Y +I +C
Sbjct: 422 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 481
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+EG++ ++ L+ +M NG PD T +++G+ + +L + L+ + + VS
Sbjct: 482 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541
Query: 417 IYDYLIVALCQDNRPFAATSLLER 440
++ L +D + LL R
Sbjct: 542 TCSIVVDMLSKDEKYQECLHLLPR 565
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 181/350 (51%), Gaps = 3/350 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + FR+ +D+G +P++++ ++ GL K I Q +++ EEM G PN +T
Sbjct: 254 GYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTH 313
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G +K FL+ + E P+++TY +IS YC++ +LN A L M
Sbjct: 314 TSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMK 373
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ ++P+ TYTTL++G CK G A+ L + M G SP++ +YN ++ CK G++Q
Sbjct: 374 EQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ 433
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ +L + NG+ PD FT I++ + K+ + AL L ++ + G+ Y LI
Sbjct: 434 EAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLI 493
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++NR + E + G +P+ + Y ++ C+ ++ A+ + D
Sbjct: 494 AVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCA 553
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV-LINGYC 531
P TY A+I C + EA SL D M+E G++P ++ R+ L YC
Sbjct: 554 PDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP-CEVTRITLAYEYC 602
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 220/429 (51%), Gaps = 1/429 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ +VG ++E+ + + + G P+ + N+++ ++ ++ ++EEM G+ P
Sbjct: 144 SFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQP 203
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ ++ ++ ++CK G++ + + +L + E GF D T+ +IS + KG A + +
Sbjct: 204 DSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + + P+L+ +T ++ GLCK G +++A ++ MV +G P++ ++ +LI CK+
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKK 323
Query: 359 GKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G +++ L +++ + + P+ T ++ GY +E +L A L+ ++ G+ + +
Sbjct: 324 GWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNT 383
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C+ A L+ + +G+ P+L YN ++ LCK V +A + ++
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGF 443
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+KP TY L+ C +A++L ++ML+ G+ PD LI +C E +
Sbjct: 444 QNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMK 503
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
++E + I ++Y ++ + +G+L+ M+ R G AP+++T +I
Sbjct: 504 ESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAII 563
Query: 598 HSLWKGMER 606
L K +R
Sbjct: 564 SGLCKQSKR 572
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 1/364 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+G I E+ K L+ GF + +++ + + + +G+ PN
Sbjct: 215 YCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPN 274
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY- 298
F + CK G + + LE++ +G+ P++ T+ +LI CKKG AF L+
Sbjct: 275 LINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFL 334
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+++ N P+++TYT +++G C+E K+ A L RM +GL P+ +Y TLI +CK
Sbjct: 335 KLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKA 394
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + L+ M G P+ T IV G K GR+ A ++ + + G+ + Y
Sbjct: 395 GNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTY 454
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ C+ A +L ++ + G P + Y L+ C+ + + ++ + +E V
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 514
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P+ TY ++IC +C G A+ + + G PDS +I+G C + ++
Sbjct: 515 IGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDE 574
Query: 539 AEAL 542
A +L
Sbjct: 575 ARSL 578
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 11/344 (3%)
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
+ AL +F + D+ ++P N+ ++ L A +ML E+V K +V
Sbjct: 256 TTRALWYFRRLV-DMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVG--KGWKPNVYT 312
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQC 224
LI K G ++F+ F K + +P++++ +++G + + +++
Sbjct: 313 HTSLID-------GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRA 365
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ M G+ PNT+T+ L CK G+ ++ + + EGF P+L TYN +++
Sbjct: 366 EMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNG 425
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK+GR+ +A+ + ++ + PD TY LM+ CK+ +R+A LF++M+ G+ PD
Sbjct: 426 LCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPD 485
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
I SY TLI +C+E +M+ES+ E + GI P T ++ GY +EG L A+
Sbjct: 486 IHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH 545
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
L G + Y +I LC+ ++ A SL + + + G VP
Sbjct: 546 RLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 1/313 (0%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ S+ + GRL +A + M+ + ++P+ T ++ + G V A LF M RG
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ PD +SY ++ YCK G + E+ L M+ G D T +I+ + +G AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L G+ + + +I LC+ A +LE + G+ P++ + L++ L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
Query: 461 CKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK A L ++V N KP++ TY A+I +C + A L+ M E G++P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ LI+G+C + +A L+ + + + +YNA+ N + G + + ++ +
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
Query: 580 RFLRLGFAPNNLT 592
+ G P+ T
Sbjct: 441 DGFQNGLKPDKFT 453
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
IG + E+ ++ES + + +A+ + EM ++ + P+ T +I +G
Sbjct: 126 IGNRNSEKACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGL 185
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L +EM G+ PDS RV++ YC ++ +A+ L ++ + D ++
Sbjct: 186 VEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTL 245
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPN--NLTCKYMIHSLWK 602
+ + F+ G ++ + +R + +G PN N TC MI L K
Sbjct: 246 IISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTC--MIEGLCK 287
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 211/423 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G QP +V+ N ++NG+ + + +M + + T+
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + C++G +D +++E +G +VTYN+L+ CK G+ ND L + M
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++P+++T+ L++ KEGK++EA++L+ M+ RG+SP+I++YNTL+ YC + ++ E
Sbjct: 282 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 341
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++L M+ N PD T +++GY R+ + + + + G+ + Y L+
Sbjct: 342 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + G +P + Y L++ LC + AL + +++ +
Sbjct: 402 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C G+ +A +L + G+ P+ V+I+G C + +++A LL
Sbjct: 462 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +YN + DGDL+ +L + GF+ + + K +I L
Sbjct: 522 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 581
Query: 604 MER 606
M+R
Sbjct: 582 MKR 584
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 182/379 (48%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P+ F+ + + V F +++E G ++ T N +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C+ + A+ + + + PD T+ TL+ GL EGKV EA L RMV G
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V+YN+++ C+ G + LL +M + D FT I+ ++G + +A++
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E++ G+ S Y+ L+ LC+ + LL+ + VP++ +N L++
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + +A L EM+ R I P++ TY L+ +C R EA +++D M+ + PD
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI GYCM K V+ + +K+ + + +Y+ + F + G + EL +
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ G P+ +T ++ L
Sbjct: 420 VSHGVLPDVMTYGILLDGL 438
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 139/267 (52%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+VK G ++E+ + +++ + G P+I++ N L++G N + + + + M R P+
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TF L +C VD I + G + VTY+ L+ +C+ G++ A L++
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M VLPD++TY L++GLC GK+ +A ++F + + IV Y T+I CK G
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++++ +L + G+ P+ T +++ G K+G L A L+ +++ G + + Y+
Sbjct: 478 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYN 537
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGY 446
LI A +D A+ L+E + G+
Sbjct: 538 TLIRAHLRDGDLTASAKLIEEMKSCGF 564
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++ N+ S A ML +V C + F LI Y
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIK-------GYC 369
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
V + + K FR G + V+ + L+ G + I ++++EM G+ P+
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C NG ++K E +++ D +V Y T+I CK G++ DA+ L+ +
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++TYT +++GLCK+G + EA+ L +M G +P+ +YNTLI A+ ++G +
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIV 387
S L+ EM G D + ++++
Sbjct: 550 TASAKLIEEMKSCGFSADASSIKMVI 575
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
A L++ M +R + P+ +TY++L++G CKE ++ EA+Q+ MV +G S
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDS 766
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 307 LP-DLVTYTTLMNGLCKEGK---VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
LP D V Y + + G+ V A +L M+ RG++P+ ++Y++LI +CKE ++
Sbjct: 692 LPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLD 751
Query: 363 ESKSLLYEMMGNG 375
E+ +L M+ G
Sbjct: 752 EANQMLDLMVTKG 764
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 230/521 (44%), Gaps = 46/521 (8%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++++ + S A+ L +++ C S+ F +I+ A+
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIK--NGCKPSLITFSTIIT-------AFCN 360
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ K F +VG P++ N L++G K + Q +YEEM GI P+ T
Sbjct: 361 EGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGAT 420
Query: 243 FNILTHV-----------------------------------FCKNGDVDKVNGFLEKIE 267
FNIL C G +D+ FLE +
Sbjct: 421 FNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDML 480
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E+G P +V +N++I++Y + G ++A Y+IM ++P T ++++ GL K+G+++
Sbjct: 481 EKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQ 540
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L ++M+ +GL + V++ L+ Y K G + SL YEM GI PD +
Sbjct: 541 EARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFI 600
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G K G + A E+ + G + +Y+ LI LC + A L + Q G +
Sbjct: 601 DGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLL 660
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + N ++ CK + A EM + P TY LI +C + A
Sbjct: 661 PDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEF 720
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+++M SG PD + I G+C + +++A +L + +T +YN + N
Sbjct: 721 LNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT 780
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMI-HSLWKGMERK 607
D L + M L + L++ F PN +T ++ H +GM K
Sbjct: 781 DM-LDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEK 820
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 223/503 (44%), Gaps = 12/503 (2%)
Query: 108 SALTFFNWV-KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV--KDCPHSVD 164
SA FF +ND + T + C+ HILA + A ++ ++ + H V+
Sbjct: 138 SAFAFFKLAFQNDSD--ATVHSCCIAAHILAAESLQLLAQDVISWVIRRIGASRSAHLVE 195
Query: 165 V-------FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
++ S ++ + ES + + +VG +PS + + L LL+
Sbjct: 196 FMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLR 255
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ W++ M R G P H FNI+ FC+ G + L + + +PD+
Sbjct: 256 VGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYA 315
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN LI++Y +GR +DA +M + P L+T++T++ C EG V EA ++F +
Sbjct: 316 YNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQ 375
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
GLSP++ YNTL+ Y K + ++ L EM GI PD T I+V G K G+
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEA 435
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+ L + + +YD + LC + A LE + + G PS+ +N ++
Sbjct: 436 DSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVI 495
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ + +A M+ + PS ST +++ GR EA L+ +M++ G+
Sbjct: 496 AAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLP 555
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+ VL++GY D A +L + D +++A + ++ G + + E
Sbjct: 556 VNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEA 615
Query: 578 QKRFLRLGFAPNNLTCKYMIHSL 600
+ GF PNN +IH L
Sbjct: 616 FSEMSKKGFVPNNFVYNSLIHGL 638
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 187/394 (47%), Gaps = 12/394 (3%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F +W + L P S Y + V L W + AM+ L +++E K P SV F +I+
Sbjct: 441 FRDWSLSSL--VPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLE--KGMPPSVVAFNSVIA 496
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
AY + G + K ++ L G PS +C+ +L GL K + + + +M
Sbjct: 497 -------AYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKM 549
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ N F +L + K GD + ++E G PD + ++ I K G +
Sbjct: 550 IDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLV 609
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+A+ + M ++ +P+ Y +L++GLC GK+ EA +L M +GL PDI + N +
Sbjct: 610 EEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNII 669
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I +CKEG+M+ + EM G+ PDT T ++ GY K ++SA + ++ G
Sbjct: 670 INGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGW 729
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
Y+ I C + A ++L+ + G VP+ YN +M ++C D + A++
Sbjct: 730 DPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCT-DMLDRAMV 788
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
L +++ P++ T L+ FC G +A+
Sbjct: 789 LTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKAL 822
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 141/332 (42%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
++ D NTL+ + ++ + M V P + L L + G
Sbjct: 204 YESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVW 263
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L M+ G P ++N +I +C++G ++ ++SLL+ M PD + I++ Y
Sbjct: 264 KLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAY 323
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
GR AL + + + G S + +I A C + A + E I + G P++
Sbjct: 324 RIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNV 383
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+YN LM K V A +L +EM D+ I P +T+ L+ G+ ++ L +
Sbjct: 384 AMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRD 443
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
S ++PD + V + G C +++A L +K ++N+V ++ G
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K L G P++ TC M+ L K
Sbjct: 504 EDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSK 535
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 208/418 (49%), Gaps = 11/418 (2%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-------GRIGICPNTHTFN 244
FR+ ++G+ P + S N L+ GL C+++ Q E+ G PN +++
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGL----CVEKKSQEALELLLHMTADGGYNCSPNVVSYS 207
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
+ F K G+VDK +++ +GF PD+VTY++LI CK +N A + + M+ +
Sbjct: 208 TIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDK 267
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
V+P+ TY ++ G C G++ EA +L +M GL PD+V+Y LI YCK G+ E+
Sbjct: 268 GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEA 327
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+S+ M+ G P++ I++ GY +G L+ +L+ + R G+ ++ LI A
Sbjct: 328 RSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICA 387
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ A + + Q+G P + Y+ ++ LCK V DA+ ++MV + P+
Sbjct: 388 YAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPN 447
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ ++ +LI C IG + L EM+ G+ PD+ +++ C E V +A+
Sbjct: 448 IISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFD 507
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ SYN + + + G + + ++ R + +G P++ T +++ +K
Sbjct: 508 MVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFK 565
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 195/429 (45%), Gaps = 35/429 (8%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+G E+ F + G +P+ + LL+G + + + M R GI
Sbjct: 318 YCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFE 377
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
FNIL + K+G VDK ++ + G PD+V+Y+T+I CK GR+ DA Y +
Sbjct: 378 HRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFN 437
Query: 300 IMYRRNVLPDLVTYTTLMNGLC-----------------------------------KEG 324
M + P+++++T+L++GLC KEG
Sbjct: 438 QMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 497
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+V EA F ++H G+ P++VSYNTLI YC GKM ES M+ G+ PD++T
Sbjct: 498 RVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYN 557
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ GY K GR+ AL L E+ R V + ++ L Q R AA L ++
Sbjct: 558 ALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR 617
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G +E YN ++ LC+ V +AL + +++ + + + T+ +I +GR EA
Sbjct: 618 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEA 677
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
SL M+ G +P ++I E + +++ L K D+ N +
Sbjct: 678 KSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRR 737
Query: 565 FAEDGDLSK 573
E GD+ +
Sbjct: 738 LLEKGDVRR 746
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 194/407 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + +++ F + + GF P +V+ + L++GL K +++ + + M G+ P
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+NI+ +C G +++ L+K+ G PD+VTY LI YCK GR +A ++
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P+ Y L++G +G + + L M+ G+ + ++N LI AY K
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKH 391
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ + EM NG+ PD + ++ K GR+ A+ ++ G+S + +
Sbjct: 392 GAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISF 451
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC L + G P N +M++LCK V +A D ++
Sbjct: 452 TSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIH 511
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KP++ +Y LI +C +G+ E++ D M+ G+ PDS L+NGY V
Sbjct: 512 IGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVED 571
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
A AL +K + + N + + + G + EL + + G
Sbjct: 572 ALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRG 618
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 201/422 (47%), Gaps = 2/422 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +G + E+ + +K G QP +V+ L+ K+ + V++ M R G P
Sbjct: 282 GYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKP 341
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ ++IL H + G + V L+ + +G + +N LI +Y K G ++ A +
Sbjct: 342 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 401
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+V+Y+T+++ LCK G+V +A F++MV GLSP+I+S+ +LI C
Sbjct: 402 TEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSI 461
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+ ++ + L +EM+ GI+PD I+ KEGR++ A + + GV + Y
Sbjct: 462 GEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSY 521
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C + + +R+ G P YN L+ K V DAL L EM
Sbjct: 522 NTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFR 581
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++K T ++ GR A L +M++ G + ++ G C V++
Sbjct: 582 KDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDE 641
Query: 539 AEALL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + +K+F++ D ++N V N + G + + L + G P+ +T MI
Sbjct: 642 ALRMFEDLRSKEFEL-DVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMI 700
Query: 598 HS 599
S
Sbjct: 701 KS 702
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 204/422 (48%), Gaps = 11/422 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD-CPHSVDVFQDLISCTEDCNWAYV 181
KP S+ Y +++H A ++ L +L +++D P F LI AY
Sbjct: 340 KPNSTIYHILLHGYATKGAL-IDVRDLLDL--MIRDGIPFEHRAFNILIC-------AYA 389
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F + G +P +VS + +++ L K+ ++ + +M G+ PN
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+F L H C G+ KV ++ G PD + NT++ + CK+GR+ +A + ++
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P++V+Y TL++G C GK+ E+ + F RMV GL PD +YN L+ Y K G++
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +L EM + T II+ G + GR+++A L +++ G + + Y+ +
Sbjct: 570 EDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 629
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+++ A + E + + + +N ++ +L K + +A L MV R
Sbjct: 630 LGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGP 689
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + TY +I G E+ L M ++G DS + V+I + DV +A
Sbjct: 690 VPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGT 749
Query: 542 LL 543
L
Sbjct: 750 YL 751
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 153/326 (46%), Gaps = 4/326 (1%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL-FHRMVHR 339
LI +C GRL+ AF + + + VT L+ GLC + +A + F RM
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY---PDTFTCQIIVQGYGKEGRL 396
G +PD+ SYN LI C E K QE+ LL M +G Y P+ + I+ G+ KEG +
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEV 219
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L E+ G Y LI LC+ A ++L+ + G +P+ YN +
Sbjct: 220 DKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIM 279
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ C + +A+ L +M ++P + TY LI +C IGR EA S+ D M+ G
Sbjct: 280 IRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ 339
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+S I +L++GY + + LL + ++ ++N + +A+ G + K M
Sbjct: 340 KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMT 399
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G P+ ++ +IH L K
Sbjct: 400 AFTEMRQNGLRPDVVSYSTVIHILCK 425
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 132/265 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F + +G +P++VS N L++G + +D+ + ++ M IG+ P++
Sbjct: 495 KEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSW 554
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + + KNG V+ ++ + +T N ++ + GR+ A LY M
Sbjct: 555 TYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + TY T++ GLC+ V EA ++F + + D+ ++N +I A K G++
Sbjct: 615 VDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRI 674
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+KSL M+ G P T ++++ +EG L + +L + +++ G + + + +
Sbjct: 675 DEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVI 734
Query: 422 IVALCQDNRPFAATSLLERIGQDGY 446
I L + A + L +I + +
Sbjct: 735 IRRLLEKGDVRRAGTYLTKIDEKNF 759
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 116/244 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y VG + ES K F + + +G +P + N LLNG K ++ +Y EM R +
Sbjct: 527 GYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKF 586
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T NI+ H + G + K+ + G + TYNT++ C+ +++A ++
Sbjct: 587 CAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMF 646
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + D+ T+ ++N L K G++ EA LF MV RG P +++Y+ +I + +E
Sbjct: 647 EDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEE 706
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ES L M NG D+ +I++ ++G + A + ++ S+
Sbjct: 707 GLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTA 766
Query: 419 DYLI 422
LI
Sbjct: 767 ALLI 770
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I + + + K +D G Q I + N +L GL + +C+D+ +++E++ +
Sbjct: 600 QAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVW 659
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNI+ + K G +D+ + G P ++TY+ +I S ++G L ++ L+ M
Sbjct: 660 TFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSM 719
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ D ++ L ++G VR A ++ + S + S L+ E K
Sbjct: 720 EKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVE-ASTAALLIPIVSEKKY 778
Query: 362 QESKSLLYE 370
Q+ L E
Sbjct: 779 QKEVKFLPE 787
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 53/110 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A +KVG I E+ F + G P +++ + ++ ++ +++ ++ M + G
Sbjct: 667 ALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAA 726
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
++H N++ + GDV + +L KI+E+ F + T LI +K
Sbjct: 727 DSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEK 776
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 199/417 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+F R+ + G P+ +C + L + C + W+++ +M G PN +T+
Sbjct: 299 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 358
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C +G + G ++ +G P+ VTYN LI+ + R+ AF + +M R
Sbjct: 359 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 418
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY ++ G C G ++A + + M+ RG S ++V+YNT+I YC G
Sbjct: 419 NGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 478
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M G PD ++ ++ G+ K ++ SA L E+ G+ + Y LI
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 538
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+D + ATSLLE + + G P+++ YN L+ L K ++ + A L M++ I P
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 598
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY A+I C G + A+ + ++M+E G LP+ LI E V +AE L
Sbjct: 599 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ I D +Y + + G + R ++ G P T +I L
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 205/421 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G+ + + L G QP+++ N ++N L K + + +++ + P+T
Sbjct: 192 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 251
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ D+D ++ +EG +P+ VTY+TLI+ C GR+N+AF L R M
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+LP T T + LC G +A +LF M ++G P++ +Y LI C G +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L + M +G++P+T T ++ + R+ A ++ + R G S + Y+ +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C P A ++ + Q G+ +L YN +++ C + AL + D M D
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP +Y LIC FC I + A L +EM++ G+ P+ LI+GYC ++ ++ A +
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL + + ++YN + + + + S EL K + G PN +T MI L
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611
Query: 602 K 602
K
Sbjct: 612 K 612
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 251/556 (45%), Gaps = 26/556 (4%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSE---HKSLSNPLYNFLPETQNPN-- 59
S + + ++F+ L+ S +YS +I S ++ + + L E PN
Sbjct: 157 SKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLL 216
Query: 60 ---KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS-DSVSALTFFNW 115
+++ +C D+ T+++ + + S +L C+ D SAL FN
Sbjct: 217 IYNAVINALCKDGNVADAE-TIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQ 275
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
+ + +P + Y +++ L + + + A ++ E++ ++
Sbjct: 276 MAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI------------LHGILPTAHT 322
Query: 176 CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
C A +G ++++ F + G +P++ + L++GL + ++ M
Sbjct: 323 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 382
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
R G+ PNT T+N L ++ +N + L + G P++VTYN +I YC G
Sbjct: 383 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A + M +R +LVTY T++ G C G A ++ M G PD SY LI
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK KM+ + L EM+ +G+ P+ T ++ GY K+ +L +A +L+ ++R G
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y+ LI L + N A L + + ++G P++ Y +++ LCK S + AL +
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++M+++ P+L TY +LI G+ EA +L E+ G++PD +I Y M
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682
Query: 533 EKDVNKAEALLGFFAK 548
V A LG K
Sbjct: 683 SGKVEHAFNFLGRMIK 698
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 183/398 (45%), Gaps = 33/398 (8%)
Query: 163 VDVFQDLISCTEDCNWAYV-------KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+D+ +D C D W+Y K+ + +F F + +D G P+ V+ L++G
Sbjct: 483 LDLMRD-GGCKPD-EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 540
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K +D + E M R G PN T+N+L H K + + + EEG P++
Sbjct: 541 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTY +I CK G + A ++ M + LP+L+TY++L+ L +EGKV EA LF
Sbjct: 601 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 660
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ GL PD ++Y +I AY GK++ + + L M+ G P +T ++++G E
Sbjct: 661 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 720
Query: 396 L----LSALNLVVELQRFGV--------------------SISRDIYDYLIVALCQDNRP 431
L L+AL VV FG +S + + L+ L R
Sbjct: 721 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 780
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
F A LL + G P E YN L+ SL + +V A+ + M + + L+ Y+ L
Sbjct: 781 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 840
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
IC C + R EA + ML PD + VLI+G
Sbjct: 841 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 878
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 198/462 (42%), Gaps = 37/462 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + D + P + Y +++IL N + +A +L + C ++ + +
Sbjct: 374 AIGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAFVVLNLMGR--NGCSPNIVTYNE 430
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I Y +G +++ L G ++V+ N ++ G ++
Sbjct: 431 MIK-------GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M G P+ ++ L FCK ++ G ++ ++G P+ VTY LI YCK
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 543
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+L+ A L M R P++ TY L++GL K+ A +L M+ G+ P++V+Y
Sbjct: 544 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 603
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+I CK G + + +M+ G P+ T +++ G+EG++ A NL EL+R
Sbjct: 604 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 663
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ Y +I A + A + L R+ + G P+L Y L++ L +AD
Sbjct: 664 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Query: 469 ALL--LKD---------EMVDRN-----------IKPSLS--TYRALICCFCGIGRSGEA 504
L L D + D++ + P LS AL+ GR EA
Sbjct: 724 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 783
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
L+ M+ G+ PD + L+ C V + +G F
Sbjct: 784 NELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVF 822
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%)
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M + S L + +G+ F ++ + G + ++ + GV + IY+
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ALC+D A ++++++ + P Y ++ C+ + AL + ++M
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P+ TY LI C GR EA L+ EM+ G+LP + C I C A
Sbjct: 281 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 340
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + +Y A+ + G L + L R R G PN +T +I+ L
Sbjct: 341 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 400
Query: 601 WKGMERKF 608
+ K+
Sbjct: 401 VENRRIKY 408
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 422 IVALCQDNRPFAAT-SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C A T S L+ + Q G L Y+ L+ L + A + M+
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P+L Y A+I C G +A ++M ++ ES M PD+ +I G+C + D++ A
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ AK+ +T +Y+ + N + G +++ +L + + G P TC I +L
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 17/219 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI-DQCWQVYEEMGRIGIC 237
AY+ G + +F + + G QP++ + L+ GL + DQ + +
Sbjct: 679 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD-----VV 733
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY--NTLISSYCKKGRLNDAF 295
PN +F T D D V+ K+ E DP L N L+S+ GR +A
Sbjct: 734 PNC-SFGYQTT------DQDAVSVMSAKLAE--LDPGLSVQVQNALVSNLSTAGRWFEAN 784
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + + PD Y +L+ L + V A +F M +G + Y LI A
Sbjct: 785 ELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICAL 844
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
C+ + +E++ M+ PD +++ G ++G
Sbjct: 845 CQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 28/233 (12%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF-QDLISCTEDCNWAYV 181
+PT Y +++ L N++ A + L L ++V +C QD +S
Sbjct: 702 QPTLWTYGVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS---------- 749
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICP 238
++ L V Q ++VS L+ + ++ E +G + G+CP
Sbjct: 750 ---VMSAKLAELDPGLSVQVQNALVS---------NLSTAGRWFEANELLGSMISQGLCP 797
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L + +VD G + + +G + L Y LI + C+ R +A +
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
M R PD V L++GL ++G + H M R P Y L
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 199/407 (48%), Gaps = 11/407 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C ++ L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L +M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
EM+ +KP + TY +I FC G L+ EM G LP+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPN 415
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 149/271 (54%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G I + F G +PS+VS N L+NG +K+ +D+ +++ M G+ P+
Sbjct: 146 FCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +YR
Sbjct: 206 VYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++LPDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKEG
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + M+ I D ++ +EGR + A ++ E+ G+ Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+P++
Sbjct: 386 MIINEFCKKGDVWTGSKLLKEMQRDGYLPNV 416
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 147/354 (41%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R V+ L+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK G++ A +F + GL P +VS+NTL+ Y K
Sbjct: 125 EESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKI 184
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 185 GDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTF 244
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + ++ +P L YN L+ LCK + A L DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+ C E
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVD 364
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L + +Y + N F + GD+ +L K R G+ PN +T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +R+ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P++V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 147/595 (24%), Positives = 268/595 (45%), Gaps = 59/595 (9%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
E ++ + +V IC ++ + L+ +L+ LL L ++ VL + Q+D AL FF
Sbjct: 157 EDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVL-QLQTDERVALRFF 215
Query: 114 NWV------KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
W ++D +P + Y ++ + A K AM++L + +
Sbjct: 216 YWADRQWRYRHDPIRRPEAFGYVMVSYSRA--GKLRNAMRVLTMM--------QKAGIEP 265
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
DL C + V + ++ + + V +P++++ N L+ G L+ ++ ++
Sbjct: 266 DLSICNTAIH-VLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMEL 324
Query: 228 YEEMGRIG------------------------------------ICPNTHTFNILTHVFC 251
EM G + P+ T+N H+
Sbjct: 325 IAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLS 384
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K+G D+ FL + EE F D V Y+ ++ S+C++GR++ A + M+ + +PD+V
Sbjct: 385 KHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVV 444
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TYT+++NGLC+E KV +A ++ +M G P+ VSY L+ CK G E++ ++
Sbjct: 445 TYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMS 504
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ P+ T +++ G+ +EG+ A +LV E+ + G + + LI +LCQ+ +
Sbjct: 505 EEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKV 564
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A +E+ +G ++ + ++ C+ D + AL L D+M N P + TY +
Sbjct: 565 DEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTI 624
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I GR EA L +ML G++P R +I+ YC + + E LL K
Sbjct: 625 IDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR---MGRVEDLLKLLEKMLS 681
Query: 552 IYDTES-YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS-LWKGM 604
+ + YN V G+L + +L + LR + TC +I S L KG+
Sbjct: 682 RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGI 736
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 206/437 (47%), Gaps = 17/437 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL---VKDCPHSVDVFQDLISCTED 175
D + P Y VH+L+ + A++ L E E V +S V
Sbjct: 366 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVH--------- 416
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
++ + G + ++ + + G P +V+ ++NGL + +DQ ++ +M + G
Sbjct: 417 ---SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PNT ++ L + CKNG+ + + EE+ + P+ +TY+ L+ + ++G+ ++A
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 533
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L R M ++ P V L+ LC+E KV EA + + ++ G + ++V++ T+I +
Sbjct: 534 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 593
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C++ ++ + SLL +M + +PD T I+ GK+GR+ A L +++ R G+ +
Sbjct: 594 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTP 653
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y +I C+ R LLE++ + YN+++E LC ++ A L +
Sbjct: 654 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYKLLGK 711
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
++ K +T LI + G + ++ M ++PD ++C + +E
Sbjct: 712 VLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGK 771
Query: 536 VNKAEALLGFFAKKFQI 552
+A+ L+ F ++ +I
Sbjct: 772 SEEADKLILRFVERGRI 788
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 199/407 (48%), Gaps = 11/407 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW-- 178
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYV 68
Query: 179 ------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C ++ L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L +M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
EM+ +KP + TY +I C G L+ EM G +P+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPN 415
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 151/271 (55%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR + F G +PS+VS N L+NG +K+ +D+ +++ M G+ P+
Sbjct: 146 FCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +YR
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++LPDL+TY TL+ GLCK+G +++AH L M +GL PD ++Y TLI CKEG
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 326 DLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + + GYVP++
Sbjct: 386 MIINEXCKKGDVWTGSKLLKEMQRXGYVPNV 416
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 157/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQRSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R V+ L+ + LM+ CKEG++R A +
Sbjct: 99 VPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSV 158
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P +VS+NTL+ Y K G + E L M +G++PD +T +++ G K
Sbjct: 159 FDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCK 218
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + ++ +P L
Sbjct: 219 ESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLIT 278
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM + +KP TY LI C G A M+
Sbjct: 279 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMI 338
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L + +Y + N + GD+
Sbjct: 339 KENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVW 398
Query: 573 KLMELQKRFLRLGFAPNNLT 592
+L K R G+ PN +T
Sbjct: 399 TGSKLLKEMQRXGYVPNVVT 418
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
+ P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLV---PNXV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +R+ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P++V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 158/613 (25%), Positives = 279/613 (45%), Gaps = 83/613 (13%)
Query: 42 KSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLR 101
KS+ NP+ + + ++ IC +LK+ L+ +L L L +SRV+
Sbjct: 46 KSILNPI--------SDDVVLRAICVNLKQ--RRWNFLEKNLASLTNAL----VSRVVCE 91
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML-----------C 150
++ L F+NWV + + C ++H+L + ++ A+ ++
Sbjct: 92 FRNTPQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPL 151
Query: 151 ELVELVKD----CPHSVDVFQDLI-SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
E++E + + C + VF L+ +CT+ +G + + +K G +I
Sbjct: 152 EVLEALNNSYGICESNHAVFDALVRACTQ--------IGATVGACEVIKKLQIEGCWVTI 203
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
+ N L+ L+K+N I + W VY+EM G N +TFN++ H CK+ + + +
Sbjct: 204 HAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDCKLQEALSVFYR 263
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR---IMYRRNVLPDLVTYTTLMNGLCK 322
I + G P++VT+N ++ CK G ++ A L R IM ++ P+ VTY +L++G CK
Sbjct: 264 ILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSVTYNSLIDGFCK 323
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP---- 378
G + A +L + M+ + P++ +Y T+I Y + G ++E+ L EM+ G+ P
Sbjct: 324 IGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLPNSVV 383
Query: 379 -------------------------------DTFTCQIIVQGYGKEGRLLSA---LNLVV 404
D FTC I+ +G + G + +A LN V+
Sbjct: 384 YNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFLNQVL 443
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E + S +I LI LC+ N AA LL R+ G VP + + L++ CK
Sbjct: 444 ENNLIEDAFSHNI---LINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEG 500
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ A+ + D+MV KP+L Y ++I C G A SL+D + G++ D+
Sbjct: 501 NIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLV-DTITYN 559
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LINGY +KA L + + +YN V + G + + EL +
Sbjct: 560 TLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLW 619
Query: 585 GFAPNNLTCKYMI 597
G P+N+T + ++
Sbjct: 620 GVLPDNITYRTLV 632
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 198/453 (43%), Gaps = 58/453 (12%)
Query: 133 VHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNWAYVKVGLI---- 186
V I AWNN S +K V + V+++++S E+ N V V +
Sbjct: 201 VTIHAWNNFLSHLIK--------VNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALCKDC 252
Query: 187 --RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY---EEMGRIGICPNTH 241
+E+ F + L G P++V+ N +++G K+ +D ++ E M I PN+
Sbjct: 253 KLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKPNSV 312
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FCK G + ++ + +P++ TY T+I Y + G L +A L M
Sbjct: 313 TYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEM 372
Query: 302 YRRNVLPDLVTYTTLMN-----------------------------------GLCKEGKV 326
R +LP+ V Y ++M+ GLC+ G +
Sbjct: 373 VERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYI 432
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A + ++++ L D S+N LI CK ++ LL M G+ PD T +
Sbjct: 433 TTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTL 492
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + SA+ + ++ + + +Y+ +I LC+D A SL++ + + G
Sbjct: 493 IDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL 552
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
V ++ YN L+ C A L M + I S +TY +I C G EA
Sbjct: 553 VDTIT-YNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKE 611
Query: 507 LMDEMLESGMLPDSQICRVL---INGYCMEKDV 536
LM M+ G+LPD+ R L IN C ++V
Sbjct: 612 LMTMMVLWGVLPDNITYRTLVININKNCSAEEV 644
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 1/341 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+G I + + + + + +P++ + ++ G + C+++ ++ +EM G+ P
Sbjct: 320 GFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLCDEMVERGLLP 379
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ +N + H GDVD + + ++ D T + L C+ G + A
Sbjct: 380 NSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNGYITTALKFL 439
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ N++ D ++ L+N LCK A QL RM RGL PD+V++ TLI +CKE
Sbjct: 440 NQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKE 499
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + + +M+ P+ I+ G K+G + A +LV LQR G+ + Y
Sbjct: 500 GNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGL-VDTITY 558
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI + A L + G + S YN +++ LCK V +A L MV
Sbjct: 559 NTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVL 618
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ P TYR L+ + E + L D M+ G++PD
Sbjct: 619 WGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPD 659
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 10/371 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP S Y ++ + A ++ E++++ D +V + +I Y
Sbjct: 307 IKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKI--DIEPNVRTYATMIE-------GYS 357
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E+ + + ++ G P+ V N +++ L +D V+ +M I +
Sbjct: 358 RAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKF 417
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T +ILT C+NG + FL ++ E D ++N LI+ CK A L M
Sbjct: 418 TCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARM 477
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
Y R ++PD+VT+ TL++G CKEG + A Q++ +MV P+++ YN++I CK+G +
Sbjct: 478 YVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLV 537
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++SL+ + G+ DT T ++ GY G+ A L +Q G+ S Y+ +
Sbjct: 538 DVARSLVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTV 596
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ A L+ + G +P Y L+ ++ K S + + L D MV + +
Sbjct: 597 IKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGV 656
Query: 482 KPSLSTYRALI 492
P TY ++
Sbjct: 657 VPDKLTYENIV 667
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 13/252 (5%)
Query: 108 SALTFFNWV-KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+AL F N V +N+L S N ++++ L +N F+ A ++L + V+ V F
Sbjct: 434 TALKFLNQVLENNLIEDAFSHN--ILINFLCKSNNFAAARQLLARM--YVRGLVPDVVTF 489
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI + K G I + + + K + +P+++ N ++NGL K +D
Sbjct: 490 GTLID-------GHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARS 542
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ + + R+G+ +T T+N L + + G DK ++ G TYNT+I C
Sbjct: 543 LVDVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLC 601
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K G + +A L +M VLPD +TY TL+ + K E +L MV +G+ PD +
Sbjct: 602 KFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKL 661
Query: 347 SYNTLIFAYCKE 358
+Y ++ +E
Sbjct: 662 TYENIVSPLLQE 673
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 269/587 (45%), Gaps = 71/587 (12%)
Query: 69 LKKGDSHLTLLQNDLKPLLPH-LGAHEI--------------SRVLLRCQSDS--VSALT 111
LK+G S L +Q KPL+P L ++ I S VL R ++D S L
Sbjct: 3 LKEGRSLLMKIQ---KPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLG 59
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
FF+ + N + T+S Y +++ L + M M+ +++ +K ++ +DL
Sbjct: 60 FFSAIANSNAFQHTASTYRVMIERLGRECE----MDMVQYILQQMK--MDGINCCEDLFI 113
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C + Y +VG ++ K F + + G +P++ N LL+ LL N +Y M
Sbjct: 114 CIIN---GYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+ G+ PN T+NIL CKN VD + ++ +G PD VTY T++SS CK G++
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+DA R + R P + Y L++G+CKEG++ A +L M+ G+ P++VSY+ +
Sbjct: 231 DDA----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I + C G ++ + +L +M G + T +++G G+L AL+L + + G
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ Y+ LI LC + A + +++ + G +P++ Y+ L++ K + A
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ M+ +P++ TY ++ C +A SL+++M G P++ I G C
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465
Query: 532 MEKDV--------------------------------NKAEALLGFF----AKKFQIYDT 555
V NK E G F A+ Q +
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP-NL 524
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN V F+ G + + ++L + L G AP+++T MIH+ K
Sbjct: 525 VTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 226/482 (46%), Gaps = 15/482 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++ L N++ A K+ E+ K CP + ++S + K
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSN--KGCPPDAVTYTTMVS-------SLCKA 227
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ + L F+PS+ N L++G+ K I+ ++ EM G+ PN ++
Sbjct: 228 GKIDDA-----RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + + C +G+V+ ++ G D ++ T+ LI +G+L +A L+++M +
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++V Y TL++GLC G + EA Q+ +M G P++ +Y+ LI + K G +
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ M+ +G P+ T +V K A +LV ++ G + + ++ I
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK 462
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC + R A LLER+ G +P++ YNEL+++L + + +A L E+ RN++P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L TY ++ F G GEA+ L + L G PDS +I+ YC + V A L+
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 544 GFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + D +Y ++ ++ + M + + G PN T ++ +
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642
Query: 603 GM 604
+
Sbjct: 643 SL 644
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 45/302 (14%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++H L N A++ +C+ ++ C +V + LI + K
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQ-VCDQMQR-SGCLPNVTTYSILID-------GFAK 396
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + + +T+ + + G +P++V+ +++ L K + DQ + E+M G PNT T
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMT 456
Query: 243 FNILTHVFCKNGDVD-----------------------------KVN------GFLEKIE 267
FN C NG V+ ++N G ++IE
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
P+LVTYNT++ + + G + +A L+ R PD +TY T+++ CK+GKV+
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576
Query: 328 EAHQLFHRMVH-RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A QL R+ + PDI++Y +LI+ C ++E+ + L + + GI P+ T +
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Query: 387 VQ 388
V+
Sbjct: 637 VR 638
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 200/419 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E K G P +V N L++G + + + + EM G P T+
Sbjct: 218 GRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTY 277
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + K GD++K+ ++ + G P++ YN++I + CK A + + M+
Sbjct: 278 GSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFA 337
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD++T+ TL+ GLC EG VR+A + R L+P+ +SY LI +C G++
Sbjct: 338 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMA 397
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL EMMG G PD T ++ G G++ AL + ++ V +IY+ LI
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ + AA ++LE + + P +Y L++ + +++ DA + + M + ++P
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ + A+I +C G EA+ M M + G +PD +I+GY + ++N A L
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K+ + +Y+++ N + + GD L +PN +T +I SL+K
Sbjct: 578 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 636
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 200/425 (47%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY G++ ++ + + G P + CN LL L++ D ++Y+EM
Sbjct: 142 AYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSG 201
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ +L C G V++ +E G P +V YN LI YC++G + L
Sbjct: 202 ADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLL 261
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + LP LVTY +L+N L K+G + + LF M RGLSP++ YN++I A CK
Sbjct: 262 LGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCK 321
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ +L +M +G PD T ++ G EG + A + + E R ++ ++
Sbjct: 322 CWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLS 381
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C AA+ LL + G+ P + + L+ L V++AL+++++M
Sbjct: 382 YTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 441
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+R + P ++ Y LI C A ++++EMLE + PD + LI+G+ +++
Sbjct: 442 ERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 501
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + F K D S NA+ + + G +S+ + ++G P+ T +I
Sbjct: 502 DARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 561
Query: 598 HSLWK 602
K
Sbjct: 562 SGYAK 566
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 202/478 (42%), Gaps = 85/478 (17%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P++V+ L+N L K +++ ++ EM + G+ PN +N + CK +
Sbjct: 269 GFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQA 328
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ G DPD++T+NTLI+ C +G + A + R RR + P+ ++YT L++G
Sbjct: 329 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 388
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C G++ A L M+ RG +PD+V++ LI GK+ E+ + +M ++PD
Sbjct: 389 FCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 448
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+++ G K+ L +A N++ E+ V +Y LI + A + E
Sbjct: 449 VNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 508
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALL----------LKDE-------------- 475
+ G P + N +++ C+ +++A+L + DE
Sbjct: 509 FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 568
Query: 476 -----------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM---------------- 508
M+ R KP++ TY +LI +C G + A L
Sbjct: 569 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 628
Query: 509 ---------DEMLESGML----------PDSQICRVLINGY------------CMEKDVN 537
D++L +G+ P+ L+NG C +V+
Sbjct: 629 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 688
Query: 538 KAEALLGFFAK-KFQIYD--TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ALL F K F I D +YNA+ L + ++ + R + G+ PN +T
Sbjct: 689 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 746
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 193/467 (41%), Gaps = 31/467 (6%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P Q N ++D +C + + L Q P + + + C V
Sbjct: 307 PNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFN-TLITGLCHEGHVRKAEH 365
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLI 170
F E+ P +Y ++H + A +L E++ H+ DV F LI
Sbjct: 366 FLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGR----GHTPDVVTFGALI 421
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
V G + E+ K + P + N L++GL K + + + EE
Sbjct: 422 H-------GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEE 474
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + P+ + L F ++ ++ E +E +G PD+V+ N +I YC+ G
Sbjct: 475 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGM 534
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+++A M + +PD TYTT+++G K+G + A + M+ R P++V+Y++
Sbjct: 535 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 594
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YCK G ++ L M + P+ T I++ K+ ++L A L E
Sbjct: 595 LINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA-GLYFETMLLN 653
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLL----ERIGQDGYV------------PSLEIYN 454
D+ + +V P S+ E G+D + P YN
Sbjct: 654 HCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYN 713
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
++ SLC+ + + +AL K+ M + P+ T+ +L+ FC +G+S
Sbjct: 714 AIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 760
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 172/401 (42%), Gaps = 21/401 (5%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ L++GL+ + + V E+M + P+ + +N+L CK +
Sbjct: 409 GHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAA 468
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE++ E+ PD Y TLI + + L DA ++ M + V PD+V+ ++ G
Sbjct: 469 KNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKG 528
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+ G + EA M G PD +Y T+I Y K+G + + L +M+ P+
Sbjct: 529 YCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPN 588
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ GY K G SA L +Q +S + Y LI +L + ++ A E
Sbjct: 589 VVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFE 648
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVA--------------DALLLKDEMVDRNI-KPS 484
+ + P+ + L+ L C DALL+ + + +I P
Sbjct: 649 TMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPR 708
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S Y A+I C EA+ + M + G +P+ L+ G+C V K+
Sbjct: 709 NSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC---SVGKSMNWRT 765
Query: 545 FFAKKFQIYDTE---SYNAVFNMFAEDGDLSKLMELQKRFL 582
+FQ + E Y +F+ +A + ++ + +++L
Sbjct: 766 ILPNEFQQEEFEIIFRYKFLFDQYATESVCCEVSRVLQQYL 806
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 112/297 (37%), Gaps = 36/297 (12%)
Query: 340 GLSPDIVSYNTLIFAYCKEG------------------------------------KMQE 363
G +P L+ AY G + +
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ L EM+G D ++ ++V+G EGR+ L L+ G Y+ LI
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ LL + G++P+L Y L+ L K + L EM R + P
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y ++I C + +A+ ++ +M SG PD LI G C E V KAE L
Sbjct: 308 NVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 367
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + SY + + F G+L +L + G P+ +T +IH L
Sbjct: 368 REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGL 424
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 1/194 (0%)
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIG-QDGYVPSLEIYNELMESLCKCDSVAD 468
G + +R L+ A AT + ER+ Q G +P + N L++ L + D
Sbjct: 128 GAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDD 187
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L DEM+ + + L+ C GR E + L++ +G +P VLI+
Sbjct: 188 ARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLID 247
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GYC D+ + LLG K + +Y ++ N + GDL K+ L + G +P
Sbjct: 248 GYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSP 307
Query: 589 NNLTCKYMIHSLWK 602
N +I +L K
Sbjct: 308 NVQIYNSVIDALCK 321
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 195/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T YC ++H L ++ K L +V K + VF ++ T+ +
Sbjct: 10 RHTLHTYCTMIHFLC-THQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G + ++ + FR T F +C +L L+KL W Y+E+
Sbjct: 69 FSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNI+ H FCK G++ + + I + G P +V++NTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE KV EA++LF+ M+ RGL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G + + + +M+ G PD T ++ G K+G L L+ E+ G+
Sbjct: 249 DVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC G A L+ EM G +P
Sbjct: 369 FREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 146/329 (44%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ L+++Y + G ++DA +R+ + T ++ L K + +
Sbjct: 65 DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N ++ +CKEG+M+ ++S+ + G+ P + ++ GY +
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI LC++++ A L + G VP+ +
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTF 244
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V A+ + +M+ + P L TY LI C G + +L+DEM
Sbjct: 245 TTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSM 304
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G+ PD LI+G C E D+ A K+ D +Y A+ + ++G
Sbjct: 305 NGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADD 364
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + L +G P+N T +I+ K
Sbjct: 365 AEKMFREMLSVGLKPDNGTYTMIINEFCK 393
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 230/485 (47%), Gaps = 9/485 (1%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + +++ L + S A++++ +VE+ H DLI+ N +
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEM----GHK----PDLITINTLVNGLCLS 206
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G E+ K ++ G QP+ V+ +LN + K ++ +M I +
Sbjct: 207 -GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++I+ CK+G +D ++E +G +++TYN LI +C GR +D L R M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R + P++VT++ L++ KEGK+REA +L M+HRG++PD ++Y +LI +CKE +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ ++ M+ G P+ T I++ GY K R+ L L ++ GV Y+ LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ + A L + + P++ Y L++ LC AL + +++ ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ Y +I C + +A L + G+ P + ++I G C + +++AE L
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +YN + DGD +K ++L + R GF+ + T K +I L
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Query: 603 GMERK 607
G +K
Sbjct: 626 GRLKK 630
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 203/426 (47%), Gaps = 46/426 (10%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN-------- 177
+YC ++H L + S A K L ++V K + VF ++ T+ +
Sbjct: 3 SYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGLI 61
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY++ G +R++ + +R T + F +C +L L+KL W Y+E+ G
Sbjct: 62 TAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGYP 121
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H FCK D+ + I + G P +V+YNTL++ Y + G L++ F L
Sbjct: 122 ASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI +CK
Sbjct: 182 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 242 NGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK----- 296
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
P Y L++ CK + A + M+
Sbjct: 297 ------------------------------PDKITYTALIDGCCKEGDLDTAFEHRKRMI 326
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
NI+ Y ALI C GRS +A ++ EML G+ PD++ ++IN +C + DV
Sbjct: 327 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 386
Query: 538 KAEALL 543
K LL
Sbjct: 387 KGSKLL 392
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 147/336 (43%), Gaps = 6/336 (1%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 53 DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 112
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CKE ++ ++S+ + G+ P + ++ GY +
Sbjct: 113 KEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI LC++++ A L + + G VP+ +
Sbjct: 173 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V AL + +M+ +++ P L TY LI C G +A L+DEM
Sbjct: 233 TTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 292
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD LI+G C E D++ A ++ D +Y A+ + ++G
Sbjct: 293 KGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 352
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHS------LWKG 603
++ + L +G P+ T +I+ +WKG
Sbjct: 353 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 388
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 123/306 (40%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 1 LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGL 60
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 61 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGY 120
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A S+ + I + G PS+ YN LM + + +
Sbjct: 121 PASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + +A L DEML G++P+ LI+G+C
Sbjct: 181 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + + D +YN + + GDL + +L G P+ +
Sbjct: 241 KNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 300
Query: 592 TCKYMI 597
T +I
Sbjct: 301 TYTALI 306
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 191/398 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+ D + E+M R+ I +T+NIL + FC+ +
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + +LL +M I D
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L +N L+++ K +A L D+M+ R+I P + TY +L+ FC R
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A + + M+ PD LI G+C K V L + + + DT +Y +
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
DGD ++ K+ + G P+ +T ++ L
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 213/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S A+ ++ +V+ + C ++ + +++ K
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN-------GLCK 199
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + K + +V N +++ L K +D +++EM GI PN T
Sbjct: 200 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E+ +P+LVT+N LI ++ K+G+ +A LY M
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD+ TY +L+NG C ++ +A Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ DT T ++QG +G +A + ++ GV Y L+
Sbjct: 380 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + + A + + + + + IY ++E +CK V D L + + +K
Sbjct: 440 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 499
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY +I C EA +L+ +M E G LP+S LI + + D + L
Sbjct: 500 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 559
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 560 IREMRSCRFVGDASTIGLVANML-HDGRLDK 589
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 193/416 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K D + +M I + FN +
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 229
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK VD +++E +G P++VTY++LIS C GR +DA L M + +
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+LVT+ L++ KEGK EA +L+ M+ R + PDI +YN+L+ +C ++ ++K +
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ L E+ G+ Y LI L
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 409
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D A + +++ DG P + Y+ L++ LC + AL + D M IK +
Sbjct: 410 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 469
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ +I+G C ++ + +A ALL
Sbjct: 470 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 529
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ +YN + DGD + EL + F + T + + L G
Sbjct: 530 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 585
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 11/442 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H + + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 80 HGLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 132
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 133 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G + A L M + D+V + T+++ LCK V +A LF M +G
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++V+Y++LI C G+ ++ LL +M+ I P+ T ++ + KEG+ + A
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L ++ + SI DI+ Y L+ C +R A + E + P + YN L++
Sbjct: 313 KLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 370
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK V D L EM R + TY LI G A + +M+ G+ P
Sbjct: 371 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 430
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +L++G C + KA + + K D Y + + G + +L
Sbjct: 431 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 490
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
G PN +T MI L
Sbjct: 491 CSLSLKGVKPNVVTYNTMISGL 512
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 1/392 (0%)
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L NGL + +D ++ M + P+ FN L K D V EK++
Sbjct: 18 ILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
L TYN LI+ +C++ +++ A L M + P +VT ++L+NG C ++ +A
Sbjct: 77 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L +MV G PD +++ TLI K E+ +L+ M+ G P+ T ++V G
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G ALNL+ +++ + I++ +I +LC+ A +L + + G P+
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ Y+ L+ LC +DA L +M+++ I P+L T+ ALI F G+ EA L D
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M++ + PD L+NG+CM ++KA+ + F K D +YN + F +
Sbjct: 317 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 376
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ EL + G + +T +I L+
Sbjct: 377 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%)
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
R S Y ++ + K+ ++ L M+ + P ++ K +
Sbjct: 6 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 65
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
++L ++QR + Y+ LI C+ ++ A +LL ++ + GY PS+ + L+
Sbjct: 66 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 125
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C ++DA+ L D+MV+ +P T+ LI ++ EAV+L+D M++ G P
Sbjct: 126 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 185
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ V++NG C D + A LL D +N + + + + + L
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
K G PN +T +I L
Sbjct: 246 KEMETKGIRPNVVTYSSLISCL 267
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+PS+ +N+L+ ++ K + L ++M I L TY LI CFC + A++
Sbjct: 44 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 103
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ +M++ G P L+NGYC K ++ A AL+ + DT ++ + +
Sbjct: 104 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 163
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+ + L R ++ G PN +T +++ L K
Sbjct: 164 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 199
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 205/425 (48%), Gaps = 23/425 (5%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ E+ + F K P SCN LL+ L K+ D + +++MG GI + T+N
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I+ CK GD++ +++E GF PD+VTYN+LI + K G L++ ++ M
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ PD++TY L+N CK ++ +A + H M GL P++V+Y+T I A+CKEG +QE+
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+M + P+ FT ++ K G L AL LV E+ + G+ ++ Y L+
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC++ R A + + G P+ E Y L+ K + A + EM ++ IKP
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL- 543
L Y ++ C R EA L+ E+ ESG+ ++ I L++ Y +A LL
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLE 360
Query: 544 -------GF-------FAKKF--------QIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
G AKK + D +Y A+ + + G+L + + L+ R
Sbjct: 361 EMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 420
Query: 582 LRLGF 586
+ +G
Sbjct: 421 IEIGM 425
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 204/428 (47%), Gaps = 23/428 (5%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F + + GF P IV+ N L++G KL +D+C ++E+M P+
Sbjct: 68 KEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVI 127
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FCK + K FL +++ G P++VTY+T I ++CK+G L +A + M
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P+ TYT+L++ CK G + EA +L ++ G+ ++V+Y L+ C+EG+M
Sbjct: 188 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 247
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ + M+ G+ P+ T +V G+ K + A +++ E++ + +Y +
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 307
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK-------- 473
+ LC ++R A L+ I + G + IY LM++ K +AL L
Sbjct: 308 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVD 367
Query: 474 ---------------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
DEM+D+ + P Y ALI G EA++L D M+E GM
Sbjct: 368 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 427
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D LI G V KA LL K + D Y + + G + + +ELQ
Sbjct: 428 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 487
Query: 579 KRFLRLGF 586
+ G
Sbjct: 488 NEMAKRGM 495
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 193/395 (48%), Gaps = 19/395 (4%)
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
DC V + LI+C + K + ++F+ + G +P++V+ + ++ K
Sbjct: 121 DCDPDVITYNALINC-------FCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 173
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + + + +M R+ + PN T+ L CK G++ + +E+I + G ++VT
Sbjct: 174 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 233
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y L+ C++GR+ +A ++R M V P+ TYT L++G K ++ A + M
Sbjct: 234 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ + PD++ Y T+++ C E +++E+K L+ E+ +GI + ++ Y K G+
Sbjct: 294 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 353
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL L+ E+ L+ LC++N A L + + G +P Y L+
Sbjct: 354 EALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ K ++ +AL L+D M++ ++ L Y ALI G+ +A +L+DEM+ G+L
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
PD + LI Y V++A L AK+ I
Sbjct: 462 PDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 35/318 (11%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L +A + M + V P + L++ L K G+ + + F M G+ + +YN
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I CKEG ++ ++SL +M G PD T ++ G+GK G L + + +++
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
Y+ LI C+ R A L + +G P++ Y+ +++ CK + +A+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+M + P+ TY +LI C G EA+ L++E+L++G+ + L++G
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C E+G + + E+ + L G APN
Sbjct: 242 C-----------------------------------EEGRMKEAEEVFRAMLNAGVAPNQ 266
Query: 591 LTCKYMIHSLWKGMERKF 608
T ++H K E ++
Sbjct: 267 ETYTALVHGFIKAKEMEY 284
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 191/398 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+ D + E+M R+ I +T+NIL + FC+ +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + +LL +M I D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L +N L+++ K +A L D+M+ R+I P + TY +L+ FC R
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A + + M+ PD LI G+C K V L + + + DT +Y +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
DGD ++ K+ + G P+ +T ++ L
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 213/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S A+ ++ +V+ + C ++ + +++ K
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN-------GLCK 237
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + K + +V N +++ L K +D +++EM GI PN T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E+ +P+LVT+N LI ++ K+G+ +A LY M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD+ TY +L+NG C ++ +A Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ DT T ++QG +G +A + ++ GV Y L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + + A + + + + + IY ++E +CK V D L + + +K
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY +I C EA +L+ +M E G LP+S LI + + D + L
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 598 IREMRSCRFVGDASTIGLVANML-HDGRLDK 627
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 193/416 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K D + +M I + FN +
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK VD +++E +G P++VTY++LIS C GR +DA L M + +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+LVT+ L++ KEGK EA +L+ M+ R + PDI +YN+L+ +C ++ ++K +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ L E+ G+ Y LI L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D A + +++ DG P + Y+ L++ LC + AL + D M IK +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ +I+G C ++ + +A ALL
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ +YN + DGD + EL + F + T + + L G
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 11/442 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H + + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 118 HGLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G + A L M + D+V + T+++ LCK V +A LF M +G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++V+Y++LI C G+ ++ LL +M+ I P+ T ++ + KEG+ + A
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L ++ + SI DI+ Y L+ C +R A + E + P + YN L++
Sbjct: 351 KLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK V D L EM R + TY LI G A + +M+ G+ P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +L++G C + KA + + K D Y + + G + +L
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
G PN +T MI L
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGL 550
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 1/392 (0%)
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L NGL + +D ++ M + P+ FN L K D V EK++
Sbjct: 56 ILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
L TYN LI+ +C++ +++ A L M + P +VT ++L+NG C ++ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L +MV G PD +++ TLI K E+ +L+ M+ G P+ T ++V G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G ALNL+ +++ + I++ +I +LC+ A +L + + G P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ Y+ L+ LC +DA L +M+++ I P+L T+ ALI F G+ EA L D
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M++ + PD L+NG+CM ++KA+ + F K D +YN + F +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ EL + G + +T +I L+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%)
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
R S Y ++ + K+ ++ L M+ + P ++ K +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
++L ++QR + Y+ LI C+ ++ A +LL ++ + GY PS+ + L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C ++DA+ L D+MV+ +P T+ LI ++ EAV+L+D M++ G P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ V++NG C D + A LL D +N + + + + + L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
K G PN +T +I L
Sbjct: 284 KEMETKGIRPNVVTYSSLISCL 305
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+PS+ +N+L+ ++ K + L ++M I L TY LI CFC + A++
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ +M++ G P L+NGYC K ++ A AL+ + DT ++ + +
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+ + L R ++ G PN +T +++ L K
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 195/390 (50%), Gaps = 14/390 (3%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
CP V + +I K G + +++ T+ + LD P V+ N ++ L K
Sbjct: 7 CPPDVVSYNTIID-------GLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKA 59
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+D+ +V M + PN T+N + H +C +G +K G K+ +G +PD+VTY
Sbjct: 60 QAMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTY 115
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N+L+ CK G+ +A ++ M +R + PD+ TY TL++G +G + E H L MV
Sbjct: 116 NSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQ 175
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G+ D +N LI AY K+ K+ E + +M G+ P+ + ++ G K GRL
Sbjct: 176 NGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDD 235
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A+ ++ G++ + +Y LI ALC ++ A L+ I G P++ +N +++
Sbjct: 236 AMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILD 295
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
SLCK V ++ L D + + P + TY LI +C G+ A+ L+ M+ G+ P
Sbjct: 296 SLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKP 355
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAK 548
DS LINGYC +N+ E L F +
Sbjct: 356 DSVTYSTLINGYC---KINRMEDALALFKE 382
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 187/397 (47%), Gaps = 13/397 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D + P + Y I+ L+ AM++L +V + +C +
Sbjct: 39 DRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV--MPNCFTYNSIMH----------- 85
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G ++ FRK G +P +V+ N L++ L K + ++++ M + G+ P
Sbjct: 86 GYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKP 145
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L H + G + +++ L + + G D +N LI +Y K+ ++++ ++
Sbjct: 146 DITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVF 205
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P+ V Y T+++GLCK G++ +A F +M+ +GL+P++V Y +LI A C
Sbjct: 206 SKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTY 265
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K ++++ L++E++ GI P+ I+ KEGR++ + L L GV+ Y
Sbjct: 266 DKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITY 325
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C + A LL + G P Y+ L+ CK + + DAL L EM
Sbjct: 326 STLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMES 385
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+ P + TY ++ R+ A L + ESG
Sbjct: 386 NGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 162/316 (51%), Gaps = 2/316 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F + G +P I + LL+G + + + M + G+ + H
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNIL + K VD+V K+ ++G P+ V Y T+I CK GRL+DA + M
Sbjct: 184 VFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++V YT+L++ LC K +A +L ++ +G++P+IV +NT++ + CKEG++
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303
Query: 362 QESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
ESK L++++G+ G+ PD T ++ GY G++ A+ L+ + G+ Y
Sbjct: 304 IESKK-LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYST 362
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ NR A +L + + +G P + YN ++ L + A A L + +
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422
Query: 481 IKPSLSTYRALICCFC 496
+ LSTY ++ F
Sbjct: 423 TQLELSTYNIILMDFA 438
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 11/318 (3%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F + VK L KP + Y ++H A +L +V+ H V F LI
Sbjct: 135 FDSMVKRGL--KPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV--FNILIC 190
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
AY K + E F K G P+ V+ +++GL KL +D +E+M
Sbjct: 191 -------AYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQM 243
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
G+ PN + L H C +K + +I ++G +P++V +NT++ S CK+GR+
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++ L+ ++ V PD++TY+TL++G C GK+ A +L MV GL PD V+Y+TL
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTL 363
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I YCK +M+++ +L EM NG+ PD T II+ G + R +A L + G
Sbjct: 364 INGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGT 423
Query: 412 SISRDIYDYLIVALCQDN 429
+ Y+ +++ + N
Sbjct: 424 QLELSTYNIILMDFAKTN 441
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 134/304 (44%), Gaps = 44/304 (14%)
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+V+Y T+++GL KEG V +A+ +H M+ R +SPD V+YN++I A K M + +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L M + P+ FT I+ GY C
Sbjct: 69 LTVM----VMPNCFTYNSIMHGY-----------------------------------CS 89
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A + ++ DG P + YN LM+ LCK +A + D MV R +KP ++T
Sbjct: 90 SGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITT 149
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L+ + G E L+ M+++GM D + +LI Y ++ V++ +
Sbjct: 150 YGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMR 209
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-----WK 602
++ + +Y V + + G L M ++ + G PN + +IH+L W+
Sbjct: 210 QQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWE 269
Query: 603 GMER 606
E
Sbjct: 270 KAEE 273
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 111/216 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ F + +D G P++V L++ L + ++ ++ E+ GI PN
Sbjct: 229 KLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIV 288
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN + CK G V + + + G +PD++TY+TLI YC G+++ A L M
Sbjct: 289 FFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGM 348
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD VTY+TL+NG CK ++ +A LF M G++PDI++YN ++ + +
Sbjct: 349 VSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRT 408
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+K L + +G + T II+ + K L+
Sbjct: 409 AAAKELYARITESGTQLELSTYNIILMDFAKTNSLM 444
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + + K + VG +P V+ + L+NG K+N ++ +++EM G+ P
Sbjct: 331 GYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNP 390
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ H + +I E G +L TYN ++ + K L F +
Sbjct: 391 DIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFGCF 450
Query: 299 R 299
R
Sbjct: 451 R 451
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 168/317 (52%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +VS + ++NG K +D+ + Y EM I PN T+N + CK VDK
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + G PD +TYN+++ +C G+ +A + M V PD+VTY +LM+ LCK
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ EA ++F M RGL PDI +Y TL+ Y +G + E LL M+ NGI+P+ +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+V Y K+ ++ A+ + ++++ G++ + Y +I LC+ R A E++
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P +YN L+ SLC D A L EM+DR I S + ++I C GR
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 309
Query: 503 EAVSLMDEMLESGMLPD 519
E+V L D M+ G+ PD
Sbjct: 310 ESVKLFDLMVRIGVKPD 326
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 162/311 (52%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ +++ + + F K GD+DK ++ ++ P++VTYN++I++ CK ++ A +
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + V+PD +TY ++++G C G+ +EA +M G+ PD+V+YN+L+ CK
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ E++ + M G+ PD T ++QGY +G L+ L+ + R G+ + +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ L+ A + + A + ++ Q G P+ Y +++ LCK V DA+L ++M+
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
D ++P Y +LI C + +A L EML+ G+ + +I+ +C E V
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 309
Query: 538 KAEALLGFFAK 548
++ L +
Sbjct: 310 ESVKLFDLMVR 320
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 112/276 (40%), Gaps = 40/276 (14%)
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRL-----------------------------------L 397
G PD + ++ G+ KEG L
Sbjct: 5 GGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVD 64
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A+ ++ + + GV Y+ ++ C +P A L+++ DG P + YN LM
Sbjct: 65 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 124
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ LCK +A + D M R +KP ++TY L+ + G E L+D M+ +G+
Sbjct: 125 DYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 184
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ + +L+ Y ++ V +A + ++ + +Y V ++ + G + M
Sbjct: 185 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLY 244
Query: 578 QKRFLRLGFAPNNLTCKYMIHSL-----WKGMERKF 608
++ + G P+++ +IHSL W+ E F
Sbjct: 245 FEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELF 280
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 227/481 (47%), Gaps = 9/481 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L +P + + +++ L + S A++++ +VE+ H DLI+ N
Sbjct: 250 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM----GHK----PDLITINTLVN-G 300
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
G E+ K ++ G QP+ V+ +LN + K ++ +M I +
Sbjct: 301 LCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 360
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++I+ CK+G +D ++E +G +++TYN LI +C GR +D L R
Sbjct: 361 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 420
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +R + P++VT++ L++ KEGK+REA +L M+HRG++PD ++Y +LI +CKE
Sbjct: 421 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 480
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ ++ M+ G P+ T I++ GY K R+ L L ++ GV Y+
Sbjct: 481 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 540
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C+ + A L + + P++ Y L++ LC AL + +++
Sbjct: 541 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 600
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++ + Y +I C + +A L + G+ P + ++I G C + +++A
Sbjct: 601 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 660
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
E L + D +YN + DGD +K ++L + R GF+ + T K +I
Sbjct: 661 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDM 720
Query: 600 L 600
L
Sbjct: 721 L 721
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 224/479 (46%), Gaps = 9/479 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT ++ + +A ++ + LC+ +EL K H++ +I+C C K+
Sbjct: 184 PTVIDFSRLFSAIAKTKQYDLVLA-LCKQMEL-KGIAHNLYTLSIMINCFCRCR----KL 237
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L +F K + +G++P+ ++ + L+NGL + + ++ + M +G P+ T
Sbjct: 238 CL---AFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 294
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + C +G + ++K+ E G P+ VTY +++ CK G+ A L R M
Sbjct: 295 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
RN+ D V Y+ +++GLCK G + A LF+ M +G++ +I++YN LI +C G+ +
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
LL +M+ I P+ T +++ + KEG+L A L E+ G++ Y LI
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C++N A +++ + G P++ +N L+ CK + + D L L +M R +
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
TY LI FC +G+ A L EM+ + P+ ++L++G C + KA +
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D YN + + + +L G P T MI L K
Sbjct: 595 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK 653
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 192/425 (45%), Gaps = 36/425 (8%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +GL+ + D ++ +M P F+ L K D V +++E +G
Sbjct: 158 LRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 216
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+L T + +I+ +C+ +L AF + + P+ +T++TL+NGLC EG+V EA
Sbjct: 217 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 276
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT-------- 382
+L RMV G PD+++ NTL+ C GK E+ L+ +M+ G P+ T
Sbjct: 277 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 336
Query: 383 CQ---------------------------IIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C+ II+ G K G L +A NL E++ G++ +
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 396
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI C R LL + + P++ ++ L++S K + +A L E
Sbjct: 397 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 456
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ R I P TY +LI FC +A ++D M+ G P+ + +LINGYC
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
++ L + + + DT +YN + F E G L+ EL + + PN +T K
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576
Query: 596 MIHSL 600
++ L
Sbjct: 577 LLDGL 581
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 117/229 (51%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+I + N L+NG K N ID +++ +M G+ +T T+N L FC+ G ++
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ P++VTY L+ C G A ++ + + + D+ Y +++G
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 615
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+C KV +A LF + +G+ P + +YN +I CK+G + E++ L +M +G PD
Sbjct: 616 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+T I+++ + +G ++ L+ EL+R G S+ +I L D
Sbjct: 676 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 151/358 (42%), Gaps = 20/358 (5%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPD-LVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L H+ G+ + N F E I+E D + Y I+ R + YR
Sbjct: 105 LRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVANDR--------NLSYRE 156
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ LV K +A LF M+H P ++ ++ L A K +
Sbjct: 157 RLRSGLVDI-----------KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 205
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+L +M GI + +T I++ + + +L A + + ++ + G + + LI
Sbjct: 206 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 265
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC + R A L++R+ + G+ P L N L+ LC A+A+LL D+MV+ +P+
Sbjct: 266 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 325
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY ++ C G++ A+ L+ +M E + D+ ++I+G C ++ A L
Sbjct: 326 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 385
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + +YN + F G +L + ++ PN +T +I S K
Sbjct: 386 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 443
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 219/439 (49%), Gaps = 23/439 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVEL--VKDCPHSVDVFQDLISCTEDCNWAYV 181
P Y +VH L+ + A+++L E+V V D V Q L C D
Sbjct: 147 PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSL--CLGD------ 198
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY-EEMGRIGICPNT 240
+ ++ + + L G + ++ + L++GL K +D+ + E+ R G P+
Sbjct: 199 ---RVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDI 255
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T++ + CK G ++ ++ EE P +TYN+LI YC+ G +++A L
Sbjct: 256 VTYSTVIDGLCKAG---RLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGK 312
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M N PD++TYTTLM+ CK G++ +A++LF +MV LSPD+V++ +L+ C EG+
Sbjct: 313 MVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGR 372
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+++ LL E+ G P +T +V GY K ++ A LV + + G + Y+
Sbjct: 373 MEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNI 432
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYV--PSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ C+ R A L+++ +G S+ +Y ++++LC+ DA+ +EM+
Sbjct: 433 LVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQ 492
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R P+ +T+ ++ C + +A L++EM++ G P C +++ YC + K
Sbjct: 493 RGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQK 552
Query: 539 AEALLGFFAKKFQIYDTES 557
A+ L A + ++Y +S
Sbjct: 553 ADEL----ASELRLYTDKS 567
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 189/396 (47%), Gaps = 6/396 (1%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D G P V N +L L ++++M +G +T +N++ H CK +D
Sbjct: 39 DRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLI-HPLCKARLLD 97
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ G L ++ G +P + +N +I C+ GRL A +YR M + PD +TYT L+
Sbjct: 98 EAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLV 156
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+GL K G++R+A Q+ MV PD + ++ + C ++ +++ L+ EM+ G+
Sbjct: 157 HGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMA 216
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVV-ELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+ T +V G K RL A+ L++ E+ R G + Y +I LC+ R A
Sbjct: 217 ANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 276
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+ E + P+ YN L+ C+ + +A+ L +MVD N P + TY L+ FC
Sbjct: 277 IFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFC 333
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+GR +A L +M+ + + PD L++G C E + A LL ++
Sbjct: 334 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY 393
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+YN V + + + + K EL F GF PN +T
Sbjct: 394 TYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVT 429
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 202/430 (46%), Gaps = 8/430 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G +R + +R+ D P ++ L++GL K + QV +EM P+
Sbjct: 127 RAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRI 300
T ++ C VD +E++ G + +TY+ L+ CK RL++A L
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ RR PD+VTY+T+++GLCK G++R+A +F M +P ++YN+LI YC+ G
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 302
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M E+ LL +M+ + PD T ++ + K GRL A L ++ +S +
Sbjct: 303 MDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTS 362
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC + R A LLE I + G P++ YN +++ CK + V A L + R
Sbjct: 363 LVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRG 422
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEM-LESGMLPDS-QICRVLINGYCMEKDVNK 538
P+ TY L+ C GR+ +A+ +D++ E G P S + ++++ C + +
Sbjct: 423 FVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDD 482
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ + ++ V + + EL + ++ G P TC ++
Sbjct: 483 AVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVS 542
Query: 599 SLWK-GMERK 607
+ + GM +K
Sbjct: 543 AYCRAGMIQK 552
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 11/293 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
++ PT+ Y ++ A+++L ++V+ +C V + L+S
Sbjct: 280 EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD--DNCAPDVITYTTLMS------- 330
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K+G + ++++ F++ + P +V+ L++GL ++ ++ EE+ R G P
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YL 297
+T+N + +CK+ V K + GF P+ VTYN L++ C+ GR + A YL
Sbjct: 391 TIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 450
Query: 298 YRIMYRRNVLPDLVT-YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ P V Y +++ LC++G+ +A Q + M+ RG P ++ T++FA C
Sbjct: 451 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 510
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
K + Q++ LL EM+ G P TC +V Y + G + A L EL+ +
Sbjct: 511 KAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 6/340 (1%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L++I + G PD V NT+++ C A L+ M + + TY L++ LC
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLC 91
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K + EA L M RG++P + +N +I C+ G+++ + +Y M + PD
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALG-VYRQMNDAHPPDFL 150
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T +V G K GRL A+ ++ E+ ++ +LC +R A L+E +
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADAL-LLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
G + Y+ L++ LCKC+ + +A+ LL E+ R P + TY +I C GR
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+AV + +EM P + LI GYC D+++A LLG D +Y
Sbjct: 271 LRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + F + G L EL ++ + +P+ +T ++ L
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 367
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL+ I G P N ++ LC A+ L D+M + + +TY LI C
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLC 91
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY--D 554
EA+ L+ +M GM P + + V+I G C + A LG + + + D
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHA---LGVYRQMNDAHPPD 148
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+Y + + ++ G L +++ + + P+N T ++ SL G
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLG 197
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 4/415 (0%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM----GRIGICPNTHTFNILT 247
R+ +G P+ S N LL GL N Q + M R G P+ ++ +
Sbjct: 154 ALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVI 213
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ + G +DK +++ ++G P+ +TYN L+ YC G+ +A ++R M R V
Sbjct: 214 NGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVE 273
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+VTY TLM LCK G+ EA ++F MV +G PD Y TL+ Y EG + + L
Sbjct: 274 PDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQL 333
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L M+ NG PD + I++ Y K G + A+ ++++ G+ + Y ++ ALC+
Sbjct: 334 LDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCR 393
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A S +R+ +G P+ ++ L+ LC CD A L EM+ R I P+
Sbjct: 394 VGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIF 453
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ L+ C G A ++ D M+ + D LI+GYC++ V++A LL
Sbjct: 454 FNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMV 513
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +YN + N + ++G + L ++ G P + ++H L++
Sbjct: 514 LDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQ 568
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 192/422 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G +E+ FRK G +P +V+ N L+ L K + +V++ M + G P
Sbjct: 250 GYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKP 309
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ + L H + G + +++ L+ + G PD +N LI +Y K G +++A +
Sbjct: 310 DSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAF 369
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P++VTY T+M+ LC+ GKV +A F R++ GL+P+ V + TLI C
Sbjct: 370 SKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCAC 429
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +++ L EM+G GI P+T ++ KEG + A N+ + R V Y
Sbjct: 430 DKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITY 489
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C D + AT LLE + DG P+ YN ++ CK + DA L +M
Sbjct: 490 TTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMAS 549
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P + Y ++ R A L M++ G+ +++ G C +
Sbjct: 550 KGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDD 609
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A + ++N + + + G + +L L G PN +T M+
Sbjct: 610 ALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMK 669
Query: 599 SL 600
SL
Sbjct: 670 SL 671
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 199/421 (47%), Gaps = 9/421 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP SS Y ++H A ++L +V H + F LI AY K
Sbjct: 308 KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYI--FNILIG-------AYAK 358
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G++ E+ F K G P+IV+ +++ L ++ +D ++ + G+ PN
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F L H C DK ++ G P+ + +NTL++ CK+G + A ++ +M
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMV 478
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R +V D++TYTTL++G C +GKV EA +L MV G+ P+ V+YNT+I YCK G+++
Sbjct: 479 RVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIE 538
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ SL +M G+ P I+ G + R+ +A L + + + G+ + Y+ ++
Sbjct: 539 DACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIIL 598
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LCQ+N A + + + +N ++++L K +A L ++ R +
Sbjct: 599 QGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 658
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY ++ G E L + ++G DS++ L+ + +V KA
Sbjct: 659 PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVY 718
Query: 543 L 543
L
Sbjct: 719 L 719
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 198/439 (45%), Gaps = 35/439 (7%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS ++NGLL+ +D+ + +++EM G+ PN T+N L H +C +G +
Sbjct: 201 GCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEA 260
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G K+ +G +PD+VTYNTL+ CK GR +A ++ M ++ PD Y TL++G
Sbjct: 261 IGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHG 320
Query: 320 LCKEGKVREAHQL-----------------------------------FHRMVHRGLSPD 344
EG + + HQL F +M +GL P+
Sbjct: 321 YATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPN 380
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
IV+Y T++ A C+ GK+ ++ S ++ G+ P+ + ++ G + A L V
Sbjct: 381 IVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAV 440
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+ G+ + ++ L+ LC++ A ++ + + + + Y L++ C
Sbjct: 441 EMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDG 500
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V +A L + MV +KP+ TY +I +C GR +A SL +M G+ P I
Sbjct: 501 KVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYS 560
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+++G + + A+ L + K +YN + ++ + + +
Sbjct: 561 TILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLI 620
Query: 585 GFAPNNLTCKYMIHSLWKG 603
F N T MI +L KG
Sbjct: 621 DFHLQNRTFNIMIDALLKG 639
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 188/451 (41%), Gaps = 79/451 (17%)
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++ M R +C T++I+ + G +D L ++ G+ +T++ L+ C
Sbjct: 87 LFNRMPRADLC----TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLC 142
Query: 287 KKGRLNDAF----------------YLYRIMY------------------------RRNV 306
R +DA + Y I+ R
Sbjct: 143 HDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGC 202
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD+V+YTT++NGL +EG++ +A+ LF M+ +G+SP+ ++YN L+ YC GK +E+
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262
Query: 367 LLYEMMGNGIYPDTFT--------CQ---------------------------IIVQGYG 391
+ +M +G+ PD T C+ ++ GY
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYA 322
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
EG L+ L+ + R G I++ LI A + A ++ Q G P++
Sbjct: 323 TEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIV 382
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y +M++LC+ V DA+ D ++ + P+ +R LI C + +A L EM
Sbjct: 383 TYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEM 442
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ G+ P++ L+N C E V +A+ + + D +Y + + + DG +
Sbjct: 443 IGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKV 502
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +L + + G PN +T +I+ K
Sbjct: 503 DEATKLLEGMVLDGVKPNEVTYNTIINGYCK 533
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 147/343 (42%), Gaps = 72/343 (20%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A +VG + ++ F + + G P+ V L++GL + D+ ++ EM GICP
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449
Query: 239 NTHTFNILTHVFCK-----------------------------------NGDVDKVNGFL 263
NT FN L + CK +G VD+ L
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLL 509
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
E + +G P+ VTYNT+I+ YCK GR+ DA L+R M + V P +V Y+T+++GL +
Sbjct: 510 EGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQT 569
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC--------------------------- 356
++ A +L+ M+ G+ I +YN ++ C
Sbjct: 570 RRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTF 629
Query: 357 --------KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
K G+ E+K L ++ G+ P+ T ++++ ++G L +L + L++
Sbjct: 630 NIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEK 689
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G + + + L+ L Q A L +I ++ + SLE
Sbjct: 690 NGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNF--SLE 730
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 120/315 (38%), Gaps = 46/315 (14%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
AH LF ++ R + I N+ + A +E S ++ + D T I++
Sbjct: 50 HAHHLFDELLRRD-TTSIFDLNSALSAVARE-----SPAVALSLFNRMPRADLCTYSIVI 103
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL-LERIGQDGY 446
+ G L A + + R G + + L+ LC D R A + L R+ G
Sbjct: 104 GCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGC 163
Query: 447 VPSLEIYNELMESLCKCDSVADAL----------------------------LLK----- 473
P+ YN L++ LC + AL LL+
Sbjct: 164 TPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLD 223
Query: 474 ------DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
DEM+D+ + P+ TY L+ +C G+ EA+ + +M G+ PD L+
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLM 283
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
C +A + KK D+ Y + + +A +G L ++ +L +R G
Sbjct: 284 VYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQ 343
Query: 588 PNNLTCKYMIHSLWK 602
P++ +I + K
Sbjct: 344 PDHYIFNILIGAYAK 358
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + I + N +L GL + NC D +++ + I TFNI+ K G D+
Sbjct: 586 GIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEA 645
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ G P++VTY ++ S ++G L + L+ + + D L+
Sbjct: 646 KDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGK 705
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
L ++G+VR+A ++ S + + +L+F
Sbjct: 706 LPQKGEVRKAGVYLSKIDENNFSLEASTAESLVF 739
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 202/416 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP +V+ ++NGL K D + + +M + + P + +
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CKN +D +++E +G P++VTY++LIS C GR +DA L M R +
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T++ L++ KEGK+ EA +L+ MV R + P IV+Y++LI +C ++ E+K +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD + +++G+ K R+ + L E+ + G+ + Y LI L Q
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + DG P++ YN L++ LCK + A+++ + + ++P++ T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ PD +I+G+C + +A+AL
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ YN + DGD EL K GFA + T + + L G
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 198/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D + E+M +G+ N +T++IL + FC+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P++VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y ++ CK G + LL +M + P
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P + ++ L+++ K + +A L DEMV R+I PS+ TY +LI FC R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ PD LI G+C K V++ L +++ + +T +Y +
Sbjct: 379 EAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD E+ K + G PN +T ++ L K
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 218/474 (45%), Gaps = 9/474 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L PH+ + LI+C C + + +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL--GMPHNHYTYSILINCF--CRRSQLPL 134
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L K + +G++P+IV+ + LLNG I + + ++M G PNT TF
Sbjct: 135 AL-----AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF 189
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H + + ++++ +G PDLVTY +++ CK+G + AF L M +
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQ 249
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P ++ YTT+++GLCK + +A LF M +G+ P++V+Y++LI C G+ +
Sbjct: 250 GKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL +M+ I PD FT ++ + KEG+L+ A L E+ + + S Y LI
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C +R A + E + P + Y+ L++ CK V + + L EM R +
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY LI G A + EM+ G+ P+ L++G C + KA +
Sbjct: 430 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + +YN + + G + +L G P+ + MI
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 188/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
NGL +L +D ++ EM + P+ F+ L K D V E+++ G
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ TY+ LI+ +C++ +L A + M + P++VT ++L+NG C ++ EA L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M G P+ V++NTLI K E+ +L+ M+ G PD T ++V G K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G A L+ ++++ + IY +I LC++ A +L + + G P++
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LC +DA L +M++R I P + T+ ALI F G+ EA L DEM+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P LING+CM +++A+ + F K D SY+ + F + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ MEL + + G N +T +I L++
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQA 444
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 158/326 (48%), Gaps = 9/326 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P Y ++ L ++S A ++L +++E + V F LI A+V
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPDVFTFSALID-------AFV 337
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K + + + PSIV+ + L+NG + +D+ Q++E M P+
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+++ L FCK VD+ ++ + G + VTY TLI + G + A +++ M
Sbjct: 398 SYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM 457
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P+++TY TL++GLCK GK+ +A +F + + P I +YN +I CK GK+
Sbjct: 458 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 517
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L + G+ PD ++ G+ ++G A L E++ G + Y+ L
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 422 IVALCQDNRPFAATSLLERIGQDGYV 447
I A +D A+ L++ + G+
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFA 603
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 10/275 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P+ Y +++ +++ A +M +V K C V + LI +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS--KHCFPDVVSYSTLIK-------GFC 407
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + E + FR+ G + V+ L+ GL + D ++++EM G+ PN
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L CKNG ++K E ++ +P + TYN +I CK G++ D + L+ +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+V Y T+++G C++G EA LF M G P+ YNTLI A ++G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ S L+ EM G D T ++ +GRL
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTNML-HDGRL 621
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 199/404 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K D + + +M + + P +N + CK +D
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++E +G P++VTY++LIS C GR +DA L M R + PD+ T++ L++
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
KEGK+ EA +L+ MV R + P IV+Y++LI +C ++ E+K + M+ +PD
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G+ K R+ + + E+ + G+ + Y+ LI L Q A + +
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ DG P++ YN L++ LCK + A+++ + + ++P++ TY +I C G
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ + L + G+ PD +I+G+C + +A+AL + + ++ YN
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ DGD EL K GFA + T + + L G
Sbjct: 371 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 414
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 189/385 (49%), Gaps = 1/385 (0%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F K +P ++ N +++GL K +D +++EM GI PN T++ L
Sbjct: 35 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 94
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G + L + E +PD+ T++ LI ++ K+G+L +A LY M +R++ P
Sbjct: 95 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 154
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+VTY++L+NG C ++ EA Q+F MV + PD+V+YNTLI +CK +++E +
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ +T T I++QG + G A + E+ GV + Y+ L+ LC++
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A + E + + P++ YN ++E +CK V D L + + +KP + Y
Sbjct: 275 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 334
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I FC G EA +L EM E G LP+S LI + D + L+
Sbjct: 335 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 394
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSK 573
D + V NM DG L K
Sbjct: 395 CGFAGDASTIGLVTNML-HDGRLDK 418
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%)
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
++++ +G PDLVTY +++ CK+G + AF L M + + P ++ Y T+++GL
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK + +A LF M +G+ P++V+Y++LI C G+ ++ LL +M+ I PD
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT ++ + KEG+L+ A L E+ + + S Y LI C +R A + E
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ P + YN L++ CK V + + + EM R + + TY LI G
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A + EM+ G+ P+ L++G C + KA + + + +YN
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G + +L G P+ + MI +
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 343
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 158/326 (48%), Gaps = 9/326 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P Y ++ L ++S A ++L +++E + V F LI A+V
Sbjct: 82 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE--RKINPDVFTFSALID-------AFV 132
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ K + + + PSIV+ + L+NG + +D+ Q++E M P+
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FCK V++ ++ + G + VTYN LI + G + A +++ M
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P+++TY TL++GLCK GK+ +A +F + + P I +YN +I CK GK+
Sbjct: 253 VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKV 312
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L + G+ PD ++ G+ ++G A L E++ G + Y+ L
Sbjct: 313 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 372
Query: 422 IVALCQDNRPFAATSLLERIGQDGYV 447
I A +D A+ L++ + G+
Sbjct: 373 IRARLRDGDREASAELIKEMRSCGFA 398
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 10/275 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P+ Y +++ +++ A +M +V K C V + LI +
Sbjct: 152 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS--KHCFPDVVTYNTLIK-------GFC 202
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + E + FR+ G + V+ N L+ GL + D ++++EM G+ PN
Sbjct: 203 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 262
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L CKNG ++K E ++ +P + TYN +I CK G++ D + L+ +
Sbjct: 263 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 322
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+V Y T+++G C++G EA LF M G P+ YNTLI A ++G
Sbjct: 323 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 382
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ S L+ EM G D T ++ +GRL
Sbjct: 383 EASAELIKEMRSCGFAGDASTIGLVTNML-HDGRL 416
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/587 (26%), Positives = 269/587 (45%), Gaps = 71/587 (12%)
Query: 69 LKKGDSHLTLLQNDLKPLLPH-LGAHEI--------------SRVLLRCQSDS--VSALT 111
LK+G S L +Q KPL+P L ++ I S VL R ++D S L
Sbjct: 3 LKEGRSLLMKIQ---KPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLG 59
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
FF+ + N + T+S Y +++ L + M M+ +++ +K ++ +DL
Sbjct: 60 FFSAIANSNAFQHTASTYRVMIERLGRECE----MDMVQYILQQMK--MDGINCCEDLFI 113
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C + Y +VG ++ K F + + G +P++ N LL+ LL N +Y M
Sbjct: 114 CIIN---GYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+ G+ PN T+NIL CKN VD + ++ +G PD VTY T++SS CK G++
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+DA R + R P + Y L++G+CKEG++ A +L M+ G+ P++VSY+ +
Sbjct: 231 DDA----RELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I + C G ++ + +L +M G + T +++G G+L AL+L + + G
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGC 345
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ Y+ LI LC + A + +++ + G +P++ Y+ L++ K + A
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ M+ +P++ TY ++ C +A SL+++M G P++ I G C
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465
Query: 532 MEKDV--------------------------------NKAEALLGFF----AKKFQIYDT 555
V NK E G F A+ Q +
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ-PNL 524
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN V F+ G + + ++L + L G AP+++T MIH+ K
Sbjct: 525 VTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 226/482 (46%), Gaps = 15/482 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++ L N++ A K+ E+ K CP + ++S + K
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSN--KGCPPDAVTYTTMVS-------SLCKA 227
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ + L F+PS+ N L++G+ K I+ ++ EM G+ PN ++
Sbjct: 228 GKIDDA-----RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + + C +G+V+ ++ G D ++ T+ LI +G+L +A L+++M +
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++V Y TL++GLC G + EA Q+ +M G P++ +Y+ LI + K G +
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ M+ +G P+ T +V K A +LV ++ G + + ++ I
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIK 462
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC + R A LLER+ G +P++ YNEL+++L + + +A L E+ RN++P
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQP 522
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L TY ++ F G GEA+ L + L G PDS +I+ YC + V A L+
Sbjct: 523 NLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 544 GFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + D +Y ++ ++ + M + + G PN T ++ +
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642
Query: 603 GM 604
+
Sbjct: 643 SL 644
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 139/302 (46%), Gaps = 45/302 (14%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++H L N A++ +C+ ++ C +V + LI + K
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQ-VCDQMQR-SGCLPNVTTYSILID-------GFAK 396
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + + +T+ + + G +P++V+ +++ L K + DQ + E+M G PNT T
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTIT 456
Query: 243 FNILTHVFCKNGDVD-----------------------------KVN------GFLEKIE 267
FN C NG V+ ++N G ++IE
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
P+LVTYNT++ + + G + +A L+ R PD +TY T+++ CK+GKV+
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576
Query: 328 EAHQLFHRMVH-RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A QL R+ + PDI++Y +LI+ C ++E+ + L + + GI P+ T +
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Query: 387 VQ 388
V+
Sbjct: 637 VR 638
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 233/496 (46%), Gaps = 47/496 (9%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FF+ + NDL K T ++ +++++ FS+A K
Sbjct: 143 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF-------------------- 182
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
Y+ V F K GFQP++++ N ++ L KL ID+ +
Sbjct: 183 -----------YLHV------FGANSK----GFQPNLLTYNLIIKALCKLGQIDRAVDTF 221
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
EM P+ T++ L + CK VD+ L++++ EG P+ VT+N LI + K
Sbjct: 222 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 281
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G L+ A L M+ + +P+ VTY TL++GLC +GK+ +A L +MV P+ V+Y
Sbjct: 282 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 341
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
T+I K+ + ++ +L M G + + ++ G KEG+ +A+ L E+
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 401
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G + +Y I LC+D +P A +L+ + G++P+ Y+ LM+ K
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 461
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+L+ EM+ ++++ ++ L+ C GR EA+++ ML G+ PD +I
Sbjct: 462 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 521
Query: 529 GYCMEKDVNKAEALLGFFAKKFQ----IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
G C V+K L F+ + Q D +YN +FN +L++ ++L L
Sbjct: 522 GLCDVGSVDKGLKL--FYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 579
Query: 585 GFAPNNLTCKYMIHSL 600
G P++LTC + +L
Sbjct: 580 GCDPDSLTCNIFLETL 595
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 158/366 (43%), Gaps = 6/366 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL--NDAFYLYR 299
TF L + + + ++ L++++ EG + LI C K L + +R
Sbjct: 91 TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIF-ILIFKACGKAHLPGEAVNFFHR 149
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV---HRGLSPDIVSYNTLIFAYC 356
+ + + ++ +++N + +EG A + + + +G P++++YN +I A C
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 209
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G++ + EM PD FT ++ G KE R+ A+ L+ E+Q G +
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 269
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++ LI AL ++ A L++ + G VP+ YN L+ LC + AL L ++M
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V P+ TY +I R+ + V ++ M E G + I LI+G E
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A L A+K + Y A + D + ++ + L GF PN T +
Sbjct: 390 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 449
Query: 597 IHSLWK 602
+ +K
Sbjct: 450 MKGFFK 455
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 197/403 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+I + + L+N LN + + V ++ ++G P+T TF L G + +
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEA 150
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ EGF PD+VTY TLI+ CK G + A L M ++N P++ Y T+++
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF MV +G+SPDI +YN+LI A C + + +LL EM+ + I PD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ +V KEG++ A ++V ++ + GV + Y L+ C + A + +
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G +P++ YN L+ CK + A+ L EM + + P TY LI C +
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 390
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R +A++L EM+ +P+ R+L++ C + + +A ALL D + N
Sbjct: 391 RLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNN 450
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G+L +L G P+ T MI+ L +
Sbjct: 451 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 493
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 194/417 (46%), Gaps = 35/417 (8%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I + +F + L + PS V N LL + K+ + +M GI PN +T +I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC V L KI + G PD T+ TLI +G++ +A +L+ M
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+VTY TL+NGLCK G A +L MV + P++ +YNT+I + CK+ ++ E+
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+L EM+ GI PD FT Y+ LI AL
Sbjct: 222 NLFSEMVTKGISPDIFT-----------------------------------YNSLIHAL 246
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C +LL + +P + +N ++++LCK V +A + D+M+ R ++P++
Sbjct: 247 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNV 306
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY AL+ C + EAV + D M+ G +P+ LINGYC + ++KA L G
Sbjct: 307 VTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 366
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ I DT +Y+ + + L + L + PN +T + ++ L K
Sbjct: 367 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 423
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 216/481 (44%), Gaps = 13/481 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P ++++ N+ FA +L ++++L H D F LI
Sbjct: 92 IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL----GHQPDTATFTTLI------RGI 141
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
YV+ G I E+ F K + GF+P +V+ L+NGL K+ ++ M + PN
Sbjct: 142 YVE-GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPN 200
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+N + CK+ V + ++ +G PD+ TYN+LI + C L
Sbjct: 201 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 260
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M ++PD+V++ T+++ LCKEGKV EAH + +M+ RG+ P++V+Y L+ +C
Sbjct: 261 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLS 320
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M E+ + M+ G P+ + ++ GY K R+ A+ L E+ R + Y
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 380
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC R A +L + +P+L Y L++ LCK +A+A+ L +
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P + I C G A L + G+ PD ++ING C +++A
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L + + YN + F + + S+ ++L + + GF+ + T +
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560
Query: 600 L 600
L
Sbjct: 561 L 561
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 154/360 (42%), Gaps = 35/360 (9%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+++N S ++ A + M R P V + L+ + K L H+
Sbjct: 27 LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G+ P+I + + LI ++C ++ + S+L +++ G PDT T +++G EG+
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL+L ++ G Y LI LC+ AA LL + Q P++ YN
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++SLCK V +A L EMV + I P + TY +LI C + +L++EM++S
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 516 MLPDSQICRVLINGYCMEKDVNKA-------------------------EALLGFFAKKF 550
++PD +++ C E V +A LL +
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 551 QIYDTE----------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+++DT SYN + N + + + K M L R P+ +T +IH L
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 386
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 139/326 (42%), Gaps = 38/326 (11%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVD--VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL 197
N A+ LCE + VD + D++S + A K G + E+ K +
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD-ALCKEGKVTEAHDVVDKMI 298
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
G +P++V+ L++G L+ +D+ +V++ M G PN ++N L + +CK +D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
K ++ + PD VTY+TLI C RL DA L+ M + +P+LVTY L+
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 418
Query: 318 N-----------------------------------GLCKEGKVREAHQLFHRMVHRGLS 342
+ G+C+ G++ A LF + +GL
Sbjct: 419 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 478
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD+ +Y+ +I C+ G + E+ L EM NG + I +G+ + A+ L
Sbjct: 479 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 538
Query: 403 VVELQRFGVSISRDIYDYLIVALCQD 428
+ E+ G S + L D
Sbjct: 539 LQEMVARGFSADASTMTLFVKMLSDD 564
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 35/242 (14%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K F + G P+++S N L+NG K+ ID+ ++ EM R + P+T T++ L
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLI 383
Query: 248 H-----------------------------------VFCKNGDVDKVNGFLEKIEEEGFD 272
H CKN + + L+ IE D
Sbjct: 384 HGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLD 443
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+ N I C+ G L A L+ + + + PD+ TY+ ++NGLC+ G + EA +L
Sbjct: 444 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 503
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F M G + + YNT+ + + + + LL EM+ G D T + V+
Sbjct: 504 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 563
Query: 393 EG 394
+G
Sbjct: 564 DG 565
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++++ F + + P++V+ LL+ L K + + + + + + P+ NI
Sbjct: 392 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 451
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
C+ G+++ + +G PD+ TY+ +I+ C++G L++A L+R M
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ Y T+ G + + A QL MV RG S D + + +G Q K
Sbjct: 512 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK 571
Query: 366 SLLYE 370
+L E
Sbjct: 572 QILRE 576
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 186/358 (51%), Gaps = 9/358 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ +VGL+ E+ + + L VG P++ +CN LLNGLLK + D W++Y M + P
Sbjct: 128 AFSEVGLVDEALRVY---LKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFP 184
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+N+L C+ GDV + + ++ ++G +P +V Y TLI C + +L +A ++
Sbjct: 185 TVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMF 244
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M V P+L TY LM+G CK V++A L+ M+ GL P++V++ LI A CK
Sbjct: 245 RQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKV 304
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ +M G+ P+ ++ GY K G A +L++E+++F +S Y
Sbjct: 305 RELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTY 364
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL-LLK---- 473
LI C+ A +L+R+ ++G + +YN L++ CK ++ AL + K
Sbjct: 365 SILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKF 424
Query: 474 -DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+M ++P Y ++ + + L +M++ G++P+ +V+ GY
Sbjct: 425 FSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGY 482
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 180/381 (47%), Gaps = 23/381 (6%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N F +L F + G VD+ K+ G P + N L++ KK + + LY
Sbjct: 118 NPSVFGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNALLNGLLKKSSFDIMWELY 174
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P +VTY L++ C++G V A L MV +G+ P +V Y TLI C E
Sbjct: 175 NNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSE 234
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ E++S+ +M +G++P+ +T +++ GY K + AL+L + G+ + +
Sbjct: 235 SKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTF 294
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI ALC+ AA ++ + G VP++ ++N L++ K + ++A L EM
Sbjct: 295 GILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEK 354
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P + TY LI C +G EA ++ M + G+ +S + LI+GYC E ++ K
Sbjct: 355 FKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEK 414
Query: 539 AEALLGFFAKKF--------QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
A + F A KF D +Y + ++ +M L +++G PN
Sbjct: 415 ALEI--FKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNE 472
Query: 591 LTCK----------YMIHSLW 601
+T + Y+ +LW
Sbjct: 473 VTSQVVRRGYQDNGYLKSALW 493
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 15/285 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+PT Y ++H L +K A M ++ KD VF +L + + Y
Sbjct: 217 IEPTVVIYTTLIHGLCSESKLMEAESMFRQM----KDS----GVFPNLYTYNVLMD-GYC 267
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K ++++ ++ LD G QP++V+ L++ L K+ + + + +M + G+ PN
Sbjct: 268 KTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVV 327
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L + K G+ + L ++E+ PD+ TY+ LI + C+ G + +A + + M
Sbjct: 328 VFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRM 387
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR------MVHRGLSPDIVSYNTLIFAY 355
+ V + V Y +L++G CKEG + +A ++F M GL PD ++Y ++ +
Sbjct: 388 EKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGH 447
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
M + L +M+ GI P+ T Q++ +GY G L SAL
Sbjct: 448 LNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSAL 492
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 12/252 (4%)
Query: 360 KMQESKSLLYEMMGNGIYPDTFTC------QIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
K+ ++++ + G +YP T C Q ++Q R +++L Q G
Sbjct: 61 KLHLYSAVIHYLTGAKVYP-TARCLTKDLIQTLLQSCTP--RRVNSLVFNALSQLRGSKF 117
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ ++ LI+A + A + ++G P+++ N L+ L K S L
Sbjct: 118 NPSVFGVLIIAFSEVGLVDEALRVYLKVGA---FPAVQACNALLNGLLKKSSFDIMWELY 174
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+ MV R + P++ TY L+ C G A SL+ EM++ G+ P I LI+G C E
Sbjct: 175 NNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSE 234
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ +AE++ + +YN + + + + ++ + + L + L G PN +T
Sbjct: 235 SKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTF 294
Query: 594 KYMIHSLWKGME 605
+I +L K E
Sbjct: 295 GILIDALCKVRE 306
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 249/528 (47%), Gaps = 38/528 (7%)
Query: 102 CQSDSVS-ALTFFNWVKNDLE------IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
CQ+ ++ AL + ND I+P + +++ IL K A ++L +++
Sbjct: 316 CQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQ 375
Query: 155 LVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+ C + + LI C E I E+ F +G +P ++ L+
Sbjct: 376 --RGCILDIVTYSTLIKGLCMEH---------RISEATWLFMSMQKLGCRPDAITYGTLM 424
Query: 213 NGLLKLNCIDQCWQVYEEM----GRIGI-C-PNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
GL + I+ Q+++EM GR GI C P +++I+ CK+ D+ E++
Sbjct: 425 KGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ +G PD+++Y TLI +C G+ A L+ M + PD+ T + L++ LCK+GKV
Sbjct: 485 KAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKV 544
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA++L ++ RG D+V+ TL+ C + ++ ++ L +M G P+ TC +
Sbjct: 545 IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 604
Query: 387 VQGYGKEGRLLSAL----NLVVELQRFGVSISRDIYDYLIV--ALCQDNRPFAATSLLER 440
++G + G + AL N++ + +G++ + Y I+ LC+ R A L +
Sbjct: 605 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 664
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G +P + Y L+ C+ DA L +EMVD ++P ++T+ LI C G+
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 724
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L++ M++ G +P++ L+ G CM +++A L K + D +Y
Sbjct: 725 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 784
Query: 561 VFNMFAEDGDLSKLMELQKRFLR------LGFAPNNLTCKYMIHSLWK 602
+ + G++ +EL K+ L F P+ ++ +I L K
Sbjct: 785 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCK 832
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 206/412 (50%), Gaps = 13/412 (3%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P+++S + +++GL K D+ ++++EM G+ P+ ++ L H FC +G +K
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
++ + G PD+ T LI +CK+G++ +A L +M R + D+VTY+TL+ GLC
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLC 281
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG------ 375
+ ++ EA QLF M G PD ++Y TL+ C+ GK+ + L EM+ +
Sbjct: 282 MKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIK 341
Query: 376 -IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
I PD T +++ KEG+++ A L+ + + G + Y LI LC ++R A
Sbjct: 342 CIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA 401
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN------IKPSLSTY 488
T L + + G P Y LM+ LC+ ++ AL L EM++ KP+L +Y
Sbjct: 402 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 461
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I C R EA L +EM G++PD LI+G+C+ KA+ L
Sbjct: 462 SIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 521
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D + + + +M + G + + +L + ++ G + +TC ++ L
Sbjct: 522 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 153/575 (26%), Positives = 259/575 (45%), Gaps = 37/575 (6%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAH---EISRVLLR--CQ 103
Y+ P+ + ++D++C K + N+L ++ G L++ C
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGK------VIEANELLEVMIQRGCILDIVTYSTLIKGLCM 101
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
+S T+ L +P + Y ++ L + A+++ E+ L + +
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM--LNDTGRYGI 159
Query: 164 DVFQDLISCTEDCNWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
LIS ++ + GL + E+ + F++ G P ++S L++G
Sbjct: 160 KCKPTLIS------YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHS 213
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
++ ++ EM +GI P+ T +L +FCK G V + N LE + G D+VTY
Sbjct: 214 GKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTY 273
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+TLI C K R+++A L+ M + PD + Y TLM GLC+ GK+ A L M++
Sbjct: 274 STLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333
Query: 339 -------RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ + PD+ + + LI CKEGK+ E+ LL M+ G D T +++G
Sbjct: 334 DTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 393
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL----LERIGQDGY- 446
E R+ A L + +Q+ G Y L+ LCQ A L L G+ G
Sbjct: 394 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIK 453
Query: 447 -VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+L Y+ +++ LCK +A L +EM + I P + +Y LI FC G+ +A
Sbjct: 454 CKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 513
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L +EML+ G+ PD VLI+ C + V +A LL ++ I D + +
Sbjct: 514 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGL 573
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+SK +L + +LG PN +TC ++ L
Sbjct: 574 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 608
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 239/492 (48%), Gaps = 27/492 (5%)
Query: 102 CQSDSVS-ALTFFNWVKND-----LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
CQ+ +++ AL + ND ++ KPT +Y +I+ L + + A ++ E+
Sbjct: 428 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM--- 484
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+ + D+IS T + + G ++ F + LDVG QP + + + L++ L
Sbjct: 485 -----KAQGIMPDVISYTTLIH-GFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K + + ++ E + + G + T L C + K K+++ G P++
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 598
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIM------YRRNVLPDLVTYTTLMNGLCKEGKVREA 329
VT TL+ C+ G + A L++ M Y N P+ ++Y+ +++GLCK G+ EA
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 658
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+LF M G+ PD++SY +LI +C+ GK +++K L EM+ G+ PD T +++
Sbjct: 659 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 718
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
KEG+++ A L+ + + G + Y L+ LC ++R AT L ++ + G +P
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVD------RNIKPSLSTYRALICCFCGIGRSGE 503
+ Y LM+ LC+ ++ AL L +M+ N KP + +Y +I C GR E
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L EM G++P+ LI+G+C + A+ L + + +Y+ + +
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898
Query: 564 MFAEDGDLSKLM 575
F ++G + K +
Sbjct: 899 GFCKEGQIDKAL 910
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 135/522 (25%), Positives = 231/522 (44%), Gaps = 33/522 (6%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C +S T+ L +P + Y ++ L + A+++ E+ L +
Sbjct: 393 CMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEM--LNDTGRY 450
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ LIS ++ + GL + E+ + F + G P ++S L++G
Sbjct: 451 GIKCKPTLIS------YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGF- 503
Query: 217 KLNCIDQCWQ----VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
C+ W+ ++ EM +GI P+ T ++L + CK G V + N LE + + G
Sbjct: 504 ---CLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
D+VT TL+ C K R++ A L+ M + +P++VT TLM GLC+ G ++ A +L
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620
Query: 333 FHRMVHR----GLS--PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
M+ G++ P+ +SY+ +I CK G+ E++ L EM G+ PD + +
Sbjct: 621 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 680
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ + G+ A L E+ GV + LI LC++ + A LLE + Q G
Sbjct: 681 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGC 740
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P+ Y L++ LC D +++A L +M P + TY L+ C G A+
Sbjct: 741 IPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALE 800
Query: 507 LMDEMLE------SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
L +ML + PD ++I+G C ++A L I + SY +
Sbjct: 801 LHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTS 860
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + F G L L + G N +T MIH K
Sbjct: 861 LIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCK 902
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 42/359 (11%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT---------LISSY 285
G+ P++ TFNIL + C V++ + I G+ PD+VTY+ LI
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK+G++ +A L +M +R + D+VTY+TL+ GLC E ++ EA LF M G PD
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++Y TL+ C+ G + + L EM+ +
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLND------------------------------- 153
Query: 406 LQRFGVSISRDIYDYLIV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
R+G+ + Y I+ LC+D R A L + + G +P + Y L+ C
Sbjct: 154 TGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHS 213
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
A L +EM+D I+P ++T LI FC G+ EA L++ M+ G + D
Sbjct: 214 GKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTY 273
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI G CM+ +++A L K D +Y + + G ++ + L + L
Sbjct: 274 STLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 115/308 (37%), Gaps = 67/308 (21%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD T+ L+N LC +V E ++ RG PDIV+Y+
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS----------- 49
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
I PD T +++ KEG+++ A L+ + + G + Y
Sbjct: 50 ---------------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 94
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC ++R AT L + + G P Y LM+ LC+ ++ AL L EM++
Sbjct: 95 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154
Query: 481 ------IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
KP+L +Y ++I+G C ++
Sbjct: 155 GRYGIKCKPTLISYS-----------------------------------IIIDGLCKDR 179
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++A L + + D SY ++ + F G K L L +G P+ T
Sbjct: 180 REDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSG 239
Query: 595 YMIHSLWK 602
+I K
Sbjct: 240 VLIDMFCK 247
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 147/587 (25%), Positives = 258/587 (43%), Gaps = 85/587 (14%)
Query: 92 AHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSS-NYCLIVHILAWNNKFSFAMKMLC 150
A +++ ++L D L FF+WV P + Y ++ +LA + FS M+++
Sbjct: 59 ASDVAHLVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFS-EMEVVL 117
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCN 209
E + + + P + + +I AY GL+ ++ + + L + P +++CN
Sbjct: 118 ENMRVEEMSP-TREAMSIVIQ-------AYSDSGLVEKALELYYFVLKTYTYFPDVIACN 169
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRI------------------GIC-------------- 237
LLN L+KL I+ ++Y+EM I G+C
Sbjct: 170 SLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIED 229
Query: 238 -------PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
PN +N L +CK GD++ NG +++ +GF P + TY +I+ +CKKG
Sbjct: 230 RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGD 289
Query: 291 LNDAFYLYRIMYRRNVL-----------------------------------PDLVTYTT 315
L M R + PD+VTY T
Sbjct: 290 FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 349
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L++G C++GKV EA QL + + +GL P+ SY LI AYCK+G + + L EM G
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD T +V G G + AL + ++ GV IY+ L+ LC+ + AA
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
LL + +P +Y L++ + ++ +A L + +++ + P + Y A+I +
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G +A++ ++ M + + PD +I+GY + D++ A+ + K +
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+Y ++ N F GDL + +++ + G PN +T +I S K
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCK 636
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/542 (23%), Positives = 220/542 (40%), Gaps = 93/542 (17%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y I++ F ++L E+ + +V V+ +I A K
Sbjct: 272 PTVETYGAIINGFCKKGDFKAIDRLLMEMNS--RGLTVNVQVYNTIID-------ARYKH 322
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ +T ++ G +P IV+ N L++G + + + Q+ E+ G+ PN ++
Sbjct: 323 GHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY 382
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY------------------------- 278
L H +CK G D+ + +L ++ E G PDLVTY
Sbjct: 383 TPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLE 442
Query: 279 ----------NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
N L+S CKK +L A L M ++VLPD Y TL++G + G + E
Sbjct: 443 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +LF + +G++P IV YN +I YCK G M+++ + + M + PD FT ++
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 562
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY K+ L A + E+ + + Y LI C+ + + + G VP
Sbjct: 563 GYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVP 622
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEM-------------------------------- 476
++ Y+ L+ S CK + DA +EM
Sbjct: 623 NVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGN 682
Query: 477 -----------------VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ P + Y +++ C C G A+ L ++M G +PD
Sbjct: 683 EFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPD 742
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
S L++G C+E + + ++ + ++ +Y+++ + + G + LQ
Sbjct: 743 SVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEASVILQT 802
Query: 580 RF 581
F
Sbjct: 803 MF 804
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 23/257 (8%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y ++ + A KM E+V++ C +V + LI+ +
Sbjct: 550 LAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM--KCKPNVVTYTSLIN-------GFC 600
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + S K FR+ G P++V+ + L+ K + +EEM PN
Sbjct: 601 RKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDV 660
Query: 242 TFNILTHVFCKNGD---VDKVNGFLE-----------KIEEEGFDPDLVTYNTLISSYCK 287
TFN L + F KNG +K N F E ++ +G+ P YN+++ C+
Sbjct: 661 TFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQ 720
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G A L M + +PD V++ L++G+C EG+ +E + ++ V+
Sbjct: 721 YGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVN 780
Query: 348 YNTLIFAYCKEGKMQES 364
Y++++ Y +G + S
Sbjct: 781 YSSILDQYLPQGTSEAS 797
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 194/402 (48%), Gaps = 1/402 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ + +++G + ++ EM R G+ P+ T+N++ CK +DK
Sbjct: 263 PDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELV 322
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ +G PD VTY+ +I Y GRL +A ++R M +R ++P++VT + + LCK
Sbjct: 323 LRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCK 382
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ +EA + F M +G PDI SY TL+ Y EG + L M NGI +
Sbjct: 383 HGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHV 442
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ Y K G + A+ + E+Q+ GVS Y +I + R A ++
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI-KPSLSTYRALICCFCGIGRS 501
G P+ +Y+ +++ C + A L EM+++ I +P + + ++I C GR
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRV 562
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A + D + G P LI+GYC+ ++KA +L D +YN +
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTL 622
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++G ++ + L + R G PN +T M+ L++
Sbjct: 623 LDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 214/490 (43%), Gaps = 51/490 (10%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN---WA 179
+P + Y ++H A + A KM E+ + + LI CN +
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKK------------RGLIPNIVTCNSFLAS 379
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K G +E+ + F G +P I S LL+G C ++ M GI N
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN 439
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
H F IL H + K G VD +++++G PD+VTY+T+IS++ + GRL DA +
Sbjct: 440 CHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKE 358
M R + P+ Y++++ G C G + +A +L M+++G+ PDIV ++++I + CK+
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559
Query: 359 G-----------------------------------KMQESKSLLYEMMGNGIYPDTFTC 383
G KM ++ +L M G+ PD T
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GY K GR+ L L E+QR GV + Y ++ L + R AA + +
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE 679
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G ++ IY ++ LC+ + +A++L ++ N+K S++ +I + R E
Sbjct: 680 SGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEE 739
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L + SG+LP+ V+I + V A + K + + N +
Sbjct: 740 AKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIR 799
Query: 564 MFAEDGDLSK 573
M E G+++K
Sbjct: 800 MLLEKGEIAK 809
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 224/458 (48%), Gaps = 14/458 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAY 180
KP +YC ++H A F+ + + + + +C VF LI AY
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANC----HVFTILI-------HAY 450
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G++ ++ F + G P +V+ + +++ ++ + + + +M GI PNT
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ + FC +G + K + ++ +G PD+V ++++I+S CK GR+ DA ++
Sbjct: 511 AVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD 570
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ P ++T+ +L++G C GK+ +A ++ M G+ PDIV+YNTL+ Y K G
Sbjct: 571 LATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNG 630
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + +L EM G+ P+T T I++ G + GR ++A E+ G +++ IY
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC++N A L +++G S+ I N ++ ++ K +A L +
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ STY +I G +A ++ M +SG++P S++ +I + ++ KA
Sbjct: 751 GLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L K + + + + + ++F+ G + ++L
Sbjct: 811 GNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKL 848
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 201/443 (45%), Gaps = 8/443 (1%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
++L P + +Y +++ L N+ A+ +L + + C V + +I
Sbjct: 220 SELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVI------- 272
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ G ++ F + G +P +V+ N +++ L K +D+ V +M G
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+T T++ + H + G + + ++++ G P++VT N+ ++S CK GR +A
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M + PD+ +Y TL++G EG + LF+ M G++ + + LI AY K
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK 452
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++ + EM G+ PD T ++ + + GRL A+ ++ G+ + +
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAV 512
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEM 476
Y +I C A L+ + G P + ++ ++ SLCK V DA + D
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLA 572
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
D +P + T+ +LI +C +G+ +A ++D M G+ PD L++GY +
Sbjct: 573 TDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRI 632
Query: 537 NKAEALLGFFAKKFQIYDTESYN 559
N L +K +T +Y
Sbjct: 633 NDGLTLFREMQRKGVKPNTVTYG 655
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 146/352 (41%), Gaps = 26/352 (7%)
Query: 267 EEEGFD---PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
EE G P TYN L+ C+ R + L+ + R + D +T TL+ LC
Sbjct: 146 EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYA 205
Query: 324 GKVREA-HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM--MGNGIYPDT 380
+ EA + L HRM G P+ VSY+ ++ A C Q + LL M G PD
Sbjct: 206 NRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDV 265
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
++ G+ EG A +L E+ R GV Y+ +I ALC+ A +L +
Sbjct: 266 VAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ DG P Y+ ++ + +A + EM R + P++ T + + C GR
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
S EA D M G PD L++GY E G FA ++++ N
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASE----------GCFADMIGLFNSMKSNG 435
Query: 561 V----------FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +A+ G + M + + G +P+ +T +I + +
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSR 487
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 8/186 (4%)
Query: 426 CQDNRPFAATSLLERI-----GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
C + P A +L R+ G VP+ YN LM+ C+ L L ++
Sbjct: 128 CITDGPALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTG 187
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVS-LMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+K T L+ C C R+ EAV+ L+ M E G +P++ +++ C +A
Sbjct: 188 LKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRA 247
Query: 540 EALLGFFAKKFQI--YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LL AK+ D +Y+ V + F +G+ K L R G P+ +T +I
Sbjct: 248 LDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLII 307
Query: 598 HSLWKG 603
+L K
Sbjct: 308 DALCKA 313
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVG 184
T S Y +I+ L NN A+ + +L + + S+ + +I+ A KV
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTM--NVKFSITILNTMIN-------AMYKVQ 735
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
E+ + F G P+ + ++ LLK ++ ++ M + GI P + N
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLN 795
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + + G++ K +L K++ + + T + ++S + +KG+ + L Y+
Sbjct: 796 RIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLLPAKYQ 854
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 199/414 (48%), Gaps = 1/414 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ +G++ E+ + F K P SCN LL+ KL D + +++M G P
Sbjct: 36 IDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTV 95
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+NI+ CK GDV+ G E+++ G PD VTYN++I + K GRL+D +
Sbjct: 96 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEE 155
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M PD++TY L+N CK GK+ + + F M GL P++VSY+TL+ A+CKEG
Sbjct: 156 MKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGM 215
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
MQ++ +M G+ P+ +T ++ Y K G L A L E+ + GV + Y
Sbjct: 216 MQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTA 275
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DR 479
LI LC P LL+ + + ++ + L++ LCK V+ A+ + D
Sbjct: 276 LIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDF 335
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++ + + Y A+I C + A +L ++M + G++PD L++G + +V +A
Sbjct: 336 GLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEA 395
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
AL + D +Y ++ + L K + + G P+ + C
Sbjct: 396 LALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 449
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 215/432 (49%), Gaps = 40/432 (9%)
Query: 173 TEDCNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
T CN + K+G + F+ + G +P++ + N +++ + K ++ ++E
Sbjct: 60 TRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFE 119
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM G+ P+T T+N + F K G +D F E++++ +PD++TYN LI+ +CK G
Sbjct: 120 EMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 179
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+L +R M R + P++V+Y+TL++ CKEG +++A + + M GL P+ +Y
Sbjct: 180 KLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 239
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ---GYGKEGRLLSALNLVVEL 406
+LI AYCK G + ++ L EM+ G+ + T ++ G+ L L+ +VEL
Sbjct: 240 SLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVEL 299
Query: 407 ---------------------------------QRFGVSISRDIYDYLIVALCQDNRPFA 433
FG+ + IY +I LC+ N+ A
Sbjct: 300 DIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEA 359
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
AT+L E++ Q G VP Y LM+ K +V +AL L+D+MV+ +K L Y +L+
Sbjct: 360 ATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVW 419
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
+ +A S ++EM+ G+ PD +C ++ + +N+A L + K Q+
Sbjct: 420 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKH-QLL 478
Query: 554 DTESYNAVFNMF 565
+++ NA+ N++
Sbjct: 479 TSDNDNALPNIY 490
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 185/384 (48%), Gaps = 1/384 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + L + L+ L +++ Q + +M R + P T + N L H F K G D V F
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ + G P + TYN +I CK+G + A L+ M R ++PD VTY ++++G K
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ + F M PD+++YN LI +CK GK+ + EM NG+ P+ +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+V + KEG + A+ V+++R G+ + Y LI A C+ A L +
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
Q G ++ Y L++ LC ++ + L L DEMV+ +IK ++ T+ LI C
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322
Query: 503 EAVSLMDEMLES-GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A+ + G+ ++ I +I+G C V A L A+K + D +Y ++
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382
Query: 562 FNMFAEDGDLSKLMELQKRFLRLG 585
+ + G++ + + L+ + + G
Sbjct: 383 MDGNFKQGNVLEALALRDKMVETG 406
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 1/353 (0%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P F+ L V G V++ K++ P + N L+ + K G+ +
Sbjct: 23 PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ M P + TY +++ +CKEG V A LF M RGL PD V+YN++I + K
Sbjct: 83 FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ ++ EM PD T ++ + K G+L L E++R G+ +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ A C++ A + + G VP+ Y L+++ CK +++DA L +EM+
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ ++ TY ALI CG E + L+DEM+E + VLI+G C K V+
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322
Query: 538 KAEALLGFFAKKFQIYDTES-YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
KA G + F + + Y A+ + + + L ++ + G P+
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPD 375
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 154 ELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
E +KD C V + LI+C + K G + + + FR+ G +P++VS + L
Sbjct: 154 EEMKDMCCEPDVITYNALINC-------FCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++ K + Q + Y +M R+G+ PN +T+ L +CK G++ ++ + G
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+ ++VTY LI C + +L M ++ +VT+ L++GLCK V +A
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326
Query: 332 LFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
F R+ + GL + Y +I CK +++ + +L +M G+ PD ++ G
Sbjct: 327 YFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGN 386
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K+G +L AL L ++ G+ + Y L+ L N+ A S LE + +G P
Sbjct: 387 FKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 444
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 110/300 (36%), Gaps = 71/300 (23%)
Query: 304 RNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
RNV +P + L + L G V EA Q F +M + P S N L+ + K GK
Sbjct: 18 RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
K +M+G G P FT Y+ +I
Sbjct: 78 GVKRFFKDMIGAGAKPTVFT-----------------------------------YNIMI 102
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+C++ AA L E + G +P YN +++ K + D + +EM D +
Sbjct: 103 DCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE 162
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + TY ALI CFC G+ + + EM +G+ P+
Sbjct: 163 PDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN----------------------- 199
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
SY+ + + F ++G + + ++ R+G PN T +I + K
Sbjct: 200 ------------VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCK 247
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 7/360 (1%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
PH++ L++C C+ + + + K + +G +PSIV+ LLNG + +
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLG-------KMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ ++++M +G PN +N + CK+ VD L ++E++G PD+VTYN
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+LIS C GR +DA + M +R + PD+ T+ L++ KEG+V EA + + M+ R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
L PDIV+Y+ LI+ C ++ E++ + M+ G +PD T I++ GY K ++
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+ L E+ + GV + Y LI C+ + A + R+ G P++ YN L+
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC + AL++ +M + + TY +I C G +A + + G++PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 1/406 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI + LL+ + K+ D ++E+M +GI N T NIL + FC+ + F
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G +P +VT+ +L++ +C+ R+ DA Y++ M P++V Y T+++GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V A L +RM G+ PD+V+YN+LI C G+ ++ ++ M IYPD FT
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ KEGR+ A E+ R + Y LI LC +R A + +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P + Y+ L+ CK V + L EM R + + TY LI +C G+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A + M+ G+ P+ VL++G C + KA +L K D +YN +
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW-KGMERK 607
+ G+++ ++ G P+ T M+ L+ KG+ R+
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y ++ + + +L+D+ L+ M + LP + ++ L++ + K K L+ +M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ ++ + N L+ +C+ ++ + S L +M+ G P T ++ G+ + R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + ++ G + IY+ +I LC+ + A LL R+ +DG P + YN L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC +DA + M R I P + T+ ALI GR EA +EM+ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD +LI G CM +++AE + GF K D +Y+ + N + + + M+L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 578 QKRFLRLGFAPNNLTCKYMIHS 599
+ G N +T +I
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQG 370
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 197/431 (45%), Gaps = 46/431 (10%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF ++
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLPEA-KSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + FR T + + +C +L L+KL W Y+E+
Sbjct: 69 FSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+ + FNIL FCK G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ EAH+LF M+ RGL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK GK+ + + +M+ G PD T ++ G K+G L A +L E+ G+
Sbjct: 249 DGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
P Y L++ CK + A
Sbjct: 309 -----------------------------------PDKITYTTLIDGSCKEGDLETAFEY 333
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+ M+ NI+ +Y ALI C GRS +A ++ EML G+ PD+ ++++ +C
Sbjct: 334 RKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCK 393
Query: 533 EKDVNKAEALL 543
DV LL
Sbjct: 394 NGDVKMGSKLL 404
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K F + LD G P+ V+ L++G K +D ++Y++M G P+ T+N L
Sbjct: 224 EAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLI 283
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK GD+ + +++ +G PD +TY TLI CK+G L AF + M + N+
Sbjct: 284 YGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D V+YT L++GLCKEG+ +A ++ M+ GL PD +Y ++ +CK G ++ L
Sbjct: 344 LDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKL 403
Query: 368 LYEMMGNGIYP 378
L EM +G P
Sbjct: 404 LKEMQRDGHVP 414
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 134/329 (40%), Gaps = 35/329 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA +R+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ + +N L+ +CKEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 125 KEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV P + Y
Sbjct: 185 GDLDEGFRLKSAMHASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + +A L DEM+DR + P+ T+ LI C G+ A+ + +ML
Sbjct: 210 SVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G PD LI G C + D+ +A+ L + K D +Y + + ++GDL
Sbjct: 270 QGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
E +KR ++ ++++ +I L K
Sbjct: 330 AFEYRKRMIKENIRLDDVSYTALISGLCK 358
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 6/400 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +L L + ++ +M R PN T+N + FC G V + ++ E
Sbjct: 492 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 547
Query: 269 EG-FDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G P+ TY T+IS +CK GR+++A ++ ++ + V P+ V Y L+ G C +GK+
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A RMV RG++ + +YN L+ A +G+ E+ L+ EM G G+ PD FT I+
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL + + R GV + Y LI AL + + L + + G
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L +YN L+ S ++ A + EM + I P TY L+ C +GR EA
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 787
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+DEM E G+ PD LI+GY M+ DV A + K +YNA+
Sbjct: 788 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 847
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
++G + K + G P++ T +I L ER
Sbjct: 848 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 887
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 1/337 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDK 258
G P+ + +++G K+ +D+ +V++EM G + P +N L +C G +D
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ +++ E G + TYN L+ + GR +A+ L M + + PD+ TY L+N
Sbjct: 610 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 669
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CKEG V++A ++F M RG+ +V+Y LI+A K+G++QE+ L E + GI P
Sbjct: 670 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 729
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++ + G + A ++ E+++ ++ Y+ L+ LC R A L+
Sbjct: 730 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 789
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P L YN L+ V DAL +++EM+++ P+L TY ALI C
Sbjct: 790 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 849
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G+ +A +++ EM+E+G+ PD LI G E +
Sbjct: 850 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 9/321 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + E+KP + Y ++ K A+ +VE + +V +
Sbjct: 574 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNL 631
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ A G E+++ + G P + + N L+NG K + + +++
Sbjct: 632 LVH-------ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 684
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M R G+ T+ L + K G V + + ++ G PDLV YN LI+S+
Sbjct: 685 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 744
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF + M ++ + PD VTY TLM GLC G+V EA +L M RG+ PD+V+Y
Sbjct: 745 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 804
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NTLI Y +G ++++ + EMM G P T ++QG K G+ A N+V E+
Sbjct: 805 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 864
Query: 409 FGVSISRDIYDYLIVALCQDN 429
G++ Y LI L ++
Sbjct: 865 NGITPDDSTYISLIEGLTTED 885
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL ++ I P Y ++ + A+K+ E++ + P +V ++
Sbjct: 537 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV-MYN 595
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI Y G + + + ++ G ++ + N L++ L + +++
Sbjct: 596 ALIG-------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 648
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEMG G+ P+ T+NIL + CK G+V K E + G +VTY LI + K
Sbjct: 649 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 708
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
KG++ + L+ RR + PDLV Y L+N G + A ++ M + ++PD V+
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 768
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTL+ C G++ E++ L+ EM GI PD T ++ GY +G + AL + E+
Sbjct: 769 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 828
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + + Y+ LI LC++ + A ++++ + ++G P Y L+E L D A
Sbjct: 829 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 888
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T+N ++ C G+ A L R M R P+ VTY T++ G C G+V+ A +
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 544
Query: 336 MVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKE 393
M R G++P+ +Y T+I +CK G++ E+ + EM+ G + P+ ++ GY +
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+L +AL + GV+++ Y+ L+ AL D R A L+E +G G P + Y
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ CK +V AL + + M R ++ ++ TY ALI G+ E L DE +
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD + LIN + ++++A ++G KK D +YN + G + +
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+L G P+ +T +I
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLI 808
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N ++ LC A AL E++ + +P+ TY +I FC GR A+ +M EM
Sbjct: 491 FNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 546
Query: 513 E-SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGD 570
E G+ P+ +I+G+C V++A + K ++ + YNA+ + + G
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + + R + G A T ++H+L+
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALF 637
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 228/486 (46%), Gaps = 8/486 (1%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+DL P + +Y ++ L +++ A+ M+ + + C V F +I
Sbjct: 219 SDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI------- 271
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ K G + ++ + + G +P +V+ N +++ L K +D+ V +M G+
Sbjct: 272 HGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVE 331
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+ + H + +G + K+ +G P +VT+N+ +SS CK GR DA +
Sbjct: 332 PDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEI 391
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ M + +PDLV+Y+ L++G EG+ + + LFH M +G+ + +N LI A+ K
Sbjct: 392 FQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAK 451
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G M E+ + EM G G+ PD T ++ + + GRL A+ ++ G+ + +
Sbjct: 452 RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVV 511
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C A L+ + G P++ ++ ++ SLC V DA + + +
Sbjct: 512 YHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ +P++ T+ +LI +C +G+ +A ++D M+ G+ PD L++GYC +
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ L K T +Y+ V + G S ++ + G A + T K +
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691
Query: 597 IHSLWK 602
+ L +
Sbjct: 692 LKGLCR 697
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 212/429 (49%), Gaps = 18/429 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYV 181
P +Y +++H A +F+ + + + +V +C F LIS A+
Sbjct: 402 PDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANC----HCFNILIS-------AHA 450
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ F + G +P +V+ + L++ ++ + + + +M IG+ PNT
Sbjct: 451 KRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++ L H FC +GD+ K + ++ +G P++V ++++I S C +GR+ DA ++ +
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNL 570
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ P +VT+ +L++G C GK+ +A + MV G+ PD+V+YNTL+ YCK GK
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + L EM+ + P T T I++ G GR +A + E+ G ++ D Y
Sbjct: 631 IDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKI 690
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+++ A +L ++G + I N ++ +L K +A L +
Sbjct: 691 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSG 750
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P++STY +I G EA ++ M +SG P S++ +I + D+ KA
Sbjct: 751 LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA- 809
Query: 541 ALLGFFAKK 549
G++ K
Sbjct: 810 ---GYYMSK 815
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 213/491 (43%), Gaps = 45/491 (9%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D ++P Y I+H + + + + KM ++ K + F +S
Sbjct: 327 DKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTS--KGLIPGIVTFNSFMS------- 377
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G +++ + F+ G P +VS + LL+G ++ M GI
Sbjct: 378 SLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA 437
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N H FNIL K G +D+ +++ +G PD+VTY+TLIS++C+ GRL DA +
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497
Query: 299 RIMYRRNVLPDLVTYTTLMNG------------------------------------LCK 322
M + P+ V Y +L++G LC
Sbjct: 498 SQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCN 557
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG+V +AH +F+ ++H G P IV++N+LI YC GKM+++ +L M+ GI PD T
Sbjct: 558 EGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 617
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+V GY K G++ L L E+ V + Y ++ L R AA + +
Sbjct: 618 YNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMI 677
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G ++ Y L++ LC+ D +A+ L ++ + K ++ +I + R
Sbjct: 678 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRRE 737
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L + SG++P+ V+I+ E V +A+ + K + N +
Sbjct: 738 EANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDII 797
Query: 563 NMFAEDGDLSK 573
M + GD+ K
Sbjct: 798 RMLLQKGDIVK 808
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 195/422 (46%), Gaps = 6/422 (1%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY-EEMGRIGICPNTHTFNILTHVFC 251
F + L G + + N L L D+ V M +G PN ++N + C
Sbjct: 179 FARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLC 238
Query: 252 KNGDVDKVNGFLEKIEEEGF--DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
+ + ++++ +EG PD+V++NT+I + K+G ++ A L M ++ V PD
Sbjct: 239 GDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPD 298
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+VTY ++++ LCK + +A + +MV +G+ PD ++Y +I Y G +ES +
Sbjct: 299 VVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFR 358
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M G+ P T + K GR A + + G Y L+ +
Sbjct: 359 KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEG 418
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
R +L + G V + +N L+ + K + +A+L+ EM + ++P + TY
Sbjct: 419 RFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYS 478
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAK 548
LI FC +GR +A+ +M+ G+ P++ + LI+G+CM D+ KA+ L+ +K
Sbjct: 479 TLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSK 538
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI--HSLWKGMER 606
+ ++++ + +G + ++ + +G P +T +I + L ME+
Sbjct: 539 GIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEK 598
Query: 607 KF 608
F
Sbjct: 599 AF 600
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 200/446 (44%), Gaps = 42/446 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +ES K FRK G P IV+ N ++ L K ++++ M G P+ ++
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSY 407
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+IL H + G +N + ++G + +N LIS++ K+G +++A ++ M
Sbjct: 408 SILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG 467
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ V PD+VTY+TL++ C+ G++ +A + F +M+ GL P+ V Y++LI +C G + +
Sbjct: 468 QGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVK 527
Query: 364 SKSLLYEMMGNGI-YPDTFTCQIIVQGYGKEGRLLSA---LNLVVELQRFGVSISRDIYD 419
+K L+ EMM GI P+ I+ EGR++ A NLV+ + ++ ++
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT---FN 584
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C + A +L+ + G P + YN L+ CK + D L+L EM+ +
Sbjct: 585 SLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHK 644
Query: 480 NIKPS-----------------------------------LSTYRALICCFCGIGRSGEA 504
+KP+ + TY+ L+ C + EA
Sbjct: 645 KVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEA 704
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++L ++ D I +IN + +A L + + + +Y + +
Sbjct: 705 ITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHN 764
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNN 590
++G + + + + G AP++
Sbjct: 765 LLKEGSVEEADTMFSSMEKSGCAPSS 790
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 159/366 (43%), Gaps = 36/366 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM------- 231
A+ ++G + ++ + F + + +G +P+ V + L++G + + ++ EM
Sbjct: 483 AFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPR 542
Query: 232 ----------------GR-------------IGICPNTHTFNILTHVFCKNGDVDKVNGF 262
GR IG P TFN L +C G ++K G
Sbjct: 543 PNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGV 602
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +PD+VTYNTL+S YCK G+++D L+R M + V P VTY+ +++GL
Sbjct: 603 LDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFH 662
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ A ++FH M+ G + DI +Y L+ C+ E+ +L +++ D
Sbjct: 663 AGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITI 722
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K R A +L + G+ + Y +I L ++ A ++ +
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G PS + N+++ L + + A ++ I ST L+ F G+
Sbjct: 783 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHR 842
Query: 503 EAVSLM 508
E + +
Sbjct: 843 EQIKFL 848
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 159/397 (40%), Gaps = 48/397 (12%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLV-----TYNTLISSYCKKGRLNDAFYLYRIMYR 303
V C NG V +I E P + TY L+ C+ R + + + R
Sbjct: 126 VSCSNGPA-LVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLR 184
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREA-HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + T + LC + EA L HRM G P+ +SYNT+I + C + + Q
Sbjct: 185 AGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQ 244
Query: 363 ESKSLLYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E+ ++ M G PD + ++ G+ K+G + A NL+ E+ + GV Y+
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNS 304
Query: 421 LIVALCQ---------------------DNRPFAA--------------TSLLERIGQDG 445
++ ALC+ D + A + ++ G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+P + +N M SLCK DA + M + P L +Y L+ + GR +
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY--DTESYNAVFN 563
+L M + G++ + +LI+ + ++ EA+L F + Q D +Y+ + +
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMD--EAMLVFTEMQGQGVRPDVVTYSTLIS 482
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F G L+ ME + + +G PN + +IH
Sbjct: 483 AFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGF 519
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 26/457 (5%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
++ P ++ F LI C DC+ + S TF K +GFQP +V+ N LL+GL
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHK-------LSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 216 LKLNCIDQCW---------------QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ I + ++++M IG+ P TFN L + C G V +
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ K+ +G D+VTY T+++ CK G A L M ++ PD+V Y+ +++ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+G +A LF M+ +G++P++ +YN +I +C G+ +++ LL +M+ I PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ KEG+L A L E+ + Y+ +I C+ NR A + +
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ P + +N +++ C+ V + + L E+ R + + +TY LI FC +
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L EM+ G+ PD+ C +L+ G+C + + +A L DT +YN
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + + + +L G P+ T MI
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 204/427 (47%), Gaps = 9/427 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E+ F + +++G P +++ N L+NGL + + + +M G+ +
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ + + CK GD L K+EE PD+V Y+ +I CK G +DA YL+
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P++ TY +++G C G+ +A +L M+ R ++PD++++N LI A KEGK
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--Y 418
+ E++ L EM+ I+PDT T ++ G+ K R A ++ F + S D+ +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTF 435
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ R LL I + G V + YN L+ C+ D++ A L EM+
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P T L+ FC + EA+ L + + S + D+ ++I+G C V++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L D ++YN + + F +S L + G P+N T +I
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 599 SLWKGME 605
K E
Sbjct: 616 GCLKAGE 622
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 19/412 (4%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ V CN ++ +++N D +Y +M I N ++FNIL FC +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL---------------P 308
K+ + GF PD+VT+NTL+ C + R+++A L+ M L P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++T+ TL+NGLC EG+V EA L ++MV +GL D+V+Y T++ CK G + + +LL
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M I PD I+ K+G A L E+ G++ + Y+ +I C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A LL + + P + +N L+ + K + +A L DEM+ R I P TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++I FC R +A + D M PD +I+ YC K V++ LL ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +T +YN + + F E +L+ +L + + G P+ +TC +++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 164/328 (50%), Gaps = 4/328 (1%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + L+ G P++ + N +++G ++ +M I P+ TFN L K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + +++ PD VTYN++I +CK R +DA +++ +M PD+VT
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 434
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ T+++ C+ +V E QL + RGL + +YNTLI +C+ + ++ L EM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G+ PDT TC I++ G+ + +L AL L +Q + + Y+ +I +C+ ++
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A L + G P ++ YN ++ C +++DA +L +M D +P STY LI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDS 520
G +++ L+ EM +G D+
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 3/242 (1%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
F + D+ P +V+ N +++ + +D+ Q+ E+ R G+ NT T+N L H
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
FC+ +++ +++ G PD +T N L+ +C+ +L +A L+ ++ + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
V Y +++G+CK KV EA LF + G+ PD+ +YN +I +C + + ++ L +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA-LCQD 428
+M NG PD T +++G K G + ++ L+ E++ G S D + +VA L D
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG--FSGDAFTIKMVADLITD 654
Query: 429 NR 430
R
Sbjct: 655 GR 656
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 18/277 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P + Y +++ +N+F A M D S DV F +I
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIID-------V 441
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E + R+ G + + N L++G +++ ++ +++EM G+CP+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T NIL + FC+N +++ E I+ D D V YN +I CK ++++A+ L+
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ V PD+ TY +++G C + + +A+ LFH+M G PD +YNTLI K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ +S L+ EM NG D FT +++ +GRL
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRL 657
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 15/327 (4%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M R V ++ + + A L+ +M R + +I S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL-------------- 396
LI +C K+ S S ++ G PD T ++ G E R+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 397 -LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L A+ L ++ G++ ++ LI LC + R A +L+ ++ G + Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++ +CK AL L +M + +IKP + Y A+I C G +A L EMLE G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ P+ +I+G+C + A+ LL ++ D ++NA+ + ++G L +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L L P+ +T MI+ K
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCK 413
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 233/496 (46%), Gaps = 47/496 (9%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FF+ + NDL K T ++ +++++ FS+A K
Sbjct: 119 AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF-------------------- 158
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
Y+ V F K GFQP++++ N ++ L KL ID+ +
Sbjct: 159 -----------YLHV------FGANSK----GFQPNLLTYNLIIKALCKLGQIDRAVDTF 197
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
EM P+ T++ L + CK VD+ L++++ EG P+ VT+N LI + K
Sbjct: 198 REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKN 257
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G L+ A L M+ + +P+ VTY TL++GLC +GK+ +A L +MV P+ V+Y
Sbjct: 258 GDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTY 317
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
T+I K+ + ++ +L M G + + ++ G KEG+ +A+ L E+
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 377
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G + +Y I LC+D +P A +L+ + G++P+ Y+ LM+ K
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQK 437
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+L+ EM+ ++++ ++ L+ C GR EA+++ ML G+ PD +I
Sbjct: 438 AILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIK 497
Query: 529 GYCMEKDVNKAEALLGFFAKKFQ----IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
G C V+K L F+ + Q D +YN +FN +L++ ++L L
Sbjct: 498 GLCDVGSVDKGLKL--FYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE 555
Query: 585 GFAPNNLTCKYMIHSL 600
G P++LTC + +L
Sbjct: 556 GCDPDSLTCNIFLETL 571
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 158/366 (43%), Gaps = 6/366 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL--NDAFYLYR 299
TF L + + + ++ L++++ EG + LI C K L + +R
Sbjct: 67 TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIF-ILIFKACGKAHLPGEAVNFFHR 125
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV---HRGLSPDIVSYNTLIFAYC 356
+ + + ++ +++N + +EG A + + + +G P++++YN +I A C
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 185
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G++ + EM PD FT ++ G KE R+ A+ L+ E+Q G +
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 245
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
++ LI AL ++ A L++ + G VP+ YN L+ LC + AL L ++M
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V P+ TY +I R+ + V ++ M E G + I LI+G E
Sbjct: 306 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 365
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A L A+K + Y A + D + ++ + L GF PN T +
Sbjct: 366 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 425
Query: 597 IHSLWK 602
+ +K
Sbjct: 426 MKGFFK 431
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 199/417 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+F R+ + G P+ +C + L + C + W+++ +M G PN +T+
Sbjct: 469 GRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTY 528
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C +G + G ++ +G P+ VTYN LI+ + R+ AF + +M R
Sbjct: 529 TALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGR 588
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++VTY ++ G C G ++A + + M+ RG S ++V+YNT+I YC G
Sbjct: 589 NGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTS 648
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M G PD ++ ++ G+ K ++ SA L E+ G+ + Y LI
Sbjct: 649 ALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALID 708
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+D + ATSLLE + + G P+++ YN L+ L K ++ + A L M++ I P
Sbjct: 709 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFP 768
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY A+I C G + A+ + ++M+E G LP+ LI E V +AE L
Sbjct: 769 NVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 828
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ I D +Y + + G + R ++ G P T +I L
Sbjct: 829 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 205/421 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G+ + + L G QP+++ N ++N L K + + +++ + P+T
Sbjct: 362 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 421
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ D+D ++ +EG +P+ VTY+TLI+ C GR+N+AF L R M
Sbjct: 422 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+LP T T + LC G +A +LF M ++G P++ +Y LI C G +
Sbjct: 482 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 541
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L + M +G++P+T T ++ + R+ A ++ + R G+ + Y+ +
Sbjct: 542 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEM 601
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C P A ++ + Q G+ +L YN +++ C + AL + D M D
Sbjct: 602 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 661
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP +Y LIC FC I + A L +EM++ G+ P+ LI+GYC ++ ++ A +
Sbjct: 662 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 721
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
LL + + ++YN + + + + S EL K + G PN +T MI L
Sbjct: 722 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 781
Query: 602 K 602
K
Sbjct: 782 K 782
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/556 (24%), Positives = 249/556 (44%), Gaps = 26/556 (4%)
Query: 5 SPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSE---HKSLSNPLYNFLPETQNPN-- 59
S + + ++F+ L+ S +YS +I S ++ + + L E PN
Sbjct: 327 SKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLL 386
Query: 60 ---KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS-DSVSALTFFNW 115
+++ +C D+ + + + P + S +L C+ D SAL FN
Sbjct: 387 IYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTY-TSMILGHCRKHDLDSALQVFNQ 445
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
+ + +P + Y +++ L + + + A ++ E++ ++
Sbjct: 446 MAKE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI------------LHGILPTAHT 492
Query: 176 CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
C A +G ++++ F + G +P++ + L++GL + ++ M
Sbjct: 493 CTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMS 552
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
R G+ PNT T+N L ++ +N + L + G ++VTYN +I YC G
Sbjct: 553 RDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPK 612
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A + M +R +LVTY T++ G C G A ++ M G PD SY LI
Sbjct: 613 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 672
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK KM+ + L EM+ +G+ P+ T ++ GY K+ +L +A +L+ ++R G
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y+ LI L + N A L + + ++G P++ Y +++ LCK S + AL +
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++M+++ P+L TY +LI G+ EA +L E+ G++PD +I Y M
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852
Query: 533 EKDVNKAEALLGFFAK 548
V A LG K
Sbjct: 853 SGKVEHAFNFLGRMIK 868
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 183/398 (45%), Gaps = 33/398 (8%)
Query: 163 VDVFQDLISCTEDCNWAYV-------KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+D+ +D C D W+Y K+ + +F F + +D G P+ V+ L++G
Sbjct: 653 LDLMRD-GGCKPD-EWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGY 710
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K +D + E M R G PN T+N+L H K + + + EEG P++
Sbjct: 711 CKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 770
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTY +I CK G + A ++ M + LP+L+TY++L+ L +EGKV EA LF
Sbjct: 771 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAE 830
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ GL PD ++Y +I AY GK++ + + L M+ G P +T ++++G E
Sbjct: 831 LERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYL 890
Query: 396 L----LSALNLVVELQRFGV--------------------SISRDIYDYLIVALCQDNRP 431
L L+AL VV FG +S + + L+ L R
Sbjct: 891 LADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRW 950
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
F A LL + G P E YN L+ SL + +V A+ + M + + L+ Y+ L
Sbjct: 951 FEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKEL 1010
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
IC C + R EA + ML PD + VLI+G
Sbjct: 1011 ICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDG 1048
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 198/462 (42%), Gaps = 37/462 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + D + P + Y +++IL N + +A +V + +F +
Sbjct: 544 AIGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYAF--------VVLNLMGRNGLFTN 594
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+++ E Y +G +++ L G ++V+ N ++ G ++
Sbjct: 595 IVTYNEMIK-GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 653
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M G P+ ++ L FCK ++ G ++ ++G P+ VTY LI YCK
Sbjct: 654 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKD 713
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+L+ A L M R P++ TY L++GL K+ A +L M+ G+ P++V+Y
Sbjct: 714 EKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTY 773
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+I CK G + + +M+ G P+ T +++ G+EG++ A NL EL+R
Sbjct: 774 TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER 833
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ Y +I A + A + L R+ + G P+L Y L++ L +AD
Sbjct: 834 HGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 893
Query: 469 ALL--LKD---------EMVDRN-----------IKPSLS--TYRALICCFCGIGRSGEA 504
L L D + D++ + P LS AL+ GR EA
Sbjct: 894 QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEA 953
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
L+ M+ G+ PD + L+ C V + +G F
Sbjct: 954 NELLGSMISQGLCPDQEAYNSLL---CSLLRVRNVDLAMGVF 992
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%)
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M + S L + +G+ F ++ + G + ++ + GV + IY+
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ALC+D A ++++++ + P Y ++ C+ + AL + ++M
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P+ TY LI C GR EA L+ EM+ G+LP + C I C A
Sbjct: 451 CEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAW 510
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L K + +Y A+ + G L + L R R G PN +T +I+ L
Sbjct: 511 RLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINIL 570
Query: 601 WKGMERKF 608
+ K+
Sbjct: 571 VENRRIKY 578
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 422 IVALCQDNRPFAAT-SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C A T S L+ + Q G L Y+ L+ L + A + M+
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P+L Y A+I C G +A ++M ++ ES M PD+ +I G+C + D++ A
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ AK+ +T +Y+ + N + G +++ +L + + G P TC I +L
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 17/219 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI-DQCWQVYEEMGRIGIC 237
AY+ G + +F + + G QP++ + L+ GL + DQ + +
Sbjct: 849 AYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPD-----VV 903
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY--NTLISSYCKKGRLNDAF 295
PN +F T D D V+ K+ E DP L N L+S+ GR +A
Sbjct: 904 PNC-SFGYQTT------DQDAVSVMSAKLAE--LDPGLSVQVQNALVSNLSTAGRWFEAN 954
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + + PD Y +L+ L + V A +F M +G + Y LI A
Sbjct: 955 ELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICAL 1014
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
C+ + +E++ M+ PD +++ G ++G
Sbjct: 1015 CQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 28/233 (12%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF-QDLISCTEDCNWAYV 181
+PT Y +++ L N++ A + L L ++V +C QD +S
Sbjct: 872 QPTLWTYGVLIKGL--KNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS---------- 919
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICP 238
++ L V Q ++VS L+ + ++ E +G + G+CP
Sbjct: 920 ---VMSAKLAELDPGLSVQVQNALVS---------NLSTAGRWFEANELLGSMISQGLCP 967
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L + +VD G + + +G + L Y LI + C+ R +A +
Sbjct: 968 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
M R PD V L++GL ++G + H M R P Y L
Sbjct: 1028 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/418 (27%), Positives = 200/418 (47%), Gaps = 35/418 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + S N +++G K N ID QV++ M G P+ T+NI+ C G ++
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++++ ++G P ++TY LI + +GR+N+A L+ + R + PDL TY ++ G+CK
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG A + RG +PD+VSYN L+ ++ + + ++ + L+ +M+ +G P+ T
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ + +EGR+ A+N++ ++ G++ YD LI A C++ R A LE++
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368
Query: 443 QDGYVPSLEIYNELMESLCK-----------------------------------CDSVA 467
DG +P + YN ++ +LCK C +
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
AL + EM+ + I P TY +LI C C G EA+ L+ +M + P +++
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVL 488
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
G C V + LL +K + + SY + A G ++ MEL RLG
Sbjct: 489 LGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLG 546
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 170/363 (46%), Gaps = 2/363 (0%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H +L C+ G ++ FLE + +GF PD+V LI + L A +
Sbjct: 62 DAHLMKLLNRS-CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM 120
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
I+ PD+ +Y +++G K ++ A+Q+F RM RG SPD+V+YN +I + C
Sbjct: 121 EILETYGD-PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSR 179
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK++ + ++ E++ +G P T I+++ EGR+ AL L EL G+ Y
Sbjct: 180 GKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTY 239
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I +C++ A + + G P + YN L+ S D L +MV
Sbjct: 240 NAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL 299
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+P++ T+ LI FC GR EAV++++ M E G+ PDS LI+ +C E ++
Sbjct: 300 SGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDL 359
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L + D +YN + + G +++ ++ +G P M
Sbjct: 360 AIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFS 419
Query: 599 SLW 601
+LW
Sbjct: 420 ALW 422
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 182/394 (46%), Gaps = 9/394 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +++ L K A +++ EL L C SV + LI T +
Sbjct: 164 PDVVTYNIMIGSLCSRGKLELAFEVMDEL--LKDGCKPSVITYTILIEAT-------ILE 214
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ + F + + G +P + + N ++ G+ K D+ + G P+ ++
Sbjct: 215 GRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSY 274
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL F + ++ + G +P++VT++ LISS+C++GR+ +A + +M
Sbjct: 275 NILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKE 334
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + PD +Y L++ CKEG++ A + +MV G PDIV+YNT++ CK G
Sbjct: 335 KGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADL 394
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + ++ G P + G + AL ++ E+ R G+ Y+ LI
Sbjct: 395 ALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLIS 454
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+D A LL + + P++ +N ++ +CK V + + L MV++ P
Sbjct: 455 CLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLP 514
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ ++Y LI G EA+ L + + G++
Sbjct: 515 NETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 1/322 (0%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L++ C+ G+ N++ Y + + PD+V T L+ G +++A ++ + G
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+ SYN +I + K ++ + + M G PD T I++ G+L A
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ EL + G S Y LI A + R A L + + G P L YN ++ +
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK AL + R P + +Y L+ F R + LM +M+ SG P+
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+LI+ +C E V +A +L +K D+ SY+ + + F ++G L +E ++
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
+ G P+ + ++ +L K
Sbjct: 367 MVSDGCLPDIVNYNTILATLCK 388
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 6/400 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +L L + ++ +M R PN T+N + FC G V + ++ E
Sbjct: 487 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 542
Query: 269 EG-FDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G P+ TY T+IS +CK GR+++A ++ ++ + V P+ V Y L+ G C +GK+
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A RMV RG++ + +YN L+ A +G+ E+ L+ EM G G+ PD FT I+
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 662
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL + + R GV + Y LI AL + + L + + G
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L +YN L+ S ++ A + EM + I P TY L+ C +GR EA
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 782
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+DEM E G+ PD LI+GY M+ DV A + K +YNA+
Sbjct: 783 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 842
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
++G + K + G P++ T +I L ER
Sbjct: 843 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 882
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 1/337 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDK 258
G P+ + +++G K+ +D+ +V++EM G + P +N L +C G +D
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ +++ E G + TYN L+ + GR +A+ L M + + PD+ TY L+N
Sbjct: 605 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 664
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CKEG V++A ++F M RG+ +V+Y LI+A K+G++QE+ L E + GI P
Sbjct: 665 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 724
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++ + G + A ++ E+++ ++ Y+ L+ LC R A L+
Sbjct: 725 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 784
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P L YN L+ V DAL +++EM+++ P+L TY ALI C
Sbjct: 785 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 844
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G+ +A +++ EM+E+G+ PD LI G E +
Sbjct: 845 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 9/321 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + E+KP + Y ++ K A+ +VE + +V +
Sbjct: 569 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNL 626
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ A G E+++ + G P + + N L+NG K + + +++
Sbjct: 627 LVH-------ALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 679
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M R G+ T+ L + K G V + + ++ G PDLV YN LI+S+
Sbjct: 680 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 739
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF + M ++ + PD VTY TLM GLC G+V EA +L M RG+ PD+V+Y
Sbjct: 740 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 799
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NTLI Y +G ++++ + EMM G P T ++QG K G+ A N+V E+
Sbjct: 800 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 859
Query: 409 FGVSISRDIYDYLIVALCQDN 429
G++ Y LI L ++
Sbjct: 860 NGITPDDSTYISLIEGLTTED 880
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL ++ I P Y ++ + A+K+ E++ + P +V ++
Sbjct: 532 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV-MYN 590
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI Y G + + + ++ G ++ + N L++ L + +++
Sbjct: 591 ALIG-------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 643
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEMG G+ P+ T+NIL + CK G+V K E + G +VTY LI + K
Sbjct: 644 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 703
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
KG++ + L+ RR + PDLV Y L+N G + A ++ M + ++PD V+
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 763
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTL+ C G++ E++ L+ EM GI PD T ++ GY +G + AL + E+
Sbjct: 764 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 823
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + + Y+ LI LC++ + A ++++ + ++G P Y L+E L D A
Sbjct: 824 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 883
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T+N ++ C G+ A L R M R P+ VTY T++ G C G+V+ A +
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 539
Query: 336 MVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKE 393
M R G++P+ +Y T+I +CK G++ E+ + EM+ G + P+ ++ GY +
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+L +AL + GV+++ Y+ L+ AL D R A L+E +G G P + Y
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ CK +V AL + + M R ++ ++ TY ALI G+ E L DE +
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD + LIN + ++++A ++G KK D +YN + G + +
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+L G P+ +T +I
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLI 803
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N ++ LC A AL E++ + +P+ TY +I FC GR A+ +M EM
Sbjct: 486 FNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 541
Query: 513 E-SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGD 570
E G+ P+ +I+G+C V++A + K ++ + YNA+ + + G
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + + R + G A T ++H+L+
Sbjct: 602 LDTALLYRDRMVERGVAMTVATYNLLVHALF 632
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 201/406 (49%), Gaps = 5/406 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP++V+ +++G K N + Q +E+M R + PN T+N++ + CK K
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 262 FLEKIEE-EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNG 319
L+++ + + PDLVTY+T+I+ +CK+G ++ A + R M R+ + PD+VTYT++++G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-P 378
LC++GK+ A ++ M +G+ PD +++ LI +C K+ E+ L E++ + + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ G+ K G L A+ ++ ++ + Y L+ LC+ A L
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
R+ G VP++ Y L+ LC V A LL DEM P +Y AL+ +C +
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI-YDTES 557
GR EA L EM LPD L+ G+C + +A LL I D +
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
Y+ V ++ + E + + APN +T +I L K
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 408
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 226/489 (46%), Gaps = 14/489 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y ++V+ L ++ + E++K+ V DL++ + N +
Sbjct: 37 VAPNERTYNVVVNGLC-------KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVIN-GFC 88
Query: 182 KVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + + + R+ + G P +V+ +++GL + +D+ ++ EM G+ P+
Sbjct: 89 KQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDK 148
Query: 241 HTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TF+ L +C VD+ + + E + + PD+VTY LI +CK G L A +
Sbjct: 149 FTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG 208
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M R +P++VTY++L++GLCK G + +A LF RM +G P++V+Y TLI C
Sbjct: 209 VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAH 268
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ ++ L+ EM PDT + ++ GY + GR+ A L E+ R Y
Sbjct: 269 KVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYT 328
Query: 420 YLIVALCQDNRPFAATSLLERI-GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ C +R A LLE + G P + Y+ ++ + +A EM+
Sbjct: 329 CLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIA 388
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN+ P+ TY +LI C GR A+ ++ M+ + P +I C D+++
Sbjct: 389 RNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDE 448
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS---KLMELQKRFLRLGFAPNNLTCKY 595
A LL A +Y + F+ G + +L E+ ++ + + NL +
Sbjct: 449 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ 508
Query: 596 MIHSLWKGM 604
+L +G+
Sbjct: 509 AFSALIRGL 517
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 188/444 (42%), Gaps = 73/444 (16%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL + + KP Y ++ + AMKML V + C +V +
Sbjct: 167 ALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLG--VMEGRKCVPNVVTYSS 224
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ K G + ++ FR+ G P++V+ L++GL + +D +
Sbjct: 225 LLH-------GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 277
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+EM P+T ++N L +C+ G +++ +++ + PD +TY L+ +C
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337
Query: 289 GRLNDAFYL----------------YRI--------------------MYRRNVLPDLVT 312
RL +A +L Y I M RNV P+ VT
Sbjct: 338 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y++L++GLCK G+V A ++ MV++ + P + ++N++I A C+ G M E+ LL M
Sbjct: 398 YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 457
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G+ P T +++G+ + GR+ A L E+ R S +
Sbjct: 458 AHGLEPGMVTYTTLLEGFSRTGRMEIAYEL-FEVMRKKAKKSSSAAN------------- 503
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
VP + ++ L+ LCK + A+ + +E+ R +P+ A++
Sbjct: 504 -------------LVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIV 549
Query: 493 CCFCGIGRSGEAVSLMDEMLESGM 516
GR+ EA L++ + + G+
Sbjct: 550 DGLLRAGRTEEAGKLINSISKVGL 573
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 209/420 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G QP +V+ N ++NG+ + + +M + + T+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + C++G +D +++E +G +VTYN+L+ CK G+ ND L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++P+++T+ L++ KEGK++EA++L+ M+ RG+SP+I++YNTL+ YC + ++ E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++L M+ N PD T +++GY R+ + + + + G+ + Y L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + G +P + Y L++ LC + AL + +++ +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C G+ +A +L + G+ P+ V+I+G C + +++A LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +YN + DGDL+ +L + GF+ + + K +I L G
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 182/379 (48%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P+ F+ + + V F +++E G ++ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C+ + A+ + + + PD T+ TL+ GL EGKV EA L RMV G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V+YN+++ C+ G + LL +M + D FT I+ ++G + +A++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E++ G+ S Y+ L+ LC+ + LL+ + VP++ +N L++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + +A L EM+ R I P++ TY L+ +C R EA +++D M+ + PD
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI GYCM K V+ + +K+ + + +Y+ + F + G + EL +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ G P+ +T ++ L
Sbjct: 430 VSHGVLPDVMTYGILLDGL 448
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 189/397 (47%), Gaps = 16/397 (4%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTL-LQNDLKPLLPHLGAHEISRVLLRCQSDSV--SA 109
P+ N IV+ IC S GD+ L L L ++ S ++ D +A
Sbjct: 191 PDVVTYNSIVNGICRS---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
++ F ++ IK + Y +V L K++ +L ++V ++ +V F L
Sbjct: 248 ISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVL 304
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+ +VK G ++E+ + +++ + G P+I++ N L++G N + + + +
Sbjct: 305 LD-------VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
M R P+ TF L +C VD I + G + VTY+ L+ +C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
++ A L++ M VLPD++TY L++GLC GK+ +A ++F + + IV Y
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T+I CK GK++++ +L + G+ P+ T +++ G K+G L A L+ +++
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
G + + Y+ LI A +D A+ L+E + G+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++ N+ S A ML +V C + F LI Y
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIK-------GYC 379
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
V + + K FR G + V+ + L+ G + I ++++EM G+ P+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C NG ++K E +++ D +V Y T+I CK G++ DA+ L+ +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++TYT +++GLCK+G + EA+ L +M G +P+ +YNTLI A+ ++G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIV 387
S L+ EM G D + ++++
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVI 585
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICP 238
Y G + + +TF + G QPS+ S N LLN L++ D +++ + GI P
Sbjct: 180 YGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVP 239
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T NIL CK D+D LE++ GF P++VTY T++ Y KG + A ++
Sbjct: 240 NVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVF 299
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ R +PD TYT LM+G CK+G+ +A ++ M + P+ V+Y +I AYCKE
Sbjct: 300 GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKE 359
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K E +LL +M+ P + C ++ +EG++ A L +L + + I
Sbjct: 360 KKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAIT 419
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ + + A L + + G +PS YN L+ +C+ + +A L D MV+
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ P+ TY LI FC +G + E + +M+EML++G LP+
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 161/329 (48%), Gaps = 2/329 (0%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR-NVLPDLVTYTTLMNGLCKE 323
+I G P + ++NTL+++ + R + +++ ++ ++P++ T L+ LCK+
Sbjct: 195 RIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKK 254
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+ A ++ M G P++V+Y T++ Y +G M ++ + E++ G PD T
Sbjct: 255 NDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTY 314
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I++ GY K+GR + A+ ++ E++ V + Y +I A C++ + +LL+ + +
Sbjct: 315 TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLE 374
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
Y+PS + +++ LC+ V A L +++ +N P + LI C G+ E
Sbjct: 375 KKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L DE E G +P + LI G C ++ +A L +K + + +YN +
Sbjct: 435 ARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIK 493
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
F + G+ + + + + L G PN T
Sbjct: 494 GFCKVGNAREGIRVMEEMLDNGCLPNKAT 522
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 177/416 (42%), Gaps = 4/416 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI--GICPNTHTFNILT 247
K++ T + P +S +++ + + +D Q+++ G+ N T+ +
Sbjct: 83 LKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMI 142
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
K + + + ++ + + T+I +Y GR A + + +
Sbjct: 143 EKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQ 202
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKS 366
P + ++ TL+N L + + H +F + G+ P++ + N L+ A CK+ + +
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+L EM G P+ T I+ GY +G ++ A + E+ G Y L+ C
Sbjct: 263 VLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYC 322
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A +++ + ++ P+ Y ++E+ CK + L L D+M+++ PS +
Sbjct: 323 KKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSA 382
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+I C G+ A L ++L+ PD+ I LI+ C E V +A L F
Sbjct: 383 LCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF 442
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K I T +YNA+ E G+L + L + G PN T +I K
Sbjct: 443 -EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCK 497
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 151/333 (45%), Gaps = 46/333 (13%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV-KDCPHSVDVFQDLISCTEDCNWAY 180
++P+ ++ +++ L N +F +LV L+ K+C + ++ +C A
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRF--------DLVHLMFKNCRKKFGIVPNVFTCNILVK-AL 251
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K I + + + +GF P++V+ +L G + + +V+ E+ G P+
Sbjct: 252 CKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDP 311
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK------------ 288
T+ IL +CK G ++++EE +P+ VTY +I +YCK+
Sbjct: 312 TTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD 371
Query: 289 -----------------------GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
G++ A L++ + ++N PD +TL++ LCKEGK
Sbjct: 372 MLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGK 431
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V EA +LF +G P ++YN LI C+ G++ E+ L M+ G P+ FT +
Sbjct: 432 VWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNM 490
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++G+ K G + ++ E+ G ++ Y
Sbjct: 491 LIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + ++K L P + L++ L K + + ++++E + G P+T T+
Sbjct: 395 GKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEK-GSIPSTLTY 453
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L C+ G++ + + + E+G P+ TYN LI +CK G + + M
Sbjct: 454 NALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLD 513
Query: 304 RNVLPDLVTYT 314
LP+ TY
Sbjct: 514 NGCLPNKATYA 524
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 213/457 (46%), Gaps = 26/457 (5%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
++ P ++ F LI C DC+ K+ S TF K +GFQP +V+ N LL+GL
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCH----KLSF---SLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 216 LKLNCIDQCW---------------QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ I + ++++M IG+ P TFN L + C G V +
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ K+ +G D+VTY T+++ CK G A L M ++ PD+V Y+ +++ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+G +A LF M+ +G++P++ +YN +I +C G+ +++ LL +M+ I PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ KEG+L A L E+ + Y+ +I C+ NR A + +
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ P + +N +++ C+ V + + L E+ R + + +TY LI FC +
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L EM+ G+ PD+ C +L+ G+C + + +A L DT +YN
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + + + +L G P+ T MI
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 204/427 (47%), Gaps = 9/427 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E+ F + +++G P +++ N L+NGL + + + +M G+ +
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ + + CK GD L K+EE PD+V Y+ +I CK G +DA YL+
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P++ TY +++G C G+ +A +L M+ R ++PD++++N LI A KEGK
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--Y 418
+ E++ L EM+ I+PDT T ++ G+ K R A ++ F + S D+ +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTF 435
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ R LL I + G V + YN L+ C+ D++ A L EM+
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P T L+ FC + EA+ L + + S + D+ ++I+G C V++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L D ++YN + + F +S L + G P+N T +I
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 599 SLWKGME 605
K E
Sbjct: 616 GCLKAGE 622
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 19/412 (4%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ V CN ++ +++N D +Y +M I N ++FNIL FC +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL---------------P 308
K+ + GF PD+VT+NTL+ C + R+++A L+ M L P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++T+ TL+NGLC EG+V EA L ++MV +GL D+V+Y T++ CK G + + +LL
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M I PD I+ K+G A L E+ G++ + Y+ +I C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A LL + + P + +N L+ + K + +A L DEM+ R I P TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++I FC R +A + D M PD +I+ YC K V++ LL ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +T +YN + + F E +L+ +L + + G P+ +TC +++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 168/341 (49%), Gaps = 12/341 (3%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + L+ G P++ + N +++G ++ +M I P+ TFN L K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + +++ PD VTYN++I +CK R +DA +++ +M PD+VT
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 434
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ T+++ C+ +V E QL + RGL + +YNTLI +C+ + ++ L EM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G+ PDT TC I++ G+ + +L AL L +Q + + Y+ +I +C+ ++
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A L + G P ++ YN ++ C +++DA +L +M D +P STY LI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDS--------QICRV 525
G +++ L+ EM +G D+ ICRV
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRV 655
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 117/223 (52%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
F + D+ P +V+ N +++ + +D+ Q+ E+ R G+ NT T+N L H
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
FC+ +++ +++ G PD +T N L+ +C+ +L +A L+ ++ + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
V Y +++G+CK KV EA LF + G+ PD+ +YN +I +C + + ++ L +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+M NG PD T +++G K G + ++ L+ E++ G S
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 131/266 (49%), Gaps = 17/266 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P + Y +++ +N+F A M D S DV F +I
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIID-------V 441
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E + R+ G + + N L++G +++ ++ +++EM G+CP+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T NIL + FC+N +++ E I+ D D V YN +I CK ++++A+ L+
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ V PD+ TY +++G C + + +A+ LFH+M G PD +YNTLI K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQI 385
++ +S L+ EM NG D FT ++
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKM 647
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 15/327 (4%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M R V ++ + + A L+ +M R + +I S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL-------------- 396
LI +C K+ S S ++ G PD T ++ G E R+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 397 -LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L A+ L ++ G++ ++ LI LC + R A +L+ ++ G + Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++ +CK AL L +M + +IKP + Y A+I C G +A L EMLE G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ P+ +I+G+C + A+ LL ++ D ++NA+ + ++G L +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L L P+ +T MI+ K
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCK 413
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 223/456 (48%), Gaps = 18/456 (3%)
Query: 105 DSVSALTFFNWVKN------DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
D AL F ++ + D + P S++Y L+V + S + L +++E
Sbjct: 201 DVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIER--- 257
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
++VD +CT + + + G + +F F+K + +G P++++ + L+NGL K+
Sbjct: 258 -GYAVDN----ATCTLMIS-TFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKI 311
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVT 277
I Q +++ EEM R G PN +T L CK G +K FL+ + + + P++ T
Sbjct: 312 GSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYT 371
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y +I+ YCK+ +LN A L M + ++P+ TYT L++G CK G A++L M
Sbjct: 372 YTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMG 431
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G +P+I +YN +I CK+G+ E+ LL + +G++ D T I++ + ++
Sbjct: 432 KEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNK 491
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + + + G+ Y+ LI C+ + + L E G +P+ E Y ++
Sbjct: 492 QALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMI 551
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
C+ ++ A+ +M D KP TY ALI C + EA L + M+++G+
Sbjct: 552 CGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLS 611
Query: 518 PDSQICRV-LINGYCMEKDVNKAEALLGFFAKKFQI 552
P ++ RV L YC + D A +L KK I
Sbjct: 612 P-CEVTRVTLAYEYCKQGDSATAMIILERLEKKLWI 646
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 248/501 (49%), Gaps = 29/501 (5%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKM--LCELVELVKDCP 160
++ SV +L+FFNWV +KF M++ +C L D
Sbjct: 115 EAGSVVSLSFFNWVIG--------------------FSKFRHFMRLYIVCATTFLNND-- 152
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
++D +++ C ++ ++G ++E+ + + G NF+++ L L
Sbjct: 153 -NLDRATEVMQCMVR---SFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D +V++EM + P++ ++ ++ +C+ G + V+ +L+ + E G+ D T
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+IS++ +KG +N AF+ ++ + + P+L+ +++L+NGLCK G +++A ++ MV +G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSA 399
P++ ++ LI CK+G +++ L +++ + Y P+ +T ++ GY KE +L A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L++ ++ G+ + + Y LI C+ A L++ +G++G+ P++ YN +++
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDG 448
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LCK +A L + + TY LI FC + +A+++ M + G+ PD
Sbjct: 449 LCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPD 508
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
VLI +C +K V ++E L + E+Y ++ + DG +S ++
Sbjct: 509 MHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFH 568
Query: 580 RFLRLGFAPNNLTCKYMIHSL 600
+ G P+++T +I L
Sbjct: 569 KMRDYGCKPDSITYGALISGL 589
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 193/409 (47%), Gaps = 15/409 (3%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F WV+ + + P N+ +++ L A +ML E+V K +V LI
Sbjct: 286 FKKWVQ--MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVR--KGWKPNVYTHTALID 341
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
K G ++F+ F K + ++P++ + ++NG K +++ +
Sbjct: 342 -------GLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIR 394
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M G+ PNT+T+ L CK G+ + ++ + +EGF P++ TYN +I CKKGR
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR 454
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A+ L R + + D VTYT L++ C++ ++A +F RM GL PD+ +YN
Sbjct: 455 FPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI +C++ K++ES+ L E +G G+ P T ++ GY ++G + SA+ +++ +G
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
Y LI LC +++ A L E + +G P L CK A A+
Sbjct: 575 CKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAM 634
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
++ + + K + T LI C + G A ++L+ + D
Sbjct: 635 IILERLEK---KLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVD 680
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 153/328 (46%), Gaps = 1/328 (0%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ S+ + G+L +A + M ++ +++ G V A ++F M+ R
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ PD SY ++ YC+ G++ + L +M+ G D TC +++ + ++G + A
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+ + G++ + + LI LC+ A +LE + + G+ P++ + L++ L
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343
Query: 461 CKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK A L ++V N KP++ TY +I +C + A L+ M E G++P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ LI+G+C + +A L+ K+ + +YNA+ + + G + +L +
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463
Query: 580 RFLRLGFAPNNLTCKYMIHSLWKGMERK 607
R L+ G + +T +I + + K
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNK 491
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 92/222 (41%), Gaps = 33/222 (14%)
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+++ F + VG QP + + N L+ + +++ +++EE +G+ P T+ +
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+C++G + F K+ + G PD +TY LIS C + +L++A LY M +
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610
Query: 307 LPDLVT--------------------------------YTTLMNGLCKEGKVREAHQLFH 334
P VT TL+ LC E KV A FH
Sbjct: 611 SPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFH 670
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+++ + L+ D ++ A C E S L E + GI
Sbjct: 671 KLLDKDLNVDRITLAAFTTA-CYESNKFALVSDLSERISKGI 711
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 200/400 (50%), Gaps = 1/400 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N ++ G + + + +V++ M + G+ P+TH+++IL CK GDV L ++
Sbjct: 285 NAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMAR 344
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P LV+Y++L+ C+ G++ AF L+R + + D + Y+ ++NG C+ +
Sbjct: 345 NGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEV 404
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
L++ MVH PD +Y +LI+A+C+ + ++ + M+ +G+ P+ TC I+V
Sbjct: 405 VCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVD 464
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+GKE + A + ++++FG+ + +Y +I LC+ N+ + + + GYVP
Sbjct: 465 GFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVP 524
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+Y+ +++S K + +A L +M+D KP++ TY +LI C R E V+L
Sbjct: 525 DTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLF 584
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
M+ G+ PD + LI YC ++ A + K D Y + F++
Sbjct: 585 KHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKV 644
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK-GMERK 607
+ L + G P+ +T +I +K G ERK
Sbjct: 645 LAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERK 684
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 203/426 (47%), Gaps = 10/426 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+V++ + ++ T+ + VG + + CNFLL L++ N I ++++M G PN
Sbjct: 151 FVELSMFEDALLTYTEAKKVGVELQL--CNFLLKCLVERNQIIYARSLFDDMKSSGPSPN 208
Query: 240 THTFNILTHVFCKNGDVDKVNGF--LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+++++L + + F L ++E +G P+ TY T + + ++ A+
Sbjct: 209 VYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNF 268
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+++ +R + + ++ G C+EG+V+EA ++F M GL PD SY+ L+ CK
Sbjct: 269 LQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCK 328
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+G + LL EM NGI P + ++ G + G++ A L L+ G +
Sbjct: 329 QGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIV 388
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y ++ CQ L + +VP Y L+ + C+ ++ DAL + + M+
Sbjct: 389 YSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELML 448
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
D + P++ T L+ F EA + ++ + G++P+ + RV+ING C VN
Sbjct: 449 DSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLC---KVN 505
Query: 538 KAEALLGFFA---KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
K++ + G FA K+ + DT Y+ + + F + L + L + L G PN T
Sbjct: 506 KSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYT 565
Query: 595 YMIHSL 600
+I+ L
Sbjct: 566 SLINGL 571
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 173/345 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + +F+ FR+ + GF+ + + +LNG + I+ ++ +M P+ +
Sbjct: 363 RAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAY 422
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + FC++ ++ G E + + G P++VT L+ + K+ +++AF +
Sbjct: 423 NYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKV 482
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++P+L Y ++NGLCK K +F M+ RG PD V Y+ +I ++ K K+
Sbjct: 483 RQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKL 542
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L ++M+ G P+ FT ++ G + RL + L + G++ R +Y L
Sbjct: 543 PEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSL 602
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
IV C+ + AA + +G+ G +Y L+ K ++ A L +EM ++ +
Sbjct: 603 IVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGL 662
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
PS+ TY LI + IG +A + ML++G+ PD+++ +L
Sbjct: 663 TPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL 707
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 48/307 (15%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + NY +++ + + A+ + EL+ D S +V ++CT + + K
Sbjct: 419 PDAYNYTSLIYAFCRHRNLTDALGVF----ELMLDSGVSPNV----VTCTILVD-GFGKE 469
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+I E+F K G P++ ++NGL K+N D W ++ +M + G P+T +
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529
Query: 244 NILTHVF-----------------------------------CKNGDVDKVNGFLEKIEE 268
+I+ F C + + +V + +
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
EG PD + Y +LI YCK+ + A ++R M + + D YT L+ G K +
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDG 649
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT-FTCQIIV 387
A L M ++GL+P +V+Y LI Y K G +++ M+ GI PD +C +
Sbjct: 650 AQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSC---I 706
Query: 388 QGYGKEG 394
G+G +
Sbjct: 707 LGFGNDA 713
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 201/418 (48%), Gaps = 7/418 (1%)
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+C C+ A++ + +F F L GF P+ ++ N L+ GL I + +
Sbjct: 98 LINCF--CHQAHITL-----AFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFH 150
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+++ G + ++ L + CK G+ V L K+E PD+V YNT+I+S CK
Sbjct: 151 DQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKN 210
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
L DA +Y M + + PD+VTYTTL++G C G ++EA L + M + ++P++ ++
Sbjct: 211 KLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTF 270
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI A KEGKM+E+K LL MM I PD FT ++ GY + A + + +
Sbjct: 271 NILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GV+ Y +I LC+ A SL E + +P + YN L++ LCK +
Sbjct: 331 RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 390
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+ L M ++ I+P + +Y L+ C GR +A + +L G + VLIN
Sbjct: 391 AIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLIN 450
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
C ++A L K + D +++ + E + K ++ + + G
Sbjct: 451 RLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 197/416 (47%), Gaps = 3/416 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
FK F G P + + + L+N I + V+ + + G PN T N L
Sbjct: 80 FKQFEPN---GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKG 136
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C G++ K F +++ +GF D V+Y TLI+ CK G L R + +V PD
Sbjct: 137 LCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPD 196
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+V Y T++N LCK + +A ++ M+ +G+SPD+V+Y TLI +C G ++E+ SLL
Sbjct: 197 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM I P+ T I++ KEG++ A L+ + + + Y+ LI +
Sbjct: 257 EMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVD 316
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A + + Q G P ++ Y ++ LCK V +A+ L +EM +N+ P + TY
Sbjct: 317 EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYN 376
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+LI C A++L M E G+ PD +L++G C + A+ + K
Sbjct: 377 SLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK 436
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ +Y + N + G + ++L+ + G P+ +T +I +L++ E
Sbjct: 437 GYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 183/401 (45%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P N +L+ L+ ++++ GI P+ T +IL + FC +
Sbjct: 55 PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
I + GF P+ +T NTLI C +G + A Y + + + D V+Y TL+NGLCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ + +L ++ + PD+V YNT+I + CK + ++ + EM+ GI PD T
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ G L A +L+ E++ ++ + ++ LI AL ++ + A LL +
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P + YN L++ D V A + M R + P + Y +I C
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA+SL +EM M+PD LI+G C + +A AL ++ D SY +
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + G L E+ +R L G+ N +I+ L K
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKA 455
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 165/340 (48%), Gaps = 4/340 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + RK +P +V N ++N L K + VY EM GI P+
Sbjct: 174 KTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 233
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L H FC G + + L +++ + +P++ T+N LI + K+G++ +A L +M
Sbjct: 234 TYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVM 293
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + PD+ TY +L++G +V+ A +F+ M RG++PD+ Y +I CK +
Sbjct: 294 MKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMV 353
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ SL EM + PD T ++ G K L A+ L ++ G I D+Y Y
Sbjct: 354 DEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG--IQPDVYSYT 411
Query: 422 IV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I+ LC+ R A + +R+ GY ++ Y L+ LCK +AL LK +M D+
Sbjct: 412 ILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDK 471
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
P T+ +I + +A ++ EM+ G+L +
Sbjct: 472 GCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLLKE 511
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 130/263 (49%), Gaps = 14/263 (5%)
Query: 118 NDLEIKPTSSNYC---LIVHILAWNNKFSFAMKMLCELVELVKDC-PHSVDVFQDLISCT 173
N++++K + N C +++ L+ K A K+L L ++K C V + LI
Sbjct: 256 NEMKLKNINPNVCTFNILIDALSKEGKMKEA-KIL--LAVMMKACIKPDVFTYNSLID-- 310
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
Y V ++ + F G P + ++NGL K +D+ ++EEM
Sbjct: 311 -----GYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ P+ T+N L CKN +++ ++++E+G PD+ +Y L+ CK GRL D
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A +++ + + ++ YT L+N LCK G EA L +M +G PD V+++ +I
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIR 485
Query: 354 AYCKEGKMQESKSLLYEMMGNGI 376
A ++ + +++ +L EM+ G+
Sbjct: 486 ALFEKDENDKAEKILREMIARGL 508
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/425 (27%), Positives = 203/425 (47%), Gaps = 3/425 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E K + + G P +++C L+ G + + ++ E + G P+
Sbjct: 118 VRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDV 177
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L +CK+G++DK L+ +E PD+VTYNT++ S C G+L +A +
Sbjct: 178 ITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR 234
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+R PD++TYT L+ C + V +A +L M +G PD+V+YN LI CKEG+
Sbjct: 235 QMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGR 294
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L M G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 295 LDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNI 354
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ + G +P+ YN L+ C+ + A+ + MV R
Sbjct: 355 LINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY L+ C G++ AV +++++ G P +I+G A
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAA 474
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL +K D +Y+ + +G + + +++ L P+ +T ++ L
Sbjct: 475 ELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Query: 601 WKGME 605
K +
Sbjct: 535 CKAQQ 539
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 3/394 (0%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L L++ +++ + E M G P+ L FC++G K +E +
Sbjct: 109 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEIL 168
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E G PD++TYN LI YCK G ++ A +++ R +V PD+VTY T++ LC GK+
Sbjct: 169 ENSGAVPDVITYNVLIGGYCKSGEIDKAL---QVLERMSVAPDVVTYNTILRSLCDSGKL 225
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+EA ++ R + R PD+++Y LI A C + + ++ LL EM G PD T ++
Sbjct: 226 KEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVL 285
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G KEGRL A+ + + +G + ++ ++ ++C R A LL + + G
Sbjct: 286 INGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGC 345
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
PS+ +N L+ LC+ + A+ + ++M P+ +Y L+ FC + A+
Sbjct: 346 SPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIE 405
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ M+ G PD L+ C + + A +L + K +YN V +
Sbjct: 406 YLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT 465
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G EL + R G P+ +T ++ L
Sbjct: 466 KVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGL 499
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 182/359 (50%), Gaps = 3/359 (0%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI +NG++++ FLE++ +G PD++ +LI +C+ G+ A + I+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+PD++TY L+ G CK G++ +A Q+ RM ++PD+V+YNT++ + C GK++E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M YPD T I+++ + + A+ L+ E+++ G Y+ LI
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+C++ R A L + G P++ +N ++ S+C DA L +M+ + P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
S+ T+ LI C G A+ ++++M + G +P+S L++G+C EK +++A L
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +YN + +DG +E+ + G +P +T +I L K
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 170/346 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + + + P +++ L+ + + Q ++ +EM + G P+ T+
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L + CK G +D+ FL + G P+++T+N ++ S C GR DA L M R
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P +VT+ L+N LC++ + A + +M G P+ +SYN L+ +C+E KM
Sbjct: 343 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDR 402
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ G YPD T ++ K+G+ +A+ ++ +L G S Y+ +I
Sbjct: 403 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVID 462
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
L + + A LLE + + G P + Y+ L+ L V +A+ + +M +IKP
Sbjct: 463 GLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKP 522
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
S TY A++ C ++ A+ + M+E G P +LI G
Sbjct: 523 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 195/417 (46%), Gaps = 39/417 (9%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D+I+CT + + G R++ + + G P +++ N L+ G K ID+ QV
Sbjct: 141 DVIACTSLIR-GFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
E R+ + P+ T+N + C +G + + L++ + PD++TY LI + C
Sbjct: 200 LE---RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCN 256
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ A L M ++ PD+VTY L+NG+CKEG++ EA + + M G P++++
Sbjct: 257 DSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVIT 316
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N ++ + C G+ +++ LL +M+ G P T I++ ++ L A++++ ++
Sbjct: 317 HNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP 376
Query: 408 RFG-----------------------------VSISR----DI--YDYLIVALCQDNRPF 432
+ G + +SR DI Y+ L+ ALC+D +
Sbjct: 377 KHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKAD 436
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
AA +L ++ G P L YN +++ L K A L +EM + +KP + TY L+
Sbjct: 437 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
G+ EA+ + +M + P + ++ G C + ++A L + +K
Sbjct: 497 RGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 173/373 (46%), Gaps = 9/373 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+ + P Y I+ L + K AM++L ++ ++C V + LI T CN +
Sbjct: 203 MSVAPDVVTYNTILRSLCDSGKLKEAMEVLDR--QMQRECYPDVITYTILIEAT--CNDS 258
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
V ++ K + G +P +V+ N L+NG+ K +D+ + M G PN
Sbjct: 259 GVG-----QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPN 313
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T NI+ C G L + +G P +VT+N LI+ C+K L A +
Sbjct: 314 VITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 373
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + +P+ ++Y L++G C+E K+ A + MV RG PDIV+YNTL+ A CK+G
Sbjct: 374 KMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDG 433
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K + +L ++ G P T ++ G K G+ A L+ E++R G+ Y
Sbjct: 434 KADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYS 493
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L + + A + + PS YN +M LCK + A+ MV++
Sbjct: 494 TLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553
Query: 480 NIKPSLSTYRALI 492
KP+ +TY LI
Sbjct: 554 GCKPTKATYTILI 566
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 168/340 (49%), Gaps = 9/340 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E P Y +++ ++ AMK+L E+ + K C V + LI+
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRK--KGCKPDVVTYNVLIN-------GI 289
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + E+ K G QP++++ N +L + ++ +M R G P+
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
TFNIL + C+ + + LEK+ + G P+ ++YN L+ +C++ +++ A I
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R PD+VTY TL+ LCK+GK A ++ +++ +G SP +++YNT+I K GK
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + LL EM G+ PD T +++G G EG++ A+ + +++ + S Y+
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNA 529
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+++ LC+ + A L + + G P+ Y L+E +
Sbjct: 530 IMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 178/341 (52%), Gaps = 2/341 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICP 238
Y G + + +TF + G QPS+ S N LLN L++ D +++ + GI P
Sbjct: 180 YGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVP 239
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T NIL CK D+D LE++ GF P++VTY T++ Y KG + A ++
Sbjct: 240 NVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVF 299
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ R +PD TYT LM+G CK+G+ +A ++ M + P+ V+Y +I AYCKE
Sbjct: 300 GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKE 359
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K E +LL +M+ P + C ++ +EG++ A L +L + + I
Sbjct: 360 KKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAIT 419
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ + + A L + + G +PS YN L+ +C+ + +A L D MV+
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEF-EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ P+ TY LI FC +G + E + +M+EML++G LP+
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPN 519
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 161/329 (48%), Gaps = 2/329 (0%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR-NVLPDLVTYTTLMNGLCKE 323
+I G P + ++NTL+++ + R + +++ ++ ++P++ T L+ LCK+
Sbjct: 195 RIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKK 254
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+ A ++ M G P++V+Y T++ Y +G M ++ + E++ G PD T
Sbjct: 255 NDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTY 314
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I++ GY K+GR + A+ ++ E++ V + Y +I A C++ + +LL+ + +
Sbjct: 315 TILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLE 374
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
Y+PS + +++ LC+ V A L +++ +N P + LI C G+ E
Sbjct: 375 KKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L DE E G +P + LI G C ++ +A L +K + + +YN +
Sbjct: 435 ARKLFDE-FEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIK 493
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
F + G+ + + + + L G PN T
Sbjct: 494 GFCKVGNAREGIRVMEEMLDNGCLPNKAT 522
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 177/416 (42%), Gaps = 4/416 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI--GICPNTHTFNILT 247
K++ T + P +S +++ + + +D Q+++ G+ N T+ +
Sbjct: 83 LKSYTVTPPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMI 142
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
K + + + ++ + + T+I +Y GR A + + +
Sbjct: 143 EKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQ 202
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKS 366
P + ++ TL+N L + + H +F + G+ P++ + N L+ A CK+ + +
Sbjct: 203 PSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIR 262
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+L EM G P+ T I+ GY +G ++ A + E+ G Y L+ C
Sbjct: 263 VLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYC 322
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A +++ + ++ P+ Y ++E+ CK + L L D+M+++ PS +
Sbjct: 323 KKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSA 382
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+I C G+ A L ++L+ PD+ I LI+ C E V +A L F
Sbjct: 383 LCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEF 442
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K I T +YNA+ E G+L + L + G PN T +I K
Sbjct: 443 -EKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCK 497
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + ++K L P + L++ L K + + ++++E + G P+T T+
Sbjct: 395 GKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEK-GSIPSTLTY 453
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L C+ G++ + + + E+G P+ TYN LI +CK G + + M
Sbjct: 454 NALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLD 513
Query: 304 RNVLPDLVTYT 314
LP+ TY
Sbjct: 514 NGCLPNKATYA 524
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 195/396 (49%), Gaps = 38/396 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++GL+ E+ FR+ + P++ +CN +L+GL+K W++++EM R G+ P
Sbjct: 120 ALSQMGLLDEALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVP 176
Query: 239 NTHTFNILTH-----------------------------------VFCKNGDVDKVNGFL 263
+ T+N L + V C+ G +
Sbjct: 177 SVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLF 236
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ ++E G P+ TYN L+S +C+ +N AF LY+ + ++P+ V +TTL++G CK
Sbjct: 237 DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKA 296
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+ EA +F M G++P + YN+L+ + G QE+ SL EM G+ PD FTC
Sbjct: 297 KRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTC 356
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+V+G G++ A + ++ GV+++ Y+ LI C++ A + R+ +
Sbjct: 357 SIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTE 416
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P++ Y+ L++ K + A+ + EMV + I+P++ TY ALI G
Sbjct: 417 VGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 476
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
A EM+E+G+ P++ VL++G C E V A
Sbjct: 477 AFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDA 512
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 161/341 (47%), Gaps = 25/341 (7%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P++V VF LI + K E+ FR G P++ N L++G +
Sbjct: 281 PNAV-VFTTLID-------GFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSG 332
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ +Y+EM R+G+CP+ T +I+ C G + FLE + E+G + + YN
Sbjct: 333 DAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYN 392
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
LI YC+ G L +A M V P++V+Y++L++G K GK++ A ++ MV +
Sbjct: 393 ALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAK 452
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ P++V+Y LI + K G + + EM+ NGI P+ T ++V G +E R+ A
Sbjct: 453 GIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDA 512
Query: 400 LNLVVE--------LQRFGVSISRD---------IYDYLIVALCQDNRPFAATSLLERIG 442
+ V+E + F + + + IY LI L D + + A L +
Sbjct: 513 VRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMR 572
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ G + Y L+ C V +A++L +M+ +KP
Sbjct: 573 KSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 17/422 (4%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + + + + P++++ ++ L + CI ++++ M G+ PN +T+
Sbjct: 192 GAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTY 251
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L C+ DV+ +++ G P+ V + TLI +CK R ++A ++R M R
Sbjct: 252 NVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPR 311
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V P + Y +LM+G + G +EA L+ M GL PD + + ++ C G++Q
Sbjct: 312 FGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQV 371
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L + +G+ + ++ Y + G L AL + GV + Y LI
Sbjct: 372 AARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLID 431
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ + A ++ + G P++ Y L+ K + A EM++ I P
Sbjct: 432 GHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISP 491
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDE-----------------MLESGMLPDSQICRVL 526
+ T L+ C R +AV + E E ++P+S I L
Sbjct: 492 NAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTL 551
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I G ++ +A L + K I D+ +Y + G + M L +++G
Sbjct: 552 IYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGV 611
Query: 587 AP 588
P
Sbjct: 612 KP 613
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 162/339 (47%), Gaps = 2/339 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P L N ++ K R A+ L+ M RR ++P +VTY TL+N +G V +A ++
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ +MV R + P++++Y ++I C+EG + +++ L M G+ P+ +T +++ G+ +
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ SA L EL G+ + ++ LI C+ R A + + + G P++ +
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN LM+ + +AL L EM + P T ++ C G+ A ++ +
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G+ ++ LI+ YC ++ +A A + + SY+++ + ++ G +
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQ 440
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK--GMERKFQ 609
M + + G PN +T +IH K G++ F+
Sbjct: 441 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 479
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 156/319 (48%), Gaps = 3/319 (0%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
L+ + + G L++A Y++R ++ LP L +++GL K + R A +LF M+
Sbjct: 115 GVLVIALSQMGLLDEALYVFRRLW---TLPALPACNAVLDGLVKARRSRCAWELFDEMLR 171
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ P +V+YNTLI A +G + +++ + +M+ I P+ T ++ +EG +
Sbjct: 172 RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGD 231
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L ++ G+ ++ Y+ L+ CQ + +A L + + G +P+ ++ L++
Sbjct: 232 AERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLID 291
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK ++A + +M + P++ Y +L+ G + EA+SL EM G+ P
Sbjct: 292 GFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCP 351
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D C +++ G C + A L + + +YNA+ + + +G+L + +
Sbjct: 352 DEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATC 411
Query: 579 KRFLRLGFAPNNLTCKYMI 597
R +G PN ++ +I
Sbjct: 412 TRMTEVGVEPNVVSYSSLI 430
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 232/490 (47%), Gaps = 10/490 (2%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
+L+C+S + F + L ++ ++H+L +K++ A ++ L+E ++
Sbjct: 81 AILKCRSAEEAFRLFETSSISRLSKTTDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLR 140
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVG----LIRESFKT--FRKTLDVGFQ----PSIVS 207
++ L + ED +G LI E + F L V + P +
Sbjct: 141 RYSEPTNISHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCSPDSKA 200
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
C +LNGL++ D W Y+ M G+ P+ H +++L K G K L+++
Sbjct: 201 CLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMT 260
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G P++ Y I C++ ++ +A ++ +M V+P+L TY+ +++G CK G +R
Sbjct: 261 SLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLR 320
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+A+ L+ ++ L P++V + TL+ +CK ++ ++SL M+ G+ P+ + ++
Sbjct: 321 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLI 380
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G K G +L A+ L+ E++ +S Y LI LC + R A L +R+ +
Sbjct: 381 HGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIF 440
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
PS YN L+ CK ++ AL L EM ++P++ T+ LI +C + A+ L
Sbjct: 441 PSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGL 500
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EM G++PD LI+ + E ++ +A L + + ++ + + F +
Sbjct: 501 YFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 560
Query: 568 DGDLSKLMEL 577
+G LS ++
Sbjct: 561 EGRLSDAIDF 570
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 189/411 (45%), Gaps = 52/411 (12%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
L +KP Y + + L NK A KM EL+++ P+ + + +I
Sbjct: 260 TSLGVKPNVYIYTIYIRDLCRENKMEEAEKMF-ELMKIHGVVPN-LYTYSAMID------ 311
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
Y K G +R+++ +++ L P++V L++G K + ++ M + G+
Sbjct: 312 -GYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVD 370
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL---------------------- 275
PN + +N L H CK+G++ + G L ++E PD+
Sbjct: 371 PNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRL 430
Query: 276 -------------VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
VTYN+LI +CK+ + A L M V P+++T++TL++G CK
Sbjct: 431 FQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCK 490
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
++ A L+ M +G+ PD+V+Y TLI A+ KE M+E+ L +M+ GI+P+ T
Sbjct: 491 VRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVS---ISRDIYDY-----LIVALCQDNRPFAA 434
+V G+ KEGRL A++ +E + + R + Y LI LCQ+ A
Sbjct: 551 FACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRA 610
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ + G P + Y ++++ + + D ++L +M+ I P+L
Sbjct: 611 SRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNL 661
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 43/257 (16%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + F++ + PS V+ N L++G K I++ + EM G+ PN TF+
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFST 483
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L +CK ++ G ++ +G PD+VTY TLI ++ K+ + +A LY M
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAG 543
Query: 306 VLPD-------------------------------------------LVTYTTLMNGLCK 322
+ P+ V +T L+ GLC+
Sbjct: 544 IHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQ 603
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + A + F M G++PDI SY +++ A+ +E ++ ++ L +M+ GI P+
Sbjct: 604 NGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV 663
Query: 383 CQIIVQGYGKEGRLLSA 399
Q++ Y + G L SA
Sbjct: 664 NQLLAMFYQENGYLRSA 680
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%)
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ R + P + Y L C G + L+DEM G+ P+ I + I C E
Sbjct: 224 MISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENK 283
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ +AE + + + +Y+A+ + + + G+L + L K L PN +
Sbjct: 284 MEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343
Query: 596 MIHSLWKGME 605
++ K E
Sbjct: 344 LVDGFCKARE 353
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 179/322 (55%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V+CN L+N +L I + V+ ++ ++G PNT TF L C G + +
Sbjct: 117 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ GF + ++Y TLI CK G A L R + + V P++V Y+T+++G
Sbjct: 177 LNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDG 236
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+CK+ V +A L+ MV +G+SP++V+Y+ LI + GK++++ L +M+ I PD
Sbjct: 237 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPD 296
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I+V + K G++ AL LV E+ G + Y ++ ALC+ +R A +LL
Sbjct: 297 VYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLT 356
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P++ Y L++ LC + DA + ++++ + ++ TY + FC G
Sbjct: 357 KLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKG 416
Query: 500 RSGEAVSLMDEMLESGMLPDSQ 521
EA +L+ +M E+G +PD++
Sbjct: 417 LFDEASALLSKMEENGCIPDAK 438
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+L++C N + ++GLI +F F K L +G+ P+ ++ L+ GL I Q
Sbjct: 121 NLVNCNILIN-CFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF 179
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++++ +G N ++ L CK G+ L +++ + P++V Y+T+I CK
Sbjct: 180 HDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCK 239
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+NDAF LY M + + P++VTY+ L++G GK+++A LF++M+ + PD+ +
Sbjct: 240 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYT 299
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N L+ +CK GK+ + L+ EM G P+ T I+ K R+ A+ L+ +L+
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G+ + Y LI LC + A ++ E + GY ++ Y + CK
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFD 419
Query: 468 DALLLKDEMVDRNIKPSLSTYRAL 491
+A L +M + P TY +
Sbjct: 420 EASALLSKMEENGCIPDAKTYELI 443
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D ++ + R P FN + K+ V +K+E G P+LV
Sbjct: 66 NDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNC 125
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N LI+ +C+ G + AF ++ + + P+ +T+TTL+ GLC +G++ +A ++V
Sbjct: 126 NILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA 185
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G + +SY TLI CK G+ + + LL + G + P+ I+ G K+ +
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +L E+ G+S + Y LI + A L ++ + P + +N L++
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK ++ AL L DEM DR P++ TY +++ C R +AV+L+ ++ + G+ P
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRP 365
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ +LI+G C + A + K +Y +F F + G + L
Sbjct: 366 NMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALL 425
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ G P+ T + + SL+K E
Sbjct: 426 SKMEENGCIPDAKTYELIKLSLFKKGE 452
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 161/327 (49%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L+ Y++ +++ ++DA L+ + R+N P + + ++ L K L
Sbjct: 51 NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+M RG+ P++V+ N LI +C+ G + + S+ +++ G P+T T +++G +
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G++ ALN +L G ++ Y LI LC+ AA LL R+ P++ +Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ +++ +CK V DA L EMV + I P++ TY ALI F +G+ +AV L ++M+
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD +L++ +C ++ A L+ + Q + +Y+++ + + + K
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ L + G PN T +I L
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGL 377
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 119/210 (56%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++F + + + G P++V+ + L++G + + ++ +M I P+ +TFNI
Sbjct: 243 VNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNI 302
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L VFCK+G + ++++ + G P++VTY++++ + CK R++ A L + +
Sbjct: 303 LVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQG 362
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P++ TYT L++GLC GK+ +A +F ++ +G +V+Y + + +CK+G E+
Sbjct: 363 IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEAS 422
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+LL +M NG PD T ++I K+G
Sbjct: 423 ALLSKMEENGCIPDAKTYELIKLSLFKKGE 452
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 126/244 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + R+ QP++V + +++G+ K ++ + +Y EM GI PN
Sbjct: 204 KVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 263
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F G + K+ E PD+ T+N L+ +CK G+++ A L M
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM 323
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ R P++VTY+++++ LCK +V +A L ++ +G+ P++ +Y LI C GK+
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKL 383
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++++++ +++ G T ++ G+ K+G A L+ +++ G Y+ +
Sbjct: 384 EDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443
Query: 422 IVAL 425
++L
Sbjct: 444 KLSL 447
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
++ +AL V L ++P Y I+ + + + A + E+V K +V
Sbjct: 206 GETRAALDLLRRVDGKL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVS--KGISPNV 262
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ LIS + VG ++++ F K + +P + + N L++ K I
Sbjct: 263 VTYSALIS-------GFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISY 315
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ +EM G PN T++ + CK VDK L K++++G P++ TY LI
Sbjct: 316 ALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILID 375
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
C G+L DA ++ + + +VTY + G CK+G EA L +M G P
Sbjct: 376 GLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIP 435
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYE 370
D +Y + + K+G+ ++ L E
Sbjct: 436 DAKTYELIKLSLFKKGENDMAEKLHRE 462
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 167/342 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y ++ +R + F + D GF P + SCN ++ + L D Y EM R I P
Sbjct: 120 TYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISP 179
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T N++ FCK G ++K +K+E GF P + +YNTLI+ YC KG LN L
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M + V PD VT+ TL+NG C+ GK+ EA+++F M + P+ ++YNTLI Y +
Sbjct: 240 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 299
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + L EM+ NGI D T ++ G EGR A LV EL R + + +
Sbjct: 300 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 359
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C A L + + + G P+ + L+ + CK + A+ + EM +
Sbjct: 360 SALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSE 419
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
R+I P T L G+ A+ L EM ++P+
Sbjct: 420 RSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPEG 461
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++++ GF P + + N IS+ R + A YR M R + P++ T +M CK G
Sbjct: 136 QMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWG 195
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ +A ++F +M G SP I SYNTLI YC +G + L M NG+ PD T
Sbjct: 196 KLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFN 255
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ + G+L A + E++ V + Y+ LI Q L + + ++
Sbjct: 256 TLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRN 315
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + YN L+ LC A L E+ N+ P+ ST+ ALI C S A
Sbjct: 316 GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERA 375
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L M+ SG P+ ++LI+ +C +D + A
Sbjct: 376 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGA 410
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 146/330 (44%)
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
D +++L +Y + +L +A ++ M LP + + ++ + A
Sbjct: 108 DSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALT 167
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ M +SP++ + N ++ A+CK GK++++ + +M G P + ++ GY
Sbjct: 168 FYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYC 227
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
+G L S + L + +++ GV ++ LI C+ + A + + + VP+
Sbjct: 228 NKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTI 287
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
YN L+ + + L DEM+ IK + TY ALI C GR+ +A L+ E+
Sbjct: 288 TYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKEL 347
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
++P+S LI G C+ K+ +A L + + ++ + + F ++ D
Sbjct: 348 DRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDF 407
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+E+ + AP++ T + LW
Sbjct: 408 DGAVEVVREMSERSIAPDSDTLSELCRGLW 437
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ +L + K+R A +F +M G P + S N I A + + + EM
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQ 173
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I P+ +T +++ + K G+L A+ + +++ G S + Y+ LI C
Sbjct: 174 RYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLN 233
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+ L + ++G P +N L+ C+ + +A + EM ++ P+ TY LI
Sbjct: 234 SGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLI 293
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ +G S L DEML +G+ D LI G CME KA L+ ++ +
Sbjct: 294 NGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLV 353
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ +++A+ + + +L K +R G PN T K +I + K
Sbjct: 354 PNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCK 403
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + E+ K F + P+ ++ N L+NG ++ + ++++EM R GI
Sbjct: 260 GFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKA 319
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L C G K +++++ E P+ T++ LI+ C + AF LY
Sbjct: 320 DILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLY 379
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R P+ T+ L++ CK A ++ M R ++PD + + L
Sbjct: 380 KSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLS 439
Query: 359 GKMQESKSLLYEMMGNGIYPDTF 381
GK + + L EM + P+ F
Sbjct: 440 GKEELALKLCKEMEMKHLMPEGF 462
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 3/394 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS S N LL+ L+ +D + ++ R + P+ TFNI+ CK G + K
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY---LYRIMYRRNVLPDLVTYTTLMN 318
+ I G P +VTYNT+I YCK+GR ++ L + M + P+ VT+ L+N
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK+ A ++F M +G++ +V+Y+ L++ C EGK++E L+ EM G+ P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ G+ K+G + A + +++ V + Y L+ + ++ A ++
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + G P+ IYN L+ + L DEM + ++ + TY LI C
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G +AV L+DEML G+ P +INGYC + ++ A + K + + +Y
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTY 506
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N G + + EL L G PN +T
Sbjct: 507 NVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVT 540
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 175/356 (49%), Gaps = 4/356 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV---YEEMGRIGICP 238
K G +R++ + G PS+V+ N +++G K + + V +EM GI P
Sbjct: 197 KTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISP 256
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TFN+L + +CK+ + E+++++G +VTY+ L+ C +G++ + L
Sbjct: 257 NEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLV 316
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++P+L T +++NG CK+G + +A M + + P++V+Y L+ Y +
Sbjct: 317 DEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRL 376
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
KM+++ ++ M G G+ P+ ++ G+ + G S L+ E++ GV Y
Sbjct: 377 DKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTY 436
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI ALC A LL+ + G P YN ++ C+ ++ A ++ M
Sbjct: 437 NVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEK 496
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ ++ TY I C C +G+ E L++EMLE G++P+ + G MEK
Sbjct: 497 GKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM-MEK 551
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 168/330 (50%), Gaps = 3/330 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P + N L+S+ R++ A ++ RR V PDL T+ +++GLCK G++R+A +
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGK---MQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ GL+P +V+YNT+I YCK G+ M +LL EM+ GI P+ T ++V G
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K+ +A+ + E+++ G++ S Y L+ LC + + L++ + G VP+
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPN 327
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
L N ++ CK + DA D M +N+KP++ TY L+ + + + +A+++ +
Sbjct: 328 LATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKE 387
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M G+ P+++I LI G+ D LL K D +YN + G
Sbjct: 388 AMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG 447
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ K ++L L +G P +LT +I+
Sbjct: 448 EVRKAVKLLDEMLMVGLEPVHLTYNTIING 477
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ K + L VG +P ++ N ++NG + I +++ M + N T+
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTY 506
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
N+ C+ G +++ N L ++ E+G P+ VTY+T+ +KG D
Sbjct: 507 NVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPD 556
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 200/406 (49%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW-- 178
+ T +YC ++H+L ++ K L ++V K + DVF+ ++ T+ ++
Sbjct: 10 RHTLHSYCTMIHLLC-THQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYV 68
Query: 179 ------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + FR T + +C +L L++ W Y+E+
Sbjct: 69 FSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL FCK G++ + I + G P +V++NTLI+ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ PD+ TY+ L+NGLCKEGK+ EA++LF+ M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK K+ + + +M+ G+ PD T ++ G K+G L +L+ E+ G+
Sbjct: 249 HGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A L ++ Q+ Y L+ LC+ DA +
Sbjct: 309 PDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC S A L+ EM G +P
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVP 414
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 146/271 (53%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G +R + F G +PS+VS N L+NG +KL +D+ +++ M G P+
Sbjct: 146 FCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T++IL + CK G +D+ N ++ + G P+ VT+ TLI +CK +++ A +Y+
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PDL+TY TL+ GLCK+G++++ H L M+ GL PD +SY TLI CKEG
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + L +M+ I D ++ +EGR A ++ E+ G+ Y
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ A+ LL + +DG VP +
Sbjct: 386 MIINEFCKKRDSKTASKLLREMQRDGPVPGV 416
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 110/201 (54%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + F + LD G P+ V+ L++G K +D ++Y++M G+ P+
Sbjct: 218 KEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLI 277
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK G++ +V+ ++++ G PD ++Y TLI CK+G L A L M
Sbjct: 278 TYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKM 337
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++ D V YT L++ LC+EG+ +A ++ M+ GL PD +Y +I +CK+
Sbjct: 338 IQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDS 397
Query: 362 QESKSLLYEMMGNGIYPDTFT 382
+ + LL EM +G P T
Sbjct: 398 KTASKLLREMQRDGPVPGVVT 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 35/295 (11%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ LM CKEG++R A +F + GL P +VS+NTLI Y K G + E L M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G PD +T I++ G LC++ +
Sbjct: 199 ASGAQPDVYTYSILING-----------------------------------LCKEGKLD 223
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A L + +G VP+ + L+ CK + V A+ + +M+ + + P L TY LI
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLI 283
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G + L+DEM+ +G+ PD LI+G C E D+ A L ++
Sbjct: 284 YGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIR 343
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
D +Y A+ + +G ++ + L +G P+N T +I+ K + K
Sbjct: 344 LDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSK 398
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 201/406 (49%), Gaps = 11/406 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCNWAYVK 182
P + Y +++H L K A+ + ++ E VK P+ V + L+ C Y
Sbjct: 384 PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK--PYIV-TYHSLLLC-------YCV 433
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ K + + GF P++V+ L+ G + D+ + + EM + G+ N +T
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L + C G V +V L++ E EGF P +TYN++I+ + K G + AF +Y+ M
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P++VTYT+ ++G CK A ++ + + +GL PDI +YN+LI+ +C+EG M
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMS 613
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +L M+ +G+ P+ + GY + AL ++ + G+ + Y LI
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLI 673
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+D A L + G +P + L LC+ + DA L DEM +I+
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR 733
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P++ Y LI + G+ EA L DEMLE ++PD +L+
Sbjct: 734 PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 205/458 (44%), Gaps = 42/458 (9%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK G + E+ + L G + S+V L++G + + ++EE R G+ P
Sbjct: 258 VKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTD 317
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ +L + G +K ++ + G P +N +I DA L++
Sbjct: 318 VTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE 377
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD TY L++ LC+ K+REA L+ +M G+ P IV+Y++L+ YC G
Sbjct: 378 MADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M E+ L EM G G P+ T +++G+ + A L+ E+++ GVS + Y+
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC R +L+R +G+VP+ YN ++ K + A + +M +
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 481 IKPSLSTYRALI-------CC----------------------------FCGIGRSGEAV 505
I P++ TY + I CC FC G A+
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHAL 616
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ---IYDTESYNAVF 562
++ ML+ G+LP+ + I GY K++ E L F+ K + DT +Y +
Sbjct: 617 QVLVLMLKDGLLPNISVYNSFITGY---KNLKMMEEALRFYEKMIKEGIDLDTATYTTLI 673
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F++DG+++ ++L + G P+++T + H L
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 202/461 (43%), Gaps = 52/461 (11%)
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ---- 226
CTE+ G+ ++++ R+ D G PS N ++ GLL D+ W+
Sbjct: 326 GCTEE--------GMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLN----DKLWKDAVS 373
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++EM GI P+ T+NIL H C+ + + EK+ E G P +VTY++L+ YC
Sbjct: 374 LFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM----------------------------- 317
G +++A LY M + P++VTYTTLM
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492
Query: 318 ------NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
NGLC G+V E ++ R G P ++YN++I + K G M + ++ +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
GI P+ T + GY K AL ++ +++ G+ Y+ LI CQ+
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A +L + +DG +P++ +YN + + +AL ++M+ I +TY L
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I F G A+ L EM+ G +PD L +G C D++ A LL +
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ YN + N + +G L + L L P++ T
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 180/384 (46%), Gaps = 1/384 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ ++ K D ++++EM I P+ ++ CK D ++ L K+++
Sbjct: 181 DVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQD 240
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
GF P T+N+++ K GR+ +A ++ + +V TTLM+G C + +VR+
Sbjct: 241 AGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRK 300
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +F + GL P V+Y LI +EG +++ L +M +G+ P T ++++
Sbjct: 301 ALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIK 360
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G + A++L E+ G+ + Y+ LI LCQ + A +L E++ + G P
Sbjct: 361 GLLNDKLWKDAVSLFKEMADSGIPDAF-TYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ Y+ L+ C + +A+ L EM + P++ TY L+ +A +L+
Sbjct: 420 YIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALL 479
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM ++G+ + LING C+ V + +L F + + +YN++ N F +
Sbjct: 480 AEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Query: 569 GDLSKLMELQKRFLRLGFAPNNLT 592
G + + ++ G PN +T
Sbjct: 540 GMMGSAFAVYQQMCAKGIPPNIVT 563
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 180/443 (40%), Gaps = 36/443 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+ ++ + F + +P C+ + L KL ++ V +M G P
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN + V K G +++ +++ G +V TL+ YC + + A ++
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R ++P VTYT L+ G +EG +A++L +M GL P +N +I +
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ SL EM +GI PD FT I++ + ++ ALNL ++ GV Y L
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
++ C + A L + G+ P++ Y LM+ + A L EM +
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Query: 482 K-----------------------------------PSLSTYRALICCFCGIGRSGEAVS 506
P+ TY ++I F G G A +
Sbjct: 488 SCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFA 547
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ +M G+ P+ I+GYC + A +L K D +YN++ F
Sbjct: 548 VYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFC 607
Query: 567 EDGDLSKLMELQKRFLRLGFAPN 589
++G++S +++ L+ G PN
Sbjct: 608 QEGNMSHALQVLVLMLKDGLLPN 630
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 161/403 (39%), Gaps = 34/403 (8%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ P+ + L V ++ L ++ +G D ++ ++ + K+G +DA
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L+ M + PD + + LCK A + +M G P ++N+++
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
K G+M+E+ + E++ G ++ GY + + AL++ E R G+ +
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI ++ P A L ++ G +PS +N +++ L DA+ L
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFK 376
Query: 475 EMVDRNI----------------------------------KPSLSTYRALICCFCGIGR 500
EM D I KP + TY +L+ C+C G
Sbjct: 377 EMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EAV L EM G P+ L+ G+ + +KA ALL + + +YN
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ N G + ++ E+ KRF GF P +T +I+ K
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKA 539
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 3/274 (1%)
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M RG++PD S L+ + ++ +LL EM G G D + ++++ KEG
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
A+ L E+ + + + I +LC+ A +L ++ G+VP +N
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ L K + +AL +KDE++ K S+ L+ +C +A+ + +E L G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++P VLI G E KA L + T +N V D +
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
L K G P+ T +IH W RK +
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIH--WLCQRRKIR 403
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 1/288 (0%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R V PD + T L+ + +A L M +G D ++ ++ A KEG
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ L EM + I PD C + + K AL ++ ++Q G ++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L + R A + + + G S+ + LM C V AL + +E +
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P+ TY LI G +A L +M + G+LP + ++I G +K A
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
+L A I D +YN + + + + + + L ++ G P
Sbjct: 373 SLFKEMADS-GIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKP 419
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 235/526 (44%), Gaps = 49/526 (9%)
Query: 116 VKNDL---EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+K DL ++KP YC +V+ L +F ++M+ E++ L + P V L+
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL-RFSPSEAAV-SSLVE- 340
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G I E+ ++ +D G P++ N L++ L K + +++ MG
Sbjct: 341 ------GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+IG+ PN T++IL +FC+ G +D FL ++ + G + YN+LI+ +CK G ++
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI------- 345
A M + + P +VTYT+LM G C +GK+ +A +L+H M +G++P I
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 346 ----------------------------VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
V+YN +I YC+EG M ++ L EM GI
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PDT++ + ++ G G+ A V L + ++ Y L+ C++ + A S+
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + Q G L Y L++ K L EM DR +KP Y ++I
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G EA + D M+ G +P+ +ING C VN+AE L + + +
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 558 YNAVFNMFAE-DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y ++ + + D+ K +EL L+ G N T +I +
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCR 799
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 239/527 (45%), Gaps = 52/527 (9%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ +L+ D L FFN++ +++++C+++H L N F A +L L+
Sbjct: 73 VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKV-GLIRESFKTFRKTLD-----------VGFQ 202
DVF L SC E C + L+ + + R+ LD V
Sbjct: 133 RAL---KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLL 189
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + + LL+GL+K +++ +M +GI P+ + + + C+ D+ +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
+ +E G D ++V YN LI CKK ++ +A + + + +++ PD+VTY TL+ GLC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
K GK+ EA L R+V G+SP++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
YN LI + CK K E++ LL++ MG G+ P+ T I++ + + G+L +AL+ + E+
Sbjct: 370 YNALIDSLCKGRKFHEAE-LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ +S Y+ LI C+ AA + + P++ Y LM C +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
AL L EM + I PS+ T+ L+ G +AV L +EM E + P+ V+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
I GYC E D++KA L +K + DT SY + + G S+
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 201/459 (43%), Gaps = 44/459 (9%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ +SA F + +++PT Y ++ K + A+++ E+ K
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG--KGIAP 505
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S+ F L+S + GLIR++ K F + + +P+ V+ N ++ G + +
Sbjct: 506 SIYTFTTLLS-------GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++ +EM GI P+T+++ L H C G + F++ + + + + + Y L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ +C++G+L +A + + M +R V DLV Y L++G K + L M RGL
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD V Y ++I A K G +E+ + M+ G P+ T ++ G K G + A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 402 LVVELQRF-----------------------------------GVSISRDIYDYLIVALC 426
L ++Q G+ + Y+ LI C
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A+ L+ R+ DG P Y ++ LC+ + V A+ L + M ++ I+P
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
Y LI C G G+A L +EML G++P+++ R
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 206/404 (50%), Gaps = 8/404 (1%)
Query: 181 VKVGLIRESFKTFRKTLDVGF---QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
K G ++ F K+L F QPSI N LL ++ N ++ +Y++M +
Sbjct: 86 AKSGFFNKAISHF-KSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P +TFN+L + C +G ++ +K+ G +P+ T+ L+ YC+ G + L
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M +LP+ V Y TL++ CKEGK +A +L +M GL P + ++N+ I A C
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264
Query: 358 EGKMQESKSLLYEMMGN---GI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
GK+ E+ + +M + G+ +P+ T ++++ G+ KEG L A LV ++R I
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ + Y+ ++ L ++ + A +L+ + G P + YN +M+ LCK ++DA +L
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
M+ I P TY L+ +C G+ EA +L+ EM+ + P++ C VL++ E
Sbjct: 385 GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKE 444
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+++AE LL +K DT + N + N +G L K +E+
Sbjct: 445 GRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 214/475 (45%), Gaps = 62/475 (13%)
Query: 183 VGLIR-----ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+GLIR E++ ++ L +G +P I S N +++GL K + + M R GI
Sbjct: 334 LGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGIL 393
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+T T++ L H +C G V + N L ++ P+ T N L+ S K+GR+++A L
Sbjct: 394 PDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENL 453
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG----------------- 340
+ M + D VT ++N LC G++ +A ++ + M G
Sbjct: 454 LQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDD 513
Query: 341 ------LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+PD+V+Y+T+I CK G++ ++K EMM G+ PD+ + + +EG
Sbjct: 514 TISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREG 573
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
++ SA ++ ++++ G + + Y+ LI+ L N+ F L++ + + G P + YN
Sbjct: 574 KISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYN 633
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI---------------- 498
++ LC+ + DA + DEM+ + I P++S++R LI FC
Sbjct: 634 HMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV 693
Query: 499 ------------------GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
G+ EA L + L+ + + + LI+ C ++ + A
Sbjct: 694 CGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAAS 753
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+L K +D S+ V + F + G+ EL +R + + N Y
Sbjct: 754 DVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAY 808
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 205/431 (47%), Gaps = 20/431 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL------LKLNCIDQCWQVYEEMG 232
++ K G ++ K K + G P + + N ++ L L+ + I + Q+ EE+G
Sbjct: 226 SFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELG 285
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
PN T+ ++ FCK G +++ ++ ++ +L +YN + + G+L
Sbjct: 286 LPH--PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLL 343
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+A+ + + M + PD+ +Y +M+GLCK G + +A L M+ G+ PD V+Y+TL+
Sbjct: 344 EAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLL 403
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
YC +GK+ E+ +LL+EM+ N P+T+TC +++ KEGR+ A NL+ ++ G
Sbjct: 404 HGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYG 463
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ + +I ALC + + A ++ + G + N + L+
Sbjct: 464 VDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIG------------LV 511
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
D + + P L TY +I C GR +A EM+ G+ PDS I I+ +C
Sbjct: 512 DDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCR 571
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E ++ A +L K+ ++YN++ + +L L G +P+ T
Sbjct: 572 EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCT 631
Query: 593 CKYMIHSLWKG 603
+M++ L +G
Sbjct: 632 YNHMLNCLCEG 642
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 200/431 (46%), Gaps = 46/431 (10%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L +V K + VF ++
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLVEA-KSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + FR T +C +L L+KL W Y+E+
Sbjct: 69 FSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G P+ + FNIL H FCK G++ + I + P +V++NTL++ Y + G L+
Sbjct: 129 ECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ EA+++ + M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK GK+ + + +M+ G PD T ++ G + G L A +LV E+ G+
Sbjct: 249 DGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ LEI EL
Sbjct: 309 PDKITYTTLIDGSCKEG-------------------DLEITFEL---------------- 333
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+ M+ NI+ TY ALI C GR+G+A ++ EML G+ PD+ +++N +C
Sbjct: 334 RKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCK 393
Query: 533 EKDVNKAEALL 543
DV A LL
Sbjct: 394 TGDVKTASKLL 404
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 146/271 (53%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G +R + F +PS+VS N L+NG ++L +D+ +++ M G+ P+
Sbjct: 146 FCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D+ N L ++ + G P+ VT+ TLI +CK G+++ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + LPDL+TY TL+ GLC+ G + +A L M+ +GL PD ++Y TLI CKEG
Sbjct: 266 QMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + L M+ I D T ++ G +EGR A ++ E+ G+ Y
Sbjct: 326 DLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
++ C+ A+ LL + ++G VP +
Sbjct: 386 MIMNEFCKTGDVKTASKLLREMQRNGPVPGV 416
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 146/329 (44%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
DL ++ L+ +Y + G + DA +R+ + + T ++ L K R +
Sbjct: 65 DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G P + +N L+ +CKEG+M+ ++ + + + P + ++ GY +
Sbjct: 125 KEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI LC++++ A +L + +G VP+ +
Sbjct: 185 GDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF 244
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V A+ + +M+ + P L TY LI C G G+A L++EM+
Sbjct: 245 TTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIM 304
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD LI+G C E D+ L ++ D +Y A+ + +G
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGD 364
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + L +G P+N T +++ K
Sbjct: 365 AEKMLREMLTVGLKPDNGTYTMIMNEFCK 393
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A +ML E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L GF P +++ N L+ GL + + Q + EEM G+ P+
Sbjct: 251 HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ +++ E D VTY LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + PD TYT +MN CK G V+ A +L M G P +V+
Sbjct: 371 EMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 179/354 (50%), Gaps = 7/354 (1%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI+ AY++ G +R++ + +R T + F +C +L L+KL
Sbjct: 60 VFSGLIT-------AYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLV 112
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
W Y+E+ G + + FNIL H FCK G++ + I + G P +V++NTL++
Sbjct: 113 WGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNG 172
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
Y + G L++ F L M+ V PD+ TY+ L+NGLCKE K+ A++LF M+ +GL P+
Sbjct: 173 YIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPN 232
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V++ TLI +CK G++ + + +M+ + D T ++ G K+G L A NL+
Sbjct: 233 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLID 292
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E++ G+ + Y LI C++ A +R+ Q+ +Y L+ LC+
Sbjct: 293 EMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEG 352
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
DA + EM+ +KP TY +I FC G L+ EM G +P
Sbjct: 353 RSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 406
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 150/271 (55%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G IR + F G +PS+VS N L+NG ++L +D+ +++ M G+ P+
Sbjct: 138 FCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPD 197
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y+
Sbjct: 198 VYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 257
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++ DL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKEG
Sbjct: 258 QMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEG 317
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 318 DLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYT 377
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DG+VPS+
Sbjct: 378 MIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 408
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 139/353 (39%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 31 VVSRKGKGSASAVFAAILETKGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFW 90
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CKEG+++ ++S+
Sbjct: 91 VPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRVARSV 150
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV
Sbjct: 151 FDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVE--------------- 195
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + A L DEM+D+ + P+ T
Sbjct: 196 --------------------PDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVT 235
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + D LI G C + D+ +A+ L+
Sbjct: 236 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMR 295
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++GDL E +KR ++ +++ +I L
Sbjct: 296 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGL 348
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 194 VEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLV---PNGV-TFTTLID-------G 242
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 243 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPD 302
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ +++ +E D V Y TLIS C++GR DA + R
Sbjct: 303 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLR 362
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + PD TYT ++N CK+G V +L M G P +V+
Sbjct: 363 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 122/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R L DI ++ L
Sbjct: 5 LYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGL 64
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 65 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECGY 124
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A S+ + I + G PS+ +N LM + + +
Sbjct: 125 PASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 184
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + A L DEML+ G++P+ LI+G+C
Sbjct: 185 LKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHC 244
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + L G P+ +
Sbjct: 245 KNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKI 304
Query: 592 TCKYMI 597
T +I
Sbjct: 305 TYTTLI 310
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM CK + A + D + ++PS+ ++ L+ + +G E
Sbjct: 123 GYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEG 182
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 183 FRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDG 242
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L + + +T +I+ L K
Sbjct: 243 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCK 280
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 36/444 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+ + L GL + W + + + G N + FN + H FC +G V K
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++ GF PD+ +Y+ L+ CK+G + +Y+ M R + P+LV+Y++L++G
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362
Query: 320 LCKEGKVREAHQLFHR-----------------------------------MVHRGLSPD 344
LC+ G+V A +LF R MVH PD
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+Y++LI+AYC+ +++E+ + M+ +GI P+ TC I+V G+ EG + A +
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++++FGV S Y +I LC+ N+P + + + GYVP +Y+ +++ K
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A L +MVD KP++ TY +LI C + E ++L M+ G+ PD +
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LI YC ++ A + + D+ Y + F++ + + +
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662
Query: 585 GFAPNNLTCKYMIHSLWK-GMERK 607
G P +T +I +K G E+K
Sbjct: 663 GLTPTVVTYTDLIVGYFKIGDEKK 686
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 176/345 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + +F+ F++ D GF+ + + +L+G + ++ C+ ++ +M P+ +
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ L + +C++ + + E + +G P++VT L+ + +G + +AF +
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V+P L TY +++GLCK K + +F M+ RG PD V Y+ +I + K +
Sbjct: 485 RQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
QE+ L Y+M+ G P+ FT ++ G + +L + L + G++ R +Y L
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSL 604
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + AA + + +G +Y L+ K ++ A L +EM+++ +
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P++ TY LI + IG +A+++ + ML++G+ PD+++ +L
Sbjct: 665 TPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL 709
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 203/451 (45%), Gaps = 43/451 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+V++ + ++ T+ + VG + + CNFLL L++ N I ++++M G PN
Sbjct: 153 FVELSMFEDALVTYVEAKKVGVELQV--CNFLLKRLVEGNQIMYARSLFDDMKSSGPSPN 210
Query: 240 THTFNILTHVF-------------------------------------CKNGDVDKVNGF 262
+++++L ++ C V F
Sbjct: 211 VYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNF 270
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + + G+ + +N +I +C G+++ A ++ M + +PD+ +Y+ L++GLCK
Sbjct: 271 LQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCK 330
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G V + + M G++P++VSY++L+ C+ G+++ + L + G D
Sbjct: 331 QGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIV 390
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLER 440
I++ G + L +L ++ + D Y+Y LI A C+ + A + E
Sbjct: 391 YSIVLHGCCQHLDLEICYDLWNDMVHH--NFVPDAYNYSSLIYAYCRHRQLKEALEVFEL 448
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ DG P++ L+ + +A L D++ + PSL TYR +I C + +
Sbjct: 449 MVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNK 508
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+ + +M++ G +PD+ + ++I+G+ D+ +A L + + +Y +
Sbjct: 509 PNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTS 568
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ N D L ++M L K + G AP+ +
Sbjct: 569 LINGLCHDDKLPEVMTLFKHMIGEGLAPDRI 599
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+AY + ++E+ + F + G P++V+C L++G I + + +++ + G+
Sbjct: 431 YAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVV 490
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+ ++ H CK + + G + + G+ PD V Y+ +I + K L +AF L
Sbjct: 491 PSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRL 550
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y M P++ TYT+L+NGLC + K+ E LF M+ GL+PD + Y +LI YCK
Sbjct: 551 YYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCK 610
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
M+ + + EM G+ D+F ++ G+ K + A + E+ G++ +
Sbjct: 611 RSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVT 670
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
Y LIV + A ++ + Q G P ++
Sbjct: 671 YTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKL 705
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 66/156 (42%)
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G P+ Y + LC V A + R + + A+I FC G+ +
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ + D M + G +PD +L++G C + DV +L A+ + SY+++ +
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G + EL KR GF +++ ++H
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL VE ++ GV + + ++L+ L + N+ A SL + + G P++ Y+ LM
Sbjct: 162 ALVTYVEAKKVGVELQ--VCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMS 219
Query: 459 SL---CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
K LL + V+ ++P+ +TY + C + A + + + + G
Sbjct: 220 MYTHGAKLCLEEALELLSEMEVE-GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRG 278
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++ +I+G+C + V+KA + K + D SY+ + + + GD+
Sbjct: 279 YPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGY 338
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ R G PN ++ ++H L +
Sbjct: 339 YMLVEMARNGITPNLVSYSSLLHGLCRA 366
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 207/437 (47%), Gaps = 21/437 (4%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SV 163
D+ AL FFNW + ++ T +Y ++ IL N + A L + + +
Sbjct: 91 DTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEA 149
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
F L+ + + GL +ES K F G PS+V+ N LL LLK +
Sbjct: 150 RFFNSLMR-------NFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNM 202
Query: 224 CWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+VY+EM G+ P+T TFNIL FC NG VD + G +PD+VTYNTL+
Sbjct: 203 AKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLV 262
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNV--LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
C+ G++ A+ + + M +++V P++VTYTTL+ G C + ++ +A +F MV++G
Sbjct: 263 DGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQG 322
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSA 399
L + ++YNTLI C+ K ++ K +L G+G + PDT T ++ + G L A
Sbjct: 323 LKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDA 382
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER-------IGQDGYVPSLEI 452
L + + + Y L+ +LCQ A LL++ + DG P +
Sbjct: 383 LKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAA 442
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN + + LC+ A +++ R + S Y+ LI C G L+ ML
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS-YKTLIMGHCKEGTFESGYELLVLML 501
Query: 513 ESGMLPDSQICRVLING 529
LPD + LING
Sbjct: 502 RKDFLPDFETYESLING 518
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 183/404 (45%), Gaps = 13/404 (3%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
V P++V+ L+ G I++ V+EEM G+ N T+N L C+ +K
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEK 345
Query: 259 VNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ LE +G F PD T+NTL+ +C G L+DA ++ M + PD TY+ L+
Sbjct: 346 IKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALV 405
Query: 318 NGLCKEGKVREAHQLFHRMVHR-------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
LC+ G +A L +++ R G P + +YN + C+ GK ++++ +
Sbjct: 406 RSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQ 465
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
+M G D + + ++ G+ KEG S L+V + R + Y+ LI L ++
Sbjct: 466 LMRRGT-QDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDK 524
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
P A LE++ + + P+ ++ ++ L + +++ L M+D+NI+ +LS
Sbjct: 525 PLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTG 584
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
+ G G + +A L+ + G S LI C + V + LL F +
Sbjct: 585 CVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCHCRKVIQGSKLLLFSLESH 641
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
Q D + N V E LS+ L + + +G L+C+
Sbjct: 642 QFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMG-VHQQLSCQ 684
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 169/369 (45%), Gaps = 12/369 (3%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIM 301
FN L F + G + ++ G P +VT+N+L++ K+GR N A +Y ++
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD T+ L+ G C G V + ++F+ + G PD+V+YNTL+ C+ GK+
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 362 QESKSLLYEMMGNGI--YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ +++ M + P+ T +++GY + + AL + E+ G+ + Y+
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 420 YLIVALCQDNRPFAATSLLERIGQDG-YVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ + +LE DG + P +N LM C ++ DAL + + M +
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY-------C 531
I+P +TY AL+ C G +A L+D++LE +L C+ L+ Y C
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLC 451
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
KAE ++ D SY + ++G EL LR F P+
Sbjct: 452 ETGKTKKAEKAFRQLMRR-GTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFE 510
Query: 592 TCKYMIHSL 600
T + +I+ L
Sbjct: 511 TYESLINGL 519
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 139/333 (41%), Gaps = 50/333 (15%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D F P + N L++ +D +V+E M + I P++ T++ L C+ G +
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415
Query: 258 KVNGFLEKIEEE--------------GFDP---------------------------DLV 276
K L+K+ E ++P D
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP 475
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+Y TLI +CK+G + L +M R++ LPD TY +L+NGL K A Q +M
Sbjct: 476 SYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKM 535
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD---TFTCQIIVQGYGKE 393
+ P+ ++++++ ++G+ ES SL+ M+ I + + C ++ G G
Sbjct: 536 LRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMN 595
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A LV L G S+ + LI LC + + LL + +++
Sbjct: 596 DK---AFQLVHLLYGKGYSVK---MEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLC 649
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
N ++ LC+ + +++A L ++V+ + LS
Sbjct: 650 NTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLS 682
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 51/315 (16%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + ++L+I+P S+ Y +V L + A +L +L+E + S D +
Sbjct: 382 ALKVFERM-SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE--RKILLSGDGCKP 438
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFR-------------KTLDVG--------------- 200
L++ + G +++ K FR KTL +G
Sbjct: 439 LVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLV 498
Query: 201 ------FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
F P + L+NGLL ++ Q E+M R PN+ TF+ + + G
Sbjct: 499 LMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQG 558
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV---LPDLV 311
+ ++ + ++ +L + G + AF L ++Y + + +L+
Sbjct: 559 RTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELI 618
Query: 312 TYTTLMNGLCKEGKVREAHQ--LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
Y LC KV + + LF H+ + D+ NT+IF C+ K+ E+ SL Y
Sbjct: 619 RY------LCHCRKVIQGSKLLLFSLESHQFVDMDLC--NTVIFQLCEINKLSEAFSLYY 670
Query: 370 EMMGNGIYPDTFTCQ 384
+++ G++ +CQ
Sbjct: 671 KLVEMGVHQQ-LSCQ 684
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 209/444 (47%), Gaps = 36/444 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+ + L GL + + W + + + G N++ FN + H FC +G V K
Sbjct: 243 GVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKA 302
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++ GF PD+ +Y+ L+ CK+G + +Y+ M R + P+LV+Y++L++G
Sbjct: 303 VEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362
Query: 320 LCKEGKVREAHQLFHR-----------------------------------MVHRGLSPD 344
LC+ G+V A +LF R MVH PD
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+Y++LI+AYC+ +++E+ + M+ +GI P+ TC I+V G+ EG + A +
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++++FGV + Y +I LC+ N+P + + + GYVP +Y+ +++ K
Sbjct: 483 KVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +A L +MVD KP++ TY +LI C + E ++L M+ G+ PD +
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYT 602
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
LI YC ++ A + + D+ Y + F++ + + +
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662
Query: 585 GFAPNNLTCKYMIHSLWK-GMERK 607
G P +T +I +K G E+K
Sbjct: 663 GLTPTVVTYTDLIIGYFKIGDEKK 686
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 207/427 (48%), Gaps = 10/427 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+V++ + ++ T+ + VG + + CNFLL GL++ N I ++++M G P
Sbjct: 152 VFVELSMFEDALVTYVEAKKVGVELQV--CNFLLKGLVEGNQIMYVRSLFDDMKISGPSP 209
Query: 239 NTHTFNILTHVFCKNGD--VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
N +++++L ++ +++ L ++E EG P+ TY T + C+ ++ A+
Sbjct: 210 NIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWN 269
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+++ +R + + +++G C +G+V +A ++F M G PD+ SY+ L+ C
Sbjct: 270 FLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLC 329
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K+G + +L EM NGI P+ + ++ G + GR+ A L L+ G
Sbjct: 330 KQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHI 389
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+Y ++ CQ L + +VP Y+ L+ + C+ + +AL + + M
Sbjct: 390 VYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELM 449
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ I P++ T L+ F G GEA +D++ + G++P+ RV+ING C V
Sbjct: 450 ICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLC---KV 506
Query: 537 NKAEALLGFFA---KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
NK + G FA K+ + DT Y+ + + F + DL + L + + G PN T
Sbjct: 507 NKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTY 566
Query: 594 KYMIHSL 600
+I+ L
Sbjct: 567 TSLINGL 573
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 176/345 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + +F+ F++ D GF+ + + +L+G + ++ C+ ++ +M P+ +
Sbjct: 365 RAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAY 424
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ L + +C++ + + E + +G P++VT L+ + +G + +AF +
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V+P+L TY ++NGLCK K + +F M+ RG PD V Y+ +I + K +
Sbjct: 485 RQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
QE+ L Y+M+ G P+ FT ++ G + +L + L + G++ R +Y L
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSL 604
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + AA + + +G +Y L+ K ++ A L +EM+++ +
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P++ TY LI + IG +A+ + + ML++G+ PD+++ +L
Sbjct: 665 TPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL 709
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 189/411 (45%), Gaps = 1/411 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + F GF P + S + L++GL K + + + EM R GI PN ++
Sbjct: 297 GQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSY 356
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L H C+ G V+ ++++++GF D + Y+ ++ C+ L + L+ M
Sbjct: 357 SSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVH 416
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
N +PD Y++L+ C+ +++EA ++F M+ G+ P++V+ L+ + EG + E
Sbjct: 417 HNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGE 476
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L ++ G+ P+ T ++I+ G K + + ++ + G +Y +I
Sbjct: 477 AFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIID 536
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ A L ++ +G P++ Y L+ LC D + + + L M+ + P
Sbjct: 537 GFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTP 596
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
Y +LI C+C A+ + EM G+ DS + LI G+ ++ A+ +
Sbjct: 597 DRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFM 656
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN-NLTC 593
K +Y + + + GD K M + L+ G AP+ L+C
Sbjct: 657 EEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSC 707
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 40/326 (12%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+AY + ++E+ + F + G P++V+C L++G I + + +++ + G+
Sbjct: 431 YAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVV 490
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+ ++ + CK + V G + + G+ PD V Y+ +I + K L +AF L
Sbjct: 491 PNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRL 550
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y M P++ TYT+L+NGLC + K+ E LF M+ GL+PD + Y +LI YCK
Sbjct: 551 YYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCK 610
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
M+ + + EM G+ D+F ++ G+ K
Sbjct: 611 RSNMKAALEIFREMETEGLSADSFVYTCLIGGFSK------------------------- 645
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L D A +E + G P++ Y +L+ K A+++ + M+
Sbjct: 646 ------VLAMD----GAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSML 695
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGE 503
I P A + C G+G G+
Sbjct: 696 QAGIAPD-----AKLSCILGLGNDGD 716
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS--GEAVSL 507
L++ N L++ L + + + L D+M P++ +Y L+ + + EA L
Sbjct: 176 LQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQEL 235
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ EM G+ P++ + G C K V A L ++ ++ +NAV + F
Sbjct: 236 LSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCH 295
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
DG + K +E+ + GF P+ + ++ L K
Sbjct: 296 DGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCK 330
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF J+
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIPEA-KTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK ++ N E++ + G P+ VT+ TLI +CK GR+ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 103/190 (54%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + LD G P+ V+ L++G K + ++Y++M + P+ T+N L + CK
Sbjct: 229 FEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD+ + ++++ +G PD +TY TLI CK+G L A + M + N+ D V
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVA 348
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT L++GLC+EG+ +A ++ M+ GL P+I +Y +I +CK+G + LL EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 373 GNGIYPDTFT 382
+G P T
Sbjct: 409 RDGYVPSVVT 418
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 IIAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L +EML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 221/515 (42%), Gaps = 40/515 (7%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + PT+ Y ++ L + A++ L +V F
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVR--SGWRPDAYTFNS 193
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI Y + + + F K GF +VS L+ GL + ID+ +++
Sbjct: 194 LIV-------GYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELF 246
Query: 229 EEMGRI----------GIC---------------------PNTHTFNILTHVFCKNGDVD 257
EM + G+C P+T + + C+
Sbjct: 247 GEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 306
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ L+++ E+G P +VT +I++YCK+GR++DA + +M R P++ TY L+
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
G C EGKV +A L ++M G++PD V+YN LI C +G ++ + LL M G+G+
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
D +T ++ K+GR A +L L+ G+ + ++ LI LC+ + A
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 486
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
LE++ G P Y+ +E LCK + L EM+ +++KPS Y +I
Sbjct: 487 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK 546
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G EM+ SG PD + YC+E +N+AE +L +K DT +
Sbjct: 547 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
YN + + A G + + K+ + PN T
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 641
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 226/537 (42%), Gaps = 63/537 (11%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCN 177
+L +P++ Y +V K A +ML E+ E + C +++CT N
Sbjct: 282 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC---------VVTCTAVIN 332
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY K G + ++ + G +P++ + N L+ G + + + +M G+
Sbjct: 333 -AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+N+L C +G ++ L +E +G D TYN LI++ CK GR + A L
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + R + P+ VT+ +L+NGLCK GK A + +MV G +PD +Y++ I CK
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 511
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIV------------------------------ 387
QE S + EM+ + P T I++
Sbjct: 512 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 571
Query: 388 -----QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+ Y EGRL A N+++E+ + GV++ Y+ L+ + A S+L+++
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK-----------------PSL 485
VP+ Y L+ L + V D L L V + I+ P+
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +++ F GR+ EA SL+ M E + + I L+ +C K A L+
Sbjct: 692 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 751
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ I SY + + +G K E+ ++P+ + K +I L K
Sbjct: 752 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 808
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 162/343 (47%), Gaps = 13/343 (3%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P TYN +I S C++ L A +M R PD T+ +L+ G C+ +V A L
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F +M RG + D+VSY TLI C+ G++ E+ L EM PD +V+G
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPDMHMYAALVKGLCN 266
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
R L ++ ++ G S Y ++ C++ + A +L+ + + G P +
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
++ + CK ++DAL + + M R KP++ TY AL+ FC G+ +A++L+++M
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ PD+ +LI G C++ + A LL I D +YNA+ N +DG
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL---------WKGMER 606
+ L G PN +T +I+ L WK +E+
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEK 489
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 170/403 (42%), Gaps = 33/403 (8%)
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+N + C+ D+ + +L + G+ PD T+N+LI YC+ +++ A
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF----------------------- 333
L+ M R D+V+Y TL+ GLC+ G++ EA +LF
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAER 269
Query: 334 --------HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
RM G P +Y ++ C+E K +E++ +L EM G+ P TC
Sbjct: 270 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTA 329
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ Y KEGR+ AL ++ ++ G + Y+ L+ C + + A +LL ++ G
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P YN L+ C + A L M + TY ALI C GR+ +A
Sbjct: 390 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 449
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
SL D + G+ P++ LING C + A L DT +Y++
Sbjct: 450 SLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHL 509
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ + + L+ P+ + +IH L K ER +
Sbjct: 510 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLK--ERNY 550
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 190/413 (46%), Gaps = 23/413 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F+ R G + N L+N L K DQ +++ + GI PN TF
Sbjct: 408 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 467
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + CK+G D FLEK+ G PD TY++ I CK + M +
Sbjct: 468 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 527
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++V P V YT +++ L KE + + MV G +PD+V+Y T + AYC EG++ E
Sbjct: 528 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI- 422
++++L EM NG+ DT ++ G+ G+ A++++ ++ ++ Y L+
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647
Query: 423 ----VALCQDNRPFAAT------------SLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ L +D P L + + ++ ++P+ Y+ ++E +
Sbjct: 648 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 707
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L M + +I + Y AL+ CFC R +A L+ M++ G +P + L
Sbjct: 708 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 767
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTES--YNAVFNMFAEDG--DLSKLM 575
++G E +KA+ + F +++ Y + + + + + G D+S+ M
Sbjct: 768 LSGLICEGQTDKAKEI--FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 818
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 5/288 (1%)
Query: 313 YTTLMNGLCKEGKVREAHQLF-HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
+ +L+ L + A +LF H H +P +YN +I + C+ + + L M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ +G PD +T ++ GY + ++ A +L ++ G + Y LI LC+ R
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L + Q P + +Y L++ LC + + LL+ M + +PS Y A+
Sbjct: 240 DEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
+ C ++ EA ++ EM E G+ P C +IN YC E ++ A +L +
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ +YNA+ F +G + K M L + G P+ +T +I
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 403
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 129/318 (40%), Gaps = 26/318 (8%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++KP++ NY +++H L + + E+V S D+++ T AY
Sbjct: 529 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV--------SSGCNPDVVTYTTSMR-AY 579
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G + E+ + G ++ N L++G + D + ++M + PN
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639
Query: 241 HTFNILTHVFC-----------------KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
T+ IL K ++ V G + +++ F P+ TY++++
Sbjct: 640 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 699
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ + GR +A L +M ++ + YT L+ CK + +A L M+ G P
Sbjct: 700 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 759
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++SY L+ EG+ ++K + PD ++I+ G K+G + ++
Sbjct: 760 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 819
Query: 404 VELQRFGVSISRDIYDYL 421
+ L+R S Y L
Sbjct: 820 IMLERMNCRPSHQTYAML 837
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 234/544 (43%), Gaps = 109/544 (20%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR ++D V A +F + N + T Y +++ L +L ++ C
Sbjct: 53 LRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISC 112
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S D+F ++I+ Y +VGL ++ K F + + G QP++ N LL+ +L N
Sbjct: 113 --SEDLFINVIN-------TYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSEN 163
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY- 278
+Y M R G PN +T+NIL CKN VD L ++ +G +PD+V+Y
Sbjct: 164 RFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYT 223
Query: 279 -----------------------------NTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
N LI+ +C++ ++ + F L M + + P+
Sbjct: 224 TVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283
Query: 310 LVTY-----------------------------------TTLMNGLCKEGKVREAHQLFH 334
++TY T+LM G G+V EA +++
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
RM G P++V+YNTLI C GKM E+ S+ +M NG P+ T ++ G+ K G
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD---------- 444
L+ A + ++ G + +Y ++ LC+ + A SL+E++ D
Sbjct: 404 DLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFN 463
Query: 445 -------------------------GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
G P+++ YNE+++ L K + + +AL L EM ++
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++ +L TY + FC +G+ EA+ L+ +ML G+ PD+ L YCM+ V A
Sbjct: 524 GMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTA 583
Query: 540 EALL 543
LL
Sbjct: 584 IQLL 587
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 192/391 (49%), Gaps = 2/391 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++E F + ++ G P++++ + +++ L + ++ V+ +M G PN +TF
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + G V + ++ EEGF+P++V YNTLI C G++ +A + M R
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P++ TY L++G K G + A +++++M+ G P++V Y +++ C+ ++
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
SL+ +M + P+T T ++G GR+ A+NL +++++G S + Y+ ++ L
Sbjct: 445 SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
++NR A L+ + + G +L YN + C +AL L +M+ +KP
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY L +C G+ A+ L+D++ G +P+ L+ G C + V +A L
Sbjct: 565 ITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLD 624
Query: 545 FFAKKFQIYDTESYNA-VFNMFAEDGDLSKL 574
+ + ++NA V +F G L +
Sbjct: 625 KMLNEGICLNAATWNALVRGLFNSLGHLGPI 655
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 187/439 (42%), Gaps = 20/439 (4%)
Query: 102 CQSDSVSALTFFNWVKN----------DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
C+ D VS T + + + +P S Y +++ K +L +
Sbjct: 215 CEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQ 274
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+VE K +V + +IS + +G + + + K G P++ + L
Sbjct: 275 MVE--KGIDPNVITYSTVIS-------SLSGIGNVELALAVWAKMFVRGCSPNVYTFTSL 325
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+ G + + ++ M G PN +N L H C +G + + K+E G
Sbjct: 326 MKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGC 385
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
P++ TY LI + K G L A ++ M +P++V YT+++N LC+ +A
Sbjct: 386 SPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWS 445
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L +M P+ V++NT I C G+++ + +L +M G P+ T ++ G
Sbjct: 446 LIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLL 505
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
KE R+ AL LV E++ G+ ++ Y+ + C + A LL ++ G P
Sbjct: 506 KENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAI 565
Query: 452 IYNELMESLCKCDSVADALLLKDEM-VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L + C V A+ L D++ P ++ Y +L+ C EAV +D+
Sbjct: 566 TYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDK 625
Query: 511 MLESGMLPDSQICRVLING 529
ML G+ ++ L+ G
Sbjct: 626 MLNEGICLNAATWNALVRG 644
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 167/359 (46%), Gaps = 5/359 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ I+ + DVD V L++++ EG + +I++Y + G A ++ +
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P + Y L++ + E + + ++ M G P++ +YN L+ A CK ++
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL EM G PD + ++ K G++ A L + RF ++S +Y+ L
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSI---RFQPNVS--VYNAL 255
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C++ + LL ++ + G P++ Y+ ++ SL +V AL + +M R
Sbjct: 256 INGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGC 315
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ T+ +L+ + GR EA+++ + M E G P+ LI+G C + +A +
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS 375
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + +Y A+ + FA+ GDL E+ + + G PN + M++ L
Sbjct: 376 VSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVL 434
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 197/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCNW-- 178
+ T YC ++H L ++ K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLHTYCTMIHFLC-THQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYV 68
Query: 179 ------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + FR T + + +C +L L+KL W Y+E+
Sbjct: 69 FSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
F L M+ V PD+ TY+ L+NGLCKE K+ EA+ LF+ M+ +GL P+ V++ TLI
Sbjct: 189 QGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK GK+ + +M+ PD T ++ G K+G L A +L+ E++ G+
Sbjct: 249 DGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ +A L E + ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC A L+ EM G +P
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 145/329 (44%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G + DA +R+ + T ++ L K + +
Sbjct: 65 DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CKEG++ ++S+ + G+ P + ++ GY +
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI LC++++ A L + G VP+ +
Sbjct: 185 GDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTF 244
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V A+ +M+ + P L TY LI C G +A L+DEM
Sbjct: 245 TTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRM 304
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD LI+G C E D++ A L K+ D +Y A+ + ++G +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATD 364
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + L +G P+N T +I+ K
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEFCK 393
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 225/466 (48%), Gaps = 18/466 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++H L N+ A K L E+ ++ +V + LI K
Sbjct: 44 PDVYTYTAVIHALCVENRLHEARKFLEEMAN--RNLTPNVVTYTVLID-------GLCKG 94
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ K + P+ V+ N L++GL K + + + EEM G P+ T+
Sbjct: 95 GRVDEAVALLSK-MRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTY 153
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMY 302
L FCK+ D E++ GF PD+VTY+ LI CK+GRL +A L+ R++
Sbjct: 154 TTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ +P+ VTY +L++G C+ GK+ EA L RM G SPD+V+Y TL+ +CK ++
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ LL +M G+ PD T ++ G +E RL A++++ E++R S + Y+ ++
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ N+ A + + + P++ +N ++ LCK + ++A+ L +E R
Sbjct: 334 DGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCN 391
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLES-GMLPDSQICRVLINGYCMEKDVNKAEA 541
P + Y +I C + EA + +MLE G LP+S LI G C +++A
Sbjct: 392 PDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARG 451
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+ +K + + +YN + + F + EL ++ GF
Sbjct: 452 ----YIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 195/393 (49%), Gaps = 37/393 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KV + ++ K + GF P + + +++ L N + + + EEM + PN
Sbjct: 23 KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV 82
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEE-----------------------EGFD------ 272
T+ +L CK G VD+ L K+ + E +D
Sbjct: 83 TYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142
Query: 273 -----PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
PD+ TY TLI+ +CK + +DA ++ + R PD+VTY+ L++GLCKEG+++
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 328 EAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA LF RM+ G P+ V+YN+LI +C+ GKM E+ +LL M G PD T +
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ K RL A +L+ ++ R G++ + L+ LC++NR A +L + +
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN +++ C+ + + +A E +D P++ ++ +I C + RS EA+
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAME 380
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L++E PD + +I+G C EK V++A
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 193/404 (47%), Gaps = 16/404 (3%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
V+ L+ GL K+ ++Q +M G P+ +T+ + H C + + FLE+
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ P++VTY LI CK GR+++A L M R+ +P VTY +L++GLCK +
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA+ L MV+ G PDI +Y TLI +CK K ++ + +++ G PD T
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDI-YDYLIVALCQDNRPFAATSLLERIGQD 444
++ G KEGRL A++L + + G + + Y+ LI C+ + A +LLER+ +
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P + Y LM CK + DA L ++M + + P + T+ +L+ C R +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE------SY 558
V ++ EM P +++GYC + + A+KF + + + S+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE--------ARKFMLEEMDCPPNVVSF 362
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + + S+ MEL + R P+ + +I L +
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCR 406
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D VTY +LI CK RL A M + PD+ TYT +++ LC E ++ EA +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M +R L+P++V+Y LI CK G++ E+ +LL +M + P T ++ G K
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
R A +L+ E+ G Y LI C+ + A + E++ G+ P + Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 454 NELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L++ LCK + +A+ L M+ + P+ TY +LI FC +G+ EA++L++ M
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E+G PD L+NG+C ++ A LL +K D ++ ++ + + LS
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 573 KLMELQKRFLRLGFAPNNLT 592
+ + R +P T
Sbjct: 309 DAVHILGEMRRKSCSPTVYT 328
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
S D V+Y +LI CK +++++ L +M+ G +PD +T ++ E RL A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ E+ ++ + Y LI LC+ R A +LL ++ + VP+ YN L+ LC
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLC 126
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + ++A L +EMV P + TY LI FC +S +A+ + ++++ G PD
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQ-IYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LI+G C E + +A L G K + +T +YN++ + F G + + M L +R
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
G +P+ +T +++ K
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCK 268
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 204/434 (47%), Gaps = 8/434 (1%)
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
E CN ++ L E+ + F+ D ++ S N LL L ++ Q+++EM
Sbjct: 236 EACNAVLSRLPL-DEAIELFQGLPD----KNVCSYNILLKVLCGAGRVEDARQLFDEMAS 290
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
P+ T+ IL H +C G+++ L+ + G +P+ Y ++++ C KGR++D
Sbjct: 291 P---PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSD 347
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A + M V+ D YTT+++G C +G + A + F M +GL+ D V+Y TLI
Sbjct: 348 ALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLIN 407
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C+ G+++E++ +L EM+ + D T ++V GY K G++ A + + + GV+
Sbjct: 408 GLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAP 467
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y L LC+ AA LL + G + YN L+ LCK + A+
Sbjct: 468 NVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTM 527
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+M +KP + TY LI C G A L+ EML++G+ P VL+NG+CM
Sbjct: 528 ADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMS 587
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
V + LL + +K + +YN++ + ++ E+ K PN T
Sbjct: 588 GRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTY 647
Query: 594 KYMIHSLWKGMERK 607
+I K K
Sbjct: 648 NILIKGHCKARSMK 661
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 211/453 (46%), Gaps = 12/453 (2%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+++ P Y +++H + A+K+L ++V + + V+ +++ C+
Sbjct: 286 DEMASPPDVVTYGILIHGYCALGELENAVKLLDDMV--ARGVEPNATVYTSVVALL--CD 341
Query: 178 WAYVKVGL-IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
V L + E + LD +++S G + + ++EM R G+
Sbjct: 342 KGRVSDALTVVEDMVHHKVILDEAVYTTVLS------GFCNKGDLVSARRWFDEMQRKGL 395
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
+ T+ L + C+ G++ + L+++ D D VTY L+ YCK+G++ +AF
Sbjct: 396 ATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQ 455
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M +R V P++VTYT L +GLCK+G V+ A++L H M ++GL + +YN+LI C
Sbjct: 456 VHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 515
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + ++ + +M G+ PD +T ++ K G L A +L+ E+ G+ +
Sbjct: 516 KAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIV 575
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ L+ C R LLE + + P+ YN LM+ C +++ + M
Sbjct: 576 TYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
RN++P+ +TY LI C EA +EM+E G + LI +K
Sbjct: 636 CSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKF 695
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNM-FAED 568
+A L K+ + + YN + F ED
Sbjct: 696 VEARKLFHDMRKEGFTAEPDVYNFYIDFNFNED 728
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 187/403 (46%), Gaps = 3/403 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +G + + K + G +P+ ++ L + V E+M +
Sbjct: 303 GYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVIL 362
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + + FC GD+ + ++++ +G D VTY TLI+ C+ G L +A +
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R + D VTYT L++G CK GK+ EA Q+ + MV RG++P++V+Y L CK+
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G +Q + LL+EM G+ + T ++ G K G L A+ + ++ G+ Y
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI ALC+ A LL+ + +G P++ YN LM C V L + M++
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLE 602
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+NI P+ +TY +L+ +C + M + P+ +LI G+C + + +
Sbjct: 603 KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKE 662
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
A+ +K SY+A+ + + K +E +K F
Sbjct: 663 AQYFHNEMIEKGFRLTASSYSALIRLLNKK---KKFVEARKLF 702
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 175/379 (46%), Gaps = 10/379 (2%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D VSA +F+ ++ + Y +++ L + A K+L E++
Sbjct: 377 KGDLVSARRWFDEMQRK-GLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA------RR 429
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+DV + + D Y K G + E+F+ + G P++V+ L +GL K +
Sbjct: 430 LDVDEVTYTVLVD---GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
++ EM G+ N T+N L + CK G +D+ + ++ G PD+ TY TLI
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ CK G L+ A L + M + P +VTY LMNG C G+V +L M+ + +
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P+ +YN+L+ YC M+ + + M + P+ T I+++G+ K + A
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
E+ G ++ Y LI L + + A L + ++G+ ++YN ++
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFN 726
Query: 463 CDSVADALLLKDEMVDRNI 481
D++ L L DE+V+ +I
Sbjct: 727 EDNLEATLALCDELVEASI 745
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 189/402 (47%), Gaps = 6/402 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +L L + ++ +M R PN T+N + FC G V + ++ E
Sbjct: 118 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 173
Query: 269 EG-FDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G P+ TY T+IS +CK GR+++A ++ ++ + V P+ V Y L+ G C +GK+
Sbjct: 174 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 233
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A RMV RG++ + +YN L+ A +G+ E+ L+ EM G G+ PD FT I+
Sbjct: 234 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 293
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL + + R GV + Y LI AL + + L + + G
Sbjct: 294 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 353
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L +YN L+ S ++ A + EM + I P TY L+ C +GR EA
Sbjct: 354 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 413
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+DEM E G+ PD LI+GY M+ DV A + K +YNA+
Sbjct: 414 LIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 473
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
++G + K + G P++ T +I L ER
Sbjct: 474 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERAI 515
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 175/337 (51%), Gaps = 1/337 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDK 258
G P+ + +++G K+ +D+ +V++EM G + P +N L +C G +D
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ +++ E G + TYN L+ + GR +A+ L M + + PD+ TY L+N
Sbjct: 236 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 295
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CKEG V++A ++F M RG+ +V+Y LI+A K+G++QE+ L E + GI P
Sbjct: 296 GHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRP 355
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++ + G + A ++ E+++ ++ Y+ L+ LC R A L+
Sbjct: 356 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 415
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P L YN L+ V DAL +++EM+++ P+L TY ALI C
Sbjct: 416 DEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 475
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G+ +A +++ EM+E+G+ PD LI G E +
Sbjct: 476 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 9/321 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + E+KP + Y ++ K A+ +VE + +V +
Sbjct: 200 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNL 257
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ A G E+++ + G P + + N L+NG K + + +++
Sbjct: 258 LV-------HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 310
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M R G+ T+ L + K G V + + ++ G PDLV YN LI+S+
Sbjct: 311 ENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 370
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF + M ++ + PD VTY TLM GLC G+V EA +L M RG+ PD+V+Y
Sbjct: 371 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTY 430
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NTLI Y +G ++++ + EMM G P T ++QG K G+ A N+V E+
Sbjct: 431 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 490
Query: 409 FGVSISRDIYDYLIVALCQDN 429
G++ Y LI L ++
Sbjct: 491 NGITPDDSTYISLIEGLTTED 511
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL ++ I P Y ++ + A+K+ E++ + P +V ++
Sbjct: 163 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV-MYN 221
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI Y G + + + ++ G ++ + N L++ L + +++
Sbjct: 222 ALIG-------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 274
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEMG G+ P+ T+NIL + CK G+V K E + G +VTY LI + K
Sbjct: 275 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSK 334
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
KG++ + L+ RR + PDLV Y L+N G + A ++ M + ++PD V+
Sbjct: 335 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 394
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTL+ C G++ E++ L+ EM GI PD T ++ GY +G + AL + E+
Sbjct: 395 YNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 454
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + + Y+ LI LC++ + A ++++ + ++G P Y L+E L D A
Sbjct: 455 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 514
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T+N ++ C G+ A L R M R P+ VTY T++ G C G+V+ A +
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 170
Query: 336 MVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKE 393
M R G++P+ +Y T+I +CK G++ E+ + EM+ G + P+ ++ GY +
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+L +AL + GV+++ Y+ L+ AL D R A L+E +G G P + Y
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ CK +V AL + + M R ++ ++ TY ALI G+ E L DE +
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD + LIN + ++++A ++G KK D +YN + G + +
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+L G P+ +T +I
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLI 434
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N ++ LC A AL E++ + +P+ TY +I FC GR A+ +M EM
Sbjct: 117 FNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 172
Query: 513 E-SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGD 570
E G+ P+ +I+G+C V++A + K ++ + YNA+ + + G
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + + R + G A T ++H+L+
Sbjct: 233 LDTALLYRDRMVERGVAMTVATYNLLVHALF 263
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 195/393 (49%), Gaps = 37/393 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KV + ++ K + GF P + + +++ L N + + + EEM + PN
Sbjct: 23 KVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVV 82
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEE-----------------------EGFD------ 272
T+ +L CK G VD+ L K+ + E +D
Sbjct: 83 TYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMV 142
Query: 273 -----PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
PD+ TY TLI+ +CK + +DA ++ + R PD+VTY+ L++GLCKEG+++
Sbjct: 143 YSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK 202
Query: 328 EAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA LF RM+ G P+ V+YN+LI +C+ GKM E+ +LL M G PD T +
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ K RL A +L+ ++ R G++ + L+ LC++NR A +L + +
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN +++ C+ + + +A E +D P++ ++ +I C + RS EA+
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAME 380
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L++E PD + +I+G C EK V++A
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 206/394 (52%), Gaps = 17/394 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT+ Y ++ L + S A +L E+V C + + LI+ + K
Sbjct: 113 PTAVTYNSLISGLCKAERASEAYDLLEEMV--YSGCIPDIFTYTTLIT-------GFCKS 163
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PNTHT 242
++ + F + + GF+P +V+ + L++GL K + + ++ M + G C PNT T
Sbjct: 164 KKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT 223
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L FC+ G +D+ LE++ E G PD+VTY TL++ +CK RL+DA+ L M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R+ + PD+VT+T+LM+GLC+E ++ +A + M + SP + +YNT++ YC+ +++
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ + E M P+ + I+++G K R A+ LV E +R + +Y +I
Sbjct: 344 EARKFMLEEM--DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVI 401
Query: 423 VALCQDNRPFAATSLLERIGQD-GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
LC++ + A + ++ ++ G +P+ Y+ L+ LC A L +++
Sbjct: 402 DGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCN----AGMLDRARGYIEKGC 457
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
P++ TY LI F R +A L+D+M++ G
Sbjct: 458 VPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 193/404 (47%), Gaps = 16/404 (3%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
V+ L+ GL K+ ++Q +M G P+ +T+ + H C + + FLE+
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ P++VTY LI CK GR+++A L M R+ +P VTY +L++GLCK +
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA+ L MV+ G PDI +Y TLI +CK K ++ + +++ G PD T
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDI-YDYLIVALCQDNRPFAATSLLERIGQD 444
++ G KEGRL A++L + + G + + Y+ LI C+ + A +LLER+ +
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P + Y LM CK + DA L ++M + + P + T+ +L+ C R +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE------SY 558
V ++ EM P +++GYC + + A+KF + + + S+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEE--------ARKFMLEEMDCPPNVVSF 362
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + + S+ MEL + R P+ + +I L +
Sbjct: 363 NIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCR 406
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D VTY +LI CK RL A M + PD+ TYT +++ LC E ++ EA +
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M +R L+P++V+Y LI CK G++ E+ +LL +M + P T ++ G K
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
R A +L+ E+ G Y LI C+ + A + E++ G+ P + Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 454 NELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ L++ LCK + +A+ L M+ + P+ TY +LI FC +G+ EA++L++ M
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E+G PD L+NG+C ++ A LL +K D ++ ++ + + LS
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 573 KLMELQKRFLRLGFAPNNLT 592
+ + R +P T
Sbjct: 309 DAVHILGEMRRKSCSPTVYT 328
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 2/262 (0%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
S D V+Y +LI CK +++++ L +M+ G +PD +T ++ E RL A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ E+ ++ + Y LI LC+ R A +LL ++ + VP+ YN L+ LC
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLC 126
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + ++A L +EMV P + TY LI FC +S +A+ + ++++ G PD
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQ-IYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LI+G C E + +A L G K + +T +YN++ + F G + + M L +R
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
G +P+ +T +++ K
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCK 268
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 197/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YE+
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P V++NTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ A++LF+ M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G LM EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 148/271 (54%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G I+ + F G +P+ VS N L+NG ++L +D+ +++ M G+ P+
Sbjct: 146 FCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPD 205
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+T+++L + CK +D N ++ + G P+ VT+ TLI +CK GR++ A +Y+
Sbjct: 206 VYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD V+Y TLI CKEG
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEG 325
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + L++ + +DGYVPS+
Sbjct: 386 MIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 157/380 (41%), Gaps = 36/380 (9%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGQGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM+ CKEG+++ A +
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSV 158
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + GL P VS+NTL+ Y + G + E L M +G+ PD +T +++ G K
Sbjct: 159 FDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCK 218
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + +++ P L
Sbjct: 219 ESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 278
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM + +KP TY LI C G A M+
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMI 338
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + D LI+G C E AE +L + +Y + N F + GD+
Sbjct: 339 KENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVW 398
Query: 573 KLMELQKRFLRLGFAPNNLT 592
+L K R G+ P+ +T
Sbjct: 399 TGSKLMKEMQRDGYVPSVVT 418
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K +A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 185/371 (49%), Gaps = 15/371 (4%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK G + K ++ L G P++V+ L+ G K + + + + P+
Sbjct: 38 VKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDV 97
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+ FN L H K+G+ D+ E +E +PD+ TYNT+IS CK G L A L
Sbjct: 98 YIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEE 157
Query: 301 MYRRN--VLPDLVTYTTLMN-GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M RR PD+VTY TL+N G+CK+G V EA ++ M G +PD+++YN++I A C
Sbjct: 158 MIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCV 217
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ E+ +L M PD T ++ G+ K G L AL ++ E+ R +
Sbjct: 218 AGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 274
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA-LLLKD-- 474
Y L+ LC+ + A LLE I + GY+P + Y L++ LCK + +A L+K+
Sbjct: 275 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 334
Query: 475 ------EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
EMV N+ P L TY ++ G +AVSL+ +++ G +PD LI+
Sbjct: 335 AREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLID 394
Query: 529 GYCMEKDVNKA 539
G C V +A
Sbjct: 395 GLCKANRVREA 405
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 206/421 (48%), Gaps = 15/421 (3%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTHTFNI 245
++ K F P I + N +++GL K +++ ++ EEM R G P+ T+N
Sbjct: 115 QAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNT 174
Query: 246 LTHV-FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L + CK+GDV++ L+ ++ G PD++TYN++I + C GR+ +A + + M
Sbjct: 175 LINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM--- 231
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ PDLVT+ TL++G CK G + A ++ M + PD+++Y L+ C+ G++Q +
Sbjct: 232 SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVA 291
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-------QRFGVSISRDI 417
LL E++ G PD +V G K G + A LV E+ + +++ +
Sbjct: 292 FYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPL 351
Query: 418 YDYLIV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+ Y IV L +D A SL+ + GYVP + YN L++ LCK + V +A L DE
Sbjct: 352 FTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADE 411
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M P+ T +++ C +GR +A SL+ EM P+ + LI+G C
Sbjct: 412 MASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDR 471
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
++ A +L + D +Y + G +++ M + + GF P+ T K
Sbjct: 472 MDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKT 531
Query: 596 M 596
+
Sbjct: 532 L 532
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 190/416 (45%), Gaps = 50/416 (12%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G++ + S N LL+ L+K + +VY+++ G PN TF IL CK G +
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
FL ++E PD+ +N LI K G + A L+ M V PD+ TY T+++G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141
Query: 320 LCKEGKVREAHQLFHRMVHRG--LSPDIVSYNTLIFA-YCKEGKMQESKSLLYEMMGNGI 376
LCK G + +A +L M+ RG +PDIV+YNTLI A CK+G ++E+ +L M G
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD T Y+ +I ALC R A
Sbjct: 202 APDVIT-----------------------------------YNSIIHALCVAGRVVEAAE 226
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+L+ + P L +N L++ CK + AL + +EM NI P + TY L+ C
Sbjct: 227 ILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 283
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+G+ A L++E++ G +PD L++G C ++ +A L+ + + + +
Sbjct: 284 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMV 343
Query: 557 S---------YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
S YN V +DG +SK + L + G+ P+ +T +I L K
Sbjct: 344 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 399
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 21/345 (6%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y I+H L + A ++L + C + F L+ + K
Sbjct: 203 PDVITYNSIIHALCVAGRVVEAAEILKTM-----SCSPDLVTFNTLLD-------GFCKA 250
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ + + + P +++ L+NGL ++ + + + EE+ R G P+ +
Sbjct: 251 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 310
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEE---------GFDPDLVTYNTLISSYCKKGRLNDA 294
L CK+G++++ + ++++ P L TYN ++ K G ++ A
Sbjct: 311 TSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 370
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L + R +PD+VTY TL++GLCK +VREA L M G P+ V+ +++F
Sbjct: 371 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFG 430
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
C+ G++ ++ SL+ EM P+ ++ G K R+ A ++ ++ GV++
Sbjct: 431 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALD 490
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
Y LIV++ R A ++ + + G++P L E+
Sbjct: 491 DFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEA 535
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 141/340 (41%), Gaps = 37/340 (10%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E++G+ D+ +YN L+ K G +Y+ + P+LVT+ L+ G CK G+
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A + + ++PD+ +N LI K+G ++ L M + + PD FT +
Sbjct: 79 TRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTV 138
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G K G L A L+ E+ + R G+
Sbjct: 139 ISGLCKSGNLEKARELLEEM-------------------------------IRRGGKSA- 166
Query: 447 VPSLEIYNELMES-LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P + YN L+ + +CK V +AL + D M P + TY ++I C GR EA
Sbjct: 167 -PDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAA 225
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++ M S PD L++G+C + +A +L ++ + D +Y + N
Sbjct: 226 EILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
G + L + +R G+ P+ + ++ L K E
Sbjct: 283 CRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE 322
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 204/401 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N +++G K +++ +++EM + GI P+ T++ + H CK +DK F
Sbjct: 217 PDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ +G P+ TYN LI Y G+ +A +++ M R+++LPD+VT+ LM LCK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SYN ++ Y +G + + L M+G+GI P T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICT 396
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV + Y +I ALC+ + A ++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y+ L++ C S+ A L E+++ + + + ++I C +GR
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVM 516
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ P + + +L++GYC+ + KA + + Y +
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 176/342 (51%), Gaps = 2/342 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+F R+ ++ G P+ + N L+ G + +V++EM R I P+ TFN+L
Sbjct: 274 EAF--LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK G + + + + +G +PD+ +YN +++ Y KG L D L+ +M +
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P + T+ L+ G + +A +F+ M G+ P++++Y T+I A C+ GKM ++
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G+ PD + ++QG+ G LL A L+ E+ G+ + ++ +I LC+
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A ++ + G P+ +Y+ LM+ C + AL + D MV I+P+
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
Y L+ +C IGR E +SL EML+ G+ P + + ++I+G
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 195/404 (48%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ + N L FC+ D+ ++ L + E G PD+ +Y+ L+ S C
Sbjct: 134 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + PD+V Y T+++G KEG V +A LF MV RG+ PD
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V+Y++++ A CK M ++++ L +M+ G+ P+ +T ++ GY G+ A+ +
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Query: 405 ELQR-------------------FG-VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R +G + +RD++D + + Q+ F+
Sbjct: 314 EMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYNIMLNGYATK 372
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P + +N L+++ C + A+++ +EM D +KP++ TY
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTY 432
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I C IG+ +A+ ++M++ G+ PD LI G+C + KA+ L+
Sbjct: 433 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D ++++ N + L ++M+ Q F + +G P
Sbjct: 493 NGMHLDIVLFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPT 533
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 179/366 (48%), Gaps = 2/366 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G++ ++ F + D G +P++++ ++ L ++ +D + + +M G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + ++ L FC +G + K + +I G D+V ++++I++ CK GR+ DA ++
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + P V Y+ LM+G C GK+ +A ++F MV G+ P+ V Y TL+ YCK
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E SL EM+ GI P T II+ G + GR + A E+ G+++++ Y
Sbjct: 583 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 642
Query: 419 DYLIVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L + NR F A L + + + N ++ + + V +A L +
Sbjct: 643 SIVLRGLFK-NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 701
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P + TY +I G EA + M +G PDS++ ++ + ++
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761
Query: 538 KAEALL 543
+A A L
Sbjct: 762 RAGAYL 767
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 174/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S N +LNG C+ +++ M GI P
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVIC 395
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G P+++TY T+I++ C+ G+++DA + M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V PD +V +++++N LCK G+V
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL P V Y+ L+ YC GKM+++ + M+ GI P+ +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y+ +I L + R A + + G
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ Y+ ++ L K +A+ L E+ N+K + T +I R EA
Sbjct: 636 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 695
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + SG++P ++I E V +AE
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 140/335 (41%), Gaps = 3/335 (0%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + D++ L+ G C+ + EA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SY+ L+ + C +GK ++ LL M G PD ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+ Y ++ ALC+ A + L ++ G +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P+ YN L+ +A+ + EM ++I P + T+ L+ C G+ EA +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D M G PD +++NGY + + L ++N + +A
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L K M + G PN LT +I +L +
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 170/402 (42%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FN ++ D +KP Y ++ L K AM+ ++++ + +
Sbjct: 413 AMIIFNEMR-DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMID--QGVAPDKYAYHC 469
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI CT G + ++ + + ++ G IV + ++N L KL +
Sbjct: 470 LIQGFCTH---------GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P +++L +C G ++K + + G +P+ V Y TL++ YC
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M ++ + P + Y +++GL + G+ A FH M G++ +
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y+ ++ K E+ L E+ + D T ++ G + R+ A +L +
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 700
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R G+ Y +I L ++ A + + G P + N ++ L K + +
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 144/337 (42%), Gaps = 18/337 (5%)
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR----RNVLPDLVTYT 314
+NGFL I P S+ C+ G R R R + P TY
Sbjct: 67 LNGFLAAIARA---PS--------SAACRSGPALAVALFNRAASRAQGPRVLSPTSHTYA 115
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS-LLYEMMG 373
LM+ + + A F +++ GL DI+ N L+ +C+ + E+ LL+
Sbjct: 116 ILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPE 175
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRP 431
G PD F+ I+++ +G+ A +L+ + G S D+ Y+ +I ++
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDV 235
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L + + Q G P Y+ ++ +LCK ++ A +MV++ + P+ TY L
Sbjct: 236 NKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I + G+ EAV + EM +LPD +L+ C + +A + A K Q
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQ 355
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
D SYN + N +A G L + +L L G AP
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 187/373 (50%), Gaps = 8/373 (2%)
Query: 184 GLIRE------SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
GL+RE ++ F + LD G P +V+ N +++ L K +D+ V M + G
Sbjct: 211 GLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAM 270
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T N L H +C +G + G +++ +G +PD+ TYNTL+ CK GR +A +
Sbjct: 271 PNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKI 330
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M +R P+ TY TL++G EG + + H L MV G+ PD +N LI Y K
Sbjct: 331 FDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTK 390
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
GK+ ++ L +M G+ PDT T I++ G++ A+ L G++ +
Sbjct: 391 HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVV 450
Query: 418 YDYLIVALCQDNRPFAATSL-LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ LI LC ++ A L +E IG+ G P+ +N L+ LCK VA A + D M
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGR-GICPNNIFFNTLLNHLCKEGMVARAKNIFDLM 509
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V +++ + TY LI +C G+ EA L++ M+ G+ P+ +INGYC +
Sbjct: 510 VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRI 569
Query: 537 NKAEALLGFFAKK 549
A +L A K
Sbjct: 570 EDAFSLFRQMASK 582
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 10/427 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G ++ F++ G +P + + N L+ L K + ++++ M + G P
Sbjct: 282 GYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ T+ L H + G + K++ L+ + G PD +N LI +Y K G+++DA L+
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLF 401
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ + PD VTY +M+ LC GKV +A F R++ GL+PD V + LI C
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR 461
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI- 417
K +++ L EM+G GI P+ ++ KEG + A N+ + R V + RD+
Sbjct: 462 DKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVR--VDVQRDVI 519
Query: 418 -YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + A LLE + DG P+ YN ++ CK + DA L +M
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQM 579
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + P + TY ++ R+ A L M++SG+ D +++ G C
Sbjct: 580 ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN--- 636
Query: 537 NKAEALLGFFAKKFQI---YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
N + L F + I + ++N + + + G + +L L G PN +T
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696
Query: 594 KYMIHSL 600
M+ SL
Sbjct: 697 WLMMKSL 703
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 201/453 (44%), Gaps = 41/453 (9%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-----GRIGICPNTHTFNIL 246
R+ +G P++ S LL GL N Q + M R G P+ ++N +
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208
Query: 247 THVFCKNG-DVDKVNGFLEKIEEEGFDPDLVTYNTLISS--------------------- 284
+ + G +D +++ ++G PD+VTYN++IS+
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 285 --------------YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
YC G+ NDA +++ M R V PD+ TY TLM LCK G+ EA
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++F MV RG P+ +Y TL+ Y EG + + LL M+ NGI PD + I++ Y
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G++ A+ L +++R G++ Y ++ ALC + A + R+ +G P
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
++ L+ LC D A L EM+ R I P+ + L+ C G A ++ D
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDL 508
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ + D LI+GYC+ V++A LL + +YN + N + ++G
Sbjct: 509 MVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGR 568
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ L ++ G P +T ++ L++
Sbjct: 569 IEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 179/377 (47%), Gaps = 7/377 (1%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
+ R + PN T++++ + G +D L ++ G+ + +T++ L+ + C K R
Sbjct: 82 VARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKR 141
Query: 291 LNDAFYL-YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-----HRGLSPD 344
++A + R M P++ +YT L+ GLC E + ++A L H M+ G PD
Sbjct: 142 TSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPD 201
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLY-EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+VSYNT+I +EG+ ++ L+ +M+ G+ PD T I+ K + A ++
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
V + + G +R ++ L+ C +P A + +R+ +DG P + YN LM LCK
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN 321
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+A + D MV R KP+ +TY L+ + G + L+D M+ +G+ PD I
Sbjct: 322 GRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIF 381
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+LI Y V+ A L ++ DT +Y V + G + M R +
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS 441
Query: 584 LGFAPNNLTCKYMIHSL 600
G P+ + + +IH L
Sbjct: 442 EGLTPDAVVFRNLIHGL 458
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 181/408 (44%), Gaps = 60/408 (14%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWA 179
+ P + Y +++ L K AM L+ P +V VF++LI C D W
Sbjct: 409 LNPDTVTYGIVMDALCMVGKVDDAMAQFGRLIS-EGLTPDAV-VFRNLIHGLCARD-KW- 464
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
++ + + + G P+ + N LLN L K + + +++ M R+ + +
Sbjct: 465 -------DKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L +C +G VD+ LE + +G P+ VTYNT+I+ YCK GR+ DAF L+R
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC--- 356
M + V P +VTY+T++ GL + + A +L+ M+ G+ DI +YN ++ C
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637
Query: 357 --------------------------------KEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K G+ E+K L ++ G+ P+ T
Sbjct: 638 CTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 697
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++++ ++G L +L + L++ G + + + + L+ L Q A L +I ++
Sbjct: 698 LMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDEN 757
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+ SLE ESL LL+ D++I YR ++
Sbjct: 758 NF--SLEASTA--ESLV--------LLVSSGKYDQHINAIPEKYRPVV 793
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 149/352 (42%), Gaps = 45/352 (12%)
Query: 294 AFYLYRIMY---RRNVLPDLVTYTT----------------------------------- 315
A L+R M R V P+L+TY+
Sbjct: 72 AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131
Query: 316 LMNGLCKEGKVREAHQL-FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM-- 372
L+ LC + + EA + RM G +P++ SY L+ C E + Q++ LL+ MM
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191
Query: 373 ---GNGIYPDTFTCQIIVQGYGKEGRLL-SALNLVVELQRFGVSISRDIYDYLIVALCQD 428
G PD + ++ G +EGR L +A +L ++ G+S Y+ +I AL +
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A +L R+ ++G +P+ +N L+ C DA+ + M ++P + TY
Sbjct: 252 RAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTY 311
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ C GRS EA + D M++ G P+S L++GY E + K LL +
Sbjct: 312 NTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVR 371
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D +N + + + G + M L + R G P+ +T ++ +L
Sbjct: 372 NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 132/321 (41%), Gaps = 54/321 (16%)
Query: 328 EAHQLFHRMVHR-------------------------------------GLSPDIVSYNT 350
AH F ++HR + P++++Y+
Sbjct: 37 HAHHAFDELLHRPTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSV 96
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I + G + + + L ++ +G + T +++ + R A++ + L+R
Sbjct: 97 VIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMD--IALRRMP 154
Query: 411 V-SISRDIYDYLIV--ALCQDNRPFAATSLLERI-----GQDGYVPSLEIYNELMESLCK 462
V + +++ Y I+ LC +NR A LL + + GY P + YN ++ L +
Sbjct: 155 VLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLR 214
Query: 463 CDSVAD-ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
D A L D+M+D+ + P + TY ++I +A ++ M+++G +P+
Sbjct: 215 EGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRI 274
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
L++GYC N A + + D +YN + ++G + ME +K F
Sbjct: 275 THNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNG---RSMEARKIF 331
Query: 582 ---LRLGFAPNNLTCKYMIHS 599
++ G PN+ T ++H
Sbjct: 332 DSMVKRGHKPNSATYGTLLHG 352
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 192/391 (49%), Gaps = 4/391 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++ G +R++ + + G P++V+ N +++GLLK + + EM +G+ P
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + +CK G++ + L + G P ++TYNTLI YC+ G L +A L
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD+ TYT LMNG K + A + F M+ +GL PD +YNT I A
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTL 496
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ L MM GIYPDT T +I+ G K G L A L ++ G+ Y
Sbjct: 497 SSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITY 556
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI A C+ A LL + DG PS+ Y L+ + C+ ++ A +M+D
Sbjct: 557 TCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLD 616
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I+P+ TY LI C GR+ A EMLE G+ P+ +LI+G C E N
Sbjct: 617 VGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREG--NW 674
Query: 539 AEALLGFFA--KKFQIYDTESYNAVFNMFAE 567
A+A+ +F + D ++NA+F F E
Sbjct: 675 ADAIRLYFEMHQNGIPPDYCTHNALFKGFDE 705
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 176/374 (47%), Gaps = 9/374 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I PT Y I+H L + A E+ ++ + D+I+ N Y
Sbjct: 339 IMPTVVTYNAIIHGLLKCEQAEAAQVKFAEM--------RAMGLLPDVITYNSLLN-RYC 389
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E+ G P++++ N L++G +L + + ++ EEM G P+
Sbjct: 390 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVC 449
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL + K ++ F +++ +G PD YNT I + AF L +M
Sbjct: 450 TYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVM 509
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + PD VTY +++GLCK G +++A +L +MV GL PD ++Y LI A+C+ G +
Sbjct: 510 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLL 569
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ LL M+ +G+ P T I+V + G L SA ++ G+ + Y+ L
Sbjct: 570 REARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 629
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC R A + + G P+ Y L++ C+ + ADA+ L EM I
Sbjct: 630 IHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 689
Query: 482 KPSLSTYRALICCF 495
P T+ AL F
Sbjct: 690 PPDYCTHNALFKGF 703
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 186/412 (45%), Gaps = 3/412 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
FR G P + CN +L L D VY EM ++ + P T+N L
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246
Query: 250 FCKNGDVDKVNGFLEKIEEEG--FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
F K G D+ + L+++E +G F + VT+N +IS ++G L +A L M R +
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKK 305
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
TY L+ L + G VR+A L M + G+ P +V+YN +I K + + ++
Sbjct: 306 ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVK 365
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM G+ PD T ++ Y K G L AL L+ +L+R G++ + Y+ LI C+
Sbjct: 366 FAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR 425
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A L E + + G P + Y LM K ++A A DEM+ + ++P
Sbjct: 426 LGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFA 485
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y IC + + A L + M+ G+ PD+ V+I+G C ++ A+ L
Sbjct: 486 YNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMV 545
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
D +Y + + E G L + +L + G P+ +T ++H+
Sbjct: 546 SDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHT 597
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 182/406 (44%), Gaps = 36/406 (8%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+T GF + V+ N +++ L + ++ ++ + M R+ ++ T+N L + G
Sbjct: 264 ETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERG 322
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V K ++E EG P +VTYN +I K + A + M +LPD++TY
Sbjct: 323 FVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYN 382
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+L+N CK G ++EA L + GL+P +++YNTLI YC+ G + E++ L EM+
Sbjct: 383 SLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQ 442
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G +PD T I++ G K L A E+ G+ Y+ I A + A
Sbjct: 443 GCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMA 502
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L E + G P YN +++ LCK ++ DA LK +MV ++P TY LI
Sbjct: 503 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHA 562
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G EA L++ M+ G+ P +L++ C ++ A G+F
Sbjct: 563 HCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSA---YGWF-------- 611
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ L +G PN +T +IH+L
Sbjct: 612 ------------------------RKMLDVGIEPNEITYNVLIHAL 633
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 9/163 (5%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G P + N ++ L D + EM+ ++P++ TY L+ F GR EA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256
Query: 505 VSLMDEMLESG---MLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYN 559
L+ EM G L D V+I+ E + A L+ +KK + +YN
Sbjct: 257 SMLLKEMETQGGGFSLNDVTF-NVVISFLAREGHLENAVKLVDSMRLSKKASSF---TYN 312
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ E G + K LQ G P +T +IH L K
Sbjct: 313 PLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLK 355
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 16/493 (3%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
+ N K+ +E P Y +++ L NN+ A K+L E+ K C + LIS
Sbjct: 169 YSNMKKDGME--PNVFTYNILLKALCKNNRVDGAHKLLVEMSS--KGCDPDEVSYTTLIS 224
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ K+G ++E+ + L + F PS+ N L+NG+ K ++ +Q+ +EM
Sbjct: 225 -------SLCKLGKVKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEM 272
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
GI PN ++ + + G+V+ L K+ G P+L T+ +LI + KG
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A + M R V+P++V Y LM+GLC + + +A +F++M G P++ +Y+ L
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I Y K G + + + M+ +G +P+ +V + A L+ +Q
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC 452
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ ++ I LC R A + +++G G P+ YNEL++SL K +A
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L +M R I+ +L TY +I +C G GEA+ L+ +M+ G PD+ ++I+ YC
Sbjct: 513 LVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYC 572
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ VN A L+ + D +Y ++ + + + + +R L G +PN
Sbjct: 573 KQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVA 632
Query: 592 TCKYMIHSLWKGM 604
T ++ L+ M
Sbjct: 633 TWNVLVRHLFSNM 645
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 237/538 (44%), Gaps = 49/538 (9%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
L+ + D AL +F + N K T Y +++ LA + +L ++ C
Sbjct: 50 LKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISC 109
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S D+F +I +Y + G ++ KTF + D +P++ N +L+ LL N
Sbjct: 110 --SEDLFISVIG-------SYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDEN 160
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+Y M + G+ PN T+NIL CKN VD + L ++ +G DPD V+Y
Sbjct: 161 RFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYT 220
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TLISS CK G++ +A L + P + Y L+NG+CKE EA QL M+++
Sbjct: 221 TLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNK 275
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ P+++SY T+I A G ++ S ++L +M G P+ T +++G+ +G A
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L+ + R GV + Y+ L+ LC A S+ ++ +G P++ Y+ L++
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Query: 460 -----------------------------------LCKCDSVADALLLKDEMVDRNIKPS 484
LC+ A L + M N P+
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
T+ I CG GR A+ + D+M SG P++ L++ ++ +A L+
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +YN + + G L + +EL + + G P+ +T +I + K
Sbjct: 516 DMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 179/389 (46%), Gaps = 11/389 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P +Y I++ L+ ++ +L ++ + C ++ F LI +
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKM--FARGCSPNLHTFTSLIK-------GFF 327
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G E+ + + + G P++V+ N L++GL + V+ +M G CPN
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + K GD+D + + G P++V Y ++ C+ N A+ L M
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N P+ VT+ T + GLC G+V A ++F +M + G P+ +YN L+ + K+ +
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L+ +M GI + T I+ GY G L AL L+ ++ G + +
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A C+ + A L++R+ + P + Y L+ +C V +A++ M+ I
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627
Query: 482 KPSLSTYRALI-CCFCGIGRSGEAVSLMD 509
P+++T+ L+ F +G SG AV +D
Sbjct: 628 SPNVATWNVLVRHLFSNMGHSG-AVQFLD 655
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 198/407 (48%), Gaps = 11/407 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C ++ L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L +M V PD+ T++ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
EM+ +KP + TY +I FC G L+ EM G P+
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPN 415
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 149/354 (42%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R V+ L+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CKEG++R A +F + GL P +VS+NTL+ Y K
Sbjct: 125 EESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKI 184
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 185 GDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTF 244
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + ++ +P L YN L+ LCK + L DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSM 304
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVD 364
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L + +Y + N F + GD+ +L K R G+ PN +T
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + + +R+ L P +++ N L+ GL K + Q + +EM G+ P
Sbjct: 250 GHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKP 309
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L CK GD++ + +++ +E D Y LIS C++GR DA +
Sbjct: 310 DKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKML 369
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R M + P++ TYT ++N CK+G V +L M G P+ V+
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 197/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC----TEDCN- 177
+ T +YC ++H L + A K L ++V K + VF +++ T D
Sbjct: 10 RHTLQSYCSMIHFLCTHQMIPEA-KTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR+ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 143/353 (40%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F E +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + + G + +N L+ ++ KEG+++ ++S+
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY K G L L +Q GV
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ--------------- 203
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+D + P+ T
Sbjct: 204 --------------------PDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A+ L+ +
Sbjct: 244 FTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++GDL +E +KR ++ +++ +I L
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGL 356
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y ++++ LC + EA L +V R + DI ++ L
Sbjct: 13 LQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 46/458 (10%)
Query: 162 SVDVFQDLISC-----TEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
SV VF+ + SC ++CN A K G E+ F + G +P I+S + +L+
Sbjct: 258 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 317
Query: 214 GLLKL--NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
G +C+ ++ M GI PN H FNIL + + + G +DK E ++ +G
Sbjct: 318 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 377
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY------------------ 313
PD VT+ T+ISS C+ GRL+DA + + M V P Y
Sbjct: 378 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 437
Query: 314 ------------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
++++N LCKEG+V E + MV G P++V++N+L+ Y
Sbjct: 438 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 497
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C G M+E+ +LL M GI P+ + +V GY K GR+ AL + ++ GV +
Sbjct: 498 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 557
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+Y ++ L Q R AA + + + G S+ Y ++ LC+ + +A +L ++
Sbjct: 558 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 617
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ N+K + T+ +I +GR EA L D + G++P+ Q ++I E+
Sbjct: 618 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 677
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+A+ L K D+ N + M +++K
Sbjct: 678 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAK 715
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 210/429 (48%), Gaps = 3/429 (0%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ +VK G + ++ F + ++ G P I+ CN ++ L K+ +D+ + ++M GI
Sbjct: 142 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 201
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T++++ CK+ +DK LE++ E G P+ +TYN+LI Y G N++ +
Sbjct: 202 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 261
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ M V+P + + ++ L K G+ EA +F MV +G PDI+SY+T++ Y
Sbjct: 262 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 321
Query: 358 EGK--MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ + ++ M+ GI P+ I++ Y + G + A+ + ++Q G+
Sbjct: 322 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 381
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+ +I +LC+ R A + G PS +Y L++ C + A L E
Sbjct: 382 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 441
Query: 476 MVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M++++I P + + ++I C GR E +MD M+++G P+ L+ GYC+
Sbjct: 442 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 501
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ +A ALL A + Y + + + ++G + + + + L G P ++
Sbjct: 502 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 561
Query: 595 YMIHSLWKG 603
++H L++
Sbjct: 562 IILHGLFQA 570
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 197/414 (47%), Gaps = 12/414 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L++ +++ D + + + G+ P+ +++ L + F K+G+VDK +
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E+G P ++ N++I CK ++ A + + M + PDL TY+ +++GLCK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ +A ++ +MV G P+ ++YN+LI Y G ES + +M G+ P
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFG-----VSISRDIYDYLIVALCQDNRPFAATSL 437
C + K GR A + + G +S S ++ Y A D+ ++
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY---ATATDSCLADVHNI 333
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G P+ ++N L+ + +C + A+L+ ++M ++ + P T+ +I C
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTE 556
IGR +A+ + M++ G+ P + LI G C ++ KA+ L+ K +
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS--LWKGMERKF 608
++++ N ++G +++ ++ ++ G PN +T ++ L ME F
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 507
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + ++N L K + + + + M + G PN TFN L +C G++++
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +P+ Y TL+ YCK GR++DA ++R M + V P V Y+ +++GL +
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 569
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G + I +Y ++ C+ E+ LL ++ + D T
Sbjct: 570 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 629
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADA 469
+ G+ + N ++ L VA A
Sbjct: 690 KSGHASDSRLLNHIVRMLLNKAEVAKA 716
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 15/339 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SVDVFQ 167
AL FN + D+ + P+ + Y ++ + + A +++ E++ KD P V F
Sbjct: 400 ALHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN--KDIPPPGVKYFS 456
Query: 168 DLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+I+ C E G + E + G +P++V+ N L+ G + +++ +
Sbjct: 457 SIINNLCKE---------GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 507
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + M IGI PN + + L +CKNG +D + +G P V Y+ ++
Sbjct: 508 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 567
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ R A ++ M + TY ++ GLC+ EA+ L ++ + DI
Sbjct: 568 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 627
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+++N +I A K G+ QE+K L + G+ P+ T +++ KE A NL +
Sbjct: 628 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 687
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ G + + ++++ L A++ L IG++
Sbjct: 688 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 726
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L G +P+ V + +L+GL + +++ EM G
Sbjct: 531 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 590
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ ++ C+N D+ N LEK+ D++T+N +IS+ K GR +A L+
Sbjct: 591 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P++ TY+ ++ L KE EA LF + G + D N ++ +
Sbjct: 651 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 710
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ ++ + L + N + + T ++ + +EG +
Sbjct: 711 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 39/170 (22%)
Query: 479 RNIKPSLSTYRALICCF------------------CGIG-------------RSGE---A 504
R+ P++ TY LI C+ G+G + GE A
Sbjct: 94 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 153
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L EM+E G+LP IC +I C K+++KAE+++ D +Y+ + +
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH-----SLWKGMERKFQ 609
+ + K + ++ + G PN++T +IH +W R F+
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 26/200 (13%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP-HSVDVFQDLI---SCTEDCN 177
+KPTS Y +I+H L + + A KM E++E H+ V + +CT++ N
Sbjct: 553 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 612
Query: 178 W----------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
A KVG +E+ + F G P+I + + ++ L
Sbjct: 613 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 672
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K ++ ++ + + G ++ N + + +V K + +L I E +
Sbjct: 673 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 732
Query: 276 VTYNTLISSYCKKGRLNDAF 295
T + L S + ++G + F
Sbjct: 733 STISLLASLFSREGMIKGLF 752
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 250/543 (46%), Gaps = 19/543 (3%)
Query: 74 SHLTLLQNDLKPLLPHLGAHEISRVLLRCQS--DSVSALTFFNWVKNDLEIKPTSSNYCL 131
+H L + K L+P+L HE + + + L FF++ + + + T +YC+
Sbjct: 57 AHKVLDSSKCKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRSYCI 116
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCP-HSVDVFQDLISCT--EDCNWAYVKVGLI-- 186
++ +L +N A L L+E + P D I+ E ++ ++ L+
Sbjct: 117 LIRLLLASNHIPRAKFTLKRLIEGNANTPLKKTDARLSEIASAFLELGERSHGELDLLIY 176
Query: 187 -----------RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
+F TF G PS+ SCNFL++ L+K N + + ++V++ M R G
Sbjct: 177 ILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGG 236
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ + +T+ + +CK G +D+ G K+ E G P++VTYN LI CK GRL +A
Sbjct: 237 VLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEAL 296
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
M V P LVTY L+NGL K K EA+ + M +G SP+ +N LI Y
Sbjct: 297 MFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGY 356
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
++G M ++ + +M G+ P+ T ++QG+ + ++ A ++ L +S++
Sbjct: 357 SRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNE 416
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
D Y++ LC+ ++ +A +++ + + + L+ LCKC +A+ L
Sbjct: 417 DACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFR 476
Query: 476 MVD-RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ D + + + +T AL+ C G E + EM+E G++ D LI G C
Sbjct: 477 LADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSG 536
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+ +A L K+ DT +YN + A+ G + + + G PN T
Sbjct: 537 KIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYA 596
Query: 595 YMI 597
M+
Sbjct: 597 LML 599
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 223/492 (45%), Gaps = 10/492 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+S + F + ++ P+ Y ++V+ L KF A +L E+ K
Sbjct: 287 CKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYS--KGFSP 344
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ VF LI Y + G + ++ + G +P+ V+ N LL G + N +
Sbjct: 345 NEFVFNALID-------GYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQM 397
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+Q QV E + + N + + H+ CK+ D ++ + + L
Sbjct: 398 EQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLL 457
Query: 282 ISSYCKKGRLNDAFYL-YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+ CK G+ +A L +R+ ++ + + T L+ GLC+ G + E + MV RG
Sbjct: 458 VCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERG 517
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L D +SYNTLIF CK GK++E+ L +MM G PDT+T +++G +G++
Sbjct: 518 LVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 577
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ E + GV + Y ++ C +R A SL ++ + S +YN L+ +
Sbjct: 578 RVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAH 637
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
K + +A L+D M NI P++ TY ++I C EA + +EM G++P+
Sbjct: 638 SKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNV 697
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LI GYC +++ E++L + +Y + + + + G+ + +L
Sbjct: 698 FCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNE 757
Query: 581 FLRLGFAPNNLT 592
+ G +P+ +T
Sbjct: 758 MIANGISPDTVT 769
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 137/280 (48%), Gaps = 7/280 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I E+FK K + GF+P + NFL+ GL +D +V E G+ PN +
Sbjct: 534 KSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY 593
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ ++ +C +D K+ + V YN LI+++ K G +AF L M
Sbjct: 594 TYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N+ P + TY+++++G+C V EA +F M + GL P++ Y LI YCK G+M
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ +S+L EM N I P+ T I++ GY K G A L+ E+ G+S Y L
Sbjct: 714 DQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 773
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEI-YNELMESL 460
C++N L E + D VP EI Y L++ L
Sbjct: 774 QKGYCKENE------LEETLQGDTAVPLEEITYTTLVDKL 807
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 152/305 (49%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ NT T N L + C+ G++++V +++ E G D ++YNTLI CK G++ +A
Sbjct: 482 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 541
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F L M ++ PD TY LM GL +GK+ + ++ H G+ P+I +Y ++
Sbjct: 542 FKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEG 601
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
YC ++ + SL +++ N + I++ + K G A L ++ + +
Sbjct: 602 YCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPT 661
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y +I +C ++ A + E + +G +P++ Y L+ CK + +
Sbjct: 662 IFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQ 721
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EM I+P+ TY +I +C +G + EA L++EM+ +G+ PD+ VL GYC E
Sbjct: 722 EMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKEN 781
Query: 535 DVNKA 539
++ +
Sbjct: 782 ELEET 786
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 192/423 (45%), Gaps = 1/423 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G I E+ F K + G P++V+ N L++GL K +++ M + P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL + K D+ N L ++ +GF P+ +N LI Y +KG ++DA +
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P+ VT+ TL+ G C+ ++ +A Q+ ++ LS + + + ++ CK
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDI 417
K + ++ ++ I + ++V G K G+ L A++L L + G++ +
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTT 489
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ L+ LC+ + + + + G V YN L+ CK + +A LK++M+
Sbjct: 490 SNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM 549
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ KP TY L+ G+ + ++ E + G++P+ +++ GYC ++
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRID 609
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A +L YN + ++ G+ ++ +L+ P T +I
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669
Query: 598 HSL 600
H +
Sbjct: 670 HGM 672
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y I + F K + + S V N L+ K + +++ + M I P
Sbjct: 601 GYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T++ + H C N V++ G E++ EG P++ Y LI YCK G+++ +
Sbjct: 661 TIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESIL 720
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + P+ +TYT +++G CK G +EA +L + M+ G+SPD V+Y L YCKE
Sbjct: 721 QEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKE 780
Query: 359 GKMQES 364
+++E+
Sbjct: 781 NELEET 786
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G E+FK P+I + + +++G+ + +++ ++EEM G+ P
Sbjct: 636 AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMP 695
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + L +CK G +D++ L+++ P+ +TY +I YCK G +A L
Sbjct: 696 NVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLL 755
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
M + PD VTYT L G CKE ++ E Q
Sbjct: 756 NEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 233/488 (47%), Gaps = 16/488 (3%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
+L+C+S + F ++ + ++ ++H+L +K++ A ++ L+E +K
Sbjct: 47 AILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLK 106
Query: 158 DCPHSVDVFQDLISCTEDCN-------------WAYVKVGLIRESFKTFRKTLDVGFQPS 204
++ L + ED ++++GL E+ R ++ P
Sbjct: 107 RHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR---EMKCSPD 163
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+C +LNGL++ D W Y+ M G+ P+ H + +L K G K L+
Sbjct: 164 SKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD 223
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ G P++ Y I C+ ++ +A ++ +M + VLP+L TY+ +++G CK G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
VR+A+ L+ ++ L P++V + TL+ +CK ++ ++SL M+ G+ P+ +
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ K G +L A+ L+ E++ +S Y LI LC +++ A L +++ +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
PS YN L+ CK ++ AL L EM ++P++ T+ LI +C + A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L EM G++PD LI+ + E ++ +A L + + ++ + +
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 565 FAEDGDLS 572
F ++G LS
Sbjct: 524 FWKEGRLS 531
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 186/411 (45%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL + K + +G +P++ + L + N +++ +++E M + G+ PN +
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + +CK G+V + G ++I P++V + TL+ +CK L A L+ M
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+L Y L++G CK G + EA L M LSPD+ +Y LI C E ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L +M I+P + T ++ GY KE + AL+L E+ GV + + L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C AA L + G VP + Y L+++ K ++ +AL L +M++ I
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ T+ L+ F GR A+ E + + LI G C + +A
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
D SY ++ ++ ++ M LQ ++ G PN L
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + F+K + PS + N L++G K ++Q + EM G+ PN TF+
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L +C D+ G ++ +G PD+VTY LI ++ K+ + +A LY M
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 306 VLPD-----------------------------------LVTYTTLMNGLCKEGKVREAH 330
+ P+ V +T L+ GLC+ G + A
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ F M G++PDI SY +++ + +E ++ ++ L +M+ GI P+ Q++ + Y
Sbjct: 570 RFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629
Query: 391 GKEGRLLSA 399
G + SA
Sbjct: 630 QANGYVKSA 638
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C D V+ A F +KN+ I P+S+ Y ++H A+ + E+
Sbjct: 385 CIEDQVAEANRLFQKMKNE-RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT--ASGVE 441
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
++ F LI Y V I+ + + + G P +V+ L++ K
Sbjct: 442 PNIITFSTLID-------GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + ++Y +M GI PN HTF L F K G + F ++ ++ + V +
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI C+ G + A + M + PD+ +Y +++ G +E ++ + L M+ G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Query: 341 LSPDIVSYNTLIFAYCKEGKMQES 364
+ P+++ L Y G ++ +
Sbjct: 615 ILPNLLVNQLLARFYQANGYVKSA 638
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%)
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ R + P + Y L C G + L+DEM G+ P+ I + I C +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ +AE + K + + +Y+A+ + + + G++ + L K L PN +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 596 MIHSLWKGME 605
++ K E
Sbjct: 310 LVDGFCKARE 319
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 190/363 (52%), Gaps = 2/363 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + + + R+ QP +V N +++G+ K ++ + +Y E I P+
Sbjct: 310 KVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVF 369
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L FC G + K+ + PD+ T++ L+ +CK G + +A + +M
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++++ PD+VTY++LM+G C +V +A +F+ M HRG++ ++ SYN +I +CK +
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L EM I+PD T ++ G K GR+ AL LV E+ G Y+ +
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ ALC+ + A +LL ++ G P + Y L++ LC+ + DA + ++++ +
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK-AE 540
+ Y +I FC G EA++L+ +M E+G +PD++ ++I EKD N AE
Sbjct: 610 NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL-FEKDENDMAE 668
Query: 541 ALL 543
LL
Sbjct: 669 KLL 671
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 196/411 (47%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K L G++P ++ + G I Q ++++ +G + ++ L + CK G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+ L + + + PD+V YNT+I CK +NDAF LY + + PD+ TY
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++G C GK+++A LF++M + + PD+ +++ L+ +CK+G ++E+K++L MM
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
I PD T ++ GY + A ++ + GV+ + Y+ +I C+ A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L + + P + Y+ L++ LCK ++ AL L DEM R +P + TY +++
Sbjct: 493 MKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDA 552
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C +A++L+ ++ G+ PD +L+ G C + A + K D
Sbjct: 553 LCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLD 612
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+Y + F + G + + L + G P+ T + +I SL++ E
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 663
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 214/423 (50%), Gaps = 7/423 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ K + +GF VS L+NGL K+ ++ + P+ +
Sbjct: 277 GQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMY 336
Query: 244 NILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N + CK+ V D + + EK+ + F PD+ TYN LIS +C G+L DA L+ M
Sbjct: 337 NTIIDGMCKDKHVNDAFDLYSEKVSKRIF-PDVFTYNALISGFCIVGKLKDAIDLFNKMT 395
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+N++PD+ T++ L++G CK+G ++EA + M+ + + PD+V+Y++L+ YC ++
Sbjct: 396 SKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVN 455
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++S+ M G+ + + I++ G+ K + A+ L E+ + Y LI
Sbjct: 456 KAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLI 515
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R A L++ + G P + YN ++++LCK V A+ L ++ + I+
Sbjct: 516 DGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIR 575
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P ++TY L+ C G+ +A + +++L G D V+I G+C + ++A AL
Sbjct: 576 PDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALAL 635
Query: 543 LGFFAKKFQIYDTESYN-AVFNMFAED-GDLSK--LMELQKRFLRLGFAPNNLTCKYMIH 598
L + I D ++Y + ++F +D D+++ L E+ R L + ++L ++
Sbjct: 636 LSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALT-DDLVASILVR 694
Query: 599 SLW 601
W
Sbjct: 695 RTW 697
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 161/304 (52%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
VG ++++ F K P + + + L++G K I + V M + I P+ T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L +C +V+K + G ++ +YN +I+ +CK +++A L++ M+
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + PD++TY++L++GLCK G++ A +L M +RG PDI++YN+++ A CK+ +
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +LL ++ G GI PD T I+V+G + G+L A + +L G ++ Y +I
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C A +LL ++ ++G +P + Y ++ SL + D A L EM+ R +
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Query: 483 PSLS 486
+L+
Sbjct: 681 VALT 684
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 145/272 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G I+E+ + +P +V+ + L++G +N +++ ++ M G+
Sbjct: 412 GFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTA 471
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++NI+ + FCK VD+ +++ + PD++TY++LI CK GR++ A L
Sbjct: 472 NVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELV 531
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R PD++TY ++++ LCK+ V +A L ++ +G+ PD+ +Y L+ C+
Sbjct: 532 DEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQS 591
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+++++ + +++ G D + +++QG+ +G AL L+ +++ G Y
Sbjct: 592 GKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTY 651
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+ +I++L + + A LL + G + +L
Sbjct: 652 EIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 186/368 (50%), Gaps = 4/368 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++V+ N +++GLLK ++ + EM +G+ P+ T+N + + +CK G++ +
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEA 403
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + G P ++TYNTLI YC+ G L +A L M + PD+ TYT LMNG
Sbjct: 404 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
K + A + F M+ +GL PD +YNT I A G ++ L MM GIYPD
Sbjct: 464 SHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPD 523
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T T +I+ G K G L A +L +++ G+ Y LI A C+ A LL
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLN 583
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ DG PS+ Y L+ + C+ ++ A +M+D I+P+ TY LI C G
Sbjct: 584 GMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTG 643
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA--KKFQIYDTES 557
R+ A EMLE G+ P+ +LI+G C E N A+A+ +F + D +
Sbjct: 644 RTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREG--NWADAIRLYFEMHQNGIPPDYCT 701
Query: 558 YNAVFNMF 565
+NA+F F
Sbjct: 702 HNALFKGF 709
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 179/374 (47%), Gaps = 9/374 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I PT Y I+H L + + A E+ ++ + DLI+ N Y
Sbjct: 345 IMPTLVTYNAIIHGLLKSEQVEAAQLKFAEM--------RAMGLLPDLITYNSMLN-GYC 395
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E+ G P++++ N L++G +L +++ ++ EEM G P+
Sbjct: 396 KAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVC 455
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL + K ++ F +++ +G PD YNT I + G + AF L +M
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM 515
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + PD VTY +++GLCK G +++A L +MV GL PD ++Y LI A+C+ G +
Sbjct: 516 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLL 575
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ LL M+ +G+ P T I++ + G L SA ++ G+ + Y+ L
Sbjct: 576 SEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+ R A + + G P+ Y L++ C+ + ADA+ L EM I
Sbjct: 636 IHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695
Query: 482 KPSLSTYRALICCF 495
P T+ AL F
Sbjct: 696 PPDYCTHNALFKGF 709
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 203/481 (42%), Gaps = 56/481 (11%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
V+DC + V +D W V+ +R+ L + +P+IV+ N LL+
Sbjct: 208 VRDCNCVLRVLRD------AARWDDVRA--------VYREMLQLEIEPTIVTYNTLLDSF 253
Query: 216 LKLNCIDQCWQVYEEMG------------------------------------RIGICPN 239
LK D+ + +EM R+ +
Sbjct: 254 LKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKAS 313
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ T+N L + G V KV ++E EG P LVTYN +I K ++ A +
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +LPDL+TY +++NG CK G ++EA L + GL+P +++YNTLI YC+ G
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++E++ L EM+ G +PD T I++ G K L A E+ G+ Y+
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN 493
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I A A L E + G P YN +++ LCK ++ DA LK +MV
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P TY LI C G EA L++ M+ G+ P +LI+ C ++ A
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613
Query: 540 EALLGFFAKKFQI---YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
G+F K + + +YN + + G L G APN T +
Sbjct: 614 ---YGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLL 670
Query: 597 I 597
I
Sbjct: 671 I 671
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 188/412 (45%), Gaps = 3/412 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
FR G P + CN +L L D VY EM ++ I P T+N L
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDL--VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
F K G D+ + L+++E +G L VTYN +IS ++G L +A L M R +
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKK 311
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
TY L+ L + G V++ L M + G+ P +V+YN +I K +++ ++
Sbjct: 312 ASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLK 371
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM G+ PD T ++ GY K G L AL L+ +L+R G++ + Y+ LI C+
Sbjct: 372 FAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR 431
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A L E + + G P + Y LM K ++ A DEM+ + ++P
Sbjct: 432 LGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFA 491
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y IC +G + +A L + M+ G+ PD+ V+I+G C ++ A+ L
Sbjct: 492 YNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMV 551
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
D +Y + + E G LS+ +L + G P+ +T +IH+
Sbjct: 552 SDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHT 603
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 176/387 (45%), Gaps = 13/387 (3%)
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
C C + + G+ P+ N + V D V ++ + +P +VTYN
Sbjct: 188 CSTLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYN 247
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
TL+ S+ K+GR ++A L + M + L + VTY +++ L +EG + A +L M
Sbjct: 248 TLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM- 306
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+YN LI A + G +Q+ ++L EM GI P T I+ G K ++
Sbjct: 307 RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVE 366
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+A E++ G+ Y+ ++ C+ A LL + + G P++ YN L+
Sbjct: 367 AAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLI 426
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ C+ + +A LK+EMV++ P + TY L+ + A DEML G+
Sbjct: 427 DGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQ 486
Query: 518 PD-----SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
PD ++IC LI G D +KA L K DT +YN + + + G+L
Sbjct: 487 PDCFAYNTRICAELILG-----DTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLK 541
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
+L+ + + G P+ +T +IH+
Sbjct: 542 DAKDLKMKMVSDGLQPDCITYTCLIHA 568
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 125/246 (50%), Gaps = 10/246 (4%)
Query: 156 VKDCPHSVDVFQDLIS--CTEDCNWAY-------VKVGLIRESFKTFRKTLDVGFQPSIV 206
V++ P + + F +++S DC +AY + +G ++F+ + G P V
Sbjct: 467 VRNLPMAREFFDEMLSKGLQPDC-FAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTV 525
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N +++GL K + + +M G+ P+ T+ L H C+ G + + L +
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGM 585
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+G P +VTY LI + C++G L A+ +R M + P+ +TY L++ LC+ G+
Sbjct: 586 VSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRT 645
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A+ FH M+ RGL+P+ +Y LI C+EG ++ L +EM NGI PD T +
Sbjct: 646 LLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 705
Query: 387 VQGYGK 392
+G+ K
Sbjct: 706 FKGFDK 711
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + ++ FRK LDVG +P+ ++ N L++ L + + + EM G+ PN +
Sbjct: 606 RRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKY 665
Query: 242 TFNILTHVFCKNGD-VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ +L C+ G+ D + + E + + G PD T+N L + K + YL I
Sbjct: 666 TYTLLIDGNCREGNWADAIRLYFE-MHQNGIPPDYCTHNALFKGFDKGHMYHAIEYLENI 724
Query: 301 M 301
+
Sbjct: 725 V 725
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 11/184 (5%)
Query: 427 QDNRPFAATSL----LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+D P A ++L + G P + N ++ L D + EM+ I+
Sbjct: 181 RDATPAACSTLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIE 240
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLE--SGMLPDSQICRVLINGYCMEKDVNKAE 540
P++ TY L+ F GR EA L+ EM G L + V+I+ E + A
Sbjct: 241 PTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAA 300
Query: 541 ALLGF--FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
L+ +KK + +YN + E G + K+ LQ G P +T +IH
Sbjct: 301 KLVDSMRLSKKASSF---TYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIH 357
Query: 599 SLWK 602
L K
Sbjct: 358 GLLK 361
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 219/427 (51%), Gaps = 9/427 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I +F K L G+QP V+ L+ GL + + ++++ G +
Sbjct: 108 FCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLD 167
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G+ L +I+ +P++V YNT+I CK+ +++A L+
Sbjct: 168 QVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFS 227
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + ++VTY+ +++G C GK+ EA + MV + ++PD+ YNTL+ A KEG
Sbjct: 228 EMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEG 287
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+K++L ++ + P+ T ++ GY K + +A+ L+ GV+ Y+
Sbjct: 288 KVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--VFNAVGLM------GVTPDVWSYN 339
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ R A +L + + Q VP+ YN L++ LCK ++ A L DEM DR
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING-YCMEKDVNK 538
++ TY +LI C G+ +A++L+++M + G+ PD +L++G C K +
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKN 459
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ L K + +YN + ++G L + LQ + G +PN +T K +I
Sbjct: 460 AQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIIC 519
Query: 599 SLWKGME 605
+L + E
Sbjct: 520 ALLEKGE 526
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 190/363 (52%), Gaps = 9/363 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + + R+ +P++V N +++ L K + + ++ EM GI N
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + H FC G + + GFL ++ + +PD+ YNTL+ + K+G++ +A + ++
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P+++TY TL++G K +F+ + G++PD+ SYN +I CK ++
Sbjct: 300 VKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTPDVWSYNIMINRLCKIKRV 351
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ +L EM + P+T T ++ G K GR+ A +L+ E+ G + Y+ L
Sbjct: 352 EEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSL 411
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL-CKCDSVADALLLKDEMVDRN 480
I LC++ + A +L+ ++ G P + N L+ L CK + +A L +++D+
Sbjct: 412 INGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG 471
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P++ TY +I C G EA +L +M +SG P++ +++I + + +KAE
Sbjct: 472 YHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAE 531
Query: 541 ALL 543
LL
Sbjct: 532 KLL 534
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 184/417 (44%), Gaps = 43/417 (10%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ F + L + P I+ N +L+ K+ + + I P+ T NI
Sbjct: 44 VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC G ++ L KI + G+ PD VT TLI C KG++ A + + + +
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
D V+Y TL+NG+CK G+ R A QL R+ R P++V YNT+I CK + E+
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+L EM GI + T I+ G+ G+L AL + E+
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEM------------------- 264
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+L+ I D Y IYN L+++L K V +A + +V +KP++
Sbjct: 265 -----------VLKAINPDVY-----IYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNV 308
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY LI G A + + + G+ PD ++IN C K V +A L
Sbjct: 309 ITYNTLI--------DGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKE 360
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K + +T +YN++ + + G +S +L G N +T +I+ L K
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCK 417
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 122/214 (57%), Gaps = 1/214 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G P + S N ++N L K+ +++ +Y+EM + + PNT T+N L CK+G +
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++++ + G +++TYN+LI+ CK G+L+ A L M + + PD+ T L++
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLH 448
Query: 319 GL-CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
GL CK +++ A LF ++ +G P++ +YN +I+ +CKEG + E+ +L +M +G
Sbjct: 449 GLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCS 508
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
P+ T +II+ ++G A L+ E+ G+
Sbjct: 509 PNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 114/216 (52%), Gaps = 9/216 (4%)
Query: 169 LISCTEDCNWAY-------VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
L+ T D W+Y K+ + E+ +++ P+ V+ N L++GL K I
Sbjct: 328 LMGVTPDV-WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
W + +EM G N T+N L + CKNG +DK + K++++G PD+ T N L
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL 446
Query: 282 ISSY-CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+ CK RL +A L++ + + P++ TY ++ G CKEG + EA+ L +M G
Sbjct: 447 LHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSG 506
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
SP+ +++ +I A ++G+ +++ LL EM+ G+
Sbjct: 507 CSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 232/493 (47%), Gaps = 16/493 (3%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
+ N K+ +E P Y +++ L NN+ A K+L E+ K C + LIS
Sbjct: 169 YSNMKKDGME--PNVFTYNILLKALCKNNRVDGAHKLLVEMSS--KGCDPDEVSYTTLIS 224
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ K+G ++E+ + L + F PS+ N L+NG+ K ++ +Q+ +EM
Sbjct: 225 -------SLCKLGKVKEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEM 272
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
GI PN ++ + + G+V+ L K+ G P+L T+ +LI + KG
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++A + M R V+P++V Y LM+GLC + + +A +F++M G P++ +Y+ L
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I Y K G + + + M+ +G +P+ +V + A L+ +Q
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENC 452
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ ++ I LC R A + +++G G P+ YNEL++SL K +A
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFG 512
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L +M R I+ +L TY +I +C G GEA+ L+ +M+ G PD+ ++I+ YC
Sbjct: 513 LVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYC 572
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ VN A L+ + D +Y ++ + + + + +R L G +PN
Sbjct: 573 KQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVA 632
Query: 592 TCKYMIHSLWKGM 604
T ++ L+ M
Sbjct: 633 TWNVLVRHLFSNM 645
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 137/538 (25%), Positives = 237/538 (44%), Gaps = 49/538 (9%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
L+ + D AL +F + N K T Y +++ LA + +L ++ C
Sbjct: 50 LKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISC 109
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S D+F +I +Y + G ++ KTF + D +P++ N +L+ LL N
Sbjct: 110 --SEDLFISVIG-------SYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDEN 160
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+Y M + G+ PN T+NIL CKN VD + L ++ +G DPD V+Y
Sbjct: 161 RFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYT 220
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TLISS CK G++ +A L + P + Y L+NG+CKE EA QL M+++
Sbjct: 221 TLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNK 275
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ P+++SY T+I A G ++ S ++L +M G P+ T +++G+ +G A
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L+ + R GV + Y+ L+ LC A S+ ++ +G P++ Y+ L++
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Query: 460 -----------------------------------LCKCDSVADALLLKDEMVDRNIKPS 484
LC+ A L + M N P+
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
T+ I CG GR A+ + D+M SG P++ L++ ++ +A L+
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +YN + + G L + +EL + + G P+ +T +I + K
Sbjct: 516 DMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCK 573
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 11/395 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P +Y I++ L+ ++ +L ++ + C ++ F LI +
Sbjct: 277 IDPNVISYTTIINALSDAGNVELSLAVLAKM--FARGCSPNLHTFTSLIK-------GFF 327
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G E+ + + + G P++V+ N L++GL + V+ +M G CPN
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + K GD+D + + G P++V Y ++ C+ N A+ L M
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N P+ VT+ T + GLC G+V A ++F +M + G P+ +YN L+ + K+ +
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRF 507
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L+ +M GI + T I+ GY G L AL L+ ++ G + +
Sbjct: 508 GEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIV 567
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A C+ + A L++R+ + P + Y L+ +C V +A++ M+ I
Sbjct: 568 IDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGI 627
Query: 482 KPSLSTYRALI-CCFCGIGRSGEAVSLMDEMLESG 515
P+++T+ L+ F +G SG AV +D +L SG
Sbjct: 628 SPNVATWNVLVRHLFSNMGHSG-AVQFLDAVLGSG 661
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 197/401 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ V+ N +++G K +++ ++ EM + GI P+ T+N + + CK +DK
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ ++G PD TYN+LI Y G+ +A + + M + +LPD+VT +LM LCK
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK+++A +F M +G DI SY ++ Y +G + + L M+ +GI PD+
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y K G L A + E++ GV Y +I ALC+ + A ++
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G PS+ Y+ L++ C + A L +M+++ ++P + + +I C +GR
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ P+ + L++GYC+ + A + + Y +
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L G P+ ++H L++
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQA 614
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 206/441 (46%), Gaps = 42/441 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +YC+++ L + K A ++L + E C + + +I + K
Sbjct: 177 PDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID-------GFFKE 229
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ F + + G P + + N ++N L K +D+ + +M G+ P+ T+
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA--------- 294
N L + + G + +K+ +G PD+VT N+L++S CK G++ DA
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349
Query: 295 --------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
L+ +M + PD + L+ K G +
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDR 409
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +F+ M +G+ PD+V+Y+T+I A C+ GKM ++ +M+ G+ P T ++Q
Sbjct: 410 ATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQ 469
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ G LL A +LV+++ G+ ++++I LC+ R A ++ + G P
Sbjct: 470 GFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHP 529
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ +YN LM+ C + +AL + D MV I+P++ Y L+ +C +GR E +SL
Sbjct: 530 NVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLF 589
Query: 509 DEMLESGMLPDSQICRVLING 529
E+L G+ P + + ++++G
Sbjct: 590 REILHKGIKPSTTLYNIILHG 610
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 178/394 (45%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+++ F G + I S +LNG C+ +++ M GI P++H
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN+L + K G +D+ ++ E+G +PD+VTY+T+I++ C+ G+++DA + M
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452
Query: 302 YRRNVLPDLVTYTTLMNG-----------------------------------LCKEGKV 326
+ V P + TY L+ G LCK G+V
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F + GL P+++ YNTL+ YC GKM+ + + M+ GI P+ +
Sbjct: 513 MDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTL 572
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ G+ S +Y+ ++ L Q R A + + G
Sbjct: 573 VNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGI 632
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
Y+ ++ L K +A+LL E+ N+K ++T +I I R EA
Sbjct: 633 AMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + SG++P +++ E V +A+
Sbjct: 693 LFASISRSGLVPSVVTYSIMMTNLIKEGLVEEAD 726
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 190/392 (48%), Gaps = 1/392 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G++ + F + + G +P +V+ + ++ L ++ +D + + +M G+ P
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAP 459
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ L FC +GD+ K + ++ +G PD+ +N +I++ CK GR+ DA ++
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ P+++ Y TLM+G C GK+ A ++F MV G+ P++V Y TL+ YCK
Sbjct: 520 DFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKV 579
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E SL E++ GI P T II+ G + GR + A E+ G+++ R Y
Sbjct: 580 GRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTY 639
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ L +++ A L + + + N ++ + + V +A L +
Sbjct: 640 SIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISR 699
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQICRVLINGYCMEKDVN 537
+ PS+ TY ++ G EA + M +G P+SQ+ ++ ++++
Sbjct: 700 SGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIV 759
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+A L ++ D + + ++F+ G
Sbjct: 760 RAGTYLSKIDERSFSLDHSTTTLLIDLFSSKG 791
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV--LPDLVTYTTLMNG 319
L ++ G PD+ +Y ++ S C + A L R+M LP+ V Y T+++G
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
KEG V +A LF+ MV RG+SPD+ +YN ++ A CK M +++++L +M+ G+ PD
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA----- 434
+T ++ GY G+ A+ + ++ G+ + L+ +LC+ + A
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345
Query: 435 ------------------------------TSLLERIGQDGYVPSLEIYNELMESLCKCD 464
T L + DG P I+N L+++ KC
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCG 405
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ A ++ +EM ++ ++P + TY +I C IG+ +AV ++M++ G+ P
Sbjct: 406 MLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYH 465
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF--- 581
LI G+C D+ KA+ L+ K D +N + N + L ++M+ Q F
Sbjct: 466 FLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCK---LGRVMDAQNIFDFT 522
Query: 582 LRLGFAPN 589
+ +G PN
Sbjct: 523 ISIGLHPN 530
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 150/358 (41%), Gaps = 6/358 (1%)
Query: 251 CKNGDVDKVNGFLEKIEEEG---FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C++G V F G P L TY L+ + R + + + +
Sbjct: 81 CRDGPALAVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLG 140
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQ-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
D + + L+ GLC+ + EA L HRM H G PD+ SY ++ + C + K ++
Sbjct: 141 IDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE 200
Query: 367 LLYEMMGNGIY--PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
LL M G P+ ++ G+ KEG + A +L E+ + G+S Y+ ++ A
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC+ A ++L ++ G +P YN L+ +A+ + +M + I P
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ T +L+ C G+ +A + D M G D ++++NGY + + L
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D+ +N + +A+ G L + + G P+ +T +I +L +
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCR 438
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 177/345 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I + F K ++G + + L+NGL K + ++E+M G+ PN +
Sbjct: 209 KNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLY 268
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + +C G + + +++ E G + ++VTYNTLI C++ R+ +A L M
Sbjct: 269 TYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+L+TY TL+ G C G + +A L ++ GLSP +V+YN LI Y K G
Sbjct: 329 KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNW 388
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM G GI P TC +++ Y + + A + +++FG+ +Y L
Sbjct: 389 KGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVL 448
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC ++ L +G+ PS IYN ++ CK D+ AL L EM + +
Sbjct: 449 IHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGL 508
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P++++Y ++I C G+ EA L+D+M+E + P + I ++
Sbjct: 509 VPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 196/443 (44%), Gaps = 45/443 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVG--FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR--- 233
A++K L+ ++ F + +D G F+P+I N LL L++ NC ++ W + E+
Sbjct: 102 AHLKSQLLDKALIFFNEMVDKGLVFRPNIF--NSLLGSLVRSNCFEKAWLFFNELKERVK 159
Query: 234 -------------------------------IGICPNTHTFNILTHVFCKNGDVDKVNGF 262
+G+ PN + L CKNGD+++ F
Sbjct: 160 FDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLF 219
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+K+ E G + T+ LI+ KKG D F L+ M + P+L TY LMN C
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EGK+ A LF M RG+ ++V+YNTLI C+E ++ E++ L+ +M + P+ T
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ G L A +L+ +L+ G+S S Y+ LI + L +
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G PS L+++ + + A + M + P + Y LI C G
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E+ L M E + P I +I+GYC E + +A LL K + + SY+++
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSII 519
Query: 563 NMFAEDGD-------LSKLMELQ 578
+ +DG L K++ELQ
Sbjct: 520 GVLCKDGKWEEAEVLLDKMIELQ 542
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 183/392 (46%), Gaps = 1/392 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
++N LK +D+ + EM G+ + FN L ++ +K F +++E
Sbjct: 99 IINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER- 157
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
D+ ++ +I C+ G L+ +F L ++ + P++V YTTL++G CK G + A
Sbjct: 158 VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERAR 217
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
F +M GL + ++ LI K+G ++ L +M NG++P+ +T ++ Y
Sbjct: 218 LFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
EG++ A +L E++ GV + Y+ LI +C++ R + A L++++ + P+L
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ C ++ A L D++ + PSL TY LI + G L E
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M G+ P C VLI+ Y +++ KA + K + D Y + + G+
Sbjct: 398 MEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN 457
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +L + + P+++ MIH K
Sbjct: 458 MKESSKLFRSMGEMHVEPSDVIYNTMIHGYCK 489
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y G I +F F + + G + ++V+ N L+ G+ + + + ++ ++M + + PN
Sbjct: 277 YCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPN 336
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L FC G++DK + L++++ G P LVTYN LI Y K G L R
Sbjct: 337 LITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAR 396
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + P VT T L++ + ++ +A Q++ M GL PD+ Y LI C +G
Sbjct: 397 EMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKG 456
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
M+ES L M + P ++ GY KE AL L+ E++ G+ + Y
Sbjct: 457 NMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYS 516
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+I LC+D + A LL+++ + PS I N
Sbjct: 517 SIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILN 551
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
++CT + AYV++ + ++F+ + G P + L++GL + + +++
Sbjct: 408 VTCTVLID-AYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFR 466
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
MG + + P+ +N + H +CK + + L ++E +G P++ +Y+++I CK G
Sbjct: 467 SMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDG 526
Query: 290 RLNDAFYLYRIMYRRNVLP 308
+ +A L M + P
Sbjct: 527 KWEEAEVLLDKMIELQLKP 545
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 217/477 (45%), Gaps = 51/477 (10%)
Query: 162 SVDVFQDLISC-----TEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
SV VF+ + SC ++CN A K G E+ F + G +P I+S + +L+
Sbjct: 172 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 231
Query: 214 GLLKL--NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
G +C+ ++ M GI PN H FNIL + + + G +DK E ++ +G
Sbjct: 232 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 291
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY------------------ 313
PD VT+ T+ISS C+ GRL+DA + + M V P Y
Sbjct: 292 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 351
Query: 314 ------------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
++++N LCKEG+V E + MV G P++V++N+L+ Y
Sbjct: 352 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 411
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C G M+E+ +LL M GI P+ + +V GY K GR+ AL + ++ GV +
Sbjct: 412 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 471
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+Y ++ L Q R AA + + + G S+ Y ++ LC+ + +A +L ++
Sbjct: 472 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 531
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ N+K + T+ +I +GR EA L D + G++P+ Q ++I E+
Sbjct: 532 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 591
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+A+ L K D+ N + M +++K +L + NNLT
Sbjct: 592 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAK----ASNYLSI-IGENNLT 643
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 210/429 (48%), Gaps = 3/429 (0%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ +VK G + ++ F + ++ G P I+ CN ++ L K+ +D+ + ++M GI
Sbjct: 56 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 115
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T++++ CK+ +DK LE++ E G P+ +TYN+LI Y G N++ +
Sbjct: 116 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 175
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ M V+P + + ++ L K G+ EA +F MV +G PDI+SY+T++ Y
Sbjct: 176 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 235
Query: 358 EGK--MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ + ++ M+ GI P+ I++ Y + G + A+ + ++Q G+
Sbjct: 236 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 295
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+ +I +LC+ R A + G PS +Y L++ C + A L E
Sbjct: 296 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 355
Query: 476 MVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M++++I P + + ++I C GR E +MD M+++G P+ L+ GYC+
Sbjct: 356 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 415
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ +A ALL A + Y + + + ++G + + + + L G P ++
Sbjct: 416 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 475
Query: 595 YMIHSLWKG 603
++H L++
Sbjct: 476 IILHGLFQA 484
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 197/414 (47%), Gaps = 12/414 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L++ +++ D + + + G+ P+ +++ L + F K+G+VDK +
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E+G P ++ N++I CK ++ A + + M + PDL TY+ +++GLCK
Sbjct: 71 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ +A ++ +MV G P+ ++YN+LI Y G ES + +M G+ P
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFG-----VSISRDIYDYLIVALCQDNRPFAATSL 437
C + K GR A + + G +S S ++ Y A D+ ++
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY---ATATDSCLADVHNI 247
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G P+ ++N L+ + +C + A+L+ ++M ++ + P T+ +I C
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTE 556
IGR +A+ + M++ G+ P + LI G C ++ KA+ L+ K +
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS--LWKGMERKF 608
++++ N ++G +++ ++ ++ G PN +T ++ L ME F
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 421
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + ++N L K + + + + M + G PN TFN L +C G++++
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +P+ Y TL+ YCK GR++DA ++R M + V P V Y+ +++GL +
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 483
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G + I +Y ++ C+ E+ LL ++ + D T
Sbjct: 484 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 543
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G+ + N ++ L VA A + + N+ ST L F G+
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 663
Query: 503 EAVSLM 508
E + L+
Sbjct: 664 EHIKLL 669
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 15/339 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SVDVFQ 167
AL FN + D+ + P+ + Y ++ + + A +++ E++ KD P V F
Sbjct: 314 ALHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN--KDIPPPGVKYFS 370
Query: 168 DLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+I+ C E G + E + G +P++V+ N L+ G + +++ +
Sbjct: 371 SIINNLCKE---------GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 421
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + M IGI PN + + L +CKNG +D + +G P V Y+ ++
Sbjct: 422 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 481
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ R A ++ M + TY ++ GLC+ EA+ L ++ + DI
Sbjct: 482 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 541
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+++N +I A K G+ QE+K L + G+ P+ T +++ KE A NL +
Sbjct: 542 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 601
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ G + + ++++ L A++ L IG++
Sbjct: 602 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 640
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 107/225 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L G +P+ V + +L+GL + +++ EM G
Sbjct: 445 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 504
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ ++ C+N D+ N LEK+ D++T+N +IS+ K GR +A L+
Sbjct: 505 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 564
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P++ TY+ ++ L KE EA LF + G + D N ++ +
Sbjct: 565 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 624
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++ ++ + L + N + + T ++ + +EG+ + L+
Sbjct: 625 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 39/170 (22%)
Query: 479 RNIKPSLSTYRALICCF------------------CGIG-------------RSGE---A 504
R+ P++ TY LI C+ G+G + GE A
Sbjct: 8 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 67
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L EM+E G+LP IC +I C K+++KAE+++ D +Y+ + +
Sbjct: 68 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH-----SLWKGMERKFQ 609
+ + K + ++ + G PN++T +IH +W R F+
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 177
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 82/202 (40%), Gaps = 26/202 (12%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP-HSVDVFQDLI---SCTEDCN 177
+KPTS Y +I+H L + + A KM E++E H+ V + +CT++ N
Sbjct: 467 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 526
Query: 178 W----------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
A KVG +E+ + F G P+I + + ++ L
Sbjct: 527 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 586
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K ++ ++ + + G ++ N + + +V K + +L I E +
Sbjct: 587 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 646
Query: 276 VTYNTLISSYCKKGRLNDAFYL 297
T + L S + ++G+ + L
Sbjct: 647 STISLLASLFSREGKYREHIKL 668
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 198/408 (48%), Gaps = 8/408 (1%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GR-----IGICPNTHTFNILTHVFCKNG 254
+PS+V+ L+N L K ID+ QV++ + G+ +G+ P+ FN L CK G
Sbjct: 312 IRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVG 371
Query: 255 DVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
+ LE+++ + P+ VTYN LI + K G + A L+R M V P+++T
Sbjct: 372 KEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITL 431
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
TL++GLCK G+V A + F+ M +GL + +Y LI A+C + + EM+
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+G PD ++ G GR+ A +V +L+ G S+ R Y+ LI C+ +
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
LL + + G P YN L+ L K A A + ++M+ ++PS+ TY A+I
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611
Query: 494 CFCGIGRSGEAVSLMDEMLESGML-PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+C E + + EM + + P++ I +LI+ C DV++A +L+ K
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVR 671
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+T +YNA+ + L K EL R + P+ +T + + L
Sbjct: 672 PNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 13/380 (3%)
Query: 230 EMGRIGICPNTHTFNILTHVFC---KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++G G+ P+ L C KNG +V L + G D + N L++
Sbjct: 236 KLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEV---LHCVMRLGGAVDAASCNALLTWLG 292
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS---- 342
+ + L M +R + P +VT+ L+N LCK ++ EA Q+F R+ +G S
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVG 352
Query: 343 --PDIVSYNTLIFAYCKEGKMQESKSLLYEM-MGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
PD+V +NTLI CK GK ++ SLL EM MGN P+T T ++ G+ K G A
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L ++ GV + + L+ LC+ R A + G + Y L+ +
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISA 472
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
C +++ A+ +EM+ P Y +LI C GR +A ++ ++ +G D
Sbjct: 473 FCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLD 532
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
VLI+G+C +K + + LL + DT +YN + + + GD + ++ +
Sbjct: 533 RSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVME 592
Query: 580 RFLRLGFAPNNLTCKYMIHS 599
+ ++ G P+ +T +IH+
Sbjct: 593 KMIKEGLRPSVVTYGAIIHA 612
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 1/322 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + FR+ + G QP++++ N L++GL K + + + + EM G+
Sbjct: 402 GFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKG 461
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L FC ++++ E++ G PD V Y +LIS C GR+NDA +
Sbjct: 462 NAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVV 521
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ D Y L++G CK+ K+ ++L M G+ PD ++YNTLI K
Sbjct: 522 SKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKT 581
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDI 417
G + ++ +M+ G+ P T I+ Y + + + + E+ V + I
Sbjct: 582 GDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVI 641
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI ALC++N A SL+E + P+ YN +++ + + A L D MV
Sbjct: 642 YNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMV 701
Query: 478 DRNIKPSLSTYRALICCFCGIG 499
+ +P T L +G
Sbjct: 702 EEACRPDYITMEVLTEWLSAVG 723
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
+ G +P ++ N L++ L K +V E+M + G+ P+ T+ + H +C +VD
Sbjct: 561 ETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVD 620
Query: 258 K-VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ + F E P+ V YN LI + C+ ++ A L M + V P+ TY +
Sbjct: 621 EGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAI 680
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ G+ + + +A +L RMV PD ++ L G++++ K + E +
Sbjct: 681 LKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFV-EGYQDSS 739
Query: 377 YP 378
YP
Sbjct: 740 YP 741
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 46/458 (10%)
Query: 162 SVDVFQDLISC-----TEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
SV VF+ + SC ++CN A K G E+ F + G +P I+S + +L+
Sbjct: 314 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 373
Query: 214 GLLKL--NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
G +C+ ++ M GI PN H FNIL + + + G +DK E ++ +G
Sbjct: 374 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 433
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY------------------ 313
PD VT+ T+ISS C+ GRL+DA + + M V P Y
Sbjct: 434 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 493
Query: 314 ------------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
++++N LCKEG+V E + MV G P++V++N+L+ Y
Sbjct: 494 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 553
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C G M+E+ +LL M GI P+ + +V GY K GR+ AL + ++ GV +
Sbjct: 554 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 613
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+Y ++ L Q R AA + + + G S+ Y ++ LC+ + +A +L ++
Sbjct: 614 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 673
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ N+K + T+ +I +GR EA L D + G++P+ Q ++I E+
Sbjct: 674 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 733
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+A+ L K D+ N + M +++K
Sbjct: 734 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAK 771
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 211/429 (49%), Gaps = 3/429 (0%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ +VK G + ++ F + ++ G P I+ CN ++ L K+ +D+ + ++M GI
Sbjct: 198 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 257
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T++++ CK+ +DK LE++ E G P+ +TYN+LI Y G N++ +
Sbjct: 258 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 317
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY-- 355
++ M V+P + + ++ L K G+ EA +F MV +G PDI+SY+T++ Y
Sbjct: 318 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 377
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ + + ++ M+ GI P+ I++ Y + G + A+ + ++Q G+
Sbjct: 378 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 437
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+ +I +LC+ R A + G PS +Y L++ C + A L E
Sbjct: 438 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 497
Query: 476 MVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M++++I P + + ++I C GR E +MD M+++G P+ L+ GYC+
Sbjct: 498 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 557
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ +A ALL A + Y + + + ++G + + + + L G P ++
Sbjct: 558 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 617
Query: 595 YMIHSLWKG 603
++H L++
Sbjct: 618 IILHGLFQA 626
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 197/414 (47%), Gaps = 12/414 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L++ +++ D + + + G+ P+ +++ L + F K+G+VDK +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E+G P ++ N++I CK ++ A + + M + PDL TY+ +++GLCK
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ +A ++ +MV G P+ ++YN+LI Y G ES + +M G+ P
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFG-----VSISRDIYDYLIVALCQDNRPFAATSL 437
C + K GR A + + G +S S ++ Y A D+ ++
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY---ATATDSCLADVHNI 389
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G P+ ++N L+ + +C + A+L+ ++M ++ + P T+ +I C
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTE 556
IGR +A+ + M++ G+ P + LI G C ++ KA+ L+ K +
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 509
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS--LWKGMERKF 608
++++ N ++G +++ ++ ++ G PN +T ++ L ME F
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 563
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + ++N L K + + + + M + G PN TFN L +C G++++
Sbjct: 506 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 565
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +P+ Y TL+ YCK GR++DA ++R M + V P V Y+ +++GL +
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 625
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G + I +Y ++ C+ E+ LL ++ + D T
Sbjct: 626 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 685
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADA 469
+ G+ + N ++ L VA A
Sbjct: 746 KSGHASDSRLLNHIVRMLLNKAEVAKA 772
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 15/339 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SVDVFQ 167
AL FN + D+ + P+ + Y ++ + + A +++ E++ KD P V F
Sbjct: 456 ALHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN--KDIPPPGVKYFS 512
Query: 168 DLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+I+ C E G + E + G +P++V+ N L+ G + +++ +
Sbjct: 513 SIINNLCKE---------GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 563
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + M IGI PN + + L +CKNG +D + +G P V Y+ ++
Sbjct: 564 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 623
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ R A ++ M + TY ++ GLC+ EA+ L ++ + DI
Sbjct: 624 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 683
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+++N +I A K G+ QE+K L + G+ P+ T +++ KE A NL +
Sbjct: 684 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 743
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ G + + ++++ L A++ L IG++
Sbjct: 744 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 782
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L G +P+ V + +L+GL + +++ EM G
Sbjct: 587 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 646
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ ++ C+N D+ N LEK+ D++T+N +IS+ K GR +A L+
Sbjct: 647 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P++ TY+ ++ L KE EA LF + G + D N ++ +
Sbjct: 707 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 766
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ ++ + L + N + + T ++ + +EG +
Sbjct: 767 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 39/170 (22%)
Query: 479 RNIKPSLSTYRALICCF------------------CGIG-------------RSGE---A 504
R+ P++ TY LI C+ G+G + GE A
Sbjct: 150 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 209
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L EM+E G+LP IC +I C K+++KAE+++ D +Y+ + +
Sbjct: 210 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 269
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH-----SLWKGMERKFQ 609
+ + K + ++ + G PN++T +IH +W R F+
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 319
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 26/200 (13%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP-HSVDVFQDLI---SCTEDCN 177
+KPTS Y +I+H L + + A KM E++E H+ V + +CT++ N
Sbjct: 609 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 668
Query: 178 W----------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
A KVG +E+ + F G P+I + + ++ L
Sbjct: 669 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 728
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K ++ ++ + + G ++ N + + +V K + +L I E +
Sbjct: 729 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 788
Query: 276 VTYNTLISSYCKKGRLNDAF 295
T + L S + ++G + F
Sbjct: 789 STISLLASLFSREGMIKGLF 808
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 210/419 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++ K F + +D+G P+ ++ N +++G +K ++ +++ ++M G PN
Sbjct: 206 RSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVV 265
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L C+ G +D+ ++++ PD TY+ L + G L+
Sbjct: 266 TYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ V+ T + L+NGLCK+GKV +A Q+F +VH GL P V YNTLI YC+ +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + + +M I PD T ++ G K + A +LV+E+++ GV S + ++ L
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A + ++L + Q G + + ++++ CK + +A+ + D+M+ +++
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ Y ++I + G + +A+ L+++M SG+ +L+ G C +++AE
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L+ + D SYN + + GD K +EL + + G P TC ++ +L
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSAL 624
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 187/389 (48%), Gaps = 2/389 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ SCN LL LL + + + G P+T +N + GD+D
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 263 LEKI--EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L ++ E PD +YN +I+ + G+ +DA ++ M V P+ +TY T+++G
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K G + +L +M+H G P++V+YN L+ C+ G+M E+++L+ EM + + PD
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT I+ G + G + L+L E + GV + L+ LC+D + A + E
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G VP+ IYN L+ C+ + A + ++M R+I+P TY ALI C +
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A L+ EM +SG+ P + LI+ Y + K +L +K D S+ +
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
V F ++G + + + + + APN
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/499 (24%), Positives = 231/499 (46%), Gaps = 44/499 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y +++ L + K S A+K+ E+V++ P+ + + +I +VK
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVAPNRI-TYNTMID-------GHVKG 242
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F+ + L G +P++V+ N LL+GL + +D+ + +EM + P+ T+
Sbjct: 243 GDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTY 302
Query: 244 NIL-----------------------------------THVFCKNGDVDKVNGFLEKIEE 268
+IL + CK+G V K E +
Sbjct: 303 SILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVH 362
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P V YNTLI+ YC+ L AF ++ M R++ PD +TY L+NGLCK V +
Sbjct: 363 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 422
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L M G+ P + ++NTLI AY G++++ ++L +M GI D + +V+
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 482
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ K G++ A+ ++ ++ V+ + +Y+ +I A + A L+E++ G
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSA 542
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S+ YN L++ LC+ + +A L + ++ ++P + +Y +I C G + +A+ L+
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM + G+ P + C L++ V+ E L K + Y + + +
Sbjct: 603 QEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662
Query: 569 GDLSKLMELQKRFLRLGFA 587
+ SK+ L+K G A
Sbjct: 663 ENDSKVASLKKEMSEKGIA 681
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 179/374 (47%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + F ++L G +C+ LLNGL K + + QV+E + G+ P T
Sbjct: 310 TRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N L + +C+ D+ E+++ PD +TYN LI+ CK + A L
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + V P + T+ TL++ G++ + + M +G+ D++S+ +++ A+CK GK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ ++L +M+ + P+ I+ Y + G AL LV +++ GVS S Y+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ ++ A L+ + G P + YN ++ + C AL L EM
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I+P+L T L+ GR + L +ML + P S I ++++ Y ++ +K
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669
Query: 541 ALLGFFAKKFQIYD 554
+L ++K +D
Sbjct: 670 SLKKEMSEKGIAFD 683
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 187/422 (44%), Gaps = 2/422 (0%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI--GICPNT 240
VG + F + G +P + N ++ + +D + MGR P+
Sbjct: 135 VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDA 194
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++N++ ++G +++ + G P+ +TYNT+I + K G L F L
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQ 254
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M P++VTY L++GLC+ G++ E L M + PD +Y+ L + G+
Sbjct: 255 MLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGE 314
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
Q SL E + G+ +TC I++ G K+G++ A + L G+ + IY+
Sbjct: 315 SQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNT 374
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI CQ A + E++ P YN L+ LCK + V A L EM
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ PS+ T+ LI + G+ + +++ +M + G+ D ++ +C + +A
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
A+L K + + YN++ + + E GD + + L ++ G + + +T ++ L
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 601 WK 602
+
Sbjct: 555 CR 556
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 16/305 (5%)
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
LP L + L+ L G+ + F +V G PD ++N ++ A G + + +
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 367 LLYEM--MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+L M PD F+ +++ G + G+ AL + E+ GV+ +R Y+ +I
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ A L +++ DG P++ YN L+ LC+ + + L DEM ++ P
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298
Query: 485 LSTYRALICCFCGIGRSGEA---VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
TY L F G+ R+GE+ +SL E L+ G++ + C +L+NG C + V KA+
Sbjct: 299 GFTYSIL---FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQ 355
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM----ELQKRFLRLGFAPNNLTCKYMI 597
+ + T YN + N + + DL +++ R +R P+++T +I
Sbjct: 356 VFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR----PDHITYNALI 411
Query: 598 HSLWK 602
+ L K
Sbjct: 412 NGLCK 416
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 131/290 (45%), Gaps = 11/290 (3%)
Query: 102 CQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
CQ D A F +K+ I+P Y +++ L + A ++ E+ + D
Sbjct: 380 CQVRDLRGAFCIFEQMKSR-HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD-- 436
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
SV+ F LI AY G + + F G + ++S ++ K
Sbjct: 437 PSVETFNTLID-------AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + + ++M + PN +N + + ++GD ++ +EK++ G +VTYN
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNL 549
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ C+ ++++A L + + + PD+V+Y T+++ C +G +A +L M G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ P + + +TL+ A G++ + + L +M+ + P + I+V Y
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 9/223 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IK ++ +V N K A+ +L +++ KD + V+ +I AY+
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMI--YKDVAPNAQVYNSIID-------AYI 520
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++ K + G SIV+ N LL GL + + ID+ ++ + G+ P+
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++N + C GD DK L+++ + G P L T +TL+S+ GR++D LY+ M
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+NV P Y +++ + + L M +G++ D
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 210/420 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + ++ G QP +V+ N ++NG+ + + + +M + + T+
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + C++G +D +++E +G +VTYN+L+ CK G+ ND L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++P+++T+ L++ KEGK++EA++L+ M+ RG+SP+I++YNTL+ YC + ++ E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++L M+ N PD T +++GY R+ + + + + G+ + Y L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + G +P + Y L++ LC + AL + +++ +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C G+ +A +L + G+ P+ V+I+G C + +++A LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +YN + DGDL+ +L + GF+ + + K +I L G
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 4/405 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQC--WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
G +I + N ++N + C C + V ++ ++G P+T TFN L + C G V
Sbjct: 118 GIAHNIYTLNIMINCFCR--CCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVS 175
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
K ++++ E G PD+VTYN++++ C+ G + AF + R M RNV D+ TY+T++
Sbjct: 176 KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTII 235
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ LC++G + A LF M +G+ +V+YN+L+ CK GK + LL +M+ I
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ T +++ + KEG+L A L E+ G+S + Y+ L+ C NR A ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L+ + ++ P + + L++ C V D + + + R + + TY L+ FC
Sbjct: 356 LDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G+ A L EM+ G+LPD +L++G C + KA + K
Sbjct: 416 SGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y + + G + L G PN +T MI L K
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 139/268 (51%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+VK G ++E+ + +++ + G P+I++ N L++G N + + + + M R P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF L +C VD I + G + VTY+ L+ +C+ G++ A L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M VLPD++TY L++GLC GK+ +A ++F + + IV Y T+I CK
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK++++ +L + G+ P+ T +++ G K+G L A L+ +++ G + + Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGY 446
+ LI A +D A+ L+E + G+
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 156/343 (45%), Gaps = 1/343 (0%)
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D + F E I P LV ++ S+ + + N + + + ++ T +
Sbjct: 71 DAIALFQEMIRSRPL-PGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N C+ K A+ + +++ G PD ++NTLI C EGK+ ++ L+ M+ NG
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD T IV G + G A +++ +++ V Y +I +LC+D AA S
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L + + G S+ YN L+ LCK D LL +MV R I P++ T+ L+ F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ EA L EM+ G+ P+ L++GYCM+ +++A +L + D
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ ++ + + M++ + + G N +T ++
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQG 412
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++ N+ S A ML +V C + F LI Y
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIK-------GYC 379
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
V + + K FR G + V+ + L+ G + I ++++EM G+ P+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C NG ++K E +++ D +V Y T+I CK G++ DA+ L+ +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++TYT +++GLCK+G + EA+ L +M G +P+ +YNTLI A+ ++G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIV 387
S L+ EM G D + ++++
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVI 585
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 128/301 (42%), Gaps = 35/301 (11%)
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+DA L++ M R LP LV ++ + + + + ++ G++ +I + N +
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I +C+ K + S+L ++M G PDT T
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTT----------------------------- 160
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
++ LI LC + + A L++R+ ++G P + YN ++ +C+ + A
Sbjct: 161 ------FNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ +M +RN+K + TY +I C G A+SL EM G+ L+ G C
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
N LL + + + ++N + ++F ++G L + EL K + G +PN +
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 592 T 592
T
Sbjct: 335 T 335
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 206/471 (43%), Gaps = 71/471 (15%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G PS+ +CNF L+ L+K N ++C +V+ M G CP+ +F + + CK G ++
Sbjct: 181 GTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENA 239
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
K+E+ G P++VTYN +I+ C+ GRL++AF L M + V P+L TY L+NG
Sbjct: 240 IELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALING 299
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L K + + + M+ G +P++V +N LI YCK G ++ + + M+ I P
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD----------------------- 416
+ T ++QG+ K ++ A N + E+ G+SI D
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 419
Query: 417 ------------IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ L+ LC+D + AT L R+ + G S N L+ LC
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 479
Query: 465 SVADA-----------------------------------LLLKDEMVDRNIKPSLSTYR 489
+ +A L++EM R I+P + TY
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 539
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
L+ C +G+ +A+ L DE SG++ + +++ GYC + E L K
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ YN + ++G+++ ++L + G PN T +IH +
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 139/550 (25%), Positives = 229/550 (41%), Gaps = 79/550 (14%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L I P Y I++ L N + A ++ ++ VK ++ + LI+
Sbjct: 249 LGISPNVVTYNCIINGLCQNGRLDNAFELKEKMT--VKGVQPNLKTYGALIN-------G 299
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+K+ + + + GF P++V N L++G K+ I+ ++ + M I P
Sbjct: 300 LIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPT 359
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ T L FCK+ ++ LE+I G +++ CKK R + AF +
Sbjct: 360 SVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK 419
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR------------------------ 335
+M RN P + T L+ GLCK+GK EA +L+ R
Sbjct: 420 MMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAG 479
Query: 336 -----------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT-- 382
M+ RGL D ++YN LI +C EGK++ L EM GI PD +T
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 539
Query: 383 ------CQ---------------------------IIVQGYGKEGRLLSALNLVVELQRF 409
C I+++GY K R+ NL EL
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+ ++ +Y+ +I A CQ+ AA LLE + G +P+ Y+ L+ +C V DA
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L DEM P++ Y ALI +C +G+ A S EM+ + P+ V+I+G
Sbjct: 660 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 719
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
YC ++ KA LL + + D +YN + N F + D+ ++ + G +
Sbjct: 720 YCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVD 779
Query: 590 NLTCKYMIHS 599
+T ++H
Sbjct: 780 EITYTTLVHG 789
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 164/344 (47%), Gaps = 2/344 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + + L+ G S V+ N L++GL + + ++ +EM G+ + T+N L
Sbjct: 448 EATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALI 507
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FC G V+ E++ + G PD+ TYN L+ C G+L+DA L+ ++
Sbjct: 508 LGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLI 567
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
++ TY +M G CK ++ + LF+ ++ + + + + YN +I A+C+ G + + L
Sbjct: 568 SNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQL 627
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L M GI P+ T ++ G G + A +L+ E+++ G + Y LI C+
Sbjct: 628 LENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCK 687
Query: 428 -DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
A ++ LE I + + P+ Y +++ CK ++ A L +M + I P +
Sbjct: 688 LGQMDTAESTWLEMISFNIH-PNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 746
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
TY L FC A + D+M G+ D L++G+
Sbjct: 747 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 163/400 (40%), Gaps = 41/400 (10%)
Query: 240 THTFNILTHVFC---KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
T F++L HV+ +N + +G P L T N +SS K
Sbjct: 148 TQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCE 207
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++R+M PD+ ++T ++N LCK GK+ A +LF +M G+SP++V+YN +I C
Sbjct: 208 VFRVM-SEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLC 266
Query: 357 KEGKMQES-----------------------------------KSLLYEMMGNGIYPDTF 381
+ G++ + +L EM+G G P+
Sbjct: 267 QNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVV 326
Query: 382 TCQIIVQGYGKEGRLLSALNLV-VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
++ GY K G + AL + V + + S +Y L+ C+ ++ A + LE
Sbjct: 327 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS-LMQGFCKSDQIEHAENALEE 385
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
I G + ++ LCK A M+ RN +PS L+C C G+
Sbjct: 386 ILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGK 445
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L +LE G LI+G C + +A ++ ++ D +YNA
Sbjct: 446 HLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNA 505
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F +G + L++ + G P+ T +++ L
Sbjct: 506 LILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 545
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K I + F + L + + + N ++ + + Q+ E M GI P
Sbjct: 579 GYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILP 638
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L H C G V+ ++++ +EGF P++V Y LI YCK G+++ A +
Sbjct: 639 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTW 698
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M N+ P+ TYT +++G CK G + +A+ L +M G+ PD+V+YN L +CK
Sbjct: 699 LEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKA 758
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
M + + +M G+ D T +V G+
Sbjct: 759 NDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 197/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G LN
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 154/272 (56%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +++ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M+ +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLNEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA +L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L + G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 210/458 (45%), Gaps = 46/458 (10%)
Query: 162 SVDVFQDLISC-----TEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
SV VF+ + SC ++CN A K G E+ F + G +P I+S + +L+
Sbjct: 334 SVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLH 393
Query: 214 GLLKL--NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
G +C+ ++ M GI PN H FNIL + + + G +DK E ++ +G
Sbjct: 394 GYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 453
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY------------------ 313
PD VT+ T+ISS C+ GRL+DA + + M V P Y
Sbjct: 454 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 513
Query: 314 ------------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
++++N LCKEG+V E + MV G P++V++N+L+ Y
Sbjct: 514 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 573
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C G M+E+ +LL M GI P+ + +V GY K GR+ AL + ++ GV +
Sbjct: 574 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 633
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+Y ++ L Q R AA + + + G S+ Y ++ LC+ + +A +L ++
Sbjct: 634 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 693
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ N+K + T+ +I +GR EA L D + G++P+ Q ++I E+
Sbjct: 694 LFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEES 753
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+A+ L K D+ N + M +++K
Sbjct: 754 YEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAK 791
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 211/429 (49%), Gaps = 3/429 (0%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ +VK G + ++ F + ++ G P I+ CN ++ L K+ +D+ + ++M GI
Sbjct: 218 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 277
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T++++ CK+ +DK LE++ E G P+ +TYN+LI Y G N++ +
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY-- 355
++ M V+P + + ++ L K G+ EA +F MV +G PDI+SY+T++ Y
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYAT 397
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ + + ++ M+ GI P+ I++ Y + G + A+ + ++Q G+
Sbjct: 398 ATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 457
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+ +I +LC+ R A + G PS +Y L++ C + A L E
Sbjct: 458 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISE 517
Query: 476 MVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M++++I P + + ++I C GR E +MD M+++G P+ L+ GYC+
Sbjct: 518 MMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVG 577
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ +A ALL A + Y + + + ++G + + + + L G P ++
Sbjct: 578 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYS 637
Query: 595 YMIHSLWKG 603
++H L++
Sbjct: 638 IILHGLFQA 646
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 197/414 (47%), Gaps = 12/414 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L++ +++ D + + + G+ P+ +++ L + F K+G+VDK +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E+G P ++ N++I CK ++ A + + M + PDL TY+ +++GLCK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ +A ++ +MV G P+ ++YN+LI Y G ES + +M G+ P
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFG-----VSISRDIYDYLIVALCQDNRPFAATSL 437
C + K GR A + + G +S S ++ Y A D+ ++
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY---ATATDSCLADVHNI 409
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ G P+ ++N L+ + +C + A+L+ ++M ++ + P T+ +I C
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTE 556
IGR +A+ + M++ G+ P + LI G C ++ KA+ L+ K +
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 529
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS--LWKGMERKF 608
++++ N ++G +++ ++ ++ G PN +T ++ L ME F
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 583
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + ++N L K + + + + M + G PN TFN L +C G++++
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +P+ Y TL+ YCK GR++DA ++R M + V P V Y+ +++GL +
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G + I +Y ++ C+ E+ LL ++ + D T
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 705
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G+ + N ++ L VA A + + N+ ST L F G+
Sbjct: 766 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 825
Query: 503 EAVSLM 508
E + L+
Sbjct: 826 EHIKLL 831
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 15/339 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SVDVFQ 167
AL FN + D+ + P+ + Y ++ + + A +++ E++ KD P V F
Sbjct: 476 ALHKFNHMV-DIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN--KDIPPPGVKYFS 532
Query: 168 DLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
+I+ C E G + E + G +P++V+ N L+ G + +++ +
Sbjct: 533 SIINNLCKE---------GRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 583
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + M IGI PN + + L +CKNG +D + +G P V Y+ ++
Sbjct: 584 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 643
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ R A ++ M + TY ++ GLC+ EA+ L ++ + DI
Sbjct: 644 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 703
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+++N +I A K G+ QE+K L + G+ P+ T +++ KE A NL +
Sbjct: 704 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFIS 763
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ G + + ++++ L A++ L IG++
Sbjct: 764 VEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGEN 802
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 109/231 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L G +P+ V + +L+GL + +++ EM G
Sbjct: 607 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 666
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ ++ C+N D+ N LEK+ D++T+N +IS+ K GR +A L+
Sbjct: 667 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 726
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P++ TY+ ++ L KE EA LF + G + D N ++ +
Sbjct: 727 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 786
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ ++ + L + N + + T ++ + +EG+ + L+ +F
Sbjct: 787 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPAKYQF 837
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 26/208 (12%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP-HSVDVFQDLI---SCTEDCN 177
+KPTS Y +I+H L + + A KM E++E H+ V + +CT++ N
Sbjct: 629 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 688
Query: 178 W----------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
A KVG +E+ + F G P+I + + ++ L
Sbjct: 689 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 748
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K ++ ++ + + G ++ N + + +V K + +L I E +
Sbjct: 749 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 808
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYR 303
T + L S + ++G+ + L Y+
Sbjct: 809 STISLLASLFSREGKYREHIKLLPAKYQ 836
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 39/170 (22%)
Query: 479 RNIKPSLSTYRALICCF------------------CGIG-------------RSGE---A 504
R+ P++ TY LI C+ G+G + GE A
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 229
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L EM+E G+LP IC +I C K+++KAE+++ D +Y+ + +
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH-----SLWKGMERKFQ 609
+ + K + ++ + G PN++T +IH +W R F+
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/555 (25%), Positives = 249/555 (44%), Gaps = 50/555 (9%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR D+ +L FF + +P S+YC IVHIL+ + L ELV L K+
Sbjct: 108 LRLNPDA--SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNN 165
Query: 160 PHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
+ V+ +L+S + +++ + + G+ + + F G PS+ SCN
Sbjct: 166 YIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCN 225
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LL+ L++ + VYE+M +GI P+ ++ I+ + +CK G VD+ F++++E
Sbjct: 226 SLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS 285
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
+P++VTYN+LI Y G + A + +M + + + TYT L+ G CK G++ +A
Sbjct: 286 CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+L M+ + L D Y LI AYC G++ ++ + M+ G+ +T C ++ G
Sbjct: 346 EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K G + A ++V ++ + + Y+ L+ C+ A L + + G +
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKP-------------------------- 483
+ YN L+++L V AL + + M R + P
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 484 ---------SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
S++ Y +IC FC + + +A + +M E G PD R LI+GYC
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ +A L + TE YN++ +L KL L +PN +T
Sbjct: 586 NLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYG 645
Query: 595 YMIHSLW--KGMERK 607
+I W KGM K
Sbjct: 646 SLIAG-WCDKGMMDK 659
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 203/428 (47%), Gaps = 8/428 (1%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
VG + + + G P+ V+ LL+ K+ D+ ++++ G +
Sbjct: 479 VGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITL 538
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + FCK + + K++E GF PD +TY TLI YCK G L +A L +
Sbjct: 539 YNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSE 598
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + Y +L+ G+ + ++++ + L M +R LSP++V+Y +LI +C +G M
Sbjct: 599 RDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMD 658
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + ++M+ GI P+ IV + G++ A NL+ L + + + +
Sbjct: 659 KAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEA-NLI--LHQIADIDPIAAHAHSV 715
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLE---IYNELMESLCKCDSVADALLLKDEMVDR 479
D R +++ G+ + +YN + LCK ++ D + +++ +
Sbjct: 716 ELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLK 775
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P TY +LI +G+ EA L D+M+ +G++P+ + LING C ++++A
Sbjct: 776 GFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRA 835
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L A+K +YN + + + + G ++ +EL+ + G P+++T +IH
Sbjct: 836 RRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHG 895
Query: 600 LWKGMERK 607
L+ ME K
Sbjct: 896 LY--MEGK 901
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 190/421 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G + ++ + L VG + + V CN L+NG KL +++ +V M + P
Sbjct: 370 AYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKP 429
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++ +N L FCK D K +++ +G + +VTYNTL+ + G + A +++
Sbjct: 430 DSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIW 489
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M++R V P+ VTY TL++ K G A ++ + +G + I YNT+I +CK
Sbjct: 490 NLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKM 549
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ +++ + +M G PD T + ++ GY K G L+ AL L +R G+S S ++Y
Sbjct: 550 EKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMY 609
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI + + LL + P++ Y L+ C + A +M+D
Sbjct: 610 NSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMID 669
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ I P++ ++ G+ EA ++ ++ + + L + K
Sbjct: 670 KGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQK 729
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
G A I + YN + ++ + + L GF P+N T +IH
Sbjct: 730 IVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIH 789
Query: 599 S 599
+
Sbjct: 790 A 790
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 192/400 (48%), Gaps = 35/400 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ KVG + ++ L GF SI N ++ G K+ + Q +++ +M +G P
Sbjct: 510 AFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPP 569
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L +CK G++ + + E +G YN+LI+ + L L
Sbjct: 570 DEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLL 629
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + P++VTY +L+ G C +G + +A+ + +M+ +G++P+I+ + ++ + +
Sbjct: 630 AEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRH 689
Query: 359 GKMQESKSLLYEMMG-NGIYPDTFTCQI------------IVQGYGKEGRLLS-ALNLVV 404
GK+ E+ +L+++ + I + ++ IV +GK+ + + N+V
Sbjct: 690 GKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVY 749
Query: 405 ELQRFGVSISRDI-------YDYLIVALCQDNRPFA----ATSLLERIGQD--------- 444
+ G+ S++I D L+ C DN + A S + ++ +
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809
Query: 445 -GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G VP++ +YN L+ LCK ++ A L +++ + + P++ TY LI +C GR+ E
Sbjct: 810 AGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTE 869
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
A+ L D+M E G+ P S LI+G ME ++ LL
Sbjct: 870 ALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLL 909
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 198/429 (46%), Gaps = 44/429 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P YC ++ F AM + + L K S+ ++ +I +
Sbjct: 497 VAPNEVTYCTLLDAFFKVGTFDRAMMIWKD--ALSKGFTKSITLYNTMIC-------GFC 547
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ + ++ + F K ++GF P ++ L++G K+ + + ++ + R GI +T
Sbjct: 548 KMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTE 607
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L ++ ++ K+NG L +++ P++VTY +LI+ +C KG ++ A+ Y M
Sbjct: 608 MYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKM 667
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV------------------------ 337
+ + P+++ + +++ L + GK+ EA+ + H++
Sbjct: 668 IDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLET 727
Query: 338 --------HRGLSPDI---VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+ +S I + YN I CK + + + +L +++ G PD +T +
Sbjct: 728 QKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSL 787
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G++ A L ++ G+ + +Y+ LI LC+ A L ++ + G
Sbjct: 788 IHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGL 847
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ YN L++ CK +AL LKD+M + I PS TY LI G+S ++V
Sbjct: 848 SPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVG 907
Query: 507 LMDEMLESG 515
L++EM+++G
Sbjct: 908 LLNEMMKAG 916
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/575 (24%), Positives = 261/575 (45%), Gaps = 32/575 (5%)
Query: 49 YNFLPETQNPN---KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSD 105
Y F T PN K++DLI + D H +L L L H +S+++ +
Sbjct: 31 YPFPKTTPFPNLVFKVLDLIST-----DPHWPK-NPELNRLASTLRPHHVSKII-NTHIN 83
Query: 106 SVSALTFFNWV------KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
+ +AL FF W+ K+D+ + N + ILA + M C + +K
Sbjct: 84 TDTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELK-- 141
Query: 160 PHSVDVFQDLISCTEDCNWAYV------------KVGLIRESFKTFRKTLDVGFQPSIVS 207
V F IS ++ + + K ++ + + + G +PS+++
Sbjct: 142 --RVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLT 199
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N ++N L K + + V+ ++ + +CP+ T+ L C+N +DK +++
Sbjct: 200 FNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMV 259
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
++G +P+ VTY+TLI+ C +GR+ +A + M + + P + TYT ++ LC G+V
Sbjct: 260 KDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVD 319
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+A L M +G SP + +Y +I + GKM+ + + ++M+ G+ P+T T ++
Sbjct: 320 DAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALI 379
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
EGR AL + ++ G + Y+ +I L + A + ++ +DG
Sbjct: 380 NELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPS 439
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN L+ K + +A M + N +P TY LI FC G+ A S
Sbjct: 440 PTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSF 499
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EML+ G+ P+ +I+GYC E ++ A +L + E+YNA+ + ++
Sbjct: 500 FYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSK 559
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+ + + G PN +T +I+ L K
Sbjct: 560 GNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCK 594
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 176/359 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ + + G +P++ + ++ L + +D + MG+ G P+ T+
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + G ++ G K+ +EG P+ VTYN LI+ C +GR A ++ M
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
L + TY ++ GL + +A +F++M+ G SP +V+YNTLI K G +
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNN 460
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LY M + PD T ++ G+ K G+L SA + E+ + G+S ++ Y +I
Sbjct: 461 ATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMID 520
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C++ + A SL ER+ ++G S+E YN ++ L K + ++A +M ++ ++P
Sbjct: 521 GYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +LI C + A + EM + LP++ LI G C E V+ AE L
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL 639
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 199/464 (42%), Gaps = 49/464 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y +++ L + AM ML E+ E K +V + IS D +
Sbjct: 265 PNSVTYSTLINGLCNEGRIGEAMDMLEEMTE--KGIEPTVYTYTVPISSLCD-------I 315
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ R G PS+ + +++GL + ++ +Y +M + G+ PNT T+
Sbjct: 316 GRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTY 375
Query: 244 NILTHVFCKNG-----------------------------------DVDKVNGFLEKIEE 268
N L + C G D++K K+ +
Sbjct: 376 NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLK 435
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G P +VTYNTLI K+G LN+A +M N PD TY L++G CK GK+
Sbjct: 436 DGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDS 495
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A F+ M+ G+SP+ +Y +I YCKEGK+ + SL M NG T I+
Sbjct: 496 ATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIIS 555
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G K R A ++ G+ + Y LI LC++ A + + + +P
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ Y L+ LC+ V A + + + +P++ TY L+ C GRS EA L+
Sbjct: 616 NAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLV 671
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA-KKFQ 551
+ M E G+ P +I L+ +C V+ A + A K FQ
Sbjct: 672 ENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQ 715
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 4/350 (1%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F K L G P++V+ N L+ LK ++ + M P+ T+
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L FCK G +D F ++ + G P+ TY +I YCK+G+++ A L+ M
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ TY +++GL K + EA + +M +GL P+ ++Y +LI CK +
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ +EM P+ T ++ G +EG++ +A L G + D Y L+ L
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGL 658
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C++ R A+ L+E + + G PS+EIY L+ + CK V AL + + M + +P L
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
Y+ LIC CG+ R+ EA+++ +L+ D + VL++G E D
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 210/454 (46%), Gaps = 27/454 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLIS--CTEDCNWA 179
P+ Y I+ L K A+ M ++++ LV P++V + LI+ CTE
Sbjct: 335 PSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLV---PNTV-TYNALINELCTE----- 385
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
G + K F G + + N ++ GL ++ I++ V+ +M + G P
Sbjct: 386 ----GRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPT 441
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L K G ++ FL ++E +PD TY LIS +CK G+L+ A +
Sbjct: 442 VVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFY 501
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + P+ TYT +++G CKEGK+ A LF RM G S I +YN +I K
Sbjct: 502 EMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGN 561
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ E++ +M G+ P+T T ++ G K A + E+++ + Y
Sbjct: 562 RFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYT 621
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LCQ+ + AA ER+ ++G P+++ Y+ L+ LC+ +A L + M ++
Sbjct: 622 SLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK 677
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ PS+ Y +L+ C + A+ + + M G P I +VLI C V++A
Sbjct: 678 GLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC---GVSRA 734
Query: 540 EALLGFFA---KKFQIYDTESYNAVFNMFAEDGD 570
E L F KK D + + + ++GD
Sbjct: 735 EEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 147/326 (45%), Gaps = 39/326 (11%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L++G K +D + EM + GI PN T+ + +CK G +D E++EE G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ TYN +IS K R ++A M + + P+ +TYT+L+NGLCK A
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAF 602
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++FH M + P+ +Y +LI+ C+EGK+ ++ L NG P T +V G
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGL 658
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+EGR A LV ++ G+S S +IY L+VA C+ + A + + G+ P L
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718
Query: 451 EIYNELMESLCKCDSVADAL-----LLKDE------------------------------ 475
IY L+ +LC +AL LLK +
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYL 778
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRS 501
M RN PSL TY L +G+S
Sbjct: 779 MESRNCTPSLHTYIILARELSKVGKS 804
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 129/315 (40%), Gaps = 31/315 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + F + L G P+ + +++G K ID ++E M G
Sbjct: 486 GFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSA 545
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + K + F K+ E+G P+ +TY +LI+ CK N AF ++
Sbjct: 546 SIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIF 605
Query: 299 RIMYRRNVLPDLVTYT-------------------------------TLMNGLCKEGKVR 327
M ++N LP+ TYT TL++GLC+EG+
Sbjct: 606 HEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSN 665
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA QL M +GLSP + Y +L+ A+CK K+ + + M G P F ++++
Sbjct: 666 EASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLI 725
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
R ALN+ L + + ++ L+ L Q+ L +
Sbjct: 726 CALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCT 785
Query: 448 PSLEIYNELMESLCK 462
PSL Y L L K
Sbjct: 786 PSLHTYIILARELSK 800
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 128/325 (39%), Gaps = 40/325 (12%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ + + T F + I P Y ++ K A+ + + E C
Sbjct: 488 CKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE--NGCSA 545
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S++ + +IS K E+ K K + G QP+ ++ L+NGL K
Sbjct: 546 SIETYNAIIS-------GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTAT 598
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV-----NG--------------- 261
+ ++++ EM + PN HT+ L + C+ G VD NG
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGL 658
Query: 262 -----------FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+E ++E+G P + Y +L+ ++CK +++ A ++ +M + P L
Sbjct: 659 CREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
Y L+ LC + EA +F ++ + + D++ + L+ +EG LY
Sbjct: 719 FIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYL 778
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGR 395
M P T I+ + K G+
Sbjct: 779 MESRNCTPSLHTYIILARELSKVGK 803
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 50/251 (19%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P + Y +++ L N + A K+ E+ + K+C + + LI
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEK--KNCLPNAHTYTSLI----------- 624
Query: 182 KVGLIRES-FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
GL +E + + G +P+I + + L++GL + ++ Q+ E M G+ P+
Sbjct: 625 -YGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR- 299
+ L CK+ VD + +GF P L Y LI + C R +A +++
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS 743
Query: 300 ----------------------------------IMYRRNVLPDLVTYTTLMNGLCKEGK 325
+M RN P L TY L L K GK
Sbjct: 744 LLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
Query: 326 VREAHQLFHRM 336
Q+ +R+
Sbjct: 804 SIGTDQIGNRL 814
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 203/425 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+V+ G I + + + L++G + V+ N L+NG KL ++ ++ G P
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + C+N V ++ + +EG DPD+ TYN +++ CK G+L +A +
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R LPD+ T+ TL+ LC ++ EA L ++ +G+SPD+ ++N LI A CK
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + L EM +G PD T ++ G+L AL+L+ +++ G S Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LC+ R A + +++ G + +N L++ LCK + DA L ++M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P+ TY +++ +C G +A +++ M +G D LING C
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A +L K ++YN V ++ + L + +G P+ LT K +
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 599 SLWKG 603
L +G
Sbjct: 645 GLCRG 649
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 227/489 (46%), Gaps = 11/489 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + + ++ A+++ ++E+ C + LI+ Y
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM--GCSATKVTVNVLIN-------GYC 262
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ ++ + GF+P ++ N +NGL + + + +V + M + G P+
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NI+ + CKNG +++ G L ++ + G PD+ T+NTLI++ C RL +A L R +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ T+ L+N LCK G A +LF M + G +PD V+YNTLI C GK+
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL +M G T T I+ G K+ R+ A + ++ G+S + ++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+D + A L+ ++ +G P+ YN ++ CK + A + + M
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ + TY LI C GR+ A+ ++ M GM P + ++ ++ A +
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L A+ + D +Y VF G + + + + GF P + + + L
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
Query: 601 WK-GMERKF 608
GM+ F
Sbjct: 683 LNLGMDDYF 691
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 198/404 (49%), Gaps = 2/404 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + L+ G ++ I+ +V M +G T N+L + +CK G V+
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G++++ +GF+PD +TYNT ++ C+ + A + +M + PD+ TY ++N
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G++ EA + ++MV RG PDI ++NTLI A C +++E+ L ++ G+ PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I++ K G AL L E++ G + Y+ LI LC + A LL+
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G S YN +++ LCK + +A + D+M + I + T+ LI C
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTESY 558
+ +A L+++M+ G+ P++ ++ YC + D+ KA +L A F++ D +Y
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTY 569
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + G +++ + G P ++ SL++
Sbjct: 570 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 213/496 (42%), Gaps = 13/496 (2%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR Q D +AL N + P Y I+ L A+ ++ LV ++
Sbjct: 48 LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG----ALDLMKVLVAEMRRE 103
Query: 160 PHSVD--VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
H V V + E V LI + G Q V N LLN L++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL-----FGIQADTVVYNHLLNVLVE 158
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + VY EMG GI P+ TFN L C+ V LE++ G PD T
Sbjct: 159 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETT 218
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ TL+ + ++G + A + M VT L+NG CK G+V +A + +
Sbjct: 219 FTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G PD ++YNT + C+ + + ++ M+ G PD FT I+V K G+L
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A ++ ++ G ++ LI ALC NR A L ++ G P + +N L+
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+LCK AL L +EM + P TY LI C +G+ G+A+ L+ +M ES
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGC 457
Query: 518 PDSQIC-RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P S I +I+G C + + +AE + + + ++N + + +D + E
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517
Query: 577 LQKRFLRLGFAPNNLT 592
L + + G PNN+T
Sbjct: 518 LINQMISEGLQPNNIT 533
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 44/317 (13%)
Query: 328 EAHQLFHRMVHR---------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
E QLF V G+ D V YN L+ + KM+ +S+ EM GI P
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179
Query: 379 DTFT--------CQ---------------------------IIVQGYGKEGRLLSALNLV 403
D T C+ ++QG+ +EG + +AL +
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ G S ++ + LI C+ R A +++ DG+ P YN + LC+
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
D V AL + D MV P + TY ++ C C G+ EA ++++M++ G LPD
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI C + +A L K D ++N + N + GD + L +
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 584 LGFAPNNLTCKYMIHSL 600
G P+ +T +I +L
Sbjct: 420 SGCTPDEVTYNTLIDNL 436
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+P Y +I G + K L+ EM G + Y + A++
Sbjct: 71 APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130
Query: 402 LVV-ELQR-FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L++ +LQ FG+ +Y++L+ L + ++ S+ +G G P + +N LM++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC+ V A+++ +EM R + P +T+ L+ F G A+ + MLE G
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250
Query: 520 SQICRVLINGYCMEKDVNKAEALLGF----FAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
VLINGYC + + E LG+ A F+ D +YN N ++ + +
Sbjct: 251 KVTVNVLINGYC---KLGRVEDALGYIQQEIADGFE-PDQITYNTFVNGLCQNDHVGHAL 306
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ ++ G P+ T +++ L K
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCK 333
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 203/425 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+V+ G I + + + L++G + V+ N L+NG KL ++ ++ G P
Sbjct: 133 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 192
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + C+N V ++ + +EG DPD+ TYN +++ CK G+L +A +
Sbjct: 193 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 252
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R LPD+ T+ TL+ LC ++ EA L ++ +G+SPD+ ++N LI A CK
Sbjct: 253 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 312
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + L EM +G PD T ++ G+L AL+L+ +++ G S Y
Sbjct: 313 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 372
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LC+ R A + +++ G + +N L++ LCK + DA L ++M+
Sbjct: 373 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 432
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P+ TY +++ +C G +A +++ M +G D LING C
Sbjct: 433 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 492
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A +L K ++YN V ++ + L + +G P+ LT K +
Sbjct: 493 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 552
Query: 599 SLWKG 603
L +G
Sbjct: 553 GLCRG 557
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 227/489 (46%), Gaps = 11/489 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + + ++ A+++ ++E+ C + LI+ Y
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM--GCSATKVTVNVLIN-------GYC 170
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ ++ + GF+P ++ N +NGL + + + +V + M + G P+
Sbjct: 171 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 230
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NI+ + CKNG +++ G L ++ + G PD+ T+NTLI++ C RL +A L R +
Sbjct: 231 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 290
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ T+ L+N LCK G A +LF M + G +PD V+YNTLI C GK+
Sbjct: 291 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 350
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL +M G T T I+ G K+ R+ A + ++ G+S + ++ L
Sbjct: 351 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 410
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+D + A L+ ++ +G P+ YN ++ CK + A + + M
Sbjct: 411 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 470
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ + TY LI C GR+ A+ ++ M GM P + ++ ++ A +
Sbjct: 471 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 530
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L A+ + D +Y VF G + + + + GF P + + + L
Sbjct: 531 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590
Query: 601 WK-GMERKF 608
GM+ F
Sbjct: 591 LNLGMDDYF 599
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 198/404 (49%), Gaps = 2/404 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + L+ G ++ I+ +V M +G T N+L + +CK G V+
Sbjct: 119 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 178
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G++++ +GF+PD +TYNT ++ C+ + A + +M + PD+ TY ++N
Sbjct: 179 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 238
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G++ EA + ++MV RG PDI ++NTLI A C +++E+ L ++ G+ PD
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 298
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I++ K G AL L E++ G + Y+ LI LC + A LL+
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G S YN +++ LCK + +A + D+M + I + T+ LI C
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTESY 558
+ +A L+++M+ G+ P++ ++ YC + D+ KA +L A F++ D +Y
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTY 477
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + G +++ + G P ++ SL++
Sbjct: 478 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 521
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 182/394 (46%), Gaps = 2/394 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G Q V N LLN L++ + + VY EMG GI P+ TFN L C+ V
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE++ G PD T+ TL+ + ++G + A + M VT L+NG
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK G+V +A + + G PD ++YNT + C+ + + ++ M+ G PD
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
FT I+V K G+L A ++ ++ G ++ LI ALC NR A L
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P + +N L+ +LCK AL L +EM + P TY LI C +G
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLG 348
Query: 500 RSGEAVSLMDEMLESGMLPDSQIC-RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+ G+A+ L+ +M ES P S I +I+G C + + +AE + + + ++
Sbjct: 349 KLGKALDLLKDM-ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 407
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N + + +D + EL + + G PNN+T
Sbjct: 408 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 44/317 (13%)
Query: 328 EAHQLFHRMVHR---------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
E QLF V G+ D V YN L+ + KM+ +S+ EM GI P
Sbjct: 28 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 87
Query: 379 DTFT--------CQ---------------------------IIVQGYGKEGRLLSALNLV 403
D T C+ ++QG+ +EG + +AL +
Sbjct: 88 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 147
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ G S ++ + LI C+ R A +++ DG+ P YN + LC+
Sbjct: 148 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 207
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
D V AL + D MV P + TY ++ C C G+ EA ++++M++ G LPD
Sbjct: 208 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI C + +A L K D ++N + N + GD + L +
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327
Query: 584 LGFAPNNLTCKYMIHSL 600
G P+ +T +I +L
Sbjct: 328 SGCTPDEVTYNTLIDNL 344
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
FG+ +Y++L+ L + ++ S+ +G G P + +N LM++LC+ V
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+L+ +EM R + P +T+ L+ F G A+ + MLE G VLIN
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167
Query: 529 GYCMEKDVNKAEALLGF----FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
GYC + + E LG+ A F+ D +YN N ++ + +++ ++
Sbjct: 168 GYC---KLGRVEDALGYIQQEIADGFE-PDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 223
Query: 585 GFAPNNLTCKYMIHSLWK 602
G P+ T +++ L K
Sbjct: 224 GHDPDVFTYNIVVNCLCK 241
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 208/426 (48%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I F K L G+ P V+ N L+ GL + + ++++ G N
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK GD L KI+ P++ Y+T+I + CK +++A+ L+
Sbjct: 164 QVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 223
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + D+VTY+TL+ G C EGK++EA L + MV + ++P++ +YN L+ A CKEG
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+KS+L M+ + PD T ++ GY + A ++ + GV+ Y
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYT 343
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C++ A +L + + Q VP + Y+ L++ LCK + L DEM DR
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDR 403
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +LI C G A++L ++M + + P+ +L++G C + A
Sbjct: 404 GQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDA 463
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + K + +YN + N + G L + + + + G PN T + +I +
Sbjct: 464 QEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIA 523
Query: 600 LWKGME 605
L+K E
Sbjct: 524 LFKKDE 529
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 187/362 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K RK +P++ + +++ L K + + + ++ EM GI +
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + FC G + + G L ++ + +P++ TYN L+ + CK+G++ +A + +M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD++TY+TLM+G +V++A +F+ M G++PD+ +Y LI +CK +
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM + P T ++ G K GR+ +L+ E++ G Y L
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ A +L ++ P++ + L++ LCK + DA + +++ +
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 475
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
++ TY +I C G EA++++ +M ++G +P++ +I + + +KAE
Sbjct: 476 HLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEK 535
Query: 542 LL 543
LL
Sbjct: 536 LL 537
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 158/339 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K L+ E++ F + G +V+ + L+ G + + + EM I P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+NIL CK G V + L + + PD++TY+TL+ Y + A +++
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V PD+ TYT L+NG CK V EA LF M + + P IV+Y++LI CK
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ L+ EM G D T ++ G K G L A+ L +++ + + +
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+ R A + + + GY ++ YN ++ CK + +AL + +M D
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ T+ +I + +A L+ +M+ G+L
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 57/138 (41%)
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+V DA+ + M+ P + + ++ F + AVSL + G+ PD
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+LIN +C + ++L K+ DT + N + G + K + + L
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 585 GFAPNNLTCKYMIHSLWK 602
GF N ++ +I+ + K
Sbjct: 159 GFQLNQVSYATLINGVCK 176
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 203/425 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+V+ G I + + + L++G + V+ N L+NG KL ++ ++ G P
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N + C+N V ++ + +EG DPD+ TYN +++ CK G+L +A +
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R LPD+ T+ TL+ LC ++ EA L ++ +G+SPD+ ++N LI A CK
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + L EM +G PD T ++ G+L AL+L+ +++ G S Y
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITY 464
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LC+ R A + +++ G + +N L++ LCK + DA L ++M+
Sbjct: 465 NTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMIS 524
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P+ TY +++ +C G +A +++ M +G D LING C
Sbjct: 525 EGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQV 584
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A +L K ++YN V ++ + L + +G P+ LT K +
Sbjct: 585 ALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFR 644
Query: 599 SLWKG 603
L +G
Sbjct: 645 GLCRG 649
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 227/489 (46%), Gaps = 11/489 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + + ++ A+++ ++E+ C + LI+ Y
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM--GCSATKVTVNVLIN-------GYC 262
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ ++ + GF+P ++ N +NGL + + + +V + M + G P+
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NI+ + CKNG +++ G L ++ + G PD+ T+NTLI++ C RL +A L R +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ T+ L+N LCK G A +LF M + G +PD V+YNTLI C GK+
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL +M G T T I+ G K+ R+ A + ++ G+S + ++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+D + A L+ ++ +G P+ YN ++ CK + A + + M
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ + TY LI C GR+ A+ ++ M GM P + ++ ++ A +
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L A+ + D +Y VF G + + + + GF P + + + L
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
Query: 601 WK-GMERKF 608
GM+ F
Sbjct: 683 LNLGMDDYF 691
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 198/404 (49%), Gaps = 2/404 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + L+ G ++ I+ +V M +G T N+L + +CK G V+
Sbjct: 211 GVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDA 270
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
G++++ +GF+PD +TYNT ++ C+ + A + +M + PD+ TY ++N
Sbjct: 271 LGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G++ EA + ++MV RG PDI ++NTLI A C +++E+ L ++ G+ PD
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I++ K G AL L E++ G + Y+ LI LC + A LL+
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G S YN +++ LCK + +A + D+M + I + T+ LI C
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTESY 558
+ +A L+++M+ G+ P++ ++ YC + D+ KA +L A F++ D +Y
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV-DVVTY 569
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + G +++ + G P ++ SL++
Sbjct: 570 GTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFR 613
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 213/496 (42%), Gaps = 13/496 (2%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR Q D +AL N + P Y I+ L A+ ++ LV ++
Sbjct: 48 LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG----ALDLMKVLVAEMRRE 103
Query: 160 PHSVD--VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
H V V + E V LI + G Q V N LLN L++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL-----FGIQADTVVYNHLLNVLVE 158
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + VY EMG GI P+ TFN L C+ V LE++ G PD T
Sbjct: 159 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETT 218
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ TL+ + ++G + A + M VT L+NG CK G+V +A + +
Sbjct: 219 FTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G PD ++YNT + C+ + + ++ M+ G PD FT I+V K G+L
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A ++ ++ G ++ LI ALC NR A L ++ G P + +N L+
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+LCK AL L +EM + P TY LI C +G+ G+A+ L+ +M ES
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGC 457
Query: 518 PDSQIC-RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P S I +I+G C + + +AE + + + ++N + + +D + E
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517
Query: 577 LQKRFLRLGFAPNNLT 592
L + + G PNN+T
Sbjct: 518 LINQMISEGLQPNNIT 533
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 44/317 (13%)
Query: 328 EAHQLFHRMVHR---------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
E QLF V G+ D V YN L+ + KM+ +S+ EM GI P
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179
Query: 379 DTFT--------CQ---------------------------IIVQGYGKEGRLLSALNLV 403
D T C+ ++QG+ +EG + +AL +
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ G S ++ + LI C+ R A +++ DG+ P YN + LC+
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
D V AL + D MV P + TY ++ C C G+ EA ++++M++ G LPD
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI C + +A L K D ++N + N + GD + L +
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 584 LGFAPNNLTCKYMIHSL 600
G P+ +T +I +L
Sbjct: 420 SGCTPDEVTYNTLIDNL 436
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+P Y +I G + K L+ EM G + Y + A++
Sbjct: 71 APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130
Query: 402 LVV-ELQR-FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L++ +LQ FG+ +Y++L+ L + ++ S+ +G G P + +N LM++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC+ V A+L+ +EM R + P +T+ L+ F G A+ + MLE G
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250
Query: 520 SQICRVLINGYCMEKDVNKAEALLGF----FAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
VLINGYC + + E LG+ A F+ D +YN N ++ + +
Sbjct: 251 KVTVNVLINGYC---KLGRVEDALGYIQQEIADGFE-PDQITYNTFVNGLCQNDHVGHAL 306
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ ++ G P+ T +++ L K
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCK 333
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 195/412 (47%), Gaps = 23/412 (5%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKML----------------CELVELVKDCPHSVDVF 166
+ T +YC ++H+L + S A ++ ++E + VF
Sbjct: 10 RHTLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVF 69
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI+ AY++ G +R++ + +R T + F +C +L L+KL W
Sbjct: 70 SGLIT-------AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
YEE+ G + + FNIL H FCK GD+ I + G P +V++NTL++ Y
Sbjct: 123 FYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYI 182
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+ G L++ F L M+ V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGV 242
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
++ TLI +CK ++ + + +M+ + PD T ++ G K+G L A +L+ E+
Sbjct: 243 TFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ + Y LI C++ A +R+ Q+ Y L+ LC+
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRY 362
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
DA + EM+ +KP TY +I FC G L+ EM G +P
Sbjct: 363 LDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 414
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 166/306 (54%), Gaps = 9/306 (2%)
Query: 147 KMLCELVELVKDC--PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
K++ E + DC P S+ F L+ + K G IR + F G +PS
Sbjct: 118 KLVWGFYEEILDCGYPASLYFFNILMH-------RFCKEGDIRVAQLVFNAITKWGLRPS 170
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+VS N L+NG ++L +D+ +++ M G+ P+ +T+++L + CK +D NG +
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFD 230
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ ++G P+ VT+ TLI+ +CK R++ A +Y+ M +++ PDL+TY TL+ GLCK+G
Sbjct: 231 EMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+++AH L M +GL PD ++Y TLI CKEG ++ + M+ I D
Sbjct: 291 DLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYT 350
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G +EGR L A ++ E+ G+ Y +I C+ + + LL+ + +D
Sbjct: 351 ALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRD 410
Query: 445 GYVPSL 450
G+VPS+
Sbjct: 411 GHVPSV 416
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI+
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLV---PNGV-TFTTLIA-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + PD TYT ++N CK+G V +L M G P +VS
Sbjct: 371 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 138/353 (39%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFW 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + ++ G + +N L+ +CKEG ++ ++ +
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY + G L L + GV
Sbjct: 159 FNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQ--------------- 203
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+D+ + P+ T
Sbjct: 204 --------------------PDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVT 243
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C R A+ + +ML + PD LI G C + D+ +A L+ +
Sbjct: 244 FTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++GDL E +KR ++ +++ +I L
Sbjct: 304 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 356
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 121/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + + TC+ +++ K E+ G
Sbjct: 73 ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A + I + G PS+ +N LM + + +
Sbjct: 133 PASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + +A L DEML+ G++P+ LI G+C
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHC 252
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ V+ A + + D +YN + + GDL + +L G P+ +
Sbjct: 253 KNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 312
Query: 592 TCKYMI 597
T +I
Sbjct: 313 TYTTLI 318
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%)
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E I GY SL +N LM CK + A L+ + + ++PS+ ++ L+ + +
Sbjct: 125 EEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRL 184
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G E L M SG+ PD VLING C E ++ A L K + + ++
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTF 244
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ ++ + ME+ K+ L +P+ +T +I+ L K
Sbjct: 245 TTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 244/534 (45%), Gaps = 27/534 (5%)
Query: 88 PHLGAHEISRVLLRC--QSDSVSALTFFNWV----------------KNDLEIKPTSSNY 129
P LG ++R LLR ++ ++ A TF + ++L P + +Y
Sbjct: 140 PDLGPAFVAR-LLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISY 198
Query: 130 CLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRES 189
++ L +++ A+ M+ + + C V F +I + K G + ++
Sbjct: 199 NTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVI-------HGFFKQGEVSKA 251
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
F + + G P + + N +++ L K +D+ V +M G+ P+ T+N + H
Sbjct: 252 CNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHG 311
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
+ +G + K+ +G PD VT+++ +SS CK GR DA +++ M + +PD
Sbjct: 312 YSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 371
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+V+Y+ L++G EG+ + + LFH M +G+ + N LI A+ K G M E+ +
Sbjct: 372 IVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFT 431
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM G G+ P+ T ++ + + GRL A+ ++ G+ + +Y LI C
Sbjct: 432 EMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG 491
Query: 430 RPFAATSLLERIGQDG-YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A + + G + P++ ++ ++ SLC V DA + + ++ +P++ T+
Sbjct: 492 DLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTF 551
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+LI +C +G+ +A ++D M+ G+ PD L++GYC ++ L
Sbjct: 552 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLH 611
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K T +YN V + G S ++ + G A + T K ++ L +
Sbjct: 612 KKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 217/429 (50%), Gaps = 18/429 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYV 181
P +Y +++H A +F+ + + + +V +C H +++ LIS A+
Sbjct: 370 PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNC-HCINI---LIS-------AHA 418
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ F + G +P++V+ + L++ ++ + + + +M IGI PNT
Sbjct: 419 KRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTA 478
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++ L H FC +GD+ K F+ ++ +G P++V ++++I S C +GR+ DA ++ +
Sbjct: 479 VYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ P +VT+ +L++G C GK+ +A + MV G+ PD+V+ NTL+ YCK GK
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGK 598
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + L EM+ + P T T I++ G + GR +A + E+ G ++ D Y
Sbjct: 599 IDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKI 658
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+++ A +L ++G + I N ++ +L K +A L +
Sbjct: 659 LLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSG 718
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P++STY +I G EA ++ M +SG P S++ +I + D+ KA
Sbjct: 719 LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA- 777
Query: 541 ALLGFFAKK 549
G++ K
Sbjct: 778 ---GYYMSK 783
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 227/528 (42%), Gaps = 50/528 (9%)
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
K ++P +G + S V C++ ++ F D ++P Y I+H + + +
Sbjct: 261 KGVVPDVGTYN-SIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWK 319
Query: 144 FAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
+ KM ++ L+ D F +S + K G +++ + F+ G
Sbjct: 320 ESAKMFRKMTSKGLIPD----TVTFSSFMS-------SLCKHGRSKDAEEIFQYMTTKGH 368
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P IVS + LL+G ++ M GI N H NIL K G +D+
Sbjct: 369 MPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAML 428
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG-- 319
+++ +G P++VTY+TLIS++C+ GRL DA + M + P+ Y +L++G
Sbjct: 429 VFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFC 488
Query: 320 ----------------------------------LCKEGKVREAHQLFHRMVHRGLSPDI 345
LC EG+V +A +F+ ++H G P I
Sbjct: 489 MHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTI 548
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++N+LI YC GKM+++ +L M+ GI PD T +V GY K G++ L L E
Sbjct: 549 VTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFRE 608
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ V + Y+ ++ L + R AA + + G ++ Y L++ LC+ D
Sbjct: 609 MLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDL 668
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+A+ L ++ + K ++ +I + R EA L + SG++P+ V
Sbjct: 669 TDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGV 728
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+I E V +A+ + K + N + M + GD+ K
Sbjct: 729 MIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVK 776
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P+IV + +++ L + V+ + IG P TFN L +C G ++K G
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L+ + G +PD+VT NTL+S YCK G+++D L+R M + V P VTY +++GL
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+ G+ A ++FH M+ G + DI +Y L+ C+ E+ +L +++ D
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ K R A +L + G+ + Y +I L ++ A ++ +
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G PS + N+++ L + + A ++ I ST L+ F G+
Sbjct: 750 EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKH 809
Query: 502 GEAVSLM 508
E + +
Sbjct: 810 REQIKFL 816
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 159/399 (39%), Gaps = 17/399 (4%)
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNIL--------THVFCKNGDVDKVNGFLEKIEEEGF 271
C D +++E+ R G + + N V C NG V +I E
Sbjct: 57 CTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPA-LVLALFNRICREEA 115
Query: 272 DPDLV-----TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
P + TY L+ C+ R + + R + + TT + LC +
Sbjct: 116 GPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRT 175
Query: 327 REA-HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTC 383
EA L HRM PD +SYNT+I + C + + QE+ ++ M G PD +
Sbjct: 176 DEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSF 235
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ K+G + A NL E+ + GV Y+ ++ ALC+ A +L ++
Sbjct: 236 NTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVD 295
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P YN ++ ++ + +M + + P T+ + + C GRS +
Sbjct: 296 KGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKD 355
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A + M G +PD +L++GY E L A K + + N + +
Sbjct: 356 AEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILIS 415
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A+ G + + M + G PN +T +I + +
Sbjct: 416 AHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCR 454
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I + FR+ L +P+ V+ N +L+GLL+ +++ EM G
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL C+N D+ K+ D+ NT+I++ K R +A L+
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P++ TY ++ L KEG V EA +F M G +P N +I ++
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 771
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
G + ++ + ++ G I + T +++ + +G+
Sbjct: 772 GDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 96/239 (40%), Gaps = 12/239 (5%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEIS-RVLLRCQSDSVSALT 111
P+ N +V C S K D + + K + P + I LLR S +
Sbjct: 581 PDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F + + + + Y +++ L N+ A+ + +L + DC + + +I+
Sbjct: 641 FHEMIDSGTAVDIDT--YKILLKGLCRNDLTDEAITLFHKLGAM--DCKFDITILNTMIN 696
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
A KV E+ F G P++ + ++ LLK +++ ++ M
Sbjct: 697 -------ALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
+ G P++ N + + + GD+ K ++ K++ + T + L+S + KG+
Sbjct: 750 EKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 197/397 (49%), Gaps = 11/397 (2%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN----- 177
T +YC ++H+L + S A K L ++V K + VF ++ T+ +
Sbjct: 1 TLDSYCTMIHLLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFS 59
Query: 178 ---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY++ G +R++ + +R T + F +C +L L+KL W YEE+
Sbjct: 60 GLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILEC 119
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G + + FNIL H FCK GD+ I + G P +V++NTL++ Y + G +++
Sbjct: 120 GYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEG 179
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F L M+ V PD+ TY+ L+NGLCKE K+ +A+++F M+ +GL P+ V++ TLI
Sbjct: 180 FRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDG 239
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 240 HCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPD 299
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ Y LI C++ A +R+ Q+ Y L+ LC+ + DA +
Sbjct: 300 KITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLR 359
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
EM+ +KP TY +I FC G L+ EM
Sbjct: 360 EMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 127/229 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+++G + E F+ G QP + + + L+NGL K + +D ++++EM G+ P
Sbjct: 169 GYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVP 228
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TF L CKNG VD +++ + PDL+TYNTLI CKKG L A L
Sbjct: 229 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLI 288
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD +TYTTL++G CKEG + A + RM+ + D V+Y LI C+E
Sbjct: 289 DEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQE 348
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+ +++ +L EM+ G+ PDT T +I+ + K+G + + L+ E+Q
Sbjct: 349 ERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 146/341 (42%), Gaps = 38/341 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 54 DIYVFSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CKEG + A +F+ + GL P +VS+NTL+ Y +
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M E L M +G+ PD +T +++ G KE ++ A + E+ G+ + +
Sbjct: 174 GDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTF 233
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ P L YN L+ LCK + A L DEM
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 293
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E+
Sbjct: 294 KGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLD 353
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL---SKLME 576
AE +L DT +Y + N F + GD+ SKL++
Sbjct: 354 AEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLK 394
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 198/401 (49%), Gaps = 6/401 (1%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++S T N + K G +++ T+ + LD P +V+ + ++ L K +D+ +V
Sbjct: 195 DVVSYTTVIN-GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEV 253
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI-----EEEGFDPDLVTYNTLI 282
M + G+ PN T+ + H +C +G + GFL+K+ E +G +PD+ TY TL+
Sbjct: 254 LTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLL 313
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
Y KG L L +M R + PD Y L+ K+GKV EA +F +M +GL+
Sbjct: 314 QGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLN 373
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD V+Y +I CK G+++++ +M+ G+ P ++ G + A L
Sbjct: 374 PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 433
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
++E+ G+ ++ ++ +I + C++ R + L + + + G P + Y+ L++ C
Sbjct: 434 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 493
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A+ L MV +KP+ TYR LI +C I R G+A+ L EM SG+ PD
Sbjct: 494 AGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIIT 553
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
+++ G + A+ L + + +YN + +
Sbjct: 554 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILH 594
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 205/466 (43%), Gaps = 54/466 (11%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCP 160
+ DS A + ++ + D I P Y I+ L AM++L +V+ ++ +C
Sbjct: 209 EGDSGKAYSTYHEML-DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG-----FQPSIVSCNFLLNGL 215
+ Y G +E+ +K G +P I + LL G
Sbjct: 268 TYTSIMH-----------GYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGY 316
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ + + M R GI P+ + +NIL + K G VD+ K+ ++G +PD
Sbjct: 317 ATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDA 376
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC-------------- 321
VTY +I CK GR+ DA + M + P + Y +L++GLC
Sbjct: 377 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 436
Query: 322 ---------------------KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
KEG+V E+ +LF MV G+ PDI++Y+TLI YC GK
Sbjct: 437 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 496
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M E+ LL M+ G+ P+T T + ++ GY K R+ AL L E++ GVS Y+
Sbjct: 497 MDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNI 556
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L Q R AA L RI + G L YN ++ LCK DAL + + +
Sbjct: 557 ILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 616
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+K T+ +I +GR+GEA L +G++P+ R++
Sbjct: 617 LKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 207/454 (45%), Gaps = 24/454 (5%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+V + LI C C + +G F + GF+ ++ LL GL C
Sbjct: 86 TVHTYAILIGCC--CRADRLDLG-----FAALGNVVKKGFRVEAITFTPLLKGL----CA 134
Query: 222 DQCWQ-----VYEEMGRIGICPNTHTFNILTHVFC---KNGDVDKVNGFLEKIEEEGFDP 273
D+ V M + P+ + IL C ++ + ++ + G P
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAP 194
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+V+Y T+I+ + K+G A+ Y M R + PD+VTY++++ LCK + +A ++
Sbjct: 195 DVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI-----IVQ 388
MV G+ P+ +Y +++ YC G+ +E+ L ++ +G+ PD I ++Q
Sbjct: 255 TSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQ 314
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY +G L+ L+ + R G+ +Y+ LI A + + A + ++ Q G P
Sbjct: 315 GYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP 374
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
Y ++ LCK V DA+L ++M+D + P Y +LI C + A L+
Sbjct: 375 DAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 434
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EML+ G+ ++ +I+ +C E V ++E L + D +Y+ + + +
Sbjct: 435 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 494
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + + M+L + +G PN +T + +I+ K
Sbjct: 495 GKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCK 528
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 180/387 (46%), Gaps = 21/387 (5%)
Query: 64 LICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
LIC+ K+G +L Q L P GA + + C+S V A+ +F +
Sbjct: 347 LICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA----VIGILCKSGRVEDAMLYFEQM 402
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
++ + P + Y ++H L NK+ A +++ E+++ C +++ F +I
Sbjct: 403 IDE-GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTI-FFNSIID----- 454
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ K G + ES K F + +G +P I++ + L++G +D+ ++ M +G+
Sbjct: 455 --SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGL 512
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PNT T+ L + +CK + +++E G PD++TYN ++ + R A
Sbjct: 513 KPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 572
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
LY + +L TY +++GLCK +A ++F + L + ++N +I A
Sbjct: 573 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 632
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+K L NG+ P+ +T +++ + +G L L + ++ G ++
Sbjct: 633 KVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 692
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQ 443
+ ++++ L Q A + L I +
Sbjct: 693 MLNFIVRELLQRGEITRAGTYLSMIDE 719
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 7/180 (3%)
Query: 431 PFAATSLLERIGQDG---YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P AA S R+ + G P++ Y L+ C+ D + +V + + T
Sbjct: 65 PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAIT 124
Query: 488 YRALICCFCGIGRSGEAVSL-MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+ L+ C R+ +A+ + + M E +PD C +L+ G C E +A L
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMM 184
Query: 547 AKK---FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
A D SY V N F ++GD K L +P+ +T +I +L KG
Sbjct: 185 ADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 185/364 (50%), Gaps = 14/364 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+ K + + GF+P++V+ L+ G + D + + +EM + G+
Sbjct: 445 GYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSC 504
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+N+L + C V +V+G L+ EGF P ++TYN++I+ + K G + AF +Y
Sbjct: 505 NDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVY 564
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P+++TYT+ ++G C+ G A ++ + + RGL PDIV+YN LI +C+E
Sbjct: 565 QQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQE 624
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-------GV 411
G M + LL ++ +G+ P+T ++ GY LN++ E+ +F G+
Sbjct: 625 GNMSHALQLLVILLKDGLAPNTVVYNSLITGYKN-------LNMMKEVSKFYESMIKGGI 677
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
Y LI +D A L + GY+P + L LC+ + A
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L +EM +++P++ Y LI + + EA L DEML G+ PD +L++
Sbjct: 738 LLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797
Query: 532 MEKD 535
+E D
Sbjct: 798 LEAD 801
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 227/518 (43%), Gaps = 47/518 (9%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD-CPHSVDVFQDLISCTEDCNWA 179
EI P Y L + L A++ML E+ E+ D C + D++
Sbjct: 222 EIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVL--------- 272
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
VK G + E+ + + D G + ++ L+ G + +++E + GI P
Sbjct: 273 -VKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ +L + G K ++ +G P + ++ R DA L+
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFE 391
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M LPD+ TY L++ C+ K+REA LF RM G+ P I +YN+L+ YCK+G
Sbjct: 392 EMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKG 450
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
M E+ L EM G P+ T +++GY + +A L+ E+++ GVS + Y+
Sbjct: 451 CMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYN 510
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI +C +R +L+ +G++P++ YN ++ K + A + +M ++
Sbjct: 511 VLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREK 570
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P++ TY + I +C G S A+ +++++ G+ PD LING+C E +++ A
Sbjct: 571 GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630
Query: 540 EALLGFFAK---------------------------KFQ--------IYDTESYNAVFNM 564
LL K KF + DT +Y + +
Sbjct: 631 LQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F++DG+++ +EL + G+ P+ T + H L +
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCR 728
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 188/400 (47%), Gaps = 1/400 (0%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + D G P + + N L++ + + + + +++ M + G+ P+ +T+N L +CK
Sbjct: 390 FEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G +D+ ++ EGF P++VTY TL+ Y K ++A+ L M + V + T
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYT 508
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y L+NG+C +V E + + G P +++YN++I + K G M + ++ +M
Sbjct: 509 YNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMR 568
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ P+ T + GY + G AL ++ +++R G+ Y+ LI CQ+
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMS 628
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A LL + +DG P+ +YN L+ + + + + M+ I STY LI
Sbjct: 629 HALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLI 688
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
F G A+ L EM+ G +PD+ L +G C D++ A+ LL +
Sbjct: 689 DGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVR 748
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ YN + N + D L + L L +G P++ T
Sbjct: 749 PNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTT 788
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 190/408 (46%), Gaps = 5/408 (1%)
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+++ F + G++ + L++ LK + ++++EM I P+ + +
Sbjct: 174 KDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALA 233
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
CK GD + L +++E GFD TY T++ K GR+ +A + M
Sbjct: 234 ITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGK 293
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
D++ TTLM G C +V A LF + G+ P V Y LI + G Q++
Sbjct: 294 KMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYE 353
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVA 424
L +M G G+ P TF ++++G + R A+ L E+ G+ D++ Y LI
Sbjct: 354 LCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP---DVFTYNNLIHW 410
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
CQ ++ A +L +R+ + G PS+ YN L+ CK + +A+ L EM KP+
Sbjct: 411 HCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPN 470
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ TY L+ + A +L+DEM ++G+ + VLING CM V + + +L
Sbjct: 471 VVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLK 530
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
F + I +YN++ N F + G + + ++ G PN +T
Sbjct: 531 SFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIIT 578
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 132/324 (40%), Gaps = 1/324 (0%)
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G PD+ + L+ + DA L+ M R D + LM+ KEG +
Sbjct: 151 RGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHED 210
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +LF M + PD Y I A CK G + +L EM G FT + +V
Sbjct: 211 AVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVD 270
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K GR+ AL + E++ G + + L+ C A +L + +DG VP
Sbjct: 271 VLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ +Y L+ + A L +M + + PS ++ R +AV L
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EM +SG LPD LI+ +C + +A L K +YN++ + +
Sbjct: 391 EEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449
Query: 569 GDLSKLMELQKRFLRLGFAPNNLT 592
G + + ++L GF PN +T
Sbjct: 450 GCMDEAVKLYSEMPMEGFKPNVVT 473
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 120/292 (41%), Gaps = 1/292 (0%)
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y M R V+PD+ + T L+ + ++A LF M RG D ++ L+ A K
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLK 204
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
EG +++ L EM G I PD + + K G AL ++ E++ G
Sbjct: 205 EGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFT 264
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y ++ L + R A + + + G + + LM C V +AL L E +
Sbjct: 265 YRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL 324
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
I P+ Y LI +G + +A L +M G+LP + +++ G ++
Sbjct: 325 KDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L A + D +YN + + + L + + L R + G P+
Sbjct: 385 DAVCLFEEMADS-GLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%)
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + MV RG+ PDI S L+ + +++ +L EM G G D + ++
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS 200
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
KEG A+ L E+ + + +Y I ALC+ A +L + + G+
Sbjct: 201 ACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDT 260
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
Y +++ L K + +AL + DEM D K + L+ +C G A++L
Sbjct: 261 CDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320
Query: 509 DEMLESGMLPDSQICRVLING 529
E L+ G++P + VLI G
Sbjct: 321 KETLKDGIVPTKVMYGVLIRG 341
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 212/447 (47%), Gaps = 30/447 (6%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
SF ++ C E++++ HS+ E+ F ++
Sbjct: 29 LSFWVRAFCNYREILRNGLHSLQ---------------------FNEALDLFSHMVESRP 67
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
PSI+ LLN + K+ D + + + +G+ + +T N+L + FC++ +
Sbjct: 68 LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASS 127
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
FL K+ + GF+PD+ T+ +LI+ +C R+ +A + M + PD+V YTT+++ LC
Sbjct: 128 FLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLC 187
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K G V A LF++M + G+ PD+V Y +L+ C G+ +++ LL MM I PD
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ + KEG+LL A L E+ + ++ + Y LI LC + R A + +
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G P + Y L+ CKC V DA+ + EM + + + TY LI F +G+
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI----YDTES 557
A + M+ G+ P+ + VL++ C VNKA + K+ +I + +
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKR-EIDGVPPNIRT 426
Query: 558 YNAVFNMFAEDGDLSKLM----ELQKR 580
YN + + +G L K + ++QKR
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKR 453
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 174/348 (50%), Gaps = 3/348 (0%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +GF+P I + L+NG N I++ + +M +GI P+ + + CKNG
Sbjct: 131 KLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNG 190
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
VD ++E G PD+V Y +L++ C GR DA L R M +R + PD++T+
Sbjct: 191 HVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ KEGK+ +A +L++ M+ ++P+I +Y +LI C EG++ E++ + Y M
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G +PD ++ G+ K ++ A+ + E+ + G++ + Y LI +P A
Sbjct: 311 GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI---KPSLSTYRAL 491
+ + G P++ YN L+ LC V AL++ ++M R I P++ TY L
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ C G+ +A+ + +M + M ++I G C V A
Sbjct: 431 LHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDA 478
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 188/361 (52%), Gaps = 3/361 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ + +++G +P +V +++ L K +D ++ +M GI P+ +
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + C +G + L + + PD++T+N LI ++ K+G+L DA LY M + +
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P++ TYT+L+NGLC EG++ EA Q+F+ M +G PD+V+Y +LI +CK K++++
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ YEM G+ +T T ++QG+G G+ A + + GV + Y+ L+ L
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396
Query: 426 CQDNRPFAATSLLERIGQ---DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C + + A + E + + DG P++ YN L+ LC + AL++ +M R++
Sbjct: 397 CYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMD 456
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +I C G+ +A++L + G+ P+ +I+G E + +A L
Sbjct: 457 IGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVL 516
Query: 543 L 543
Sbjct: 517 F 517
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ + L++ K + + L + + V DL T LMN C+ + A
Sbjct: 69 PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSF 128
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+++ G PDI ++ +LI +C +++E+ S++ +M+ GI PD I+ K
Sbjct: 129 LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCK 188
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + +AL+L +++ +G+ +Y L+ LC R A LL + + P +
Sbjct: 189 NGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT 248
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+++ K + DA L +EM+ +I P++ TY +LI C GR EA + M
Sbjct: 249 FNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME 308
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G PD LING+C K V A + ++K +T +Y + F G +
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
E+ + G PN T ++H L
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCL 396
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 145/311 (46%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ N+A L+ M LP ++ +T L+N + K K L + G+S D+ + N
Sbjct: 51 QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
L+ +C+ + + S L ++M G PD FT ++ G+ R+ A+++V ++
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ IY +I +LC++ A SL ++ G P + +Y L+ LC DA
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
LL M+ R IKP + T+ ALI F G+ +A L +EM++ + P+ LING
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
CME +++A + K D +Y ++ N F + + M++ + G N
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350
Query: 590 NLTCKYMIHSL 600
+T +I
Sbjct: 351 TITYTTLIQGF 361
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 14/348 (4%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V +AL+ FN ++N I+P Y +V+ L + ++ A +L +++ +
Sbjct: 187 CKNGHVDNALSLFNQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK--RKIK 243
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
V F LI A+VK G + ++ + + + + + P+I + L+NGL
Sbjct: 244 PDVITFNALID-------AFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ Q++ M G P+ + L + FCK V+ ++ ++G + +TY T
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTT 356
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR- 339
LI + G+ N A ++ M R V P++ TY L++ LC GKV +A +F M R
Sbjct: 357 LIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKRE 416
Query: 340 --GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ P+I +YN L+ C GK++++ + +M + T II+QG K G++
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
ALNL L GV + Y +I L ++ A L ++ +DG
Sbjct: 477 DALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 19/334 (5%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTL---LQNDLKPLLPHLGAHEISRVLLRCQSD 105
Y P+ +V+ +C+S + D+ L L ++ +KP + A + V +
Sbjct: 205 YGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVK---EGK 261
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
+ A +N + + I P Y +++ L + A +M L+E K C
Sbjct: 262 LLDAKELYNEMI-QMSIAPNIFTYTSLINGLCMEGRLDEARQMF-YLME-TKGC------ 312
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F D+++ T N + K + ++ K F + G + ++ L+ G + +
Sbjct: 313 FPDVVAYTSLIN-GFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ 371
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE---KIEEEGFDPDLVTYNTLI 282
+V+ M G+ PN T+N+L H C NG V+K E K E +G P++ TYN L+
Sbjct: 372 EVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLL 431
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
C G+L A ++ M +R++ ++TYT ++ G+CK GKV++A LF + +G+
Sbjct: 432 HGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVK 491
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
P++V+Y T+I +EG M E+ L +M +G+
Sbjct: 492 PNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + F G P +V+ L+NG K ++ +++ EM + G+ NT T+
Sbjct: 295 GRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITY 354
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L F G + + G P++ TYN L+ C G++N A ++ M +
Sbjct: 355 TTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQK 414
Query: 304 R---NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
R V P++ TY L++GLC GK+ +A +F M R + I++Y +I CK GK
Sbjct: 415 REIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGK 474
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
++++ +L + G+ P+ T ++ G +EG +L A L +++ GVS
Sbjct: 475 VKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 20/251 (7%)
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSA-------LNLVVELQRFGV----------- 411
E++ NG++ F + + + E R L + LN++ ++++F V
Sbjct: 41 EILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100
Query: 412 SISRDIY--DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+S D+Y + L+ CQ ++P A+S L ++ + G+ P + + L+ C + + +A
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ + ++MV+ IKP + Y +I C G A+SL ++M G+ PD + L+NG
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C A+ LL K+ D ++NA+ + F ++G L EL +++ APN
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280
Query: 590 NLTCKYMIHSL 600
T +I+ L
Sbjct: 281 IFTYTSLINGL 291
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 206/437 (47%), Gaps = 21/437 (4%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SV 163
D+ AL FFNW + ++ T +Y ++ IL N + A L + + +
Sbjct: 91 DTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEA 149
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
F L+ + + GL +ES K F G PS+V+ N LL LLK +
Sbjct: 150 RFFNSLMR-------NFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNM 202
Query: 224 CWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+VY+EM G+ P+T TFNIL FC NG VD + G +PD+VTYNTL+
Sbjct: 203 AKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLV 262
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNV--LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
C+ G++ A+ + + M +++V P++VTYTTL+ G C + ++ +A +F MV++G
Sbjct: 263 DGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQG 322
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSA 399
L + ++YNTLI C+ K ++ K +L G+G + PDT T ++ + G L A
Sbjct: 323 LKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDA 382
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER-------IGQDGYVPSLEI 452
L + + + Y L+ +LCQ A LL++ + DG P +
Sbjct: 383 LKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAA 442
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN + + LC+ A +++ R + S Y+ LI C G L+ ML
Sbjct: 443 YNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS-YKTLIMGHCKEGTFESGYELLVLML 501
Query: 513 ESGMLPDSQICRVLING 529
PD + LING
Sbjct: 502 RKDFXPDFETYESLING 518
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 192/432 (44%), Gaps = 26/432 (6%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
V P++V+ L+ G I++ V+EEM G+ N T+N L C+ +K
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEK 345
Query: 259 VNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ LE +G F PD T+NTL+ +C G L+DA ++ M + PD TY+ L+
Sbjct: 346 IKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALV 405
Query: 318 NGLCKEGKVREAHQLFHRMVHR-------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
LC+ G +A L +++ R G P + +YN + C+ GK ++++ +
Sbjct: 406 RSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQ 465
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
+M G D + + ++ G+ KEG S L+V + R + Y+ LI L ++
Sbjct: 466 LMRRGT-QDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDK 524
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
P A LE++ + + P+ ++ ++ L + +++ L M+D+NI+ +LS
Sbjct: 525 PLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTG 584
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
+ G G + +A L+ + G S LI C + V + LL F +
Sbjct: 585 CVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCHCRKVIQGSKLLLFSLESH 641
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI------------- 597
Q D + N V E LS+ L + + +G L+C+ +
Sbjct: 642 QFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMG-VHQQLSCQNQLKVSLKAGGKLEEA 700
Query: 598 HSLWKGMERKFQ 609
S+ K MER+ +
Sbjct: 701 ESVQKRMERRLK 712
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 169/369 (45%), Gaps = 12/369 (3%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIM 301
FN L F + G + ++ G P +VT+N+L++ K+GR N A +Y ++
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD T+ L+ G C G V + ++F+ + G PD+V+YNTL+ C+ GK+
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271
Query: 362 QESKSLLYEMMGNGI--YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ +++ M + P+ T +++GY + + AL + E+ G+ + Y+
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331
Query: 420 YLIVALCQDNRPFAATSLLERIGQDG-YVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ + +LE DG + P +N LM C ++ DAL + + M +
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY-------C 531
I+P +TY AL+ C G +A L+D++LE +L C+ L+ Y C
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLC 451
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
KAE ++ D SY + ++G EL LR F P+
Sbjct: 452 ETGKTKKAEKAFRQLMRR-GTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFE 510
Query: 592 TCKYMIHSL 600
T + +I+ L
Sbjct: 511 TYESLINGL 519
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 146/358 (40%), Gaps = 50/358 (13%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D F P + N L++ +D +V+E M + I P++ T++ L C+ G +
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415
Query: 258 KVNGFLEKIEE-------EGFDPDLVTYN------------------------------- 279
K L+K+ E +G P + YN
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP 475
Query: 280 ---TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TLI +CK+G + L +M R++ PD TY +L+NGL K A Q +M
Sbjct: 476 SYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKM 535
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD---TFTCQIIVQGYGKE 393
+ P+ ++++++ ++G+ ES SL+ M+ I + + C ++ G G
Sbjct: 536 LRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMN 595
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+ A LV L G S+ + LI LC + + LL + +++
Sbjct: 596 DK---AFQLVHLLYGKGYSVK---MEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLC 649
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
N ++ LC+ + +++A L ++V+ + LS L G+ EA S+ M
Sbjct: 650 NTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEEAESVQKRM 707
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 51/315 (16%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + ++L+I+P S+ Y +V L + A +L +L+E + S D +
Sbjct: 382 ALKVFERM-SELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLE--RKILLSGDGCKP 438
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFR-------------KTLDVG--------------- 200
L++ + G +++ K FR KTL +G
Sbjct: 439 LVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLV 498
Query: 201 ------FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
F P + L+NGLL ++ Q E+M R PN+ TF+ + + G
Sbjct: 499 LMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQG 558
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV---LPDLV 311
+ ++ + ++ +L + G + AF L ++Y + + +L+
Sbjct: 559 RASESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELI 618
Query: 312 TYTTLMNGLCKEGKVREAHQ--LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
Y LC KV + + LF H+ + D+ NT+IF C+ K+ E+ SL Y
Sbjct: 619 RY------LCHCRKVIQGSKLLLFSLESHQFVDMDLC--NTVIFQLCEINKLSEAFSLYY 670
Query: 370 EMMGNGIYPDTFTCQ 384
+++ G++ +CQ
Sbjct: 671 KLVEMGVHQQ-LSCQ 684
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 209/415 (50%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + ++ G QP++V+ N ++NG+ K + +M + + T++
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ C++G +D +++E +G LVTYN+L+ CK G+ ND L + M R
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
++P+++T+ L++ KEGK++EA++L+ M+ +G+SP+ ++YN+L+ YC + ++ E+
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
++L M+ N PD T +++GY K R+ + L ++ + G+ + Y L+
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
CQ + A L + + G +P + Y L++ LC + AL + +++ + +
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDI 450
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y +I C G+ +A +L + G+ P+ V+I+G C + +++A LL
Sbjct: 451 VMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 510
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +YN + DGDL+ +L + GF+ + + K +I L
Sbjct: 511 MEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 199/411 (48%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
++ K + +G++P + N L+NGL + + + + M G PN T+N + +
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK+GD L K++E D+ TY+T+I S C+ G ++ A L++ M + +
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
LVTY +L+ GLCK GK + QL M R + P+++++N LI + KEGK+QE+ L
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+ GI P+T T ++ GY + RL A N++ + R S + LI C+
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R L +I + G V + Y+ L++ C+ + A L EMV + P + TY
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ C G+ +A+ + +++ +S M D + ++I G C V A L
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
K + +Y + + + G LS+ L ++ G PN+ T +I +
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 210/406 (51%), Gaps = 9/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y IV+ + + S A+ +L ++ E ++ V + +I + +
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDE--RNVKADVFTYSTIID-------SLCR 217
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I + F++ G + S+V+ N L+ GL K + Q+ ++M I PN T
Sbjct: 218 DGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVIT 277
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN+L VF K G + + N +++ +G P+ +TYN+L+ YC + RL++A + +M
Sbjct: 278 FNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMV 337
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R N PD+VT+T+L+ G CK +V E +LF ++ RGL + V+Y+ L+ +C+ GK++
Sbjct: 338 RNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLE 397
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ L EM+ G+ PD T I++ G G+L AL + +LQ+ +++ +Y +I
Sbjct: 398 IAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIII 457
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+C+ + A +L + G P++ Y ++ LCK S+++A +L +M + +
Sbjct: 458 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNE 517
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P+ TY LI G + L++EM G D+ +++I+
Sbjct: 518 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 213/453 (47%), Gaps = 21/453 (4%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L +P ++ + +++ L +K S A+ ++ +VE C +V + +++
Sbjct: 129 LGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE--NGCQPNVVTYNSIVN-------G 179
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K G + RK + + + + + +++ L + CID +++EM GI +
Sbjct: 180 ICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 239
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L CK G + L+ + P+++T+N LI + K+G+L +A LY+
Sbjct: 240 LVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYK 299
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + P+ +TY +LM+G C + ++ EA+ + MV SPDIV++ +LI YCK
Sbjct: 300 EMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVK 359
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E L ++ G+ +T T I+VQG+ + G+L A L E+ GV Y
Sbjct: 360 RVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG 419
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC + + A + E + + + +Y ++E +CK V DA L + +
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCK 479
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+KP++ TY +I C G EA L+ +M E G P+ LI + + D+ +
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539
Query: 540 EALL------GFFAKKFQIYDTESYNAVFNMFA 566
L+ GF A D S V +M +
Sbjct: 540 AKLIEEMKSCGFSA------DASSIKMVIDMLS 566
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 35/435 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN--------- 253
PS+V + +G+ + ++M GI N +T NI+ + FC+
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 254 -GDVDK-------------VNG------------FLEKIEEEGFDPDLVTYNTLISSYCK 287
G V K +NG + ++ E G P++VTYN++++ CK
Sbjct: 123 LGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICK 182
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + A L R M RNV D+ TY+T+++ LC++G + A LF M +G+ +V+
Sbjct: 183 SGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVT 242
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+L+ CK GK + LL +M I P+ T +++ + KEG+L A L E+
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G+S + Y+ L+ C NR A ++L+ + ++ P + + L++ CK V
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+ + L ++ R + + TY L+ FC G+ A L EM+ G+LPD +L+
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C + KA + K D Y + + G + L G
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482
Query: 588 PNNLTCKYMIHSLWK 602
PN +T MI L K
Sbjct: 483 PNVMTYTVMISGLCK 497
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 184/379 (48%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P+ F+ + V F +K+E G ++ T N +
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C+ + A+ + + + PD T+ TL+NGLC E KV EA L RMV G
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++V+YN+++ CK G + LL +M + D FT I+ ++G + +A++
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E++ G+ S Y+ L+ LC+ + LL+ + +P++ +N L++
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + +A L EM+ + I P+ TY +L+ +C R EA +++D M+ + PD
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI GYC K V++ L +K+ + +T +Y+ + F + G L EL +
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ LG P+ +T ++ L
Sbjct: 407 VSLGVLPDVMTYGILLDGL 425
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 150/333 (45%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G V Y + S + +DA L++ M R LP LV ++ +G+ +
Sbjct: 25 GISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLV 84
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+M G++ +I + N +I +C+ K + S+L ++M G PDT T ++ G
Sbjct: 85 LDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 144
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
E ++ A+ LV + G + Y+ ++ +C+ A LL ++ +
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKAD 204
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ Y+ +++SLC+ + A+ L EM + IK SL TY +L+ C G+ + V L+
Sbjct: 205 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLK 264
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M ++P+ VLI+ + E + +A L K +T +YN++ + +
Sbjct: 265 DMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQN 324
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
LS+ + +R +P+ +T +I K
Sbjct: 325 RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCK 357
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 197/391 (50%), Gaps = 14/391 (3%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H + + +I+C C+ + + ++ K + G++P +V+ + L+NG + N
Sbjct: 102 HDLYTYNIVINCLCRCSRFVIALSVVG-------KMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + +M + + +N + FCK G V+ ++E +G D VTYN+
Sbjct: 155 VFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNS 214
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L++ C GR +DA L R M R+++P+++T+T L+N +EGK EA + + M+ R
Sbjct: 215 LVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ PD+ +YN++I C G++ E+K +L M+ G +PD T ++ G+ K R+
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
LV E+ + G+ + ++ +I Q RP AA + R+G P++ Y+ L+ L
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGL 391
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C V AL+L + M ++ ++TY +I C IG +A L + G+ PD
Sbjct: 392 CYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDV 451
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
+I+G+C ++ +KA+ F +K Q
Sbjct: 452 VTYTTMISGFCRKRLWDKAD----FLYRKMQ 478
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 157/368 (42%), Gaps = 41/368 (11%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ F+ L K+ + D V +E G DL TYN +I+ C+ R A +
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + PD+VT ++L+NG C+ +V A L +M D+V YNT+I +CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + L M +G+ DT T
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVT----------------------------------- 211
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ LC R A L+ + VP++ + L+ + + +A +EM+
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMI 271
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R I P + TY ++I C G+ EA ++D M+ G PD LING+C K V+
Sbjct: 272 RRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVD 331
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ L+ +++ + DT ++N + + + G E+ F R+G PN T ++
Sbjct: 332 EGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEI---FSRMGSRPNIRTYSILL 388
Query: 598 HSL---WK 602
+ L W+
Sbjct: 389 YGLCYNWR 396
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 148/313 (47%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L++A L+ M + LP +V ++ L++ + K LFH M G+ D+ +YN
Sbjct: 50 LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I C+ + + S++ +MM G PD T ++ G+ + R+ A++LV +++
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ IY+ +I C+ A L R+ +DG YN L+ LC +DA
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L +MV R+I P++ T+ ALI F G+ EA +EM+ + PD +I+G
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
CM V++A+ +L K D +YN + N F + + + +L + + G +
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349
Query: 591 LTCKYMIHSLWKG 603
+T +I ++
Sbjct: 350 VTFNTIIQGYFQA 362
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 61/110 (55%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G +P+I + + LL GL +++ ++E M + + + T+NI+ H C G+V+
Sbjct: 375 MGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVED 434
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+ +G +PD+VTY T+IS +C+K + A +LYR M +LP
Sbjct: 435 AWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 223/482 (46%), Gaps = 9/482 (1%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP + ++ L ++ A+ ML E+ S V D + T +V
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEM--------SSRGVAPDETTFTT-LMQGFV 227
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I + + + L++G + V+ N L+NG KL ++ ++ G P+
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C+N V ++ + +EG DPD+ TYN +++ CK G+L +A + M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R LPD+ T+ TL+ LC ++ EA L ++ +G+SPD+ ++N LI A CK G
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM +G PD T ++ G+L AL+L+ +++ G S Y+ +
Sbjct: 408 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTI 467
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A + +++ G + +N L++ LCK + DA L ++M+ +
Sbjct: 468 IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGL 527
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ TY +++ +C G +A +++ M +G D LING C A
Sbjct: 528 QPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALK 587
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K ++YN V ++ + L + +G P+ LT K + L
Sbjct: 588 VLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLC 647
Query: 602 KG 603
+G
Sbjct: 648 RG 649
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 227/489 (46%), Gaps = 11/489 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + + ++ A+++ ++E+ C + LI+ Y
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM--GCSATKVTVNVLIN-------GYC 262
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + ++ ++ + GF+P ++ N +NGL + + + +V + M + G P+
Sbjct: 263 KLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF 322
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+NI+ + CKNG +++ G L ++ + G PD+ T+NTLI++ C RL +A L R +
Sbjct: 323 TYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV 382
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ T+ L+N LCK G A +LF M + G +PD V+YNTLI C GK+
Sbjct: 383 TVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKL 442
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL +M G T T I+ G K+ R+ A + ++ G+S + ++ L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+D + A L+ ++ +G P+ YN ++ CK + A + + M
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ + TY LI C GR+ A+ ++ M GM P + ++ ++ A +
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L A+ + D +Y VF G + + + + GF P + + + L
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
Query: 601 WK-GMERKF 608
GM+ F
Sbjct: 683 LNLGMDDYF 691
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 212/496 (42%), Gaps = 13/496 (2%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR Q D +AL N + P Y I+ L A+ ++ LV ++
Sbjct: 48 LREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVG----ALDLMKVLVAEMRRE 103
Query: 160 PHSVD--VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
H V V + E V LI + G Q V N LLN L++
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL-----FGIQADTVVYNHLLNVLVE 158
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + VY EMG GI P+ TFN L C+ V LE++ G PD T
Sbjct: 159 GSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETT 218
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+ TL+ + ++G + A + M VT L+NG CK G+V +A + +
Sbjct: 219 FTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G PD ++YNT + C+ + + ++ M+ G PD FT I+V K G+L
Sbjct: 279 ADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 338
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A ++ ++ G ++ LI ALC NR A L ++ G P + +N L+
Sbjct: 339 EAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILI 398
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+LCK AL L +EM + P TY LI C +G+ G+A+ L+ +M ES
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM-ESTGC 457
Query: 518 PDSQIC-RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P S I +I+G C + + +AE + + + ++N + + +D +
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517
Query: 577 LQKRFLRLGFAPNNLT 592
L + + G PNN+T
Sbjct: 518 LINQMISEGLQPNNIT 533
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 44/317 (13%)
Query: 328 EAHQLFHRMVHR---------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
E QLF V G+ D V YN L+ + KM+ +S+ EM GI P
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179
Query: 379 DTFT--------CQ---------------------------IIVQGYGKEGRLLSALNLV 403
D T C+ ++QG+ +EG + +AL +
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVK 239
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ G S ++ + LI C+ R A +++ DG+ P YN + LC+
Sbjct: 240 ARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQN 299
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
D V AL + D MV P + TY ++ C C G+ EA ++++M++ G LPD
Sbjct: 300 DHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
LI C + +A L K D ++N + N + GD + L +
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419
Query: 584 LGFAPNNLTCKYMIHSL 600
G P+ +T +I +L
Sbjct: 420 SGCTPDEVTYNTLIDNL 436
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 10/267 (3%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+P Y +I G + K L+ EM G + Y + A++
Sbjct: 71 APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130
Query: 402 LVV-ELQR-FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L++ +LQ FG+ +Y++L+ L + ++ S+ +G G P + +N LM++
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC+ V A+L+ +EM R + P +T+ L+ F G A+ + MLE G
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250
Query: 520 SQICRVLINGYCMEKDVNKAEALLGF----FAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
VLINGYC + + E LG+ A F+ D +YN N ++ + +
Sbjct: 251 KVTVNVLINGYC---KLGRVEDALGYIQQEIADGFE-PDQITYNTFVNGLCQNDHVGHAL 306
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ ++ G P+ T +++ L K
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCK 333
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 173/336 (51%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + F + G +P IV N L+ GL I QV EM G P+ T+
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ + CK G++ + +G+ PD+ T+NTLI YCK+ +L+ A L M+
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD +TY +++NGLCK GKV E ++ F M+ +G P+ ++YN LI +C+ KM+E
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ +M G++PD + ++ G+ + G L A L +L+ G S + D ++ LI
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIG 578
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A A + + + G+ Y L++ CK +V A + EM+ + P
Sbjct: 579 AFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
S+ST+ +I R +AV ++ M++ G++P+
Sbjct: 639 SMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPE 674
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 187/387 (48%), Gaps = 1/387 (0%)
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GL Q++++M + PN FN + H CK GDV + L K+ + G
Sbjct: 160 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 219
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L TYN I C+ GRL +A L M R +PD+VTY TL+ GLCK+ +EA
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 278
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
RM+++G PD +YNT+I YCK +QE+ LL + + G PD T ++ G E
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + AL L E Q G+ +Y+ L+ LC A ++ + ++G P ++ Y
Sbjct: 339 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK +++DA ++ ++ + + P + T+ LI +C + A+ L++ M E
Sbjct: 399 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 458
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD+ ++NG C VN+ K + +YN + F + +
Sbjct: 459 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 518
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + + G P+ ++ +I+
Sbjct: 519 ASKVIVKMSQEGLHPDAVSFNTLIYGF 545
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 193/407 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + +E+ R+ ++ G P + N +++G K++ + + ++ ++ G P+
Sbjct: 267 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 326
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + C GDV++ + + +G PD+V YN+L+ C +G + A + M
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 386
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TY ++NGLCK G + +A + + + +G PD+ ++NTLI YCK K+
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 446
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ M GI PDT T ++ G K G++ E+ G + Y+ L
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ N+ A+ ++ ++ Q+G P +N L+ C+ + A LL ++ ++
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ T+ LI F G A + DEML G DS RVLI+G C +V++A
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 626
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
L KK I ++ V N + + + + + +++G P
Sbjct: 627 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 194/425 (45%), Gaps = 5/425 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + G +R++ F + P+ + N +++ L+ DQ +VY M G+ P
Sbjct: 59 AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 118
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT I FC L + G V Y T++ G +DA L+
Sbjct: 119 DLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLF 174
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +V P+L + +++ LCK G V EA L +++ RG+S ++ +YN I C+
Sbjct: 175 DQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA 234
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E+ L+ M + PD T +++G K+ A++ + + G Y
Sbjct: 235 GRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 293
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ + AT LL+ G+VP Y L+ LC V AL L +E
Sbjct: 294 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 353
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ IKP + Y +L+ C G A+ +M+EM E G PD Q ++ING C +++
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ K + D ++N + + + + L ++L +R G AP+ +T +++
Sbjct: 414 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473
Query: 599 SLWKG 603
L K
Sbjct: 474 GLCKA 478
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 182/370 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+ +++E+ + + + GF P V+ L+NGL +++ +++ E GI P
Sbjct: 299 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 358
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L C G + + ++ EEG PD+ TYN +I+ CK G ++DA +
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LPD+ T+ TL++G CK K+ A QL RM G++PD ++YN+++ CK
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ E EM+ G +P+ T I+++ + + ++ A ++V++ + G+ +
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C++ A L +++ + GY + + +N L+ + ++ A + DEM+
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + TYR LI C A + EM++ G +P +IN + V +
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 658
Query: 539 AEALLGFFAK 548
A ++ K
Sbjct: 659 AVGIIHIMVK 668
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 191/393 (48%), Gaps = 21/393 (5%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
+ D AL FN + IKP Y +V L A++++ E+ E + C
Sbjct: 337 AEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE--EGCHP 393
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + +I+ K+G I ++ + G+ P + + N L++G K +
Sbjct: 394 DIQTYNIVIN-------GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 446
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D Q+ E M GI P+T T+N + + CK G V++VN +++ +G P+ +TYN L
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I ++C+ ++ +A + M + + PD V++ TL+ G C+ G + A+ LF ++ +G
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
S ++NTLI A+ + M ++ + EM+ G D++T ++++ G K + A
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 626
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+VE+ + G S + +I +L ++R F A ++ + + G VP E+++++
Sbjct: 627 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP------EVVDTIL 680
Query: 462 KCDS---VADALLLKDEMVDRNIKPSLSTYRAL 491
D A +L++D M +I S TY L
Sbjct: 681 NADKKEIAAPKILVEDLMKKGHI--SYPTYEVL 711
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 228/487 (46%), Gaps = 14/487 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L H++ + LI+C C + + +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--GISHNLYTYSILINCF--CRRSQLSL 134
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L K + +G++P IV+ N LLNG N I + +M +G P++ TF
Sbjct: 135 AL-----AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H ++ + ++++ +G PDLVTY +++ CK+G ++ A L + M +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P +V Y T+++ LC V +A LF M ++G+ P++V+YN+LI C G+ +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--L 421
+ LL +M+ I P+ T ++ + KEG+L+ A L E+ + SI DI+ Y L
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSL 367
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C +R A + E + P++ YN L++ CK V + + L EM R +
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY LI F A + +M+ G+LPD +L++G C V A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL- 600
+ + + D +YN + + G + +L G PN +T M+
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 601 WKGMERK 607
KG++ +
Sbjct: 548 RKGLKEE 554
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 221/464 (47%), Gaps = 9/464 (1%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
N+ S A+ ++ ++VE+ P S F LI N A V L+ + +
Sbjct: 165 NRISDAVSLVGQMVEMGYQ-PDSF-TFNTLIHGLFRHNRASEAVALVD-------RMVVK 215
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K ID + ++M + I P +N + C +V+
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ +G P++VTYN+LI C GR +DA L M R + P++VT++ L++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G+ K R+ + L E+ + G+ + Y LI Q A + +
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ DG +P + Y+ L++ LC V AL++ + + ++P + TY +I C G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ + L + G+ P+ +++G+C + +A+AL ++ + D+ +YN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ DGD + EL + F + T + + L G
Sbjct: 576 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 45/451 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++V+ L A+ +L ++ E K P V ++ +I CN+ V
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVV-IYNTIIDAL--CNYKNVN 273
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
++ F + + G +P++V+ N L+ L ++ +M I PN T
Sbjct: 274 -----DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F+ L F K G + + +++ + DPD+ TY++LI+ +C RL++A +++ +M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++ P++VTY TL+ G CK +V E +LF M RGL + V+Y TLI + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + +M+ +G+ PD T I++ G G++ +AL + LQR
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR-------------- 494
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
S +E P + YN ++E +CK V D L + + +K
Sbjct: 495 -------------SKME--------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY ++ FC G EA +L EM E G LPDS LI + + D + L
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 594 IREMRSCRFVGDASTIGLVTNML-HDGRLDK 623
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 193/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF J+
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIXEA-KTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +J L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK G ++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNXMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L + K D +Y + + ++G L
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 181/343 (52%), Gaps = 3/343 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PNTHTFNILTHVFCKNGDVDKVNG 261
P V+ N L+NG K + + ++E M + G C PN T+++L +CK+G+V + G
Sbjct: 147 PDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLG 206
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
LE++E EG D+ Y++LIS++C +G + L+ M RR V P++VTY+ LM GL
Sbjct: 207 LLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLG 266
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+ G+ REA ++ M RG+ PD+V+Y L CK G+ ++ +L M+ G P T
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++V G KE R+ A +V + + G Y+ L+ LC + A L + +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Query: 442 GQDGYVPSLEIY--NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + +++ N L++ LCK V DA + MV+ ++ ++ TY LI +
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ EA+ L +ESG P+S V+ING C + ++ A L
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGL 489
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 228/500 (45%), Gaps = 19/500 (3%)
Query: 109 ALTFFNWVKNDLE-IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A++ F+ +K + + + P Y +V+ + + A ++L E ++ DC ++ +
Sbjct: 131 AMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEA-RVLFEAMKKGGDCRPNLVTYS 189
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI C Y K G + E + G + + + L++ I+ ++
Sbjct: 190 VLIDC-------YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGREL 242
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM R + PN T++ L + G + + L+ + G PD+V Y L CK
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR DA + +M ++ P +TY ++NGLCKE ++ +A + MV +G PD V+
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIVQGYGKEGRLLSALNLVVE 405
YNTL+ C GK+ E+ L ++ + PD FTC ++QG KEGR+ A +
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSS 422
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD- 464
+ G+ + Y++LI + A L + + G+ P+ Y+ ++ LCK
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQM 482
Query: 465 -SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
SVA L K M D I+P++ Y AL+ C +A SL EM D
Sbjct: 483 LSVARGLFCK--MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSF 540
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
++I+G DV A+ LL + D +++ + N F++ G L + M L ++ +
Sbjct: 541 NIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVS 600
Query: 584 LGFAPNNLTCKYMIHSLWKG 603
G P + + SL KG
Sbjct: 601 CGHVPGVV----VFDSLLKG 616
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 202/466 (43%), Gaps = 42/466 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLD--VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
A+ + + ++ F +T+D PS +C+ L++ L K D VY +M +
Sbjct: 14 AHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALV 73
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P + + LT F L + + GF ++ N ++ +C+ G+ + A
Sbjct: 74 LPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMS 133
Query: 297 LYRIMYRRN--VLPDLVTYTTLMNGLCKEGKVREAHQLF--------------------- 333
L+ M R V+PD VTY TL+NG CK ++ EA LF
Sbjct: 134 LFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLID 193
Query: 334 ---------------HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
M GL D+ Y++LI A+C EG ++ + L EM+ + P
Sbjct: 194 CYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSP 253
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++QG G+ GR A ++ ++ GV Y L LC++ R A +L
Sbjct: 254 NVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVL 313
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + Q G P YN ++ LCK D + DA + + MV + KP TY L+ CG
Sbjct: 314 DLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGA 373
Query: 499 GRSGEAVSLMDEMLESG--MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ EA+ L +L + PD C LI G C E V+ A + + +
Sbjct: 374 GKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIV 433
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN + + L + ++L K + GF+PN++T MI+ L K
Sbjct: 434 TYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCK 479
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 190/377 (50%), Gaps = 2/377 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G RE+ + + G +P +V+ L +GL K +V + M + G P T
Sbjct: 267 RTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N++ + CK +D G +E + ++G PD VTYNTL+ C G++++A L++++
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Query: 302 YRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+V PD+ T L+ GLCKEG+V +A ++ MV GL +IV+YN LI Y
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ E+ L + +G P++ T +++ G K L A L +++ G+ + Y+
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ +LC+++ A SL + + + + +N +++ K V A L EM
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++ P T+ LI F +G EA+ L ++M+ G +P + L+ GY ++ + K
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKI 626
Query: 540 EALLGFFAKKFQIYDTE 556
+LL A K + D++
Sbjct: 627 ISLLHQMADKDVVLDSK 643
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 199/432 (46%), Gaps = 13/432 (3%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ P Y ++ L ++ A +ML ++ + V D+++ T +
Sbjct: 250 KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT--------ARGVRPDVVAYTVLAD-GL 300
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G ++ K + G +P ++ N ++NGL K + +D + V E M + G P+
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGF--DPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+N L C G + + + + E F PD+ T N LI CK+GR++DA ++
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + ++VTY L+ G K+ EA +L+ V G SP+ ++Y+ +I CK
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ ++ L +M +GI P ++ +E L A +L E++ ++ +
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSF 540
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I + +A LL + VP ++ L+ K + +A+ L ++MV
Sbjct: 541 NIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVS 600
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC-MEKDVN 537
P + + +L+ + G + + +SL+ +M + ++ DS++ ++ C M ++++
Sbjct: 601 CGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLD 660
Query: 538 KAEALLGFFAKK 549
E +L F+++
Sbjct: 661 -VEKILPKFSQQ 671
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDC 176
D I+PT +Y ++ L + A + E+ ++ H+VDV F +I T
Sbjct: 495 DSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM----RNVNHNVDVVSFNIIIDGT--- 547
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+K G ++ + + + + P V+ + L+N KL +D+ +YE+M G
Sbjct: 548 ----LKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGH 603
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
P F+ L + G+ +K+ L ++ ++ D +T+++ C R
Sbjct: 604 VPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 177/351 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + + F LD G +P++++ + L++G K + + V++ M I P
Sbjct: 497 GHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVP 556
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI + CK G + L+K E+GF P +TYN+++ + K+G ++ A Y
Sbjct: 557 SDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY 616
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M V P+++TYTTL+NG CK A ++ + M ++GL DI +Y LI +CK+
Sbjct: 617 REMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKK 676
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ + L E++ G+ P++ ++ GY + +ALNL + G+S Y
Sbjct: 677 QDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTY 736
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI L ++ R A L + G +P + IY L+ LC + +A + EM
Sbjct: 737 TTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMER 796
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+I P++ Y ALI G EA L +EML+ G+ P+ +LING
Sbjct: 797 DSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILING 847
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 229/503 (45%), Gaps = 12/503 (2%)
Query: 102 CQSDS-VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+ D VSAL FF+ + N+ P Y +++ N + A + ++ CP
Sbjct: 360 CKQDKLVSALEFFDKM-NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKN-KNICP 417
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + LI ++KV E+ K F + + +I + N LL+ L K
Sbjct: 418 -TVFIVNSLIR-------GFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGK 468
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + ++++M G+ P ++N + C+ G++D + + G P+++TY+
Sbjct: 469 MSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSI 528
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ Y K G AFY++ M N++P TY +NGLCK G+ EA + + V +G
Sbjct: 529 LMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKG 588
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
P ++YN+++ + KEG + + + EM +G+ P+ T ++ G+ K AL
Sbjct: 589 FVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLAL 648
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+ E++ G+ + Y LI C+ A+ L + G P+ IYN L+
Sbjct: 649 KMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGY 708
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+++ AL L+ M+ I L TY LI GR A+ L EM G++PD
Sbjct: 709 RNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDI 768
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
I VLING C + + A+ +L + + YNA+ + G+L + L
Sbjct: 769 IIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNE 828
Query: 581 FLRLGFAPNNLTCKYMIHSLWKG 603
L G PN+ T +I+ KG
Sbjct: 829 MLDKGLTPNDTTYDILINGKIKG 851
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 139/566 (24%), Positives = 252/566 (44%), Gaps = 60/566 (10%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK-FSFAMKM 148
L + LL + D SALT+F ++ + + C+++HIL +++ A +
Sbjct: 82 LARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLKQAQNL 141
Query: 149 LCELVE---------LVKDCPHSVDVFQDLISCTEDCNW---AYVKVGLIRESFKTFRKT 196
L + LV S F D S N+ +Y+K + ++ F +
Sbjct: 142 LNRFISGDSGPMPNILVDHFIGSTKRF-DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRL 200
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM---GRIGICPNTH------------ 241
++ P I NFLL L+K + I + +VYE+M G G C H
Sbjct: 201 VESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNE 260
Query: 242 --------------------TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++I+ FCKN DV+ G L+ + ++G+ P T+ ++
Sbjct: 261 EEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSV 320
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I + K+G + +A L M V ++V TTL+ G CK+ K+ A + F +M G
Sbjct: 321 IGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGP 380
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
SP+ V+Y LI CK G M ++ L +M I P F +++G+ K A
Sbjct: 381 SPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASK 440
Query: 402 LVVELQRFGVSISRDI-----YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L F +++ DI Y+ L+ LC++ + AT+L +++ G P+ YN +
Sbjct: 441 L------FDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ C+ ++ A + +M+D +KP++ TY L+ + G + A + D M++ +
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENI 554
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+P + ING C ++A+ +L F +K + +YN++ + F ++G +S +
Sbjct: 555 VPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALT 614
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G +PN +T +I+ K
Sbjct: 615 AYREMCESGVSPNVITYTTLINGFCK 640
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 211/436 (48%), Gaps = 12/436 (2%)
Query: 176 CNWAYVKVGLIRESFKTFRKTL----DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
CN +G RE FK L ++ QP++V+ L+N L K +D+ +V+E+M
Sbjct: 308 CNALLTALGRARE-FKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366
Query: 232 GR-----IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF-DPDLVTYNTLISSY 285
+ P+ T+N L CK G ++ G +E++ + P+ VTYN LI Y
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK + A L+ M + V P++VT TL++G+CK G++ A + F+ M +GL +
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+Y LI A+C ++++ L EM+ G PD ++ G + G+L A ++ +
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
++ G S ++ LI C+ N+ A +L+ + G P YN L+ K
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML-PDSQICR 524
+ A L +MV + P++ TY ALI +C G EA+ + +M + + P++ I
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+LIN C + V+ A +L+ K +T ++NA+F E LSK EL R
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 585 GFAPNNLTCKYMIHSL 600
P+ +T + + L
Sbjct: 727 ACNPDYITMEILTEWL 742
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 1/331 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K +I + + F + G P++V+ N L++G+ K I+ + + EM G+
Sbjct: 425 GYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKG 484
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L FC +++K +++ E G PD + Y TLIS + G+L+ A ++
Sbjct: 485 NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVL 544
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M PD+V++ L+NG C++ K+ EA+++ M + G+ PD V+YNTLI + K
Sbjct: 545 SKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG-VSISRDI 417
G + L+ +M+ G+ P T ++ Y G L A+ + ++ V + I
Sbjct: 605 GDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVI 664
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI +LC+ N+ A SL++ + G P+ +N + + L + + ++ A L D M
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMT 724
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ P T L +G + + S +
Sbjct: 725 EHACNPDYITMEILTEWLSAVGETAKLKSFV 755
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 137/561 (24%), Positives = 241/561 (42%), Gaps = 72/561 (12%)
Query: 94 EISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
+I+R+L + AL FFNWV+ + P + L + A S +L+
Sbjct: 92 QITRLL----GSTAKALKFFNWVQAN---SPCQDSPLLSFTLEAVFEHASREPNSHNKLL 144
Query: 154 ELVKDC-----PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
+L K P SV+ LI C + + ++ ESF + + I
Sbjct: 145 DLFKTSKSHKIPLSVNAATLLIRC-------FGRAQMVDESFLVYNELCPSRRLTHIR-- 195
Query: 209 NFLLNGLLKLNCIDQCWQVYEEM--GRIGICPNTHTFNILTHVFCKNG------DVDKVN 260
N L++ L + +D + +EM + PN++T +I+ K D +++
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIM------------------ 301
G + K E P+ + LIS C+ GR + A+ L+ +M
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315
Query: 302 -----YRR-----------NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS--- 342
++R ++ P++VT+ L+N LCK +V EA ++F +M + G S
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGF 374
Query: 343 ---PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKEGRLLS 398
PD+++YNTLI CK G+ +E L+ M P+T T ++ GY K + +
Sbjct: 375 LVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEA 434
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L ++ + GV + + L+ +C+ R A + G + Y L+
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIR 494
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ C +++ A+ L DEM++ P Y LI G+ A ++ +M E+G P
Sbjct: 495 AFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSP 554
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D VLING+C + +++A +L D +YN + + F++ GD S L
Sbjct: 555 DIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLM 614
Query: 579 KRFLRLGFAPNNLTCKYMIHS 599
K+ ++ G P +T +IH+
Sbjct: 615 KKMVKEGLVPTVVTYGALIHA 635
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 146/302 (48%), Gaps = 18/302 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FFN ++ +K + Y ++ N AM++ E++E C V+
Sbjct: 470 AVEFFNEMQGK-GLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE--AGCSPDAIVYYT 526
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LIS L R SF K + GF P IVS N L+NG + N +D+ +++
Sbjct: 527 LISGLSQAG------KLDRASF-VLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEML 579
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+EM GI P+ T+N L F K GD + ++K+ +EG P +VTY LI +YC
Sbjct: 580 KEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLN 639
Query: 289 GRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G L++A ++R M + V P+ V Y L+N LC++ +V A L M +G+ P+ +
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N + ++ + ++ L+ M + PD T +I+ + LSA+ +L+
Sbjct: 700 FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTE-------WLSAVGETAKLK 752
Query: 408 RF 409
F
Sbjct: 753 SF 754
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 166/414 (40%), Gaps = 57/414 (13%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN---THTFNILTHVFCKNGDVDKVN 260
S+ + L+ + +D+ + VY E+ CP+ TH NIL V + G VD
Sbjct: 158 SVNAATLLIRCFGRAQMVDESFLVYNEL-----CPSRRLTHIRNILIDVLFRKGRVDDAL 212
Query: 261 GFLEKI--EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM------YRRNVLPDLVT 312
L+++ + F P+ T + + S+ K+ ++ A I+ V P+ +
Sbjct: 213 HLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIW 272
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
T L++ LC+ G+ A + H ++ G + S N L+ A + + + +LL EM
Sbjct: 273 LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK 332
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I P+ T FG+ LI LC+ R
Sbjct: 333 EMDIQPNVVT--------------------------FGI---------LINHLCKFRRVD 357
Query: 433 AATSLLERIG---QDGYV--PSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLS 486
A + E++ +G++ P + YN L++ LCK + L L + M + P+
Sbjct: 358 EALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTV 417
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LI +C A L D+M + G+ P+ L++G C +N A
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K + +Y A+ F ++ K MEL L G +P+ + +I L
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 114/271 (42%), Gaps = 20/271 (7%)
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIVQGYGKEGRLLSALN----- 401
N LI ++G++ ++ LL EM+ P++ T I+ K ++ A++
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 402 -LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
LV + V + LI LC+ R A +L + + G V N L+ +L
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM---LESGML 517
+ L EM + +I+P++ T+ LI C R EA+ + ++M +G L
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375
Query: 518 --PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ----IYDTESYNAVFNMFAEDGDL 571
PD LI+G C V + E LG + + +T +YN + + + + +
Sbjct: 376 VEPDVITYNTLIDGLC---KVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMI 432
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL + + G PN +T ++ + K
Sbjct: 433 EAARELFDQMNKDGVPPNVVTLNTLVDGMCK 463
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 190/379 (50%), Gaps = 12/379 (3%)
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL-----IRESFKTFRKTLDVG 200
+ M+ E EL+KD VF+ + + + + GL + + + F + G
Sbjct: 304 ISMVQEATELLKDA-----VFKGFVP--DQVTYCSLINGLCAEGDVERALELFNEAQAKG 356
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P IV N L+ GL I QV EM G P+ T+NI+ + CK G++
Sbjct: 357 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 416
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ +G+ PD+ T+NTLI YCK+ +L+ A L M+ + PD +TY +++NGL
Sbjct: 417 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 476
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK GKV E ++ F M+ +G P+ ++YN LI +C+ KM+E+ ++ +M G++PD
Sbjct: 477 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 536
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
+ ++ G+ + G L A L +L+ G S + D ++ LI A A + +
Sbjct: 537 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 596
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G+ Y L++ CK +V A + EM+ + PS+ST+ +I R
Sbjct: 597 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 656
Query: 501 SGEAVSLMDEMLESGMLPD 519
+AV ++ M++ G++P+
Sbjct: 657 VFQAVGIIHIMVKIGVVPE 675
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 187/387 (48%), Gaps = 1/387 (0%)
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GL Q++++M + PN FN + H CK GDV + L K+ + G
Sbjct: 161 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 220
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L TYN I C+ GRL +A L M R +PD+VTY TL+ GLCK+ +EA
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 279
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
RM+++G PD +YNT+I YCK +QE+ LL + + G PD T ++ G E
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + AL L E Q G+ +Y+ L+ LC A ++ + ++G P ++ Y
Sbjct: 340 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 399
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK +++DA ++ ++ + + P + T+ LI +C + A+ L++ M E
Sbjct: 400 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 459
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD+ ++NG C VN+ K + +YN + F + +
Sbjct: 460 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 519
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + + G P+ ++ +I+
Sbjct: 520 ASKVIVKMSQEGLHPDAVSFNTLIYGF 546
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 193/407 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + +E+ R+ ++ G P + N +++G K++ + + ++ ++ G P+
Sbjct: 268 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 327
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + C GDV++ + + +G PD+V YN+L+ C +G + A + M
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 387
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TY ++NGLCK G + +A + + + +G PD+ ++NTLI YCK K+
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 447
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ M GI PDT T ++ G K G++ E+ G + Y+ L
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ N+ A+ ++ ++ Q+G P +N L+ C+ + A LL ++ ++
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ T+ LI F G A + DEML G DS RVLI+G C +V++A
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 627
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
L KK I ++ V N + + + + + +++G P
Sbjct: 628 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 194/425 (45%), Gaps = 5/425 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + G +R++ F + P+ + N +++ L+ DQ +VY M G+ P
Sbjct: 60 AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 119
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT I FC L + G V Y T++ G +DA L+
Sbjct: 120 DLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLF 175
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +V P+L + +++ LCK G V EA L +++ RG+S ++ +YN I C+
Sbjct: 176 DQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA 235
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E+ L+ M + PD T +++G K+ A++ + + G Y
Sbjct: 236 GRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 294
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ + AT LL+ G+VP Y L+ LC V AL L +E
Sbjct: 295 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 354
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ IKP + Y +L+ C G A+ +M+EM E G PD Q ++ING C +++
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ K + D ++N + + + + L ++L +R G AP+ +T +++
Sbjct: 415 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474
Query: 599 SLWKG 603
L K
Sbjct: 475 GLCKA 479
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 182/370 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+ +++E+ + + + GF P V+ L+NGL +++ +++ E GI P
Sbjct: 300 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 359
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L C G + + ++ EEG PD+ TYN +I+ CK G ++DA +
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LPD+ T+ TL++G CK K+ A QL RM G++PD ++YN+++ CK
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ E EM+ G +P+ T I+++ + + ++ A ++V++ + G+ +
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C++ A L +++ + GY + + +N L+ + ++ A + DEM+
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + TYR LI C A + EM++ G +P +IN + V +
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 659
Query: 539 AEALLGFFAK 548
A ++ K
Sbjct: 660 AVGIIHIMVK 669
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 191/393 (48%), Gaps = 21/393 (5%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
+ D AL FN + IKP Y +V L A++++ E+ E + C
Sbjct: 338 AEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE--EGCHP 394
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + +I+ K+G I ++ + G+ P + + N L++G K +
Sbjct: 395 DIQTYNIVIN-------GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 447
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D Q+ E M GI P+T T+N + + CK G V++VN +++ +G P+ +TYN L
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I ++C+ ++ +A + M + + PD V++ TL+ G C+ G + A+ LF ++ +G
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
S ++NTLI A+ + M ++ + EM+ G D++T ++++ G K + A
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 627
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+VE+ + G S + +I +L ++R F A ++ + + G VP E+++++
Sbjct: 628 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP------EVVDTIL 681
Query: 462 KCDS---VADALLLKDEMVDRNIKPSLSTYRAL 491
D A +L++D M +I S TY L
Sbjct: 682 NADKKEIAAPKILVEDLMKKGHI--SYPTYEVL 712
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 216/489 (44%), Gaps = 52/489 (10%)
Query: 44 LSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLL-PHLGAHEISRVLLRC 102
LS+P + F N ++D+ + K+ LL+N+L + P + +
Sbjct: 108 LSSPRFGFQHSVHTGNALLDVFART-KRHREAGNLLKNELATIFRPDVETWNVLITGYCL 166
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ A ++ D + P+ + L++H L + K AM
Sbjct: 167 AREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM---------------- 210
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+ F+ R+++ V S + + L+NGL+K +
Sbjct: 211 -------------------------DHFEAVRRSMPV----SAATFSILINGLVKAGMMI 241
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
Q + +E G + HT+ + + KN + + +EKI G P + TYN L+
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ CK GRL +A L R + PD+VTYT+L++GL KE + EA++LF M RGL+
Sbjct: 302 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLA 361
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
D V Y LI + GK+ ++ S+ M +G PD T ++ G K GR+ +A+ +
Sbjct: 362 LDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 421
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
++ G++ + +Y LI LC+ + A +L ++ + P YN L++ LCK
Sbjct: 422 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 481
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
V A DEM++ KP + TY LI C G + A ++D+M S + S
Sbjct: 482 SGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSS-- 539
Query: 523 CRVLINGYC 531
L++G C
Sbjct: 540 ---LVDGLC 545
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 193/431 (44%), Gaps = 42/431 (9%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y IV+ LA N K A+ ++ ++ C ++ + L++ K+G +
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKIT--ANGCTPTIATYNALLN-------GLCKMGRLE 311
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ RK +D G P +V+ L++GL K + +++++EM G+ +T + L
Sbjct: 312 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALI 371
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ G + + + + + G PD+VT +T+I K GR+ A +++ M R +
Sbjct: 372 RGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 431
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+ V Y+ L++GLCK K+ A ++ +M +PD ++YN LI CK G ++ +++
Sbjct: 432 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 491
Query: 368 LYEMMGNGIYPDTFTCQII------------------------------VQGYGKEGRLL 397
EM+ G PD +T I+ V G K G+L
Sbjct: 492 FDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLE 551
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
L E++R GV+ S+ LI LC+ NR A SL I ++G +P YN ++
Sbjct: 552 GGCMLFHEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSII 609
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+L K V + + EM R KP TY AL+ G R A EM G +
Sbjct: 610 SALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYV 668
Query: 518 PDSQICRVLIN 528
P I L +
Sbjct: 669 PPVSILHKLAD 679
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/443 (24%), Positives = 191/443 (43%), Gaps = 10/443 (2%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S D + C +D + A+ E F+ + GFQ S+ + N LL+ +
Sbjct: 84 STDAVVKIFQCLKDADLAW-------ELFQCL-SSPRFGFQHSVHTGNALLDVFARTKRH 135
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDLVTYNT 280
+ + + P+ T+N+L +C + ++ + ++EE+ G P L T+N
Sbjct: 136 REAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNL 195
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ CK G++ A + + RR++ T++ L+NGL K G + +AH L G
Sbjct: 196 VLHGLCKSGKVLAAMDHFEAV-RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNG 254
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ DI +Y ++ K K+QE+ +L+ ++ NG P T ++ G K GRL A+
Sbjct: 255 CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 314
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L+ ++ G + Y LI L ++ R F A L + + G Y L+ L
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ + A + M P + T +I GR G AV + M G+ P+
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 434
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ LI+G C + ++ A +L K F DT +YN + + + GD+
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494
Query: 581 FLRLGFAPNNLTCKYMIHSLWKG 603
L G P+ T +I L K
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKA 517
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 226/504 (44%), Gaps = 88/504 (17%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELV----------------ELVKDCPHSVDVFQD 168
T + I+H+L +N FS + +L +L+ EL + PH +D F
Sbjct: 37 THQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQ--PH-LDSFPT 93
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+ E A+V+ L ++ F + + G P + N LL L+K N ++ W+V+
Sbjct: 94 HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153
Query: 229 EE----------------------------------MGRIGICPNTHTFNILTHVFCKNG 254
E M +G+ PN + L CKNG
Sbjct: 154 NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213
Query: 255 DVDK-----------------------VNGFL------------EKIEEEGFDPDLVTYN 279
D+++ +NGF EK++ G P++ TYN
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
++I C G+LN+AF L+ M R V ++VTY TL+ GLC+E +V EA +L RM
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GLSP+++SYNTLI YC G + ++ SL +M +G P T I++ G+ +
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
++V E++ G+S S+ Y L+ AL + + A + + + G V + IY L+
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 453
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC + +A L + + ++KP+ Y +I +C G S A+ L+ EM E+GM+P+
Sbjct: 454 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513
Query: 520 SQICRVLINGYCMEKDVNKAEALL 543
I C ++ +AE LL
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLL 537
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 166/345 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I + F K ++ + + L+NG K+ ++YE+M GI PN +
Sbjct: 211 KNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVY 270
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C +G ++ +++ E G ++VTYNTLI C++ R+ +A L M
Sbjct: 271 TYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM 330
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P+L++Y TL++G C G + +A LF++M G SP + +YN LI + +
Sbjct: 331 KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNS 390
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ EM G+ P T I++ + + A + +++ G+ IY L
Sbjct: 391 AGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL 450
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC A+ L + + + P+ IYN ++ CK S AL L EM + +
Sbjct: 451 IHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 510
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P++++Y + I C + EA L+ +M+E G+ P I ++
Sbjct: 511 VPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 152/313 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+GL ++ + + K G P++ + N ++ ++ +++++EM G+
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 302
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L C+ V + + +++ +G P+L++YNTLI YC G L+ A L+
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 362
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P L TY L+ G + + M RGLSP V+Y L+ A +
Sbjct: 363 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 422
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++++ + M G+ D + +++ G G + A L L + + IY
Sbjct: 423 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 482
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C++ + A LL+ +G++G VP++ YN ++ LCK + +A +L +M++
Sbjct: 483 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIE 542
Query: 479 RNIKPSLSTYRAL 491
+KPS+S + +
Sbjct: 543 LGLKPSISIWNMI 555
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 2/283 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +F+ F + + G ++V+ N L+ GL + + + ++ M R G+ PN ++
Sbjct: 283 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 342
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +C G++DK + +++ G P L TYN LI+ + + + R M
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P VTYT LM+ L + + +A Q++ M GL DI Y LI C G M+E
Sbjct: 403 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 462
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L + + P+ ++ GY KEG AL L+ E+ G+ + Y+ I
Sbjct: 463 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQ 522
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
LC+D + A LL+ + + G PS+ I+N M S + D+V
Sbjct: 523 ILCKDEKWTEAEVLLKDMIELGLKPSISIWN--MISKARFDNV 563
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 188/358 (52%), Gaps = 5/358 (1%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICPNTHTFNILT 247
+ +TF + D Q S+ S N LLN ++ D +++ + G+ PN T NIL
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK DV+ L+++ G P++VTY T++ Y +G + +A ++ ++ R L
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL 268
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD TYT LMNG C++G++ +A +L M G+ P+ V+Y ++ AYCKE K E+++L
Sbjct: 269 PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNL 328
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M+ P + C ++ + G++ A L + + I LI LC+
Sbjct: 329 LDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCK 388
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ + + A L + G +PSL YN L+ +C+ +++A L D+M+++ KP+ T
Sbjct: 389 EGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFT 447
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC---MEKDVNKAEAL 542
Y LI F IG + E + +++EML++ +P+ +LI C ME +V+K ++
Sbjct: 448 YNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM 505
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 166/343 (48%), Gaps = 3/343 (0%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMNGLCKE 323
+I++ + + NTL++++ + R + +++ + VLP++ T L+ LCK+
Sbjct: 155 RIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKK 214
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
V A ++ M G+ P++V+Y T++ Y G M + + E+ G PD T
Sbjct: 215 NDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTY 274
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I++ GY ++GRL A+ L+ ++ GV + Y ++ A C++ + A +LL+ + +
Sbjct: 275 TILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLE 334
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
YVPS + ++++ LC+ + +A L M+ +N P + LI C G+ E
Sbjct: 335 RQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWE 394
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L E E G +P LI G C + ++++A L +K + +YN +
Sbjct: 395 ARKLFGE-FERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIK 453
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK-GME 605
F++ G+ + + + + L PN T +I L K GME
Sbjct: 454 GFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGME 496
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 4/385 (1%)
Query: 221 IDQCWQVYEEMGRI--GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+D Q++E G+ N T++ + H + V L + + +
Sbjct: 74 LDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIF 133
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+I +Y G+ + A + + NV + + TL+N + + H +F
Sbjct: 134 INVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRS 193
Query: 339 R-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ G+ P++ + N LI A CK+ ++ + +L EM G+ P+ T I+ GY G ++
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMV 253
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+A + EL G Y L+ C+ R A L++ +G++G P+ Y ++
Sbjct: 254 NANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMV 313
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
E+ CK +A L D+M++R PS + +I C G+ EA L ML+ +
Sbjct: 314 EAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCM 373
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD+ I LI+ C E V +A L G F ++ I +YN + E G+LS+ +L
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKL 432
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G+ PN T +I K
Sbjct: 433 WDDMMEKGYKPNAFTYNMLIKGFSK 457
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ K+C V ++ +C A K + + K + +G P++V+ +L G
Sbjct: 187 MFKNCRSKYGVLPNVFTCNILIK-ALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGG 245
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+ +V+ E+ G P+ T+ IL + +C+ G + ++ + E G +P+
Sbjct: 246 YSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPN 305
Query: 275 LVTYNTLISSYCKK-----------------------------------GRLNDAFYLYR 299
VTY ++ +YCK+ G++ +A L++
Sbjct: 306 EVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWK 365
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M ++N +PD +TL++ LCKEGKV EA +LF RG P +++YNTLI C++G
Sbjct: 366 RMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKG 424
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E+ L +MM G P+ FT ++++G+ K G + ++ E+ ++ Y
Sbjct: 425 ELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYA 484
Query: 420 YLIVALCQ 427
LI LC+
Sbjct: 485 ILIEELCK 492
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K E+ L+ + PS C +++ L + I++ ++++ M + P
Sbjct: 315 AYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMP 374
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + L H CK G V + + E G P L+TYNTLI+ C+KG L++A L+
Sbjct: 375 DNAIMSTLIHWLCKEGKVWEARKLFGEFER-GAIPSLLTYNTLIAGMCEKGELSEAGKLW 433
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ TY L+ G K G +E ++ M+ P+ +Y LI CK
Sbjct: 434 DDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKM 493
Query: 359 GKMQESKSLLYEMMGNG 375
G E ++ M +G
Sbjct: 494 GMEGEVDKVVSMAMASG 510
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 205/419 (48%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ + K G P+ V N L++G + + + + EM G+ P T+
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + GD++K+ L ++ E P++ YN++I + CK + A + + M+
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD +T++TL++GLC+EG+V+EA +L L+P++ SY +LI +C G++
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +LL EMM G PD T ++ G G++ AL + ++ + +IY+ LI
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLIS 512
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ AA +L+E + + P +Y L++ + +S+ +A + + M + I P
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y A+I +C G EAV M M + G +PD LI GY + +++ A +LL
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K+ + +Y+++ N + + GD L G PN +T +I SL+K
Sbjct: 633 CDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFK 691
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 182/381 (47%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D ++Y+EM + ++ ++ C G V+K +E G P+ V YN L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I YC++G + L M + +LP +VTY TLM+ L ++G + + L M R L
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++ YN++I A CK ++ +L +M G PD T ++ G +EGR+ A
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ E R+ ++ + Y LI C A++LL + + G+ P + + L+ L
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
V++ALL++++M R + P + Y LI C A +L++EMLE + PD
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ LI+G+ + +++A + F +K D YNA+ + + G +++ +E
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
++G P+ T +I K
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAK 621
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 187/392 (47%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
++ GL +++ ++ E G PN +N+L +C+ GDV + L ++E +G
Sbjct: 265 MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKG 324
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P +VTY TL+S +KG L L M R + P++ Y ++++ LCK +A
Sbjct: 325 LLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQAL 384
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ +M G PD ++++TLI C+EG++QE++ LL E + P+ + ++ G+
Sbjct: 385 VVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGF 444
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
G ++ A NL+VE+ G + + LI L + A + E++ +P
Sbjct: 445 CVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDA 504
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
IYN L+ LCK + A L +EM+++N+ P Y LI F EA + +
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M + G+ PD +I GYC +N+A + K +I D +Y + +A+ G+
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+S + L ++ PN + +I+ K
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCK 656
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 6/406 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++V+ L++ L + +++ + EM + PN +N + CK +
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ G DPD +T++TLIS C++GR+ +A L R R + P+L +YT+L++G
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C G+V A L M+ RG +PD+V++ LI G++ E+ + +M + PD
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+++ G K+ L +A NL+ E+ V + +Y LI ++ A + E
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE 563
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q G P + YN +++ C+ + +A+ M P TY LI + G
Sbjct: 564 FMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQG 623
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
A+SL+ +M++ P+ LINGYC D + AE L G + + +Y
Sbjct: 624 NISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYT 683
Query: 560 AVF-NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ ++F +D + M + L +PN+ Y +HSL G+
Sbjct: 684 ILIGSLFKKDKVVRAAMYFEYMLLN-QCSPND----YTLHSLVTGL 724
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 210/494 (42%), Gaps = 47/494 (9%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
CQ V E+ P S+Y ++H + A +L E++E H
Sbjct: 410 CQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMER----GH 465
Query: 162 SVDV--FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
+ DV F LI V G + E+ K P N L++GL K
Sbjct: 466 TPDVVTFGALIH-------GLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKK 518
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ + EEM + P+ + + L F +N +D+ E +E++G PD+V YN
Sbjct: 519 MLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+I YC+ G +N+A M + +PD TYTTL+ G K+G + A L M+ R
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR 638
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
P++V+Y++LI YCK G ++ L M G++P+ T I++ K+ +++ A
Sbjct: 639 RCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRA 698
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI------- 452
+ S + L+ LC ++ + G L+I
Sbjct: 699 AMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVND 758
Query: 453 --------YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
YN ++ SLC + + +AL LK++M ++ KP +T+ +L+ FC +G+S E
Sbjct: 759 RCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREW 818
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+++ + L + ++L + Y ++ E Y+ VF +
Sbjct: 819 RTILPNEFQRDELEVASRYKILFDQYVVKS------------------VGCEVYS-VFQL 859
Query: 565 FAEDGDLSKLMELQ 578
+ E+ SK MEL+
Sbjct: 860 YLEECRSSKQMELK 873
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 162/391 (41%), Gaps = 5/391 (1%)
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDL 275
+ + +D + G P L + G K ++ E G P
Sbjct: 165 RFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAREHHGTLPGA 224
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
N L+ ++ R +DA LY M D + ++ GLC EG V + +L
Sbjct: 225 THTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEA 284
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
G P+ V YN LI YC+ G + LL EM G+ P T ++ G++G
Sbjct: 285 RWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGD 344
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L +L+ E++ + + IY+ +I ALC+ A +L+++ G P ++
Sbjct: 345 LEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFST 404
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ LC+ V +A L E + P+LS+Y +LI FC G A +L+ EM+E G
Sbjct: 405 LISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERG 464
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
PD LI+G + V++A + A + + D YN + + + L
Sbjct: 465 HTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAAR 524
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
L + L P+ KY+ +L G R
Sbjct: 525 NLIEEMLEQNVHPD----KYVYTTLIDGFIR 551
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 152/363 (41%), Gaps = 4/363 (1%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFD---PDLVTYNTLISSYCKKGRLNDAFYL-YR 299
+ L + + G D V+ L + G P L+++Y G A + R
Sbjct: 154 SALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQR 213
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
LP L+ L + + +A +L+ M+ D S ++ C EG
Sbjct: 214 AREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEG 273
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++ L+ G G P+ +++ GY + G + + L+ E++ G+ + Y
Sbjct: 274 LVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYG 333
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L + SLL + + P+++IYN ++++LCKC S + AL++ +M
Sbjct: 334 TLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAG 393
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P T+ LI C GR EA L+ E + P+ LI+G+C+ +V A
Sbjct: 394 GCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVA 453
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL ++ D ++ A+ + G +S+ + ++++ P+ +I
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISG 513
Query: 600 LWK 602
L K
Sbjct: 514 LCK 516
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/433 (29%), Positives = 205/433 (47%), Gaps = 12/433 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P SS+Y L+V + K A + L +++ D +CT A
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR--------GFIPDNATCTLILT-ALC 864
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ GL+ + FRK +D+GF+P++++ L++GL K I Q +++ EEM R G PN +
Sbjct: 865 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 924
Query: 242 TFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T L CK G +K FL+ + + + P++ TY ++I YCK+ +LN A L+
Sbjct: 925 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 984
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P++ TYTTL+NG CK G A++L + M G P+I +YN I + CK+ +
Sbjct: 985 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 1044
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E+ LL + G+ D T I++Q K+ + AL + + G + +
Sbjct: 1045 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 1104
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI A C+ + + L + + G +P+ E Y ++ CK + AL M
Sbjct: 1105 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 1164
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV-LINGYCMEKDVNKA 539
P TY +LI C EA L + M++ G+ P ++ RV L YC D A
Sbjct: 1165 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP-PEVTRVTLAYEYCKRNDSANA 1223
Query: 540 EALLGFFAKKFQI 552
LL KK I
Sbjct: 1224 MILLEPLDKKLWI 1236
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 212/424 (50%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ ++G + E+ + G PS ++ N +L ++L I+ V++EM G+ P+
Sbjct: 758 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 817
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ ++ ++ ++G + + + +L + + GF PD T ++++ C+ G +N A + +R
Sbjct: 818 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 877
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M P+L+ +T+L++GLCK+G +++A ++ MV G P++ ++ LI CK G
Sbjct: 878 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 937
Query: 360 KMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ L +++ + Y P+ T ++ GY KE +L A L ++ G+ + + Y
Sbjct: 938 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 997
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L+ +G +G++P++ YN ++SLCK +A L ++
Sbjct: 998 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 1057
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ TY LI C +A++ M ++G D ++ +LI +C +K + +
Sbjct: 1058 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 1117
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+E L I E+Y ++ + + ++GD+ ++ R G P++ T +I
Sbjct: 1118 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 1177
Query: 599 SLWK 602
L K
Sbjct: 1178 GLCK 1181
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F + GF+ + N L+ + + + ++++ + +G+ P T+
Sbjct: 1080 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 1139
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ +CK GD+D + ++ G PD TY +LIS CKK +++A LY M R
Sbjct: 1140 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 1199
Query: 306 VLPDLVTYTTL--------------------------------MNGLCKEGKVREAHQLF 333
+ P VT TL + LC E KV A F
Sbjct: 1200 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFF 1259
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+++ + S D V+ A + GK
Sbjct: 1260 QKLLEKDSSADRVTLAAFTTACSESGK 1286
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 72/152 (47%)
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
E+ ++ + + + +A+ + +M ++ + PS T ++ +G A ++ DE
Sbjct: 749 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 808
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M G++PDS ++++ G + + +A+ L ++ I D + + E+G
Sbjct: 809 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 868
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++ + ++ + LGF PN + +I L K
Sbjct: 869 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 900
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
AD+LL + N++ + R ++ F IGR EAV ++ +M G+ P S
Sbjct: 734 TADSLL-----ANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNC 788
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
++ + AE + + + + D+ SY + DG + + ++ G
Sbjct: 789 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 848
Query: 586 FAPNNLTCKYMIHSL 600
F P+N TC ++ +L
Sbjct: 849 FIPDNATCTLILTAL 863
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 248/526 (47%), Gaps = 20/526 (3%)
Query: 74 SHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIV 133
S + L + PL P L + L R + D+ +A+ F P+ + ++
Sbjct: 78 SAVARLLSSSAPLTPAL----LHAALRRVRLDADAAVHLFRLAP----FPPSLLAHAQLL 129
Query: 134 HILAWNNKFSFAMKMLCELVELVKDCP----HSVDVFQDLISCTEDCNW---AYVKVGLI 186
HIL + + A +L L+ P H V+V+++ + A G +
Sbjct: 130 HILVRARRSADARAILASLLSARPPAPPLFPHLVEVYKEFSFSAASFDLLLRALANAGQL 189
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ + F + +G + S+ SCN +LN L + + V+E+M R G P+ T I+
Sbjct: 190 DGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIM 249
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+CK V F+E++ + G + +LV Y+ +++ YC+ G+ NDA + + R
Sbjct: 250 AKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGF 309
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRM-VHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P++VTYT L+ G C E + EA + + ++ L D + +I YC+ G+M+++
Sbjct: 310 SPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAA 369
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIV 423
LL EM+ + + + F I++ GY K GR++ A N++ E+ GV + D Y Y L+
Sbjct: 370 RLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT--GVGVRPDTYSYNSLVD 427
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ A + ++G+ + YN L++ C S+ DAL L M+ + I P
Sbjct: 428 GYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAP 487
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ + L+ F G++ +A++L E L G+ ++ +ING C + + +AE L+
Sbjct: 488 NEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELV 547
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D +Y +F+ + + GD+ + + LGFAP
Sbjct: 548 DKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPT 593
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 198/425 (46%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY KV + + + + +G + ++V+ + ++NG ++ + ++ + + G P
Sbjct: 252 AYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSP 311
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEE-EGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N T+ +L +C ++++ G +++I + + D + +I+ YC+ GR+ DA L
Sbjct: 312 NIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARL 371
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + +L Y ++NG CK G++ EAH + H M G+ PD SYN+L+ YCK
Sbjct: 372 LNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCK 431
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+G M ++ M+ NG T T +++G+ G + AL L + + G++ +
Sbjct: 432 KGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEIS 491
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ + + A +L + G + +N ++ LCK + + +A L D+M
Sbjct: 492 CSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMK 551
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P + TYR L +C IG A +++E+ G P + LI G+ + K
Sbjct: 552 QWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG 611
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
K +L + + +T +Y A+ + ++GDL L + G PN C ++
Sbjct: 612 KVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLV 671
Query: 598 HSLWK 602
++
Sbjct: 672 SCFYR 676
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 174/364 (47%), Gaps = 32/364 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN--ILTHVFCKNGDVDKVN 260
P I++ L +G K+ +D+ ++ E+ +G P FN I H K KVN
Sbjct: 557 PDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG--KVN 614
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L ++ G P+ V Y LI+ +CK+G L+ A+ LY M + ++P+L ++L++
Sbjct: 615 DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDI--------------------------VSYNTLIFA 354
++GK EA+ + +V + PDI + +N +IF
Sbjct: 675 YRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFG 734
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK G+++++K+LL ++ G D FT ++ G G + A +L + G++ +
Sbjct: 735 LCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPN 794
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y+ LI LC+ A SL +++ G P+ YN L++ CK + +A LK
Sbjct: 795 IVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQ 854
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY--CM 532
M++ I P++ TY LI C G EA+ L+D+M+E+ + P+ LI GY C
Sbjct: 855 RMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCE 914
Query: 533 EKDV 536
DV
Sbjct: 915 SVDV 918
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 205/448 (45%), Gaps = 26/448 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K GL+ ++F+T+ L GF + ++ N LL G L ID +++ M + GI P
Sbjct: 428 GYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAP 487
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + + L F K+G +K ++ G + T+NT+I+ CK R+ +A L
Sbjct: 488 NEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELV 547
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD++TY TL +G CK G + A ++ + + + G +P I +N+LI +
Sbjct: 548 DKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIA 607
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + +L+EM G+ P+T ++ G+ KEG L +A NL +E+ G+ + I
Sbjct: 608 KQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFIC 667
Query: 419 DYLIVALCQDNRPFAATSLLER-IGQDGY----VPSLEI--------------------- 452
L+ + + A +L+ +G D P LEI
Sbjct: 668 SSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIM 727
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N ++ LCK + DA L ++ D+ TY +LI G A L D ML
Sbjct: 728 WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTML 787
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ P+ LI G C ++++A +L K + +YN + + +DG ++
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +L++R + G P T +I+ L
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGL 875
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 26/302 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+ V+ L+ G K + + +Y EM G+ PN + L F + G D+
Sbjct: 624 GLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA 683
Query: 260 NGFLEKIEEEGFDPDL--------------------------VTYNTLISSYCKKGRLND 293
N L+ + PD+ + +N +I CK GR+ D
Sbjct: 684 NLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIED 743
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A L + + + D TY++L++G G V A L M+ GL+P+IV+YN+LI+
Sbjct: 744 AKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIY 803
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
CK G++ + SL ++ GI P+ T ++ + K+G + A L + G+
Sbjct: 804 GLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHP 863
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y LI LC A LL+++ ++ P+ Y L++ +C+SV ++
Sbjct: 864 TVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPL 923
Query: 474 DE 475
D+
Sbjct: 924 DQ 925
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 26/254 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQP------SIVSC----------NFLLNGLLKLNCID 222
+ K G + ++ + + ++ G P S+VSC N +L L+ + I
Sbjct: 638 GWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIP 697
Query: 223 QCWQVYEEMGRIG------ICPNTHT----FNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
E+G++ N H+ +NI+ CK G ++ L ++++GF
Sbjct: 698 DISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFV 757
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
D TY++LI G ++ AF L M + P++VTY +L+ GLCK G++ A L
Sbjct: 758 ADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSL 817
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F ++ +G+SP+ ++YNTLI +CK+G + E+ L M+ GI+P FT I++ G
Sbjct: 818 FKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCT 877
Query: 393 EGRLLSALNLVVEL 406
+G + A+ L+ ++
Sbjct: 878 QGYMEEAIKLLDQM 891
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G I ++ D GF + + L++G +D + + + M +G+ PN
Sbjct: 737 KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIV 796
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK+G++ + +K+ +G P+ +TYNTLI +CK G + +AF L + M
Sbjct: 797 TYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRM 856
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ P + TY+ L+NGLC +G + EA +L +M+ + P+ V+Y TLI Y +
Sbjct: 857 IEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 195/395 (49%), Gaps = 3/395 (0%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
++PS S N LL L++ + +D + + R + P+ TFNI+ FCK G + K
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAG 208
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY---LYRIMYRRNVLPDLVTYTTLM 317
+ I G P + TYNTLI YCK+G++ ++ L + M + + PD+VT+ L+
Sbjct: 209 DVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLI 268
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
NG CKE + A ++F M +G+ ++V+YN+L+ C+EGK+++S L+ EM G+
Sbjct: 269 NGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLA 328
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
T ++ G+ K+G ++ A V + + G+ + Y+ L+ + + A +
Sbjct: 329 CILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAA 388
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + G P+++ YN L+ L DEM ++ +K + TY LI C
Sbjct: 389 KDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCC 448
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G +AV L+DEM+E G+ P +ING+C + D A + K+ + + +
Sbjct: 449 KGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVT 508
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
YN F + G + + + L G PN +T
Sbjct: 509 YNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRIT 543
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 184/359 (51%), Gaps = 4/359 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV---YEEMGRIG 235
+ K G +R++ + G PS+ + N L++G K + + + V +EM + G
Sbjct: 197 GFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAG 256
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
I P+ TFN+L + +CK ++ +++ ++G ++VTYN+L+S C++G++ D+
Sbjct: 257 ISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSI 316
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + L T +++NG CK+G + EA + RG+ P++++YNTL+ Y
Sbjct: 317 KLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGY 376
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ GKM+E+ + M G GI P+ T ++ G+ S L+ E++ GV
Sbjct: 377 RRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADV 436
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI ALC A LL+ + + G P YN ++ C+ A ++
Sbjct: 437 VTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLR 496
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M R + ++ TY + FC +G+ EA +++EMLE G++P+ +I +IN +EK
Sbjct: 497 MEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPN-RITYEIINSGMIEK 554
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 166/332 (50%), Gaps = 3/332 (0%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ P + N L+++ + R++ A +R RR V PDL T+ +++G CK G++R+A
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAG 208
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEG---KMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+ + G++P + +YNTLI YCK G KM +LL EM+ GI PD T +++
Sbjct: 209 DVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLI 268
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY KE + +A+ + E+++ G+ + Y+ L+ LC++ + + L+E + + G
Sbjct: 269 NGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLA 328
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
L N ++ CK + +A D + R +KP++ TY L+ + +G+ EA +
Sbjct: 329 CILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAA 388
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D M G+ P+ + LI G+ +D LL +K D +YN +
Sbjct: 389 KDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCC 448
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G++ K ++L + +G P ++ +I+
Sbjct: 449 KGEVRKAVKLLDEMVEVGLEPKHVAYNTIING 480
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 134/267 (50%), Gaps = 9/267 (3%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y +V L K ++K++ E+ EL C ++S + K G++
Sbjct: 298 TYNSLVSGLCREGKVEDSIKLVEEMEELGLAC---------ILSTMNSVLNGFCKKGMMV 348
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ G +P++++ N L++G +L + + + M GI PN T+N L
Sbjct: 349 EAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLI 408
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
F + D V+G L++++E+G D+VTYN LI + C KG + A L M +
Sbjct: 409 TGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLE 468
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P V Y T++NG C++G + AH++ RM R ++V+YN + +CK GKM E+ +
Sbjct: 469 PKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVV 528
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEG 394
L EM+ G+ P+ T +II G ++G
Sbjct: 529 LNEMLEKGLVPNRITYEIINSGMIEKG 555
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 68/127 (53%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + +V+ N L+ L + + ++ +EM +G+ P +N + + FC+ GD
Sbjct: 431 GVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGA 490
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ ++E+ ++VTYN + +CK G++++A + M + ++P+ +TY + +G
Sbjct: 491 HEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG 550
Query: 320 LCKEGKV 326
+ ++G V
Sbjct: 551 MIEKGYV 557
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ K + ++VG +P V+ N ++NG + ++ M + N T+
Sbjct: 450 GEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTY 509
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
N+ FCK G +D+ N L ++ E+G P+ +TY + S +KG + D
Sbjct: 510 NVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPD 559
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 193/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF J+
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIPEA-KXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C ++ L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 XQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + + + L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 35/310 (11%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLET 329
Query: 574 LMELQKRFLR 583
E +KR ++
Sbjct: 330 AFEYRKRMIK 339
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 72/158 (45%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ + L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCK 288
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 170/355 (47%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + LD G P N L+ L++L + V++EM G+ +FN +
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C+ GD+D ++ E G PD+ TY LI C+ GR+ DA ++ M R +
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+ V +T L++ CK+G +L M RG+ PD V+YN ++ C+ ++ + +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ EM G+ PDT T ++ GY KE L A+ + + GV + Y LI L +
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A +L + + G P Y ++++ C+ V L L EM ++ KP + T
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 522
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
Y ++ FC +G+ A L++ M+ G+ PD +L++G+C V E L
Sbjct: 523 YNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 38/413 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + GL+ ++ L G + SC L++ + + Y ++ G+ P
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMS---RFPTAPEACAFYLQLLDAGLPPE 239
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
FN+L + G++ ++++ G +V++NT+IS C+ G L+ A L+R
Sbjct: 240 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 299
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M V PD+ TY L+ GLC+ G++ +A +F +M RG+ P+ V + LI A+CK+G
Sbjct: 300 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ L EM G+ PD T IV G + L SA +VVE++ G+
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL-------- 411
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
RP T Y L++ CK + + A+ +K MV
Sbjct: 412 ----------RPDTVT-----------------YTTLIDGYCKEEELDMAMEIKQNMVAE 444
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY ALI GRS +A ++ EM+E+G+ PD+ ++I+ +C + DV
Sbjct: 445 GVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 504
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
LL K + +YN + N F + G + L + +G +P+++T
Sbjct: 505 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDIT 557
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 164/340 (48%), Gaps = 5/340 (1%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V++G + + F + G + ++VS N +++G+ + +D ++ M G+ P+
Sbjct: 251 VRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV 310
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L C+ G ++ G EK+ G P+ V + LI ++CKKG L+R
Sbjct: 311 YTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHRE 370
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R V PD VTY ++NGLC+ ++ A + M GL PD V+Y TLI YCKE +
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + + M+ G+ D T ++ G K GR A ++ E+ G+ Y
Sbjct: 431 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 490
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I A C+ LL+ + G P + YN +M CK + +A +L + M++
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES-GMLPD 519
+ P TY L+ C G+ V+ ++E+ + G +PD
Sbjct: 551 VSPDDITYNILLDGHCKHGK----VTDIEELKSAKGTVPD 586
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ + + ++ G +P + +++ + + ++ +EM G P
Sbjct: 462 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVV 521
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N++ + FCK G + + L + G PD +TYN L+ +CK G++ D + +
Sbjct: 522 TYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD---IEELK 578
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ +PDL YT+++ + K+ + H
Sbjct: 579 SAKGTVPDLGVYTSIVGEIVKKKTTKTYH 607
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y +EG L A LV+ R G+ + L+ P A L+ + G P
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRF--PTAPEACAFYLQLL-DAGLPPE 239
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+++N LM L + +A A + DEM R ++ ++ ++ +I C G A +L
Sbjct: 240 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 299
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M E+G+ PD LI G C + A + + + + + + + G
Sbjct: 300 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
D ++EL + G P+ +T +++ L + + K
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLK 397
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 234/502 (46%), Gaps = 16/502 (3%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR +S AL FF + N K T + +++ LA + + +L ++ C
Sbjct: 50 LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S D+F +IS Y +VGL + + F + + G PS+ N +L+ LL N
Sbjct: 110 --SEDLFISVIS-------VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
I + VY +M R G PN T+N+L CKN VD L ++ +G PD V+Y
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
T+ISS C+ G + + R + R P + Y L+NGLCKE + A +L MV +
Sbjct: 221 TVISSMCEVGLVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+SP+++SY+TLI C G+++ + S L +M+ G +P+ +T +V+G G A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 400 LNLVVELQR-FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L+L ++ R FG+ + Y+ L+ C A S+ + + G P++ Y L+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
K S+ A+ + ++M+ P++ Y ++ C + EA SL++ M + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMEL 577
I G C ++ AE + ++ + + +YN + + A+ + + L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 578 QKRFLRLGFAPNNLTCKYMIHS 599
+ G ++ T ++H
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHG 537
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 202/453 (44%), Gaps = 24/453 (5%)
Query: 102 CQSDSVSALTFFN------WVKNDLEI----KPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
C D+VS T + VK E+ +P S Y +++ L + + A +++ E
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMRE 271
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+VE K +V + LI+ CN G I +F + L G P+I + + L
Sbjct: 272 MVE--KGISPNVISYSTLINVL--CN-----SGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 212 LNGLLKLNCIDQCWQVYEEMGR-IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+ G ++ +M R G+ PN +N L FC +G++ K +EE G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++ TY +LI+ + K+G L+ A Y++ M P++V YT ++ LC+ K +EA
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM-MGNGIYPDTFTCQIIVQG 389
L M +P + ++N I C G++ ++ + +M + P+ T ++ G
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K R+ A L E+ GV S Y+ L+ C P A L+ ++ DG P
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMV--DRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
N ++ + CK A + D + R +P + +Y +I C + V L
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++ M+ +G++P VLIN + ++ D+ +A
Sbjct: 623 LERMISAGIVPSIATWSVLINCFILD-DIVRAH 654
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 171/366 (46%), Gaps = 18/366 (4%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF ++ +G VD V L++++ +GF + ++IS Y + G A ++ +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P + Y +++ L E +++ + ++ M G P++ +YN L+ A CK K+
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQ-----GYGKEGRLLSALNLVVELQRFGVSISRD 416
+K LL EM G PD + ++ G KEGR L+ +RF +S
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA--------ERFEPVVS-- 247
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+Y+ LI LC+++ A L+ + + G P++ Y+ L+ LC + A +M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 477 VDRNIKPSLSTYRALI-CCFCGIGRSGEAVSLMDEMLES-GMLPDSQICRVLINGYCMEK 534
+ R P++ T +L+ CF G + +A+ L ++M+ G+ P+ L+ G+C
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLR-GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ KA ++ + + +Y ++ N FA+ G L + + + L G PN +
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 595 YMIHSL 600
M+ +L
Sbjct: 427 NMVEAL 432
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 6/333 (1%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F +T+ +I G+++ YL + M + + ++++ + G A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++F+R+ G P + YN ++ E ++Q + +M +G P+ FT ++++
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K ++ A L+VE+ G Y +I ++C+ L ER + P +
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVV 246
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+YN L+ LCK A L EMV++ I P++ +Y LI C G+ A S + +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDG 569
ML+ G P+ L+ G + A L + F + + +YN + F G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ K + + +G +PN T +I+ K
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + + L + +A K+ ++ E CP ++ + +L+ N
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQM-EQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL RE F G + S + N LL+G Q+ +M G P+ T
Sbjct: 514 GLTREIFMR-------GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 244 NILTHVFCKNGDVDKVNGFLEKIE--EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
N++ +CK G ++ L+ + + PD+++Y +I C+ D L M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
++P + T++ L+N + VR AH F
Sbjct: 627 ISAGIVPSIATWSVLINCFILDDIVR-AHDQF 657
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 195/394 (49%), Gaps = 11/394 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN-------- 177
+YC ++H L + S A K L ++V K + VF ++ T+ +
Sbjct: 2 SYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 60
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
Y++ G +R++ + +R T + F + C +L L+KL W Y+E+ G
Sbjct: 61 TXYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYP 120
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H FCK GD+ + I + G P +V++NTL++ Y + G L++ F L
Sbjct: 121 ASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 180
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ +GL P+ V++ TLI +CK
Sbjct: 181 KNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCK 240
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + +M+ + PD T + G K+G L A +L+ E+ G+ +
Sbjct: 241 NGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 300
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C++ A +R+ Q+ +Y L+ LC+ DA + EM+
Sbjct: 301 YTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 360
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+KP+ TY +I FC G L+ EM
Sbjct: 361 SVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 125/229 (54%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+++G + E F+ G QP + + + L+NGL K + +D ++++EM G+ P
Sbjct: 167 GYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVP 226
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TF L CKNG VD +++ + PDL+TYNTL CKKG L A L
Sbjct: 227 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLI 286
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD +TYTTL++G CKEG + A + RM+ + D V Y LI C+E
Sbjct: 287 DEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQE 346
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
G+ +++ +L EM+ G+ P+ T +I+ + K+G + + L+ E+Q
Sbjct: 347 GRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 143/364 (39%), Gaps = 70/364 (19%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI+ Y + G L DA YR+ R VL L+
Sbjct: 52 DIYVFSGLITXYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFY 111
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CKEG +R A +F + GL P +VS+NTL+ Y +
Sbjct: 112 KEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRL 171
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M +G+ PD +T Y
Sbjct: 172 GDLDEGFRLKNAMHASGVQPDVYT-----------------------------------Y 196
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++++ A L + + G VP+ + L++ CK V A+ + +M+
Sbjct: 197 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 256
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++ P L TY L C G +A L+DEM G+ PD LI+G C E D+
Sbjct: 257 QSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMET 316
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ D Y A+ + ++G ++ + L +G PN T +I+
Sbjct: 317 AFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIIN 376
Query: 599 SLWK 602
K
Sbjct: 377 EFCK 380
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 126/318 (39%), Gaps = 20/318 (6%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTLIF 353
+Y T+++ LC + EA L +V R DI ++ LI
Sbjct: 2 SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 61
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
Y + G ++++ + + C+ +++ K E+ G
Sbjct: 62 XYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 121
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
S ++ L+ C++ A S+ + I + G PS+ +N LM + + + LK
Sbjct: 122 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 181
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+C
Sbjct: 182 NAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 241
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
V+ A + + D +YN + + GDL + +L G P+ +T
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 301
Query: 594 KYMIHSLWK--GMERKFQ 609
+I K ME F+
Sbjct: 302 TTLIDGCCKEGDMETAFE 319
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 193/403 (47%), Gaps = 1/403 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++V+ N +++GL + + + ++ EM + G+ P+ T+ + CK +DK
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ GF P+ VTYN +I Y G+ + ++R M + ++P++VT + M+
Sbjct: 282 ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS 341
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK GK +EA + F M +G P++V+Y+ L+ Y EG + +L M GNGI D
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVAD 401
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ YGK G + + + ++Q GV Y +I A + R A
Sbjct: 402 QRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFN 461
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI-KPSLSTYRALICCFCGI 498
++ G P +Y+ L++ C ++ A L EM+ R I +P++ + ++I C
Sbjct: 462 QMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKE 521
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR EA + D ++ G PD LI+GY + + KA +L D SY
Sbjct: 522 GRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSY 581
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
N + + + +G + + L L G P +T ++H L+
Sbjct: 582 NTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 235/514 (45%), Gaps = 15/514 (2%)
Query: 95 ISRVLLRC-----QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
++ +LL+C +SD V L +L ++P + +Y +V L +++ A+ +L
Sbjct: 156 VASILLKCLYHAKRSDDVVNLLLHRM--PELGVEPDTISYNTVVKTLCEDSRSQRALDLL 213
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
+V+ C +V + +I + G + ++ F + + G P +V+
Sbjct: 214 HTMVKKSGGCSPNVVTYNTVI-------HGLFREGEVSKACNLFHEMMQQGVVPDVVTYT 266
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
+++ L K +D+ V +M G PN T+N + H + +G + G ++ +
Sbjct: 267 SIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQ 326
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G P++VT N+ +SS CK G+ +A + M + P+LVTY+ L++G EG +
Sbjct: 327 GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDM 386
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
LF+ M G+ D +N +I AY K G M E+ + +M G+ PD T I++
Sbjct: 387 LNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAA 446
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-P 448
+ + GRL A++ ++ G+ +Y LI C A L+ + G P
Sbjct: 447 FSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRP 506
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ +N ++ SLCK V +A + D ++ +P + T+ +LI + +G+ +A ++
Sbjct: 507 NIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVL 566
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D M+ +G+ PD LI+GYC ++ L G K T +Y + + D
Sbjct: 567 DAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFND 626
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G ++ + G + TC ++ L +
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 214/484 (44%), Gaps = 51/484 (10%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++H + + ++ M E+ S + ++++C + + K
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMT--------SQGLMPNIVTCNSYMS-SLCK 344
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +E+ + F G +P++V+ + LL+G C ++ M GI +
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRV 404
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FNI+ + K G +D+ +++E+G PD TY +I+++ + GRL DA + M
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS-PDIVSYNTLIFAYCKEGKM 361
+ P+ + Y +L+ G C G + +A +L M+ RG+ P+IV +N++I + CKEG++
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ + ++ G PD T ++ GYG G++ A FGV D +
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKA---------FGV------LDAM 569
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A G P + YN L++ C+ + D L+L EM+ + +
Sbjct: 570 ISA--------------------GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGV 609
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP+ TY ++ GR+ A + EM+ESG D C +++ G C ++A A
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA 669
Query: 542 L---LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ LG KF I N + + + + EL G PN T MI
Sbjct: 670 MFKKLGAMNVKFNI---AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIK 726
Query: 599 SLWK 602
+L K
Sbjct: 727 NLLK 730
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 181/362 (50%), Gaps = 1/362 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY K G++ E+ F + + G P + ++ ++ + + +M +G+ P
Sbjct: 411 AYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKP 470
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYL 297
++ L FC +G++ K + ++ G P++V +N++I+S CK+GR+ +A +
Sbjct: 471 EGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDI 530
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + PD++T+ +L++G GK+ +A + M+ G+ PD+VSYNTLI YC+
Sbjct: 531 FDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCR 590
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + L EM+ G+ P T T II+ G +GR + A + E+ G ++
Sbjct: 591 NGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ LC++N A ++ +++G ++ I N +++++ K +A L D +
Sbjct: 651 CGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSIS 710
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P+ STY +I G EA ++ M +SG P S++ +I + ++
Sbjct: 711 ATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIV 770
Query: 538 KA 539
KA
Sbjct: 771 KA 772
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 40/332 (12%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLF------------------------------ 333
R LP + TY LM+ C+ + LF
Sbjct: 113 RVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDD 172
Query: 334 ------HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM--GNGIYPDTFTCQI 385
HRM G+ PD +SYNT++ C++ + Q + LL+ M+ G P+ T
Sbjct: 173 VVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNT 232
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G +EG + A NL E+ + GV Y +I ALC+ A +L ++ +G
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ P+ YN ++ + + EM + + P++ T + + C G+S EA
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
D M G P+ VL++GY E L + D +N V + +
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ G + + M + + G P+ C Y I
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPD--ACTYGI 442
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 118/260 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y VG I ++F + G +P +VS N L++G + ID ++ EM G+ P
Sbjct: 552 GYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKP 611
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T T+ I+ H +G ++ E G D+ T ++ C+ ++A ++
Sbjct: 612 TTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMF 671
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + NV ++ T+++ + K K EA +LF + GL P+ +Y +I KE
Sbjct: 672 KKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKE 731
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++E+ ++ M +G P + I++ ++G ++ A N + ++ +S+
Sbjct: 732 GSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTV 791
Query: 419 DYLIVALCQDNRPFAATSLL 438
L+ ++ + + LL
Sbjct: 792 SLLMALFSREGKYWEDVKLL 811
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++E R P++ TY L+ C C R +L L++G+ D + +L+
Sbjct: 107 REEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYH 166
Query: 533 EKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGDLSKLMELQKRFLRL--GFAPN 589
K + LL + + DT SYN V ED + ++L ++ G +PN
Sbjct: 167 AKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPN 226
Query: 590 NLTCKYMIHSLWK 602
+T +IH L++
Sbjct: 227 VVTYNTVIHGLFR 239
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 193/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF+ ++
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLPEA-KNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G + ++ + FR T + F +C +L +KL W Y+E+
Sbjct: 69 FSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ ++I + G P +V++NTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G + + EM+ G PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVP 414
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 157/361 (43%), Gaps = 3/361 (0%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKI-EEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
N++ V + G D + E I E +G D+ ++ LI++Y + G L+DA +R+
Sbjct: 34 NLIQIVVSRKGK-DSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLT 92
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
T ++ K + + ++ G + +N L+ +CKEG+M
Sbjct: 93 REHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEM 152
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++S+ E+ G+ P + ++ GY + G L L + GV Y L
Sbjct: 153 RLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVL 212
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++++ A L + +G VP+ + L++ CK S+ A+ EM+ +
Sbjct: 213 INGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGF 272
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P L TY LI C G +A L+DEM G+ PD LI+G C E D+ A
Sbjct: 273 SPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALY 332
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
K+ D +Y A+ + +G ++ + L +G P+N T +I+
Sbjct: 333 YRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFC 392
Query: 602 K 602
K
Sbjct: 393 K 393
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 122/306 (39%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R D+ ++ L
Sbjct: 13 LHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G + ++ + + TC+ +++ + K E+ G
Sbjct: 73 ITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A S+ + I + G PS+ +N LM + + +
Sbjct: 133 PASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M ++P + TY LI C + +A L EM+ +G++P+ LI+G+C
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHC 252
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
++ A ++ D +YN + + GDL + +L G P+ +
Sbjct: 253 KTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 592 TCKYMI 597
T +I
Sbjct: 313 TYTTLI 318
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/578 (24%), Positives = 263/578 (45%), Gaps = 52/578 (8%)
Query: 69 LKKGDSHLTLLQNDLKPLLPH---LGAHEISRVL--LRCQSDSVSALTFFNWVKNDLEIK 123
LKK + + N + PL L + S VL L+ + + + AL FF + N K
Sbjct: 11 LKKQKPLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFK 70
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW----A 179
T Y ++ L + ++ L +L++L + ISC ED A
Sbjct: 71 HTPLTYTTMIKRLGYERDID-GIQYLLQLMKL------------EGISCNEDLFVIVINA 117
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + GL ++ KTF + + G +PS+ N +L+ LL N +Y M R GI N
Sbjct: 118 YRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELN 177
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA----- 294
+T+N+L CKN VD L ++ +G PD V+Y T++SS C+ G++ +A
Sbjct: 178 VYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSM 237
Query: 295 -------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
F L+ M + PD++TY+T++N L + G V A
Sbjct: 238 RIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMA 297
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ +M RG SP++ ++ +L+ Y G++ E+ L M+ G P+T ++ G
Sbjct: 298 LAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG 357
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
G+++ A+++ +++R GV + Y LI + A+ + ++ +G +P+
Sbjct: 358 LCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 417
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ +Y +++ LC+ AL L + M + N P+ T+ I C G++ A+ +++
Sbjct: 418 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M + G P+ +++G K +A ++G + + +YN + + F G
Sbjct: 478 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAG 537
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+++ + L G P+++T +I++ K E K
Sbjct: 538 MFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVK 575
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 119/495 (24%), Positives = 227/495 (45%), Gaps = 24/495 (4%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
+N +K D I+ Y +++ L N++ A K+L E+ K C + ++S
Sbjct: 165 IYNNMKRD-GIELNVYTYNMLLKALCKNDRVDAARKLLAEMS--YKGCIPDAVSYTTVVS 221
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ ++G + E+ + L + + + N L+NG + + +++ ++++ EM
Sbjct: 222 -------SMCRLGKVEEA-----RELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEM 269
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
GI P+ T++ + + + G+V+ L K+ G P++ T+ +L+ Y GRL
Sbjct: 270 AVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRL 329
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+A L+ M + P+ V Y TL++GLC GK+ EA + +M G+ P+ +Y+TL
Sbjct: 330 CEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTL 389
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I + K G + + + +M+ NG P+ +V + AL+L+ +
Sbjct: 390 IDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNC 449
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ ++ I LC + A +L ++ Q G P++ YNE+++ L +AL
Sbjct: 450 PPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQ 509
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ E+ + IK +L TY ++ FC G A+ + ++L G PDS +I YC
Sbjct: 510 IVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYC 569
Query: 532 MEKDVNKAEALLGFFAKKFQIY-DTESYNAVF----NMFAEDGDLSKLMELQKRFLRLGF 586
+ +V A L+ KK + Y D +Y ++ N D + L + + G
Sbjct: 570 KQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHL----DKMINEGI 625
Query: 587 APNNLTCKYMIHSLW 601
PN T ++ L+
Sbjct: 626 CPNRATWNALVRGLF 640
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 205/434 (47%), Gaps = 8/434 (1%)
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
E CN ++ L E+ FR+ D ++ S N LL LL + Q ++EM
Sbjct: 229 ESCNAVLSRLPL-DEAIALFRELPD----KNVCSHNILLKALLSAGRLKDACQHFDEMSS 283
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
P+ T+ + H +C G+++ L+++ +G + + Y ++I+ C KG+++D
Sbjct: 284 P---PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSD 340
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A + M V D V +TT+++G C +G + A +LF M RGL+ D V++ LI
Sbjct: 341 ALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALIN 400
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C+ G+++E+ +L EM+ G+ D T +++ GY K G ++ A + E+ V+
Sbjct: 401 GLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAP 460
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y L LC+ AA LL + G ++ YN L+ LCK ++ A+ +
Sbjct: 461 NVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIM 520
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM + + TY LI C G A +++ EML+ G+ P VL+NG+CM
Sbjct: 521 TEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMS 580
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
V + LL + +K + +YN++ + D ++ E+ K APN T
Sbjct: 581 GRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTY 640
Query: 594 KYMIHSLWKGMERK 607
+I K K
Sbjct: 641 NILIKGHCKARNMK 654
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 192/399 (48%), Gaps = 9/399 (2%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+++ P Y +VH + A+K+L E+ K + V+ +I+ CN
Sbjct: 279 DEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMA--AKGLESNATVYTSVIALL--CN 334
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
G + ++ + G V +++G + +++EEM + G+
Sbjct: 335 K-----GQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ T L + C+ G++ + + L+++ ++G D D+VTY LI YCK+G + +AF +
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M R V P++VTYT L +GLCK+G VR A++L H M ++GL ++ +YN+LI CK
Sbjct: 450 HNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCK 509
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G ++++ ++ EM G D +T ++ K G A N++ E+ G+ S
Sbjct: 510 FGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIAT 569
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ C R LLE + + P++ YN LM+ C ++ + M
Sbjct: 570 YNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMH 629
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ + P+ +TY LI C EA+ EM+E G+
Sbjct: 630 SQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGL 668
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 170/353 (48%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ +V E+M G+ + F + FC GD+ E++++ G D VT+
Sbjct: 338 VSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTA 397
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ C+ G L +A + + M + + D+VTYT L++G CK G + EA ++ + MV R
Sbjct: 398 LINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR 457
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
++P++V+Y L CK+G ++ + LL+EM G+ + +T ++ G K G L A+
Sbjct: 458 VAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAM 517
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ E++ G Y LI LC+ A ++L+ + G PS+ YN LM
Sbjct: 518 RIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGF 577
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C V L + M+++N++P++ TY +L+ +C + M + P+
Sbjct: 578 CMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNE 637
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+LI G+C +++ +A +K SY+A+ + + S+
Sbjct: 638 NTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSE 690
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 156/341 (45%), Gaps = 35/341 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++E+ + ++ +D G +V+ L++G K + + ++V+ EM + PN
Sbjct: 404 RAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVV 463
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L+ CK GDV N L ++ +G + ++ TYN+LI+ CK G L A + M
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
D+ TYTTL++ LCK G+ AH + M+ +G+ P I +YN L+ +C G++
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ K LL M+ + P+ T Y+ L
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVT-----------------------------------YNSL 608
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C D + T + + + P+ YN L++ CK ++ +AL EM+++ +
Sbjct: 609 MKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGL 668
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ + S+Y ALI + EA D+M G+ + +
Sbjct: 669 RLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 148/300 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+F+ + + P++V+ L +GL K + ++ EM G+
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+N L + CK G++++ + ++E G D+ TY TLI + CK G + A +
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P + TY LMNG C G+V +L M+ + + P++V+YN+L+ YC +
Sbjct: 556 QEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCID 615
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + + M + P+ T I+++G+ K + AL E+ G+ ++ Y
Sbjct: 616 KNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSY 675
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI L + + A +++ +G ++Y+ M+ D++ + L DE+V+
Sbjct: 676 SALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 204/443 (46%), Gaps = 39/443 (8%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + +G + + + N L+ G N + + + +M P+ ++N + V CK
Sbjct: 36 FSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCK 95
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G +++ L ++ G P+ T+N L+S YCK G L +A + IM R NVLPD+ T
Sbjct: 96 KGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRT 155
Query: 313 YTTLMNGLCKEGKVREA-----------------------------------HQLFHRMV 337
YTTL+ GLCK+GK+ EA +L M
Sbjct: 156 YTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEME 215
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+G+ P+ V+YN ++ Y KEGKM + + L +M +G PD T + GY K GRL
Sbjct: 216 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLS 275
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A ++ E+ R G+ ++ + ++ LC + + A LL + GY Y L+
Sbjct: 276 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 335
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
K DEM ++ I PS+ TY +I C G++ +++ +E+LESG++
Sbjct: 336 MGYFKVGKSXXW----DEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLV 391
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD +I GYC E V+KA KK D + N + +G L K ++L
Sbjct: 392 PDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKL 451
Query: 578 QKRFLRLGFAPNNLTCKYMIHSL 600
K ++ G A + +T +I L
Sbjct: 452 FKTWISKGKAIDAVTFNTIISGL 474
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 217/506 (42%), Gaps = 49/506 (9%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
++ P+ + N I+D++C K ++ LL L P+ I VS
Sbjct: 77 FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNIL----------VS 126
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
W+K E+ + I+A NN V +
Sbjct: 127 GYCKLGWLKEAAEV----------IDIMARNNVLP------------------DVRTYTT 158
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI K G I E+F+ + ++ P +V+ N L+NG + + + +++
Sbjct: 159 LIG-------GLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELI 211
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+EM G+ PN T+N++ + K G +D L K+EE GF PD VT+NTL + YCK
Sbjct: 212 DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKA 271
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
GRL++AF + M R+ + + VT T+++ LC E K+ +A++L RG D VSY
Sbjct: 272 GRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSY 331
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
TLI Y K GK EM I P T ++ G + G+ +++ EL
Sbjct: 332 GTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLE 387
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ + Y+ +I+ C++ + A ++ + + P L N L+ LC +
Sbjct: 388 SGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDK 447
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL L + + T+ +I C GR EA L+ EM E + PD +++
Sbjct: 448 ALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILS 507
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYD 554
+ +AE + ++ ++ D
Sbjct: 508 ALADAGRMKEAEEFMSGIVEQGKLQD 533
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 190/433 (43%), Gaps = 39/433 (9%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P VS N +L+ L K +++ + +M G+ PN +TFNIL +CK G + +
Sbjct: 81 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG--- 319
++ + PD+ TY TLI CK G++++AF L M +LP +VTY L+NG
Sbjct: 141 IDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFE 200
Query: 320 --------------------------------LCKEGKVREAHQLFHRMVHRGLSPDIVS 347
KEGK+ A +M G SPD V+
Sbjct: 201 CSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 260
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+NTL YCK G++ E+ ++ EM G+ ++ T I+ E +L A L+
Sbjct: 261 FNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSAS 320
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G + Y LI+ + + + + + +PS+ Y ++ LC+
Sbjct: 321 KRGYFVDEVSYGTLIMGYFK----VGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTD 376
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ +E+++ + P +TY +I +C G+ +A ++M++ PD C +L+
Sbjct: 377 QSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILV 436
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C E ++KA L + K + D ++N + + E+G + +L
Sbjct: 437 RGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLG 496
Query: 588 PNNLTCKYMIHSL 600
P+ T ++ +L
Sbjct: 497 PDCYTHNAILSAL 509
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 209/462 (45%), Gaps = 13/462 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y I+ +L K + A +L ++ + + F L+S Y K+
Sbjct: 81 PDNVSYNTILDVLCKKGKLNEARDLLLDMKN--NGLFPNRNTFNILVS-------GYCKL 131
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + P + + L+ GL K ID+ +++ +EM + + P+ T+
Sbjct: 132 GWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTY 191
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L + + K ++++E +G P+ VTYN ++ Y K+G++++A R M
Sbjct: 192 NMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEE 251
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD VT+ TL NG CK G++ EA ++ M +GL + V+ NT++ C E K+ +
Sbjct: 252 SGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDD 311
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL G + D + ++ GY K G+ E++ + S Y +I
Sbjct: 312 AYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXW----DEMKEKEIIPSIITYGTMIG 367
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ + + + + G VP YN ++ C+ V A +++MV ++ KP
Sbjct: 368 GLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKP 427
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L T L+ C G +A+ L + G D+ +I+G C E +A LL
Sbjct: 428 DLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLL 487
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+K D ++NA+ + A+ G + + E + G
Sbjct: 488 AEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQG 529
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 3/333 (0%)
Query: 273 PDLVTYNTLISS---YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
P+L+T NTLI + Y K + + ++ + + V + T+ L+ G C E K+ EA
Sbjct: 8 PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L +M H PD VSYNT++ CK+GK+ E++ LL +M NG++P+ T I+V G
Sbjct: 68 IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K G L A ++ + R V Y LI LC+D + A L + + +P
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L+ +C S L DEM + +KP+ TY ++ + G+ A + +
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M ESG PD L NGYC +++A ++ ++K ++ + N + + +
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L +L + G+ + ++ +I +K
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK 340
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ ++ K F+ + G V+ N +++GL + ++ + + EM + P+ +T
Sbjct: 443 GMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTH 502
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEG-----------------------FDPDLVTYNT 280
N + G + + F+ I E+G DP+ V ++
Sbjct: 503 NAILSALADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSE 562
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
I+ C +G+ DA ++ + ++ ++ TY +LM GL K
Sbjct: 563 QINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 192/399 (48%), Gaps = 11/399 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN----- 177
+ T +YC ++H L + S A K L E+V K + VF ++ +
Sbjct: 12 RHTLHSYCTMIHFLCTHQMLSEA-KSLIEVVVSRKGKGSASAVFAAVLETKGNQRSDIYV 70
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + +C +L L+KL W YEE+
Sbjct: 71 FSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 130
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK+GD+ + I + G P +V+YNTL++ Y + G L+
Sbjct: 131 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 190
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M PD+ TY+ L+NGLCKE K+ A++LF M+ +GL P+ V++ TLI
Sbjct: 191 EGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLI 250
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 251 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLK 310
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ Q+ Y L+ LC+ DA +
Sbjct: 311 PDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKM 370
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
EM+ + P TY +I FC G + L+ EM
Sbjct: 371 LREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 144/341 (42%), Gaps = 35/341 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA YR+ R VL L+
Sbjct: 67 DIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFY 126
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CK+G +R A +F + GL P +VSYNTL+ Y +
Sbjct: 127 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 186
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M+ +G PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 187 GDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTF 246
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ +P L YN L+ LCK + A L DEM
Sbjct: 247 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSX 306
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 307 KGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 366
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
AE +L D +Y + N F + GD+ K +L K
Sbjct: 367 AEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLK 407
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 192/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF ++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAP 414
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYAPSV 416
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK G ++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G +P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 139/353 (39%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + + G + +N L+ ++ KEG+++ ++S+
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY K G L L +Q GV
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQ--------------- 203
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+D + P+ T
Sbjct: 204 --------------------PDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A+ L +
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++G L E +KR ++ +++ +I L
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K ++ +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 194/400 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV + LL+ + K+ D E+M +G+ N +T+NI+ + C+ +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G+ P +VT N+L++ +C R+++A L M PD VT+TTL++GL +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y +I CK G+ + +LL +M I D
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K + ALNL E+ G+ Y LI LC R A+ LL +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L DEM+ R+I P++ TY +LI FC R
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + M+ LPD LING+C K V L +++ + +T +Y +
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + G PN +T ++ L K
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 190/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N LL L +D+ ++ EM + P+ F+ L K D V F EK+E G
Sbjct: 39 NALLHLK-LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+L TYN +I+ C++ +L+ A + M + P +VT +L+NG C ++ EA L
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+MV G PD V++ TL+ + K E+ +L+ M+ G PD T ++ G K
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G ALNL+ ++++ + IY +I +LC+ A +L + G P +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LC +DA L +M++R I P++ T+ +LI F G+ EA L DEM+
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P+ LING+CM +++A+ + K + D +YN + N F + +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
MEL + R G N +T +IH ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 190/408 (46%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +G+ PSIV+ N LLNG N I + + ++M +G P+T TF L H ++
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+ +E++ +G PDLVTY +I+ CK+G + A L M + + D+V Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T+++ LCK V +A LF M ++G+ PD+ +Y++LI C G+ ++ LL +M+
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
I P+ T ++ + KEG+L+ A L E+ + + + Y+ LI C +R A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + +P + YN L+ CK V D + L +M R + + TY LI
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F A + +M+ G+ P+ L++G C + KA + + K D
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN + + G + +L G P+ + MI K
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 235/522 (45%), Gaps = 47/522 (9%)
Query: 120 LEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
+EI S N Y ++++ L ++ SFA+ +L ++++L S+ L++
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL--GYGPSIVTLNSLLN----- 143
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ I E+ + +++G+QP V+ L++GL + N + + E M G
Sbjct: 144 --GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE---------------------------- 268
P+ T+ + + CK G+ D L K+E+
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 269 -------EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+G PD+ TY++LIS C GR +DA L M R + P++VT+ +L++
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KEGK+ EA +LF M+ R + P+IV+YN+LI +C ++ E++ + M+ PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ G+ K +++ + L ++ R G+ + Y LI Q + A + +++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG P++ YN L++ LCK + A+++ + + ++P + TY + C G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+ L + G+ PD +I+G+C + +A L + + D+ +YN +
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
DGD + EL K FA + T + L G
Sbjct: 562 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 10/333 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + N I+P Y ++ L ++S A ++L +++E + +V F
Sbjct: 259 ALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE--RKINPNVVTFNS 315
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A+ K G + E+ K F + + P+IV+ N L+NG + +D+ Q++
Sbjct: 316 LID-------AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M P+ T+N L + FCK V + G + VTY TLI + +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
++A +++ M V P+++TY TL++GLCK GK+ +A +F + + PDI +Y
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N + CK GK+++ L + G+ PD ++ G+ K+G A L ++++
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
G Y+ LI A +D A+ L++ +
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 197/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L ++ K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLHSYCTMIHFLC-THQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G IR++ + FR T + F +C +L L+KL W Y+E+
Sbjct: 69 FSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL+S Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ EA++LF+ M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +++ G PD T ++ G K+G L A +L+ E+ +
Sbjct: 249 DGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
M+ +KP TY +I FC G L+ EM G +P
Sbjct: 369 LRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 143/329 (43%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G + DA +R+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
++ G + +N L+ +CKEG+M+ ++S+ + G+ P + ++ GY +
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L + GV Y LI LC++++ A L + +G VP+ +
Sbjct: 185 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTF 244
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ CK V A+ + +++ + P L TY LI C G +A L+DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSM 304
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI+G C E D+ A K+ D +Y A+ + ++G
Sbjct: 305 KELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + L +G P+N T +I+ K
Sbjct: 365 AEKMLRGMLSVGLKPDNGTYTMIINEFCK 393
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 233/534 (43%), Gaps = 21/534 (3%)
Query: 62 VDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLE 121
V+ IC ++++ D L N L + L + +VL Q+D+ +AL FF W
Sbjct: 154 VNKICKAIEE-DQWECLQDNFLNSMAQDLNPDAVVKVL-NLQTDAQNALRFFQWADKQEG 211
Query: 122 IKPTSSNYCLIVHILAWNNKF----SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+ Y ++ IL F S KM + E+ + HS +
Sbjct: 212 YDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVM------------ 259
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSC--NFLLNGLLKLNCIDQCWQVYEEMGRIG 235
+Y + G +ES + F ++G++P ++ N +L L+K +D ++ +M G
Sbjct: 260 -SYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNG 318
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ N T+ + F ++ L+ + + + PD+VTY +IS+ CK+ + A+
Sbjct: 319 VSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAY 378
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ + M P++ TY L+ GLC + EA +L M G+ P+I +Y L
Sbjct: 379 GVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGL 438
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK ++ +K + E + G+ P+ T ++ GY + RL+ A++++ E+ + +
Sbjct: 439 CKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDH 498
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI L Q N+ A + + + GY + + N L L + + DA +
Sbjct: 499 VTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRR 558
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M DR S S Y I C G EA +L+ EM+ G P+ +I G+C +
Sbjct: 559 MKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGR 618
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
++ A+A+L F + DT SYN + F G +L L G N
Sbjct: 619 LDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLN 672
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 196/398 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N + + E+M +GI + +T++I + FC+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R++DA L M PD T+TTL++GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L +MV RG PD+V+Y T++ CK G + + +LL +M I +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + A++L E++ G+ + Y+ LI LC R A+ LL +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L +EM+ R+I P TY LI FC R
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + M+ LP+ Q LING+C K V L +++ + +T +Y +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F + GD + K+ + + +T ++H L
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 216/477 (45%), Gaps = 12/477 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L H + + I+C + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTYSIFINC-------FCRR 131
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ + K + +G++P IV+ + LLNG I + ++M +G P+T TF
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L H + + ++++ + G PDLVTY T+++ CK+G ++ A L M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++V + T+++ LCK V A LF M +G+ P++V+YN+LI C G+ +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M+ I P+ T ++ + KEG+L+ A L E+ + + Y+ LI
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C NR A + + + +P+++ YN L+ CKC V D + L EM R +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY +I F G A + +M+ + + D +L++G C ++ A +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ K + YN + + G + + +L F L P+ +T MI L
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGL 545
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 212/451 (47%), Gaps = 13/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP + + ++H L +NK S A+ ++ ++V+ + C + + +++ K
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ--RGCQPDLVTYGTVVN-------GLCK 235
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I + K + ++V N +++ L K ++ ++ EM GI PN T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L + C G + L + E+ +P++VT+N LI ++ K+G+L +A L+ M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD +TY L+NG C ++ EA Q+F MV + P+I +YNTLI +CK +++
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ +T T I+QG+ + G SA + ++ V Y L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + A + + + + ++ IYN ++E +CK V +A D +IK
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW---DLFCSLSIK 532
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + TY +I C EA L +M E G LP+S LI + D + L
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + + V NM DG L K
Sbjct: 593 IKEMRSSGFVGDASTISLVTNML-HDGRLDK 622
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 193/393 (49%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L N L + +D ++ +M + P+ FN L K + V E+++ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
DL TY+ I+ +C++ +L+ A + M + PD+VT ++L+NG C ++ +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD ++ TLI K E+ +L+ +M+ G PD T +V G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + ALNL+ +++ + + I++ +I +LC+ A L + G P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ LC +DA L M+++ I P++ T+ ALI F G+ EA L +E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD+ +LING+CM +++A+ + F K + + ++YN + N F +
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ +EL + + G N +T +I ++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 228/513 (44%), Gaps = 53/513 (10%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y + ++ ++ S A+ +L ++++L + D+++ + N Y I +
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYE--------PDIVTLSSLLN-GYCHSKRISD 171
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + +++G++P + L++GL N + + ++M + G P+ T+ + +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK GD+D L K+E ++V +NT+I S CK + A L+ M + + P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++VTY +L+N LC G+ +A +L M+ + ++P++V++N LI A+ KEGK+ E++ L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD------IYDYLI 422
EM+ I PDT T +++ G+ RL A Q F +S+D Y+ LI
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAK------QMFKFMVSKDCLPNIQTYNTLI 405
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ R L + Q G V + Y +++ + A ++ +MV +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 483 PSLSTYRALICCFCGIGRSGEAV-------------------SLMDEMLESGML------ 517
+ TY L+ C G+ A+ ++++ M ++G +
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 518 -------PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
PD +I+G C ++ + +A+ L + + ++ +YN + D D
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ EL K GF + T + + L G
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y L+++ +N+ A +M +V KDC ++ + LI+ +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS--KDCLPNIQTYNTLIN-------GFC 409
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + + + FR+ G + V+ ++ G + D V+++M + +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL H C G +D + +++ + ++ YNT+I CK G++ +A+ L+ +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ PD+VTY T+++GLC + ++EA LF +M G P+ +YNTLI A ++
Sbjct: 530 ---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
S L+ EM +G D T ++ +GRL
Sbjct: 587 AASAELIKEMRSSGFVGDASTISLVTNML-HDGRL 620
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 203/401 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ + +++G K +++ +++EM + GI P+ T++ + H CK +DK F
Sbjct: 217 PDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAF 276
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ +G P+ TYN LI Y G+ +A +++ M R ++LPD+VT + LM LCK
Sbjct: 277 LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +P++ SY ++ Y +G + + L M+G+GI PD +T
Sbjct: 337 YGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 396
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y+ L++ C S+ A L E+++ + + + ++I C +GR
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G+ P + + +L++GYC+ + KA + + Y +
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + + L + L+ G P+ + +I L++
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 174/342 (50%), Gaps = 2/342 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+F R+ ++ G P+ + N L+ G + +V++EM R I P+ T ++L
Sbjct: 274 EAF--LRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK G + + + + +G +P++ +Y +++ Y KG L D L+ +M +
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 391
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T+ L+ G + +A +F+ M G+ PD+V+Y T+I A C+ GKM ++
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G+ PD + ++QG+ G LL A L+ E+ G+ + + +I LC+
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A ++ + G P+ +Y+ LM+ C + AL + D MV I+P+
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
Y L+ +C IGR E +SL EML+ G+ P + + ++I+G
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 194/404 (48%), Gaps = 46/404 (11%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ N N L FC+ D+ ++ L + E G PD+ +Y+ L+ S C
Sbjct: 134 FGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 193
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + PD+V Y+T+++G KEG V +A LF MV RG+ PD
Sbjct: 194 DQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPD 253
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V+Y++++ A CK M ++++ L +M+ G+ P+ +T ++ GY G+ A+ +
Sbjct: 254 FVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 313
Query: 405 ELQRFG--------------------VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R + +RD++D + + Q+ F+
Sbjct: 314 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK-GQNPNVFSYTIMLNGYATK 372
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P + +N L+++ C + A+++ +EM D +KP + TY
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
R +I C IG+ +A+ ++M++ G+ PD LI G+C + KA+ L+
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF---LRLGFAPN 589
D ++++ N + L ++M+ Q F + +G P
Sbjct: 493 NGMHLDIVFFSSIINNLCK---LGRVMDAQNIFDLTVNVGLHPT 533
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 35/394 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P++ S +LNG C+ +++ M GI P+ +
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 395
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L + G +DK ++ + G PD+VTY T+I++ C+ G+++DA + M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V PD +V +++++N LCK G+V
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ GL P V Y+ L+ YC GKM+++ + M+ GI P+ +
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y+ +I L + R A + + G
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ L K +A+ L E+ N+K ++ T +I R EA
Sbjct: 636 AMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKD 695
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
L + SG++P ++I E V +AE
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAE 729
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 180/366 (49%), Gaps = 2/366 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G++ ++ F + D G +P +V+ ++ L ++ +D + + +M G+ P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + ++ L FC +G + K + +I G D+V ++++I++ CK GR+ DA ++
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + P V Y+ LM+G C GK+ +A ++F MV G+ P+ V Y TL+ YCK
Sbjct: 523 DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKI 582
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E SL EM+ GI P T II+ G + GR + A E+ G+++++ Y
Sbjct: 583 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 642
Query: 419 DYLIVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ ++ L + NR F A L + + ++ N ++ + + V +A L +
Sbjct: 643 NIVLRGLFK-NRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS 701
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P + TY +I G EA + M +G PDS++ ++ + ++
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761
Query: 538 KAEALL 543
+A A L
Sbjct: 762 RAGAYL 767
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 170/402 (42%), Gaps = 14/402 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FN ++ D +KP Y ++ L K AM+ ++++ + +
Sbjct: 413 AMIIFNEMR-DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID--QGVAPDKYAYHC 469
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI CT G + ++ + + ++ G IV + ++N L KL +
Sbjct: 470 LIQGFCTH---------GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G+ P +++L +C G ++K + + G +P+ V Y TL++ YC
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K GR+++ L+R M ++ + P + Y +++GL + G+ A FH M G++ +
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN ++ K E+ L E+ + + T ++ G + R+ A +L +
Sbjct: 641 TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI 700
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
R G+ Y +I L ++ A + + G P + N ++ L K + +
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
A ++ +RN T L+ F G E + +
Sbjct: 761 VRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 140/335 (41%), Gaps = 3/335 (0%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P TY L+ + R A + + R + +++ L+ G C+ + EA
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166
Query: 331 Q-LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIV 387
L HR G PD+ SY+ L+ + C +GK ++ LL M G PD ++
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ KEG + A +L E+ + G+ Y ++ ALC+ A + L ++ G +
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P+ YN L+ +A+ + EM +I P + T L+ C G+ EA +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D M G P+ +++NGY + + L D ++N + +A
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L K M + G P+ +T + +I +L +
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 209/419 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ K F + + P+ ++ N +++G +K ++ ++++ +M R G+ PN
Sbjct: 200 KAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVI 259
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L C+ G + + L+++ PD TY+ L + + G L+
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ V T + L+NGLCK+GK+ +A ++ +V+ GL V YNTLI YC+ G +
Sbjct: 320 VKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDL 379
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + S+ +M I PD T ++ G GK R+ A +LV+E+++ GV+ S + ++ L
Sbjct: 380 EGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTL 439
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A + + +L + + G P++ Y ++ + CK + +A+ + D+M +++
Sbjct: 440 IDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDV 499
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P Y A+I + G + +A L ++M SG+ P +LI G C + +++AE
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL D SYN + + + + +EL+K + G P+ T + + SL
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSL 618
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 212/449 (47%), Gaps = 35/449 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G + F+ + + L G +P++++ N LL+GL + + + V +EM + P
Sbjct: 232 GHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVP 291
Query: 239 NTHTFNIL-----------------------------------THVFCKNGDVDKVNGFL 263
+ T++IL + CK+G + K L
Sbjct: 292 DGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVL 351
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ + G V YNTLI+ YC+ G L AF +++ M R + PD +TY L+NGL K
Sbjct: 352 QTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKV 411
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
++ EAH L M G++P + ++NTLI AY + G++++ +L +M G+ P+ +
Sbjct: 412 ERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSY 471
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
IV + K G++L A+ ++ ++ V +Y+ +I A + A L E++
Sbjct: 472 GSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKS 531
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PS+ YN L++ LCK +++A L D + + + P + +Y LI C +
Sbjct: 532 SGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDR 591
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ L EM + G+ P + R+L + V++ E L K + + YN + +
Sbjct: 592 ALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVD 651
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+A+ G+ SK+ L+K G A + T
Sbjct: 652 AYAKCGEESKVEALRKEMSDKGIAVGDYT 680
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 169/335 (50%), Gaps = 1/335 (0%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFY 296
P+T T+N GD+D+ G L ++ +G P+ +YN +I+ K G DA
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L+ M + V+P+ +TY T+++G K+G + +L+ +M+ GL P++++YN L+ C
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ G+M E+ ++L EM + PD FT I+ G+ + G + L+L E + GV I
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
L+ LC+D + A +L+ + G + + IYN L+ C+ + A + +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
R I+P TY ALI + R EA L+ EM ++G+ P + LI+ Y +
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
K +L +K + SY ++ N F ++G +
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKI 484
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 190/403 (47%), Gaps = 3/403 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI-CPNTHTFNILTHVFCKNG-DVDKV 259
+P + N + + +D+ + MG G PN ++N++ K G D D V
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +++ E+ P+ +TYNT+I + KKG L F L+ M R + P+++TY L++G
Sbjct: 209 KLF-DEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSG 267
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ G++ E + M R + PD +Y+ L + + G Q SL E + G+
Sbjct: 268 LCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+TC I++ G K+G++ A ++ L G+ + IY+ LI CQ A S+ +
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQ 387
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ P YN L+ L K + + +A L EM + PS+ T+ LI + G
Sbjct: 388 QMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAG 447
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ + ++ +M E G+ P+ ++N +C + +A A+L K + + YN
Sbjct: 448 QLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYN 507
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A+ + + E G + L ++ G P+ +T +I L K
Sbjct: 508 AIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCK 550
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 211/447 (47%), Gaps = 14/447 (3%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ P N ++ +C + + G++ L + + ++P + I DS +
Sbjct: 252 HGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQT 311
Query: 109 ALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
L+ F VK ++I + + ++++ L + K S A ++L LV + ++
Sbjct: 312 MLSLFEESVKKGVKIGAYTCS--ILLNGLCKDGKISKAEEVLQTLVN--SGLLQTTVIYN 367
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y ++G + +F F++ +P ++ N L+NGL K+ I + +
Sbjct: 368 TLIN-------GYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDL 420
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM + G+ P+ TFN L + + G ++K L ++E+G P++V+Y ++++++CK
Sbjct: 421 VIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCK 480
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +A + M+ ++VLP Y +++ + G +A L +M G+ P IV+
Sbjct: 481 NGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVT 540
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN LI CK+ ++ E++ LL + G+ PD + ++ AL L E+
Sbjct: 541 YNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMW 600
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G+ S Y L +L R +L +++ VP IYN ++++ KC +
Sbjct: 601 KCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEES 660
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICC 494
L+ EM D+ I ++ Y ++ C
Sbjct: 661 KVEALRKEMSDKGI--AVGDYTSMTNC 685
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 134/316 (42%), Gaps = 1/316 (0%)
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL-SPDIVS 347
GR D + ++ PD T+ + G + EA + RM G +P+ S
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN +I K G ++ L EM + P+ T ++ G+ K+G L S L ++
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
R G+ + Y+ L+ LC+ R ++L+ + VP Y+ L + +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
L L +E V + +K T L+ C G+ +A ++ ++ SG+L + I LI
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
NGYC D+ A ++ + D +YNA+ N + +++ +L + G
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVN 430
Query: 588 PNNLTCKYMIHSLWKG 603
P+ T +I + +
Sbjct: 431 PSVETFNTLIDAYGRA 446
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/527 (26%), Positives = 240/527 (45%), Gaps = 30/527 (5%)
Query: 83 LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKF 142
LK L+P L + L D ++AL FF W++ + + + ++ +L +
Sbjct: 44 LKTLIPSLTPSLLCS-LFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTL 102
Query: 143 SFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD---- 198
A + +++ SCT + ++ + L+R T D
Sbjct: 103 RAAENVRNSMIK----------------SCTSPHDATFL-LNLLRR-MNTAAAAADHQHQ 144
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM---GRIGICPNTHTFNILTHVFCKNGD 255
+ F+ S+ S N LL L + + +D+ +Y+EM + PN T N + + +CK G+
Sbjct: 145 LAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGN 204
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
+ F +I PDL TY +L+ YC+ + A ++ +M RRN V+YT
Sbjct: 205 MAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTN 260
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L++GLC+ GK+ EA + + RM G P + +Y L+ A C+ G+ E+ SL EM G
Sbjct: 261 LIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERG 320
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
P+ +T +++ KEGR+ AL ++ E+ GV+ S ++ LI + C+ A
Sbjct: 321 CEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAV 380
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+L + P++ YNEL+ C+ S+ A+ L ++MV+ + P + TY LI
Sbjct: 381 GVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C +G A L M+ G PD + C V +A +L +K +
Sbjct: 441 CEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANE 500
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+Y A+ + + + G + L KR L PN++T MI L K
Sbjct: 501 HAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 203/419 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E+ + + + + G P++ + L+ L + + ++ EM G PN +
Sbjct: 267 EAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVY 326
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L CK G +D+ L ++ E+G P +V +N LI SYCK+G + DA + +M
Sbjct: 327 TYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLM 386
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P++ TY L+ G C+ + A L ++MV LSPD+V+YNTLI C+ G +
Sbjct: 387 ESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVV 446
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L M+ +G PD +T + + GR+ A ++ L+ V + Y L
Sbjct: 447 DSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A SL +R+ + +P+ +N +++ L K V DA+LL ++M ++
Sbjct: 507 IDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KP+L TY L+ A +++ ++ SG P+ I YC + + +AE
Sbjct: 567 KPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEE 626
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + + D+ YN + N + G L + +R G P+ LT ++ L
Sbjct: 627 MVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL 685
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 227/454 (50%), Gaps = 9/454 (1%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
++FS +M+ E++ D +SV F +LI+ N +Y K+G + + F + L
Sbjct: 162 SRFSMVDEMISLYKEMLTDNGNSV--FPNLITLNTMLN-SYCKLGNMAVARLFFVRILRC 218
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
P + + L+ G + + +++ V+ M R N ++ L H C+ G + +
Sbjct: 219 EPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPR----RNAVSYTNLIHGLCEAGKLHEA 274
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F ++ E+G P + TY L+ + C+ GR +A L+ M R P++ TYT L++
Sbjct: 275 LEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDY 334
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCKEG++ EA ++ + MV +G++P +V +N LI +YCK G M+++ +L M + P+
Sbjct: 335 LCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPN 394
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ G+ + + A+ L+ ++ +S Y+ LI LC+ +A+ L
Sbjct: 395 VRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFR 454
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +DG+ P +N M LC+ V +A + + + ++++K + Y ALI +C G
Sbjct: 455 LMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAG 514
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT-ESY 558
+ A SL ML LP+S V+I+G E V A L+ A KF + T +Y
Sbjct: 515 KIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA-KFDVKPTLHTY 573
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N + ++ D + E+ R + G+ PN +T
Sbjct: 574 NILVEEVLKEYDFDRANEILNRLISSGYQPNVVT 607
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 202/437 (46%), Gaps = 10/437 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F+ ++ D PT Y ++V L + + A+ + E+ E + C +V +
Sbjct: 274 ALEFWARMRED-GCFPTVRTYTVLVCALCESGRELEALSLFGEMRE--RGCEPNVYTYTV 330
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI K G + E+ K + ++ G PS+V N L+ K ++ V
Sbjct: 331 LID-------YLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVL 383
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M +CPN T+N L FC+ +D+ L K+ E PD+VTYNTLI C+
Sbjct: 384 GLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEV 443
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ A L+R+M R PD T+ M LC+ G+V EAHQ+ + + + + +Y
Sbjct: 444 GVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAY 503
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
LI YCK GK++ + SL M+ P++ T +++ G KEG++ A+ LV ++ +
Sbjct: 504 TALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAK 563
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
F V + Y+ L+ + ++ A +L R+ GY P++ Y +++ C + +
Sbjct: 564 FDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEE 623
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A + ++ + + Y LI + +G A ++ M +G P +L+
Sbjct: 624 AEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK 683
Query: 529 GYCMEKDVNKAEALLGF 545
+EK + +G
Sbjct: 684 HLVIEKHKKEGSNPVGL 700
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 244/569 (42%), Gaps = 96/569 (16%)
Query: 102 CQSD-SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S + AL+ F ++ + +P Y +++ L + A+KML E+VE K
Sbjct: 301 CESGRELEALSLFGEMR-ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVE--KGVA 357
Query: 161 HSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKT-------------------------- 192
SV F LI C V V + ES K
Sbjct: 358 PSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMAL 417
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
K ++ P +V+ N L++GL ++ +D +++ M R G P+ TFN C+
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCR 477
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G V + + LE ++E+ + Y LI YCK G++ A L++ M LP+ +T
Sbjct: 478 MGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537
Query: 313 YTTLMNGLCKEGKVREA-----------------------------------HQLFHRMV 337
+ +++GL KEGKV++A +++ +R++
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G P++V+Y I AYC +G+++E++ ++ ++ G+ D+F +++ YG G L
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALC------QDNRPFA------------------ 433
SA ++ + G S Y L+ L + + P
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSK 717
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L E++ + G VP+L Y++L+ LCK + A L M + I PS +
Sbjct: 718 IDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIH 777
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+L+ C +G GEAV+L+D M+E L + ++LI G + + KAEA+ +
Sbjct: 778 NSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLR 837
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
YD ++ + + A+ G + + EL
Sbjct: 838 CGYNYDEVAWKVLIDGLAKTGYVDQCSEL 866
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 18/253 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY +GL+ +F R+ G +PS ++ + L+ L V E+ + G P
Sbjct: 649 AYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHL-----------VIEKHKKEGSNP 697
Query: 239 NTHTFNILTHVFCKNGDVDKVNGF------LEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+ LT++ N D+ F EK+ E G P+L TY+ LI+ CK GRLN
Sbjct: 698 VGLDVS-LTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLN 756
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
AF LY M + P + + +L++ CK G EA L M+ + SY LI
Sbjct: 757 VAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLI 816
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
++ ++++++ ++ G D ++++ G K G + L+ +++ G
Sbjct: 817 CGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCR 876
Query: 413 ISRDIYDYLIVAL 425
+ + Y L+ L
Sbjct: 877 LHPETYSMLMQEL 889
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 177/376 (47%), Gaps = 3/376 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + LD G P N L+ L++L + V++EM G+ +FN +
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C+ GD+D ++ E G PD+ TY LI C+ GR+ DA ++ M R +
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+ V +T L++ CK+G +L M RG+ PD V+YN ++ C+ ++ + +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ EM G+ PDT T ++ GY KE L A+ + + GV + Y LI L +
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A +L + + G P Y ++++ C+ V L L EM ++ KP + T
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y ++ FC +G+ A L++ M+ G+ PD +L++G+C V E L +
Sbjct: 399 YNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KS 455
Query: 548 KKFQIYDTESYNAVFN 563
K + D Y ++
Sbjct: 456 AKGTVPDLGVYTSIVG 471
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 187/413 (45%), Gaps = 38/413 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + GL+ ++ L G + SC L++ + + Y ++ G+ P
Sbjct: 59 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMS---RFPTAPEACAFYLQLLDAGLPPE 115
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
FN+L + G++ ++++ G +V++NT+IS C+ G L+ A L+R
Sbjct: 116 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 175
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M V PD+ TY L+ GLC+ G++ +A +F +M RG+ P+ V + LI A+CK+G
Sbjct: 176 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 235
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ L EM G+ PD T IV G + L SA +VVE++ G+
Sbjct: 236 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL-------- 287
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
RP T Y L++ CK + + A+ +K MV
Sbjct: 288 ----------RPDTVT-----------------YTTLIDGYCKEEELDMAMEIKQNMVAE 320
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY ALI GRS +A ++ EM+E+G+ PD+ ++I+ +C + DV
Sbjct: 321 GVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 380
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
LL K + +YN + N F + G + L + +G +P+++T
Sbjct: 381 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDIT 433
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 160/339 (47%), Gaps = 3/339 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V++G + + F + G + ++VS N +++G+ + +D ++ M G+ P+
Sbjct: 127 VRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV 186
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L C+ G ++ G EK+ G P+ V + LI ++CKKG L+R
Sbjct: 187 YTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHRE 246
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R V PD VTY ++NGLC+ ++ A + M GL PD V+Y TLI YCKE +
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + + M+ G+ D T ++ G K GR A ++ E+ G+ Y
Sbjct: 307 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 366
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I A C+ LL+ + G P + YN +M CK + +A +L + M++
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ P TY L+ C + G+ + + G +PD
Sbjct: 427 VSPDDITYNILLDGHC---KHGKVTDIEELKSAKGTVPD 462
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++ + + ++ G +P + +++ + + ++ +EM G P
Sbjct: 338 KAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVV 397
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N++ + FCK G + + L + G PD +TYN L+ +CK G++ D + +
Sbjct: 398 TYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD---IEELK 454
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ +PDL YT+++ + K+ + H
Sbjct: 455 SAKGTVPDLGVYTSIVGEIVKKKTTKTYH 483
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 3/218 (1%)
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y +EG L A LV+ R G+ + L+ P A L+ + G P
Sbjct: 59 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRF--PTAPEACAFYLQLL-DAGLPPE 115
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+++N LM L + +A A + DEM R ++ ++ ++ +I C G A +L
Sbjct: 116 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 175
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M E+G+ PD LI G C + A + + + + + + + G
Sbjct: 176 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 235
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
D ++EL + G P+ +T +++ L + + K
Sbjct: 236 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLK 273
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 4/411 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I E+ + F + +D QP + L+ GL ++ + M +G P+T
Sbjct: 57 EAGRIDEAVELFGE-MD---QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTR 112
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + C+ + L+++ E+G P +VT +I++YCK+GR++DA + +M
Sbjct: 113 AYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 172
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R P++ TY L+ G C EGKV +A L ++M G++PD V+YN LI C +G +
Sbjct: 173 KLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHI 232
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + LL M G+G+ D +T ++ K+GR A +L L+ G+ + ++ L
Sbjct: 233 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSL 292
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A LE++ G P Y+ +E LCK + L EM+ +++
Sbjct: 293 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 352
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KPS Y +I G EM+ SG PD + YC+E +N+AE
Sbjct: 353 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 412
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+L +K DT +YN + + A G + + K+ + PN T
Sbjct: 413 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 463
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 180/397 (45%), Gaps = 39/397 (9%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R G P+ +TFN L +C+ VD +K+ GF D+V+Y TLI C+ GR
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGL------------------------------ 320
+++A L+ M + PD+ Y L+ GL
Sbjct: 61 IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 321 -----CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
C+E K +EA ++ M +GL+P +V+ +I AYCKEG+M ++ +L M G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
P+ +T +VQG+ EG++ A+ L+ +++ GV+ Y+ LI C D +A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
LL + DG + YN L+ +LCK A L D + R IKP+ T+ +LI
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G++ A +++M+ +G PD+ I C K + + +G +K T
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+Y V + ++ + + + G P+ +T
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 393
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 131/537 (24%), Positives = 226/537 (42%), Gaps = 63/537 (11%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCN 177
+L +P++ Y +V K A +ML E+ E + C +++CT N
Sbjct: 104 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPC---------VVTCTAVIN 154
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY K G + ++ + G +P++ + N L+ G + + + +M G+
Sbjct: 155 -AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 213
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+N+L C +G ++ L +E +G D TYN LI++ CK GR + A L
Sbjct: 214 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 273
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + R + P+ VT+ +L+NGLCK GK A + +MV G +PD +Y++ I CK
Sbjct: 274 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 333
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIV------------------------------ 387
QE S + EM+ + P T I++
Sbjct: 334 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 393
Query: 388 -----QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+ Y EGRL A N+++E+ + GV++ Y+ L+ + A S+L+++
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK-----------------PSL 485
VP+ Y L+ L + V D L L V + I+ P+
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +++ F GR+ EA SL+ M E + + I L+ +C K A L+
Sbjct: 514 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 573
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ I SY + + +G K E+ ++P+ + K +I L K
Sbjct: 574 MIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 630
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 190/413 (46%), Gaps = 23/413 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F+ R G + N L+N L K DQ +++ + GI PN TF
Sbjct: 230 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 289
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + CK+G D FLEK+ G PD TY++ I CK + M +
Sbjct: 290 NSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 349
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++V P V YT +++ L KE + + MV G +PD+V+Y T + AYC EG++ E
Sbjct: 350 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI- 422
++++L EM NG+ DT ++ G+ G+ A++++ ++ ++ Y L+
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 469
Query: 423 ----VALCQDNRPFAAT------------SLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ L +D P L + + ++ ++P+ Y+ ++E +
Sbjct: 470 HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRT 529
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L M + +I + Y AL+ CFC R +A L+ M++ G +P + L
Sbjct: 530 EEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHL 589
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTES--YNAVFNMFAEDG--DLSKLM 575
++G E +KA+ + F +++ Y + + + + + G D+S+ M
Sbjct: 590 LSGLICEGQTDKAKEI--FMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREM 640
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 157/370 (42%), Gaps = 33/370 (8%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G+ PD T+N+LI YC+ +++ A L+ M R D+V+Y TL+ GLC+ G++ EA
Sbjct: 5 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64
Query: 330 HQLF-------------------------------HRMVHRGLSPDIVSYNTLIFAYCKE 358
+LF RM G P +Y ++ C+E
Sbjct: 65 VELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRE 124
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +E++ +L EM G+ P TC ++ Y KEGR+ AL ++ ++ G + Y
Sbjct: 125 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 184
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ C + + A +LL ++ G P YN L+ C + A L M
Sbjct: 185 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 244
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ TY ALI C GR+ +A SL D + G+ P++ LING C +
Sbjct: 245 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 304
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L DT +Y++ + + + L+ P+ + +IH
Sbjct: 305 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 364
Query: 599 SLWKGMERKF 608
L K ER +
Sbjct: 365 KLLK--ERNY 372
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 145/302 (48%), Gaps = 4/302 (1%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R PD T+ +L+ G C+ +V A LF +M RG + D+VSY TLI C+ G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L EM PD +V+G R L ++ ++ G S Y
Sbjct: 61 IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ C++ + A +L+ + + G P + ++ + CK ++DAL + + M R
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
KP++ TY AL+ FC G+ +A++L+++M G+ PD+ +LI G C++ + A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL I D +YNA+ N +DG + L G PN +T +I+ L
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 601 WK 602
K
Sbjct: 297 CK 298
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 130/322 (40%), Gaps = 26/322 (8%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++KP++ NY +++H L + + E+V S D+++ T AY
Sbjct: 351 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV--------SSGCNPDVVTYTTSMR-AY 401
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G + E+ + G ++ N L++G + D + ++M + PN
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 241 HTFNILTHVFC-----------------KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
T+ IL K ++ V G + +++ F P+ TY++++
Sbjct: 462 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 521
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ + GR +A L +M ++ + YT L+ CK + +A L M+ G P
Sbjct: 522 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 581
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++SY L+ EG+ ++K + PD ++I+ G K+G + ++
Sbjct: 582 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 641
Query: 404 VELQRFGVSISRDIYDYLIVAL 425
+ L+R S Y L L
Sbjct: 642 IMLERMNCRPSHQTYAMLTEEL 663
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 178/370 (48%), Gaps = 1/370 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ + FRK +D+GF+P++++ L++GL K I Q +++ EEM R G PN +T
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G +K FL+ + + + P++ TY ++I YCK+ +LN A L+ M
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P++ TYTTL+NG CK G A++L + M G P+I +YN I + CK+ +
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL + G+ D T I++Q K+ + AL + + G + + LI
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A C+ + + L + + G +P+ E Y ++ CK + AL M
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY +LI C EA L + M++ G+ P L YC D A L
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Query: 543 LGFFAKKFQI 552
L KK I
Sbjct: 626 LEPLDKKLWI 635
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 212/424 (50%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ ++G + E+ + G PS ++ N +L ++L I+ V++EM G+ P+
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ ++ ++ ++G + + + +L + + GF PD T ++++ C+ G +N A + +R
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M P+L+ +T+L++GLCK+G +++A ++ MV G P++ ++ LI CK G
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 360 KMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ L +++ + Y P+ T ++ GY KE +L A L ++ G+ + + Y
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L+ +G +G++P++ YN ++SLCK +A L ++
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ TY LI C +A++ M ++G D ++ +LI +C +K + +
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+E L I E+Y ++ + + ++GD+ ++ R G P++ T +I
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Query: 599 SLWK 602
L K
Sbjct: 577 GLCK 580
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F + GF+ + N L+ + + + ++++ + +G+ P T+
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ +CK GD+D + ++ G PD TY +LIS CKK +++A LY M R
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 306 VLPDLVTYTTL--------------------------------MNGLCKEGKVREAHQLF 333
+ P VT TL + LC E KV A F
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFF 658
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+++ + S D V+ A + GK
Sbjct: 659 QKLLEKDSSADRVTLAAFTTACSESGK 685
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 72/152 (47%)
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
E+ ++ + + + +A+ + +M ++ + PS T ++ +G A ++ DE
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M G++PDS ++++ G + + +A+ L ++ I D + + E+G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++ + ++ + LGF PN + +I L K
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
AD+LL + N++ + R ++ F IGR EAV ++ +M G+ P S
Sbjct: 133 TADSLL-----ANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNC 187
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
++ + AE + + + + D+ SY + DG + + ++ G
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 247
Query: 586 FAPNNLTCKYMIHSL 600
F P+N TC ++ +L
Sbjct: 248 FIPDNATCTLILTAL 262
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 204/436 (46%), Gaps = 19/436 (4%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I + +F + L + PS V N LL + K+ + +M GI PN +T +I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC V L KI + G PD T+ TLI C +G++ +A +L+ M
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+VTY TL+NGLCK G A +L MV + P++ +YNT+I + CK+ ++ E+
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+L EM+ GI PD FT ++ L+ E+ + ++ ++ AL
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C++ + A +++++ Q G P++ Y LM+ C + +A+ + D MV + P++
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341
Query: 486 STYRALICCFCGIGR-------------------SGEAVSLMDEMLESGMLPDSQICRVL 526
+Y LI +C I R EAV + D M+ G +P+ L
Sbjct: 342 ISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTL 401
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
INGYC + ++KA L G ++ I DT +Y+ + + L + L +
Sbjct: 402 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 461
Query: 587 APNNLTCKYMIHSLWK 602
PN +T + ++ L K
Sbjct: 462 IPNLVTYRILLDYLCK 477
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 19/399 (4%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+I + + L+N LN + + V ++ ++G P+T TF L C G + +
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEA 150
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+K+ EGF PD+VTY TLI+ CK G + A L M ++N P++ Y T+++
Sbjct: 151 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ +V EA LF MV +G+SPDI +YN+LI A C + + +LL EM+ + I PD
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ +V KEG++ A ++V ++ + GV + Y L+ C + A + +
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSV-------------------ADALLLKDEMVDRN 480
+ G +P++ YN L+ CK + +A+ + D MV +
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKG 390
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P++ +Y LI +C I R +A+ L EM ++PD+ LI+G C + + A
Sbjct: 391 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 450
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
AL QI + +Y + + ++ L++ M L K
Sbjct: 451 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK 489
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 215/479 (44%), Gaps = 36/479 (7%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLIS--CTEDCN 177
I P ++++ N+ FA +L ++++L H D F LI C E
Sbjct: 92 IPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL----GHQPDTATFTTLIRGICVE--- 144
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
G I E+ F K + GF+P +V+ L+NGL K+ ++ M +
Sbjct: 145 ------GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQ 198
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN +N + CK+ V + ++ +G PD+ TYN+LI + C L
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M ++PD+V++ T+++ LCKEGKV EAH + +M+ RG+ P++V+Y L+ +C
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA-------------LNLVV 404
+M E+ + M+ G P+ + ++ GY K R+ A LN+
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDE 378
Query: 405 ELQRFGVSISRDI------YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
++ F + + Y+ LI C+ R A L + + +P Y+ L+
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 438
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LC + + DA+ L EMV + P+L TYR L+ C EA++L+ + S + P
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 498
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
D Q+ + I+G C ++ A L + K D +Y+ + N G L + +L
Sbjct: 499 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 557
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 187/404 (46%), Gaps = 19/404 (4%)
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N ID + M R+ P+T FN L K + +++ G P++
Sbjct: 37 LHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI 96
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T + LI+S+C R+ AF + + + PD T+TTL+ G+C EGK+ EA LF +
Sbjct: 97 YTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDK 156
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G PD+V+Y TLI CK G + LL M+ P+ F I+ K+ +
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 216
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A NL E+ G+S Y+ LI ALC +LL + +P + +N
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNT 276
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++++LCK V +A + D+M+ R ++P++ TY AL+ C + EAV + D M+ G
Sbjct: 277 VVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG 336
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGF---------FAKKFQIYDTE---------- 556
+P+ LINGYC + ++KA + +++DT
Sbjct: 337 CMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVI 396
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
SYN + N + + + K M L R P+ +T +IH L
Sbjct: 397 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 440
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/514 (24%), Positives = 228/514 (44%), Gaps = 49/514 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y +++ L S A+++L +V+ K+C +V + +I + K
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ--KNCQPNVFAYNTIID-------SLCK 213
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ E+F F + + G P I + N L++ L L + EM I P+ +
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN + CK G V + + ++K+ + G +P++VTY L+ +C +++A ++ M
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVR-------------------EAHQLFHRMVHRGLSP 343
+ +P++++Y TL+NG CK ++ EA ++F MV +G P
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMP 393
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+++SYNTLI YCK ++ ++ L EM + PDT T ++ G RL A+ L
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
E+ + Y L+ LC++ A +LL+ I P +++ N ++ +C+
Sbjct: 454 HEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRA 513
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ A L + + ++P + TY +I C G EA L EM E+G + I
Sbjct: 514 GELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIY 573
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+ G+ + ++A LL + D + M ++DG L + K+ LR
Sbjct: 574 NTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG----LDQSLKQILR 629
Query: 584 LGFAPNNLTCKYM----------IHSLWKGMERK 607
G CK++ +H L KG+ +
Sbjct: 630 NG-------CKWISTFDSSSSTGLHILQKGISHE 656
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 152/327 (46%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+++N S ++ A + M R P V + L+ + K L H+
Sbjct: 27 LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G+ P+I + + LI ++C ++ + S+L +++ G PDT T +++G EG+
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL+L ++ G Y LI LC+ AA LL + Q P++ YN
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++SLCK V +A L EMV + I P + TY +LI C + +L++EM++S
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
++PD +++ C E V +A ++ ++ + +Y A+ + ++ + +
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAV 326
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + G PN ++ +I+ K
Sbjct: 327 KVFDTMVCKGCMPNVISYNTLINGYCK 353
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 198/417 (47%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E K G P +V N L++G + + + + EM G P T+
Sbjct: 1163 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGS 1222
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + K GD++K+ ++ + GF P++ YN++I + CK A + + M+
Sbjct: 1223 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG 1282
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD++T+ TL+ GLC EG VR+A + R L+P+ +SY LI +C G++ +
Sbjct: 1283 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1342
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL EMMG G PD T ++ G G++ AL + ++ V +IY+ LI L
Sbjct: 1343 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ AA ++LE + + P +Y L++ + +++ DA + + M + I P +
Sbjct: 1403 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+ A+I +C G EA+ M M + G +PD +I+GY + ++N A L
Sbjct: 1463 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1522
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K+ + +Y+++ N + + GD L +PN +T +I SL+K
Sbjct: 1523 MIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFK 1579
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 198/425 (46%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY G++ ++ K + + G P + CN LL L++ D ++Y+EM
Sbjct: 1085 AYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSG 1144
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ +L C V++ +E G P +V YN LI YC++G + L
Sbjct: 1145 ADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLL 1204
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + LP LVTY +L+N L K+G + + LF M RG SP++ YN++I A CK
Sbjct: 1205 LGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCK 1264
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ +L +M +G PD T ++ G EG + A + + E R ++ ++
Sbjct: 1265 CRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLS 1324
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C A+ LL + G+ P + + L+ L V++AL+++++M
Sbjct: 1325 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1384
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+R + P ++ Y LI C A ++++EMLE + PD + LI+G+ +++
Sbjct: 1385 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1444
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + F K D S NA+ + + G +S+ + ++G P+ T +I
Sbjct: 1445 DARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1504
Query: 598 HSLWK 602
K
Sbjct: 1505 SGYAK 1509
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 201/478 (42%), Gaps = 85/478 (17%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P++V+ L+N L K +++ ++ EM + G PN +N + CK +
Sbjct: 1212 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQA 1271
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ G DPD++T+NTLI+ C +G + A + R RR + P+ ++YT L++G
Sbjct: 1272 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1331
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C G++ A L M+ RG +PD+V++ LI GK+ E+ + +M ++PD
Sbjct: 1332 FCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1391
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+++ G K+ L +A N++ E+ V +Y LI + A + E
Sbjct: 1392 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1451
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALL----------LKDE-------------- 475
+ G P + N +++ C+ +++A+L + DE
Sbjct: 1452 FMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1511
Query: 476 -----------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM---------------- 508
M+ R KP++ TY +LI +C G + A L
Sbjct: 1512 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYT 1571
Query: 509 ---------DEMLESGML----------PDSQICRVLINGY------------CMEKDVN 537
D++L +G+ P+ L+NG C +V+
Sbjct: 1572 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1631
Query: 538 KAEALLGFFAK-KFQIYDTE--SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ALL F K F I D +YNA+ L + ++ + R + G+ PN +T
Sbjct: 1632 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 1689
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 193/470 (41%), Gaps = 31/470 (6%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
F P Q N ++D +C + + L Q P + + + C V
Sbjct: 1247 GFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFN-TLITGLCHEGHVRK 1305
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQ 167
F E+ P +Y ++H + A +L E++ H+ DV F
Sbjct: 1306 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGR----GHTPDVVTFG 1361
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI V G + E+ K + P + N L++GL K + +
Sbjct: 1362 ALIH-------GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNI 1414
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEM + P+ + L F ++ ++ E +E +G PD+V+ N +I YC+
Sbjct: 1415 LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQ 1474
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G +++A M + +PD TYTT+++G K+G + A + M+ R P++V+
Sbjct: 1475 FGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVT 1534
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y++LI YCK G ++ L M + P+ T I++ K+ ++L A L E
Sbjct: 1535 YSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA-GLYFETM 1593
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLL----ERIGQDGYV------------PSLE 451
D+ + +V P S+ E G+D + P
Sbjct: 1594 LLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNS 1653
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
YN ++ SLC+ + + +AL K+ M + P+ T+ +L+ FC +G+S
Sbjct: 1654 AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1703
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 164/387 (42%), Gaps = 21/387 (5%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ L++GL+ + + V E+M + P+ + +N+L CK +
Sbjct: 1352 GHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAA 1411
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE++ E+ PD Y TLI + + L DA ++ M + + PD+V+ ++ G
Sbjct: 1412 KNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKG 1471
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+ G + EA M G PD +Y T+I Y K+G + + L +M+ P+
Sbjct: 1472 YCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPN 1531
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ GY K G A L +Q +S + Y LI +L + ++ A E
Sbjct: 1532 VVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFE 1591
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVA--------------DALLLKDEMVDRNI-KPS 484
+ + P+ + L+ L C DALL+ + + +I P
Sbjct: 1592 TMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPR 1651
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S Y A+I C EA+ + M + G +P+ L+ G+C V K+
Sbjct: 1652 NSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC---SVGKSVNWRT 1708
Query: 545 FFAKKFQIYDTE---SYNAVFNMFAED 568
+FQ + E Y +F+ +A +
Sbjct: 1709 ILPNEFQQEEFEIIFRYKFLFDQYATE 1735
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIG-QDGYVPSLEIYNELMESLCKCDSVAD 468
G + +R L+ A AT + ER+ Q G +P + N L++ L + D
Sbjct: 1071 GAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 1130
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L DEM+ ++ + L+ C R E + L++ +G +P VLI+
Sbjct: 1131 ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1190
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GYC D+ + LLG K + +Y ++ N + GDL K+ L + GF+P
Sbjct: 1191 GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1250
Query: 589 NNLTCKYMIHSLWK 602
N +I +L K
Sbjct: 1251 NVQIYNSVIDALCK 1264
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 207/423 (48%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G I F K L G+ PS V+ N L+ GL + + ++++ G N +
Sbjct: 355 MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 414
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ L + CK GD L KI+ P++ Y+T+I + CK +++A+ L+ M
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 474
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + D+VTY+TL+ G C GK++EA L + MV + ++PD+ +Y L+ A KEGK++
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVK 534
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+KS+L M+ + PD FT ++ GY + A ++ + GV+ Y LI
Sbjct: 535 EAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 594
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ A +L + + Q VP Y+ L++ LCK ++ L DEM DR
Sbjct: 595 NGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQP 654
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +LI C G +A++L ++M + G+ P++ +L++G C + A+ +
Sbjct: 655 ADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEV 714
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D YN + + G L + + + + G PN +T +I++L+K
Sbjct: 715 FQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFK 774
Query: 603 GME 605
E
Sbjct: 775 KDE 777
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 200/404 (49%), Gaps = 2/404 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHT 242
G ++++ K L GFQ + VS L+NG+ K+ ++ ++ GR+ PN
Sbjct: 391 GQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL-TKPNVEM 449
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ + CK V + G ++ +G D+VTY+TLI +C G+L +A L M
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + PD+ TYT L++ L KEGKV+EA + M+ + PD+ +YNTL+ Y +++
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++ + M G+ PD T I++ G+ K + ALNL E+ + + Y L+
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R L++ + G + YN L++ LCK + A+ L ++M D+ I+
Sbjct: 630 DGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR 689
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P+ T+ L+ C GR +A + ++L G D I V+I G+C + + +A +
Sbjct: 690 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTM 749
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
L + I + +++ + N + + K +L ++ + G
Sbjct: 750 LSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 186/362 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + K RK +P++ + +++ L K + + + ++ EM GI +
Sbjct: 424 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 483
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L + FC G + + G L ++ + +PD+ TY L+ + K+G++ +A + +M
Sbjct: 484 TYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVM 543
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V PD+ TY TLMNG +V++A +F+ M G++PD+ +Y LI +CK +
Sbjct: 544 LKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMV 603
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L EM + PDT T +V G K GR+ +L+ E++ G Y+ L
Sbjct: 604 DEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSL 663
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ A +L ++ G P+ + L++ LCK + DA + +++ +
Sbjct: 664 IDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGY 723
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ Y +I C G EA++++ +M E+G +P++ ++IN + + +KAE
Sbjct: 724 HLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEK 783
Query: 542 LL 543
LL
Sbjct: 784 LL 785
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 208/425 (48%), Gaps = 11/425 (2%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
S K L G+ P V+ N L+ GL + + ++++ G N ++ L +
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C+ GD FL KI+ P++ YNT+I + CK +++A+ L+ M + +
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++VTY+TL+ G C GK++EA L + MV + ++P++ +YN L+ A CKEGK++E+KS+L
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M+ + + T ++ GY + A ++ + GV+ Y+ +I C+
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A +L + + + P ++ +N++++S K + A+ L + + I+P L T
Sbjct: 287 KRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFA 547
LI CFC +G+ S++ ++L+ G P + LI G C++ V KA A
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN--------NLTCKYMIHS 599
+ FQ+ + SY + N + GD ++L ++ PN + CKY + S
Sbjct: 406 QGFQL-NQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 464
Query: 600 LWKGM 604
G+
Sbjct: 465 EAYGL 469
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 227/499 (45%), Gaps = 11/499 (2%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+ +A+ F + L KP Y I+ L S A + E+ VK +V
Sbjct: 112 GDTRAAIKFLRKIDGRLA-KPNVEMYNTIIDALCKYQLVSEAYGLFSEMT--VKGISANV 168
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ LI + + VG ++E+ + P++ + N L++ L K + +
Sbjct: 169 VTYSTLI-------YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKE 221
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
V M + + N T++ L + +V K + G PD+ +YN +I+
Sbjct: 222 AKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMIN 281
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+CK R++ A L++ M P ++ + +++ K A L HR+ +G+ P
Sbjct: 282 GFCKIKRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP 340
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D+ + N LI +C G++ S+L +++ G P T T +++G +G++ AL+
Sbjct: 341 DLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFH 400
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+L G +++ Y LI +C+ A LL +I P++E+Y+ ++++LCK
Sbjct: 401 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 460
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
V++A L EM + I + TY LI FC +G+ EA+ L++EM+ + PD +
Sbjct: 461 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+L++ E V +A+++L K D +YN + N + ++ K +
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580
Query: 584 LGFAPNNLTCKYMIHSLWK 602
+G P+ T +I+ K
Sbjct: 581 MGVTPDVHTYTILINGFCK 599
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 180/378 (47%), Gaps = 10/378 (2%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+ A+ + L KP Y I+ L S A + E+ VK V
Sbjct: 426 GDTRGAIKLLRKIDGRLT-KPNVEMYSTIIDALCKYQLVSEAYGLFSEMT--VKGISADV 482
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ LI + + VG ++E+ + + P + + L++ L K + +
Sbjct: 483 VTYSTLI-------YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKE 535
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
V M + + P+ T+N L + + +V K + G PD+ TY LI+
Sbjct: 536 AKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN 595
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+CK +++A L++ M+++N++PD VTY++L++GLCK G++ L M RG
Sbjct: 596 GFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPA 655
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D+++YN+LI CK G + ++ +L +M GI P+TFT I++ G K GRL A +
Sbjct: 656 DVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 715
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+L G + IY+ +I C+ A ++L ++ ++G +P+ ++ ++ +L K
Sbjct: 716 QDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKK 775
Query: 464 DSVADALLLKDEMVDRNI 481
D A L +M+ R +
Sbjct: 776 DENDKAEKLLRQMIARGL 793
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 157/339 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K L+ E++ F + G +V+ + L+ G + + + + EM I P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL K G V + L + + PD+ TYNTL++ Y + A +++
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M V PD+ TYT L+NG CK V EA LF M + + PD V+Y++L+ CK
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ L+ EM G D T ++ G K G L A+ L +++ G+ + +
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+ R A + + + GY + IYN ++ CK + +AL + +M +
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ T+ +I + +A L+ +M+ G+L
Sbjct: 756 NGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 178/370 (48%), Gaps = 1/370 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ + FRK +D+GF+P++++ L++GL K I Q +++ EEM R G PN +T
Sbjct: 289 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 348
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G +K FL+ + + + P++ TY ++I YCK+ +LN A L+ M
Sbjct: 349 TALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 408
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P++ TYTTL+NG CK G A++L + M G P+I +YN +I + CK+ +
Sbjct: 409 EQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAP 468
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL + G+ D T I++Q K+ + AL + + G + + LI
Sbjct: 469 EAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILI 528
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A C+ + + L + + G VP+ E Y ++ CK AL M
Sbjct: 529 AAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCV 588
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY +LI C EA L + M++ G+ P L YC D A +
Sbjct: 589 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIV 648
Query: 543 LGFFAKKFQI 552
L KK I
Sbjct: 649 LEPLDKKLWI 658
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 211/424 (49%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ ++G + E+ + G PS ++ N +L ++ ID V++EM G+CP+
Sbjct: 180 FSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPD 239
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ +F ++ ++G + + + +L + + GF PD T ++S+ C+ G +N A + +R
Sbjct: 240 SSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFR 299
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M P+L+ +T+L++GLCK+G +++A ++ MV G P++ ++ LI CK G
Sbjct: 300 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 359
Query: 360 KMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ L +++ + IY P+ T ++ GY KE +L A L ++ G+ + + Y
Sbjct: 360 WTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 419
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L+ + +G+ P++ YN +++SLCK +A L ++
Sbjct: 420 TTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFS 479
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ TY LI C +A++ M ++G D ++ +LI +C +K + +
Sbjct: 480 CGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 539
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+E L + E+Y ++ + + ++GD ++ R G P++ T +I
Sbjct: 540 SERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLIS 599
Query: 599 SLWK 602
L K
Sbjct: 600 GLCK 603
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 188/414 (45%), Gaps = 19/414 (4%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
DL KP N+ ++ L A +ML E+V +V LI
Sbjct: 303 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR--NGWKPNVYTHTALID------- 353
Query: 179 AYVKVGLIRESFKTFRKTL--DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
K G ++F+ F K + D+ ++P++ + ++ G K + +++ ++ M G+
Sbjct: 354 GLCKRGWTEKAFRLFLKLVRSDI-YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 412
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN +T+ L + CK G+ D+ + +++EGF P++ TYN +I S CKK R +A+
Sbjct: 413 FPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYE 472
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L + + D VTYT L+ CK+ +++A F RM G D+ N LI A+C
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
++ KM+ES+ L ++ G+ P T ++ GY KEG AL ++R G
Sbjct: 533 RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI LC+ + A L E + G P L CK + A A+++ + +
Sbjct: 593 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPL 652
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ K + T R L+ C + G A ++LE DS RV + +
Sbjct: 653 ---DKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEK----DSSADRVTLAAF 699
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 182/396 (45%), Gaps = 22/396 (5%)
Query: 51 FLPETQNPNKIVDLIC--SSLKKGDSHLT-LLQNDLKP-LLPHLGAHEISRVLLRCQSDS 106
F P N ++D +C S+K+ L +++N KP + H I + R ++
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL--IDGLCKRGWTEK 363
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
L F V++D+ KP Y ++ +K + A + + E + +V+ +
Sbjct: 364 AFRL-FLKLVRSDI-YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE--QGLFPNVNTY 419
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI+ + K G +++ D GF+P+I + N +++ L K + + ++
Sbjct: 420 TTLIN-------GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYE 472
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ + G+ + T+ IL CK D+ + F ++ + GF+ D+ N LI+++C
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
++ ++ ++ L++++ ++P TYT++++G CKEG A + FH M G PD
Sbjct: 533 RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSF 592
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y +LI CK+ + E+ L M+ G+ P T + Y K SA+ ++ L
Sbjct: 593 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLEPL 652
Query: 407 -QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ + R L+ LC + + A +++
Sbjct: 653 DKKLWIRTVRT----LVRKLCSEKKVGVAALFFQKL 684
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 71/152 (46%)
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
E+ ++ + + + +A+ + +M ++ + PS T ++ G A ++ DE
Sbjct: 171 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDE 230
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M G+ PDS ++++ G + + +A+ L ++ I D + + + E+G
Sbjct: 231 MSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGL 290
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++ + ++ + LGF PN + +I L K
Sbjct: 291 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 322
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 190/379 (50%), Gaps = 12/379 (3%)
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL-----IRESFKTFRKTLDVG 200
+ M+ E EL+KD VF+ + + + + GL + + + F + G
Sbjct: 306 ISMVQEATELLKDA-----VFKGFVP--DQVTYCSLINGLCAEGDVERALELFNEAQAKG 358
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P IV N L+ GL I QV EM G P+ T+NI+ + CK G++
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ +G+ PD+ T+NTLI YCK+ +L+ A L M+ + PD +TY +++NGL
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK GKV E ++ F M+ +G P+ ++YN LI +C+ KM+E+ ++ +M G++PD
Sbjct: 479 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 538
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
+ ++ G+ + G L A L +L+ G S + D ++ LI A A + +
Sbjct: 539 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 598
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G+ Y L++ CK +V A + EM+ + PS+ST+ +I R
Sbjct: 599 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 658
Query: 501 SGEAVSLMDEMLESGMLPD 519
+AV ++ M++ G++P+
Sbjct: 659 VFQAVGIIHIMVKIGVVPE 677
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 1/389 (0%)
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GL Q++++M + PN FN + H CK GDV + L K+ + G
Sbjct: 163 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 222
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+L TYN I C+ GRL +A L M R +PD+VTY TL+ GLCK+ +EA
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYL 281
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
RM+++G PD +YNT+I YCK +QE+ LL + + G PD T ++ G E
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + AL L E Q G+ +Y+ L+ LC A ++ + ++G P ++ Y
Sbjct: 342 GDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 401
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK +++DA ++ ++ + + P + T+ LI +C + A+ L++ M E
Sbjct: 402 NIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE 461
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD+ ++NG C VN+ K + +YN + F + +
Sbjct: 462 YGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEE 521
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + + G P+ ++ +I+ +
Sbjct: 522 ASKVIVKMSQEGLHPDAVSFNTLIYGFCR 550
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 193/407 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + +E+ R+ ++ G P + N +++G K++ + + ++ ++ G P+
Sbjct: 270 KKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQV 329
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + C GDV++ + + +G PD+V YN+L+ C +G + A + M
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TY ++NGLCK G + +A + + + +G PD+ ++NTLI YCK K+
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 449
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ M GI PDT T ++ G K G++ E+ G + Y+ L
Sbjct: 450 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 509
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ N+ A+ ++ ++ Q+G P +N L+ C+ + A LL ++ ++
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ T+ LI F G A + DEML G DS RVLI+G C +V++A
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 629
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
L KK I ++ V N + + + + + +++G P
Sbjct: 630 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 194/425 (45%), Gaps = 5/425 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + G +R++ F + P+ + N +++ L+ DQ +VY M G+ P
Sbjct: 62 AYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSP 121
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT I FC L + G V Y T++ G +DA L+
Sbjct: 122 DLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLF 177
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +V P+L + +++ LCK G V EA L +++ RG+S ++ +YN I C+
Sbjct: 178 DQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEA 237
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E+ L+ M + PD T +++G K+ A++ + + G Y
Sbjct: 238 GRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 296
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ + AT LL+ G+VP Y L+ LC V AL L +E
Sbjct: 297 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 356
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ IKP + Y +L+ C G A+ +M+EM E G PD Q ++ING C +++
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 416
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ K + D ++N + + + + L ++L +R G AP+ +T +++
Sbjct: 417 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476
Query: 599 SLWKG 603
L K
Sbjct: 477 GLCKA 481
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 182/370 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+ +++E+ + + + GF P V+ L+NGL +++ +++ E GI P
Sbjct: 302 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 361
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L C G + + ++ EEG PD+ TYN +I+ CK G ++DA +
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LPD+ T+ TL++G CK K+ A QL RM G++PD ++YN+++ CK
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+ E EM+ G +P+ T I+++ + + ++ A ++V++ + G+ +
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C++ A L +++ + GY + + +N L+ + ++ A + DEM+
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + TYR LI C A + EM++ G +P +IN + V +
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661
Query: 539 AEALLGFFAK 548
A ++ K
Sbjct: 662 AVGIIHIMVK 671
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 191/393 (48%), Gaps = 21/393 (5%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
+ D AL FN + IKP Y +V L A++++ E+ E + C
Sbjct: 340 AEGDVERALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE--EGCHP 396
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + +I+ K+G I ++ + G+ P + + N L++G K +
Sbjct: 397 DIQTYNIVIN-------GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 449
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D Q+ E M GI P+T T+N + + CK G V++VN +++ +G P+ +TYN L
Sbjct: 450 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 509
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I ++C+ ++ +A + M + + PD V++ TL+ G C+ G + A+ LF ++ +G
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
S ++NTLI A+ + M ++ + EM+ G D++T ++++ G K + A
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 629
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+VE+ + G S + +I +L ++R F A ++ + + G VP E+++++
Sbjct: 630 HLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP------EVVDTIL 683
Query: 462 KCDS---VADALLLKDEMVDRNIKPSLSTYRAL 491
D A +L++D M +I S TY L
Sbjct: 684 NADKKEIAAPKILVEDLMKKGHI--SYPTYEVL 714
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 197/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N D + E M + I + +++NIL + FC+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG PD+ +Y T++ CK G + + SLL +M I D
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ + ALNL E+ G+ + Y+ LI LC R A+ LL +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ ++ L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LI G+C K V + L +++ + +T +YN +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD ++ K+ + G P+ +T ++ L K
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 211/453 (46%), Gaps = 35/453 (7%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ + + +QP+ V+ N L++GL N + + + M G P+ T+
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 246 LTHVFCKNGDVDKVNGFLEKIEE-----------------------------------EG 270
+ + CK GD+D L+K+E+ +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++VTYN+LI C GR +DA L M R + P++VT++ L++ KEGK+ EA
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+ T +++G+
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K R+ + L E+ + G+ + Y+ LI L Q A + +++ DG P +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L++ LCK + AL++ + + ++P + TY +I C G+ + L
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+ G+ P+ I +I+G+C + +A+AL + + ++ +YN + DGD
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ EL K GF + T +I+ L G
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 10/454 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+E +P + + ++H L +NK S A+ ++ +V + C + + +++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV--ARGCQPDLFTYGTVVN-------G 229
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K G I + +K + +V +++ L ++ ++ EM GI PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L C G + L + E +P++VT++ LI ++ K+G+L +A LY
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +R++ PD+ TY++L+NG C ++ EA +F M+ + P++V+YNTLI +CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++E L EM G+ +T T ++QG + G A + ++ GV Y
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+ + A + E + + P + YN ++E +CK V D L + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+KP++ Y +I FC G EA +L EM E G LP+S LI + D +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
L+ + D + + V NM DG L K
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINML-HDGRLEK 622
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N LL L +D ++ EM + P+ FN L K D V E+++
Sbjct: 54 NVLLDLK-LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
DL +YN LI+ +C++ +L A + M + PD+VT ++L+NG C ++ EA L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M P+ V++NTLI K E+ +L+ M+ G PD FT +V G K
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + AL+L+ ++++ + IY +I ALC A +L + G P++
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LC +DA L +M++R I P++ T+ ALI F G+ EA L DEM+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + PD LING+CM +++A+ + K + +YN + F + +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ MEL + + G N +T +I L++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 164/339 (48%), Gaps = 10/339 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + N I+P Y ++ L ++S A ++L +++E + +V F
Sbjct: 274 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSA 330
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A+VK G + E+ K + + + P I + + L+NG + +D+ ++
Sbjct: 331 LID-------AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M PN T+N L FCK V++ ++ + G + VTYNTLI +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + A +++ M V PD++TY+ L++GLCK GK+ +A +F + + PDI +Y
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I CK GK+++ L + G+ P+ ++ G+ ++G A L E++
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G + Y+ LI A +D A+ L++ + G+V
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F +P I + N ++ G+ K ++ W ++ + G+ PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + FC+ G ++ + +++E+G P+ TYNTLI + + G + L + M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D T + ++N L +G++ +++
Sbjct: 597 RSCGFVGDASTISMVINML-HDGRLEKSY 624
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 215/436 (49%), Gaps = 11/436 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
ALTF + + ++ + P S+ + ++ +L +N F A + EL V +D +
Sbjct: 108 ALTFLHHMIHEGHV-PLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKV-----VLDAYSF 161
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
I C Y G F+ + G P++V L++G K + ++
Sbjct: 162 GIMIKGCCEAGYFVKG-----FRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLF 216
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M R+G+ PN HT+++L + F K G + E ++ G P+ YN LIS YC
Sbjct: 217 CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNG 276
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF ++ M + + ++TY L+ GLC+ K EA +L H++ GLSP+IV+Y
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI +C GKM + L ++ +G+ P T ++ GY K L AL+LV E++
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ S+ Y LI A + N A + + + G VP + Y+ L+ LC ++ +
Sbjct: 397 RCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKE 456
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L + + +++P+ Y +I +C G S A+ L++EM+ SGM+P+ I
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIG 516
Query: 529 GYCMEKDVNKAEALLG 544
C ++ +AE LLG
Sbjct: 517 LLCRDEKWKEAELLLG 532
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 196/411 (47%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV ++ + G P + N L+ L++ N D+ W ++ E+ + +
Sbjct: 98 AYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL-KSKVVL 156
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++F I+ C+ G K L +EE G P++V Y TLI CK G + A L+
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLF 216
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R ++P+ TY+ LMNG K+G RE Q++ M G+ P+ +YN LI YC
Sbjct: 217 CKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNG 276
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ + EM GI T I++ G + + A+ LV ++ + G+S + Y
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C + A L ++ G P+L YN L+ K +++A AL L EM +
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I PS TY LI F + + +A + M +SG++PD VLI+G C+ ++ +
Sbjct: 397 RCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKE 456
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L + ++ YN + + + ++G + + L + G PN
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 171/345 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + F K +G P+ + + L+NG K + +Q+YE M R GI PN +
Sbjct: 205 KYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L +C G VDK ++ E+G ++TYN LI C+ + +A L +
Sbjct: 265 AYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P++VTY L+NG C GK+ A +LF+++ GLSP +V+YNTLI Y K +
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ EM I P T I++ + + A + +++ G+ Y L
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVL 444
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC A+ L + +G+ P+ IYN ++ CK S AL L +EMV +
Sbjct: 445 IHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGM 504
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P+++++ + I C + EA L+ +M+ SG+ P + +++
Sbjct: 505 VPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 156/330 (47%), Gaps = 10/330 (3%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
PH+ V + + K GL RE F+ + G P+ + N L++
Sbjct: 228 PHTYSVLMN----------GFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGG 277
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+D+ ++V+ EM GI T+NIL C+ + + K+ + G P++VTYN
Sbjct: 278 MVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYN 337
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
LI+ +C G+++ A L+ + + P LVTY TL+ G K + A L M R
Sbjct: 338 ILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 397
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
++P V+Y LI A+ + +++ + M +G+ PD +T +++ G G + A
Sbjct: 398 CIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEA 457
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L L + + IY+ +I C++ + A LL + G VP++ + +
Sbjct: 458 SKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGL 517
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
LC+ + +A LL +M++ +KPS+S Y+
Sbjct: 518 LCRDEKWKEAELLLGQMINSGLKPSVSLYK 547
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 1/285 (0%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y T++N +A H M+H G P ++N L+ + ++ + E+
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ D ++ I+++G + G + L+ L+ FG+S + IY LI C+
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A +L ++ + G VP+ Y+ LM K + + + M I P+ Y LI
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+C G +A + EM E G+ +LI G C K +A L+ K
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +YN + N F + G + + L + G +P +T +I
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLI 375
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 116/269 (43%), Gaps = 17/269 (6%)
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL---LYEMMGNGIYPD--TF 381
EA L +MV + ++ +NT + +G S S+ L ++ +G+ P +
Sbjct: 5 HEALILIQKMVKVPPTKALLLFNTATY----QGLQHTSHSISFILNHLLSSGMLPQAQSL 60
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS-RDIYDYLIVALCQDNRPFAATSLLER 440
++I GR+ S+L L + F ++ +YD ++ A + A + L
Sbjct: 61 ILRLI------SGRIPSSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHH 114
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ +G+VP +N LM L + + A + +E+ + + + S + +I C G
Sbjct: 115 MIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYS-FGIMIKGCCEAGY 173
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+ L+ + E G+ P+ I LI+G C +V A+ L + + + +Y+
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSV 233
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ N F + G + ++ + R G PN
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPN 262
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 204/462 (44%), Gaps = 38/462 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY K + ++ F++ ++ G QP I S N LLN L++ N D+ + +G+
Sbjct: 62 AYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLS 121
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+NIL + C+ DK L + +GF PD+ +Y TLI+S K G ++DA L
Sbjct: 122 PNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKL 181
Query: 298 YRIMYRRNVLPDLV------------------------------------TYTTLMNGLC 321
+ M R V PD+ +Y ++NGLC
Sbjct: 182 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 241
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K GK E+ +++HRM D+ +Y+TLI C G + + + EM NG+ PD
Sbjct: 242 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 301
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ GY + GR+ L L +++ G Y+ LI L ++ + A S+ E +
Sbjct: 302 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISIWELL 360
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ Y L+ LCK + AL + +E + Y ++I C GR
Sbjct: 361 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 420
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
E ++D+M + G P+ +C +ING+ + A G K +YN +
Sbjct: 421 DEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTL 480
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N ++ S+ L K L+ G+ PN +T +++ L +G
Sbjct: 481 INGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/548 (23%), Positives = 251/548 (45%), Gaps = 18/548 (3%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV-SALT 111
P ++ N +++ + S K ++ L + L P+L + I + + C+ A
Sbjct: 87 PGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI-LIKISCRKKQFDKAKE 145
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
NW+ P +Y +++ LA N S A+K+ E+ E + V + LI
Sbjct: 146 LLNWMWGQ-GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPE--RGVTPDVACYNILID 202
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
+ K G I + + + + L P+I S N ++NGL K D+ ++++
Sbjct: 203 -------GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 255
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M + + +T++ L H C +G++D +++ E G PD+V YNT+++ Y + GR
Sbjct: 256 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 315
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+ + L+++M + +V+Y L+ GL + KV EA ++ + + D ++Y
Sbjct: 316 IEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGV 374
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L+ CK G + ++ S+L E DTF ++ G +EGRL ++ ++ + G
Sbjct: 375 LVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHG 434
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + + +I + ++ A + G P++ YN L+ L K + ++A
Sbjct: 435 CKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAY 494
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM+ + KP++ TY L+ C + A++L + LE G PD ++ ++I+G
Sbjct: 495 ALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGL 554
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN- 589
C V A L ++ + + ++N + F + D + ++ L+ G P+
Sbjct: 555 CSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDI 614
Query: 590 ---NLTCK 594
N+T K
Sbjct: 615 ISYNITLK 622
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 191/402 (47%), Gaps = 10/402 (2%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y ++H L + A ++ E+ E V V+ +++ Y++ G I E
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAE--NGVSPDVVVYNTMLN-------GYLRAGRIEE 318
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ ++ G + ++VS N L+ GL + +D+ ++E + C ++ T+ +L H
Sbjct: 319 CLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 377
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CKNG ++K LE+ E D D Y+++I+ C++GRL++ + M + P
Sbjct: 378 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 437
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ ++NG + K+ +A + F MV +G P +V+YNTLI K + E+ +L+
Sbjct: 438 NPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 497
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+ G P+ T +++ G + +L ALNL + G +++ +I LC
Sbjct: 498 KEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 557
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A L + Q VP+L +N LME K A + D ++ ++P + +Y
Sbjct: 558 GKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISY 617
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ C R +AV +++ ++ G+LP + +L+ GY
Sbjct: 618 NITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGY 659
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 92/187 (49%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E++ ++ L G++P++++ + L+NGL + +D ++ + G P+ NI+
Sbjct: 492 EAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 551
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C +G V+ ++++ P+LVT+NTL+ + K A ++ + + +
Sbjct: 552 HGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQ 611
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+++Y + GLC ++ +A + V RG+ P +++N L+ Y E +
Sbjct: 612 PDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFV 671
Query: 368 LYEMMGN 374
M GN
Sbjct: 672 PASMKGN 678
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 196/414 (47%), Gaps = 4/414 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I E+ + F + +D QP + L+ GL K ++ + M +G P
Sbjct: 90 GFCETGRIDEAVELFGE-MD---QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRP 145
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T + + C + L+++ E+G P +VT +I++YCK+GR++DA +
Sbjct: 146 STRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL 205
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R P++ TY L+ G C EGKV +A L ++M G++PD V+YN LI C +
Sbjct: 206 ELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCID 265
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + LL M G+G+ D +T ++ K+GR A +L L+ G+ + +
Sbjct: 266 GHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTF 325
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI LC+ + A LE++ G P Y+ +E LCK + L EM+
Sbjct: 326 NSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQ 385
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KPS Y +I G EM+ SG PD + YC+E +N+
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L +K DT +YN + + A G + + K+ + PN T
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFT 499
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 170/378 (44%), Gaps = 6/378 (1%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R G P+ +TFN L +C+ VD +K+ GF D+V+Y LI +C+ GR
Sbjct: 37 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+++A L+ M + PD+ Y L+ GLCK G+ E + RM G P +Y
Sbjct: 97 IDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAA 152
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
++ C E K +E++ +L EM G+ P TC ++ Y KEGR+ AL ++ ++ G
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ Y+ L+ C + + A +LL ++ G P YN L+ C + A
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAF 272
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L M + TY ALI C GR+ +A SL D + G+ P++ LING
Sbjct: 273 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A L DT +Y++ + + + L+ P+
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 392
Query: 591 LTCKYMIHSLWKGMERKF 608
+ +IH L K ER +
Sbjct: 393 VNYTIVIHKLLK--ERNY 408
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 228/537 (42%), Gaps = 63/537 (11%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDLISCTEDCN 177
+L +P++ Y +V W K A +ML E+ E + C +++CT N
Sbjct: 140 ELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPC---------VVTCTAVIN 190
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY K G + ++ + G +P++ + N L+ G + + + +M G+
Sbjct: 191 -AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+N+L C +G ++ L +E +G D TYN LI++ CK GR + A L
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + R + P+ VT+ +L+NGLCK GKV A + +MV G +PD +Y++ I CK
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCK 369
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIV------------------------------ 387
QE S + EM+ + P T I++
Sbjct: 370 MKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT 429
Query: 388 -----QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+ Y EGRL A N+++E+ + GV++ Y+ L+ + A S+L+++
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK-----------------PSL 485
VP+ Y L+ L + V D L L V + I+ P+
Sbjct: 490 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 549
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +++ F GR+ EA SL+ M E + + I L+ +C K A L+
Sbjct: 550 GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCS 609
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ I SY + + +G K E+ ++P+ + K +I L K
Sbjct: 610 MIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 666
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 158/326 (48%), Gaps = 4/326 (1%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYN +I S C++ L A +M R PD T+ +L+ G C+ +V A LF +M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
RG + D+VSY LI +C+ G++ E+ L EM PD +V+G K GR
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L ++ ++ G S Y ++ C + + A +L+ + + G P + +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ + CK ++DAL + + M R KP++ TY AL+ FC G+ +A++L+++M G+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD+ +LI G C++ + A LL I D +YNA+ N +DG +
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
L G PN +T +I+ L K
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCK 334
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 6/267 (2%)
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
HR H +P +YN +I + C+ + + L M+ +G PD +T ++ GY +
Sbjct: 1 MHR--HAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCR 58
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
++ A +L ++ G + Y LI C+ R A L + Q P + +
Sbjct: 59 TNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHM 114
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y L++ LCK + LL+ M + +PS Y A++ C ++ EA ++ EM
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G+ P C +IN YC E ++ A +L + + +YNA+ F +G +
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHS 599
K M L + G P+ +T +I
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRG 261
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 129/318 (40%), Gaps = 26/318 (8%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++KP++ NY +++H L + + E+V S D+++ T AY
Sbjct: 387 DVKPSTVNYTIVIHKLLKERNYGLVARTWGEMV--------SSGCNPDVVTYTTSMR-AY 437
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G + E+ + G ++ N L++G + D + ++M + PN
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497
Query: 241 HTFNILTHVFC-----------------KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
T+ IL K ++ V G + +++ F P+ TY++++
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ + GR +A L +M ++ + YT L+ CK + +A L M+ G P
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 617
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
++SY L+ EG+ ++K + PD ++I+ G K+G + ++
Sbjct: 618 HLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMI 677
Query: 404 VELQRFGVSISRDIYDYL 421
+ L+R S Y L
Sbjct: 678 IMLERMNCRPSHQTYAML 695
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 193/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN----- 177
+ T +YC ++H L + A K L ++V K + VF ++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G LN
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +++ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M+ +GL PD +Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYKPSV 416
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R L DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L + G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 591 LTCKYMI 597
T +I
Sbjct: 312 FTYTTLI 318
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 188/394 (47%), Gaps = 3/394 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS S N LL GL+ +D + + R + P+ +TFN + C+ G + K
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY---LYRIMYRRNVLPDLVTYTTLMN 318
+ I+ G P + TYN+LI YCKKG + ++ L + M + P VT+ L+N
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK A ++F M +G++ +V+YN+LI C EGK++E L+ EM G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T +++G+ K+G + A + + + V IY+ LI + + A ++
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G P++ YN L+ + A L DEM ++ I+ + TY LI C
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G +AV L+DEM E G+ P+ +I G+C + ++ A + K + + +Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N F + G + + +L L PN +T
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 4/356 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV---YEEMGRIGICP 238
++G +R++ + G PS+ + N L++G K + V +EM GI P
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
TF +L + +CKN + E+++++G +VTYN+LIS C +G++ + L
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ +T+ ++ G CK+G + +A+ M R + PD+V YN LI Y +
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM+++ ++ M GI P+ T ++ G+ + G SA L+ E++ G+ Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI ALC A LL+ + + G P+ YN +++ C ++ A ++ M
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ ++ TY I FC IG+ EA L++EML+ ++P+ + G MEK
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-MEK 557
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 3/330 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P + N L++ R++ A +R RR V PD+ T+ T+++GLC+ G++R+A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEG---KMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ GL+P + +YN+LI YCK+G M LL EM+ GI P T +++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K +A+ + E+++ G++ S Y+ LI LC + + L+E + G P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ +++ CK +ADA D M +RN++P + Y LI + +G+ +A+++ +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M + G+ P+ LI G+ D A LL +K D +YN + G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ K ++L +G PN+LT +I
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G++ ++ + +P +V N L++ +L ++ V E M + GI P
Sbjct: 343 GFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L F ++GD +G L++++E+G + D+VTYN LI + C KG + A L
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ +TY T++ G C +G ++ A+++ RM ++V+YN I +C+
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
GKM E+ LL EM+ + P+ T + I +G ++G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ K + +VG +P+ ++ N ++ G I +++ M + N T+
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
N+ FC+ G +D+ N L ++ ++ P+ +TY T+ +KG D
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 189/400 (47%), Gaps = 6/400 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +L L + ++ +M R PN T+N + FC G V + ++ E
Sbjct: 45 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 100
Query: 269 EG-FDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G P+ TY T+IS +CK GR+++A ++ ++ + V P+ V Y L+ G C +GK+
Sbjct: 101 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 160
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A RMV RG++ + +YN L+ A +G+ E+ L+ EM G G+ PD FT I+
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 220
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL + + R GV + Y LI AL + + L + + G
Sbjct: 221 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 280
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L +YN L+ S ++ A + EM + I P TY L+ C +GR EA
Sbjct: 281 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 340
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+DEM + G+ PD LI+GY M+ DV A + K +YNA+
Sbjct: 341 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 400
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
++G + K + G P++ T +I L ER
Sbjct: 401 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 440
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 176/337 (52%), Gaps = 1/337 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDK 258
G P+ + +++G K+ +D+ +V++EM G + P +N L +C G +D
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ +++ E G + TYN L+ + GR +A+ L M + + PD+ TY L+N
Sbjct: 163 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILIN 222
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CKEG V++A ++F M RG+ +V+Y +LI+A K+G++QE+ L E + GI P
Sbjct: 223 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 282
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++ + G + A ++ E+++ ++ Y+ L+ LC R A L+
Sbjct: 283 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 342
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P L YN L+ V DAL +++EM+++ P+L TY ALI C
Sbjct: 343 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 402
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G+ +A +++ EM+E+G+ PD LI G E +
Sbjct: 403 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 9/321 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + E+KP + Y ++ K A+ +VE + +V +
Sbjct: 127 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNL 184
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ A G E+++ + G P + + N L+NG K + + +++
Sbjct: 185 LV-------HALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIF 237
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M R G+ T+ L + K G V + + ++ G PDLV YN LI+S+
Sbjct: 238 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF + M ++ + PD VTY TLM GLC G+V EA +L M RG+ PD+V+Y
Sbjct: 298 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 357
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NTLI Y +G ++++ + EMM G P T ++QG K G+ A N+V E+
Sbjct: 358 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 417
Query: 409 FGVSISRDIYDYLIVALCQDN 429
G++ Y LI L ++
Sbjct: 418 NGITPDDSTYISLIEGLTTED 438
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 171/360 (47%), Gaps = 8/360 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL ++ I P Y ++ + A+K+ E++ + P +V ++
Sbjct: 90 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV-MYN 148
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI Y G + + + ++ G ++ + N L++ L + +++
Sbjct: 149 ALIG-------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 201
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEMG G+ P+ T+NIL + CK G+V K E + G +VTY +LI + K
Sbjct: 202 VEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 261
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
KG++ + L+ RR + PDLV Y L+N G + A ++ M + ++PD V+
Sbjct: 262 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 321
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTL+ C G++ E++ L+ EM GI PD T ++ GY +G + AL + E+
Sbjct: 322 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 381
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + + Y+ LI LC++ + A ++++ + ++G P Y L+E L D A
Sbjct: 382 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 441
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 6/324 (1%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T+N ++ C G+ A L R M R P+ VTY T++ G C G+V+ A +
Sbjct: 42 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 97
Query: 336 MVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKE 393
M R G++P+ +Y T+I +CK G++ E+ + EM+ G + P+ ++ GY +
Sbjct: 98 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+L +AL + GV+++ Y+ L+ AL D R A L+E +G G P + Y
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ CK +V AL + + M R ++ ++ TY +LI G+ E L DE +
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD + LIN + ++++A ++G KK D +YN + G + +
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+L + G P+ +T +I
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLI 361
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N ++ LC A AL L +M +P+ TY +I FC GR A+ +M EM
Sbjct: 44 FNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99
Query: 513 E-SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGD 570
E G+ P+ +I+G+C V++A + K ++ + YNA+ + + G
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + + R + G A T ++H+L+
Sbjct: 160 LDTALLYRDRMVERGVAMTVATYNLLVHALF 190
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 189/380 (49%), Gaps = 18/380 (4%)
Query: 148 MLCELVELVKDC------PHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDV 199
ML E EL+KD P V + LI+ C E G + + + F +
Sbjct: 234 MLQEATELLKDAIFKGFVPDRV-TYCSLINGLCAE---------GDVERALELFNEAQAK 283
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
+P +V N L+ GL + I QV EM G P+ T+NI+ + CK G++
Sbjct: 284 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDA 343
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +G+ PD+ T+NT+I YCK+ +L+ A L M+ + PD +TY +++NG
Sbjct: 344 AVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNG 403
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK GK +E ++ F M+ +G P+ ++YN LI +CK +++E+ ++ M +G+ PD
Sbjct: 404 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPD 463
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T + ++ G+ + G L A L +L G S + D ++ LI A A +
Sbjct: 464 TISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 523
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ GY P L Y L++ CK +V A + EMV + PS++T+ ++
Sbjct: 524 EMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNH 583
Query: 500 RSGEAVSLMDEMLESGMLPD 519
R EAV+++ M+ G++P+
Sbjct: 584 RVSEAVAIIHIMVRMGVVPE 603
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 190/437 (43%), Gaps = 34/437 (7%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+ + N +++ L+ DQ +VY M G+ P+ T + FC G
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + E G D + Y T++ G DA +L+ M RR+V PD+ T+ +++
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 320 LCKEGKVREAHQLFHRMVHRGLS----------------------------------PDI 345
LC++G + E+ L +++ RG+S PD+
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+YNTL+ CK+ K+QE+ L MM G PD FT I+ GY K L A L+ +
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
G R Y LI LC + A L P L +YN L++ LC+
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ AL + +EMV+ P + TY +I C +G +A +M++ + G LPD
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+I+GYC ++ A L+ D +YN+V N + G ++ E + + G
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424
Query: 586 FAPNNLTCKYMIHSLWK 602
PN +T +I + K
Sbjct: 425 CRPNAITYNILIENFCK 441
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 198/436 (45%), Gaps = 35/436 (8%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E +++D P +V+ N L+ GL K + + + Q M G P+ T+N +
Sbjct: 167 EEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTII 226
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+CK + + L+ +GF PD VTY +LI+ C +G + A L+ +++
Sbjct: 227 DGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLK 286
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PDLV Y +L+ GLC++G + A Q+ + MV G PDI +YN +I CK G + ++ +
Sbjct: 287 PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVV 346
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ + + G PD FT ++ GY K +L SAL LV + +G++ Y+ ++ LC+
Sbjct: 347 MNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCK 406
Query: 428 DN-----------------RPFA------------------ATSLLERIGQDGYVPSLEI 452
RP A A+ ++ R+ QDG VP
Sbjct: 407 AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTIS 466
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+ C+ + A LL ++ ++ + T+ LI + A + EM+
Sbjct: 467 FNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMI 526
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G PD RVL++G C +V++A L K + ++ V N A + +S
Sbjct: 527 SKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVS 586
Query: 573 KLMELQKRFLRLGFAP 588
+ + + +R+G P
Sbjct: 587 EAVAIIHIMVRMGVVP 602
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 181/370 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K +++E+ + + + GF P V+ L+NGL +++ +++ E + P
Sbjct: 228 GYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKP 287
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +N L C+ G + + ++ E+G PD+ TYN +I+ CK G ++DA +
Sbjct: 288 DLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVM 347
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LPD+ T+ T+++G CK K+ A QL RM G++PD ++YN+++ CK
Sbjct: 348 NDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKA 407
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK +E EM+ G P+ T I+++ + K +L A ++V + + G+ +
Sbjct: 408 GKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISF 467
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C++ A L +++ + GY + + +N L+ + ++ A + EM+
Sbjct: 468 NTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMIS 527
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ KP L TYR L+ C A + EM+ G +P ++N M V++
Sbjct: 528 KGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSE 587
Query: 539 AEALLGFFAK 548
A A++ +
Sbjct: 588 AVAIIHIMVR 597
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 188/414 (45%), Gaps = 40/414 (9%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M G P +N + D+ + ++ G PD T+ I S+C GR
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+ A L R + R + Y T++ GL G +A LF M+ R + PD+ ++N
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
++ A C++G + ES +LL +++ G+ + FTC I ++G + GRL A+ LV + +
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179
Query: 411 VSISRDI--YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
I+ D+ Y+ L+ LC+D++ A L R+ G +P YN +++ CK D + +
Sbjct: 180 --IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQE 237
Query: 469 AL-LLKD----------------------------------EMVDRNIKPSLSTYRALIC 493
A LLKD E +++KP L Y +L+
Sbjct: 238 ATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVK 297
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C G A+ +M+EM+E G PD ++ING C +++ A ++ K +
Sbjct: 298 GLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLP 357
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
D ++N + + + + L ++L +R G AP+ +T +++ L K + K
Sbjct: 358 DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 190/389 (48%), Gaps = 15/389 (3%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+ D AL FN + ++KP Y +V L A++++ E+VE C
Sbjct: 267 EGDVERALELFNEAQAK-DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE--DGCHPD 323
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+ + +I+ K+G I ++ + G+ P + + N +++G K +D
Sbjct: 324 IWTYNIVIN-------GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLD 376
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
Q+ E M GI P+ T+N + + CK G +VN E++ +G P+ +TYN LI
Sbjct: 377 SALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILI 436
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
++CK +L +A + M + ++PD +++ TL++G C+ G + A+ LF ++ +G S
Sbjct: 437 ENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYS 496
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
++N LI AY + MQ ++ + EM+ G PD +T +++V G K + A
Sbjct: 497 ATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVH 556
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E+ G S + ++ +L ++R A +++ + + G VP E+ + ++ S K
Sbjct: 557 LAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP--EVVDTIL-STDK 613
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRAL 491
+ A +L+++ M +I S TY L
Sbjct: 614 KEIAAPKILVEELMKKGHI--SYPTYEVL 640
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 188/394 (47%), Gaps = 3/394 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS S N LL GL+ +D + + R + P+ +TFN + C+ G + K
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY---LYRIMYRRNVLPDLVTYTTLMN 318
+ I+ G P + TYN+LI YCKKG + ++ L + M + P VT+ L+N
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK A ++F M +G++ +V+YN+LI C EGK++E L+ EM G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T +++G+ K+G + A + + + V IY+ LI + + A ++
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G P++ YN L+ + A L DEM ++ I+ + TY LI C
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G +AV L+DEM E G+ P+ +I G+C + ++ A + K + + +Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N F + G + + +L L PN +T
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 4/356 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV---YEEMGRIGICP 238
++G +R++ + G PS+ + N L++G K + V +EM GI P
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
TF +L + +CKN + E+++++G +VTYN+LIS C +G++ + L
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ +T+ ++ G CK+G + +A+ M R + PD+V YN LI Y +
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM+++ ++ M GI P+ T ++ G+ + G SA L+ E++ G+ Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI ALC A LL+ + + G P+ YN +++ C ++ A ++ M
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ ++ TY I FC IG+ EA L++EML+ ++P+ + G MEK
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-MEK 557
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 3/330 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P + N L++ R++ A +R RR V PD+ T+ T+++GLC+ G++R+A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEG---KMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ GL+P + +YN+LI YCK+G M LL EM+ GI P T +++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K +A+ + E+++ G++ S Y+ LI LC + + L+E + G P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ +++ CK +ADA D M +RN++P + Y LI + +G+ +A+++ +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M + G+ P+ LI G+ D A LL +K D +YN + G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ K ++L +G PN+LT +I
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G++ ++ + +P +V N L++ +L ++ V E M + GI P
Sbjct: 343 GFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISP 402
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L F ++GD +G L++++E+G + D+VTYN LI + C KG + A L
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ +TY T++ G C +G ++ A+++ RM ++V+YN I +C+
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
GKM E+ LL EM+ + P+ T + I +G ++G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ K + +VG +P+ ++ N ++ G I +++ M + N T+
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
N+ FC+ G +D+ N L ++ ++ P+ +TY T+ +KG D
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
>gi|359495078|ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
[Vitis vinifera]
Length = 1294
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 147/588 (25%), Positives = 268/588 (45%), Gaps = 26/588 (4%)
Query: 23 SFSSASSSYSLQIIQDSEHKSLS-----NPLYNFLPETQNPNKIVDLICSSLKK----GD 73
+ + ++ ++LQ K+L+ P F +N + I IC S +K G
Sbjct: 585 TLQNPTTHFNLQNWDPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGP 644
Query: 74 SHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIV 133
+ L N L+ + P L A +L+ Q+D V FF+W K ++Y
Sbjct: 645 PVVADL-NKLRRVTPVLVAE-----VLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFA 698
Query: 134 HILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTF 193
+ L +N+F A + EL+ + + P S F+ LI D N ++V + E K F
Sbjct: 699 YCLNRSNQFR-AADQVPELMNM-QGKPPSEKQFEILIRMHIDANRG-LRVYYVYEKMKKF 755
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
G +P + N +++GL+K +D VYE+ G+ + T+ IL CK
Sbjct: 756 ------GIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKA 809
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G +D+V E++ ++ +PD++ Y TL+++ C R+ + F L++ M ++ L D Y
Sbjct: 810 GRIDEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIY 869
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+L+ G +V A L ++ G D+ YN+LI C ++ ++ L +
Sbjct: 870 GSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVH 929
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
+ P+ T + ++ Y + R+ +L+ ++Q+ G + D+ + V + + R
Sbjct: 930 ESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGERLKL 989
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + E + GY S+ IYN LME++ + V AL L D++ D N KP STY I
Sbjct: 990 ALEVFEHLKAKGYC-SISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAII 1048
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
CF +G EA + ++++E LP R L+ G C ++++ A L+
Sbjct: 1049 CFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSG 1108
Query: 554 DTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
E Y + G+ K++++ ++ G P+ +T +I +
Sbjct: 1109 PMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGM 1156
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 160/405 (39%), Gaps = 34/405 (8%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G N ++N + ++ + E + +G P + LI + R
Sbjct: 686 GYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANRGLRV 745
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+Y+Y M + + P + Y +M+GL K G + A ++ GL + V+Y L+
Sbjct: 746 YYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKG 805
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK G++ E + EM + + PD +V R+ L E+++ I
Sbjct: 806 LCKAGRIDEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLID 865
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
R IY LI + R +A LL+ + GY L IYN L+E +C V A L
Sbjct: 866 RAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQ 925
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG--MLPD-SQICRVLI---- 527
V +++P+ T + ++ + + R + SL+ +M + G ++ D S+ V+I
Sbjct: 926 VTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGE 985
Query: 528 --------------NGYC--------MEK-----DVNKAEALLGFFAKKFQIYDTESYNA 560
GYC ME +V KA +L D+ +Y+
Sbjct: 986 RLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSN 1045
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
F E GD+ + + + + P+ + ++ L K E
Sbjct: 1046 AIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEE 1090
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 37/182 (20%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V+E + G C + +NIL + G+V K + I++ F PD TY+ I +
Sbjct: 992 EVFEHLKAKGYC-SISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICF 1050
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE---------------------- 323
+ G + +A Y + LP + Y +L+ GLCK
Sbjct: 1051 VEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPM 1110
Query: 324 --------------GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
G + + + M+ G +PD V+Y+ LI CK G ++E++ +
Sbjct: 1111 EFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFS 1170
Query: 370 EM 371
M
Sbjct: 1171 NM 1172
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICP 238
+V+VG ++E+ + K +++ PS+ + L+ GL K ID + + + + P
Sbjct: 1050 FVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGP 1109
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + CK+G+ +KV L ++ +EG PD VTY+ LIS CK G L +A ++
Sbjct: 1110 MEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVF 1169
Query: 299 RIMYRRNVL--PDLVTYTTLM 317
M R +L +++ Y ++
Sbjct: 1170 SNMRERKLLTEANVIVYDEIL 1190
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G ++++ F D F+P + + + +++ + + Y ++ + P
Sbjct: 1014 AIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLP 1073
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEK-IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + L CK+ ++D + + P Y I CK G +
Sbjct: 1074 SVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDV 1133
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAY 355
M + PD VTY+ L++G+CK G + EA ++F M R L +++ Y+ ++ +
Sbjct: 1134 LNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKLLTEANVIVYDEILIEH 1193
Query: 356 CKE 358
K+
Sbjct: 1194 MKK 1196
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 220/455 (48%), Gaps = 13/455 (2%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR D+ +L FF + +P S+YC IVHIL+ + L ELV L K+
Sbjct: 108 LRLNPDA--SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNN 165
Query: 160 PHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
+ V+ +L+S + +++ Y + G+ + + F G PS+ SCN
Sbjct: 166 YIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCN 225
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LL+ L++ + VYE+M +GI P+ ++ I+ + +CK G VD+ F++++E
Sbjct: 226 SLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS 285
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
+P++VTYN+LI Y G + A + +M + + + TYT L+ G CK G++ +A
Sbjct: 286 CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+LF M+ + L D Y LI AYC G++ ++ + M+ G+ +T C ++ G
Sbjct: 346 EKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K G + A ++V ++ + + Y+ L+ C+ A L + + G +
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L+++L V AL + + M R + P+ TY L+ F +G A+ +
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525
Query: 510 EMLESGMLPDSQICRVLINGYC-MEKDVNKAEALL 543
+ L G + +I G+C MEK V E L
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFL 560
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 4/356 (1%)
Query: 249 VFCKNGDVDKV--NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
V CKN + + + E F P ++ ++ Y +KG A ++ M +
Sbjct: 160 VLCKNNYIASAVWDELVSVYREFSFSP--TVFDMILKVYAEKGMTKFALCVFDNMGKCGR 217
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+P L + +L++ L + G+ +A ++ +M+ G+ PDI SY ++ AYCKEG++ E+ +
Sbjct: 218 VPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFN 277
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ EM + P+ T ++ GY G + A ++ + G+ + Y LI C
Sbjct: 278 FVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYC 337
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A L + + +Y L+ + C V DAL ++D M+ +K +
Sbjct: 338 KRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTV 397
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+LI +C +G +A ++ M + + PDS L++G+C ++D KA L
Sbjct: 398 ICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEM 457
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + +YN + G + + + + G APN +T ++ + +K
Sbjct: 458 HNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFK 513
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 102/193 (52%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY G + ++ + L VG + + V CN L+NG KL +++ +V M + P
Sbjct: 370 AYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKP 429
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++ +N L FCK D K +++ +G + +VTYNTL+ + G + A +++
Sbjct: 430 DSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIW 489
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M++R V P+ VTY TL++ K G A ++ + +G + I YNT+I +CK
Sbjct: 490 NLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKM 549
Query: 359 GKMQESKSLLYEM 371
K+ +++ + +M
Sbjct: 550 EKLVQAQEIFLKM 562
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 202/408 (49%), Gaps = 10/408 (2%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P +++ N ++ G + N ID +QV + M G P+ T+NIL C G +D
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
F ++ +E P +VTY LI + +G +++A L M N+ PD+ TY +++ G+C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+EG V A Q+ + +G +PD+++YN L+ +GK + L+ +M+ G +
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T +++ ++G++ + L+ ++++ G+ YD LI ALC++ R A +L+ +
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG VP + YN ++ LCK +AL + +++ + P+ S+Y ++ G
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE----- 556
A+ ++ EML+ G+ PD LI+ C + V++A LL ++ +E
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL----VDMEMESSECKPSV 478
Query: 557 -SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
SYN V + +S +E+ + G PN T ++I + G
Sbjct: 479 VSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFG 526
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 182/373 (48%), Gaps = 2/373 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + I +++ + + GF P IV+ N L+ L +D + ++ + P
Sbjct: 135 GFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKP 194
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ IL G +D+ L+++ E PD+ TYN++I C++G ++ AF +
Sbjct: 195 TVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQII 254
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD++TY L+ GL +GK ++L MV RG ++V+Y+ LI + C++
Sbjct: 255 SSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRD 314
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK++E LL +M G+ PD + ++ KEGR+ A+ ++ + G Y
Sbjct: 315 GKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNY 374
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ LC+ R A S+ E++G+ G P+ YN + +L AL + EM+D
Sbjct: 375 NTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLD 434
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM-LESGMLPDSQIC-RVLINGYCMEKDV 536
+ + P TY +LI C C G EA+ L+ +M +ES S + +++ G C V
Sbjct: 435 KGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRV 494
Query: 537 NKAEALLGFFAKK 549
+ A +L K
Sbjct: 495 SDAIEVLAAMVDK 507
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 172/361 (47%), Gaps = 2/361 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ + + + L +P++V+ L+ L ID+ ++ +EM I + P+ T+
Sbjct: 175 GMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTY 234
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + C+ G VD+ + I +G+ PD++TYN L+ +G+ + L M
Sbjct: 235 NSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA 294
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++VTY+ L++ +C++GKV E L M +GL PD Y+ LI A CKEG++
Sbjct: 295 RGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDL 354
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M+ +G PD I+ K+ R AL++ +L G S + Y+ +
Sbjct: 355 AIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFS 414
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA--LLLKDEMVDRNI 481
AL A ++ + G P YN L+ LC+ V +A LL+ EM
Sbjct: 415 ALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSEC 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
KPS+ +Y ++ C + R +A+ ++ M++ G P+ LI G +N A
Sbjct: 475 KPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARD 534
Query: 542 L 542
L
Sbjct: 535 L 535
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 181/397 (45%), Gaps = 50/397 (12%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
SAL F N + + KPT Y +++ AMK+L E++E+ + + +
Sbjct: 179 SALEFKNQLLKE-NCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEI--NLQPDMFTYN 235
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I + G + +F+ G+ P +++ N LL GLL + +++
Sbjct: 236 SIIR-------GMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYEL 288
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+M G N T+++L C++G V++ G L+ ++++G PD Y+ LI++ CK
Sbjct: 289 MSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCK 348
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+GR++ A + +M +PD+V Y T++ LCK+ + EA +F ++ G SP+ S
Sbjct: 349 EGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASS 408
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN++ A G + ++ EM+ G+ PD T
Sbjct: 409 YNSMFSALWSTGHKVRALGMILEMLDKGVDPDGIT------------------------- 443
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY--VPSLEIYNELMESLCKCDS 465
Y+ LI LC+D A LL + + PS+ YN ++ LCK
Sbjct: 444 ----------YNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSR 493
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
V+DA+ + MVD+ +P+ +TY LI GIG G
Sbjct: 494 VSDAIEVLAAMVDKGCRPNETTYTFLI---EGIGFGG 527
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 34/354 (9%)
Query: 282 ISSYCKKGRLNDAFYLYRIM----YRRNVL------------------------------ 307
+S CK G N++ Y R + ++ +V+
Sbjct: 64 LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH 123
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PDL+ Y ++ G C+ ++ A+Q+ RM ++G SPDIV+YN LI + C G + +
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+++ P T I+++ +G + A+ L+ E+ + Y+ +I +C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A ++ I GY P + YN L+ L L +MV R + ++ T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G+ E V L+ +M + G+ PD LI C E V+ A +L
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ D +YN + + + + + ++ +G +PN + M +LW
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALW 417
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 2/191 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + + + + G P IV+ N +L L K D+ ++E++G +G P
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 404
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++N + G + G + ++ ++G DPD +TYN+LIS C+ G +++A L
Sbjct: 405 NASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELL 464
Query: 299 RIMYRRN--VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M + P +V+Y ++ GLCK +V +A ++ MV +G P+ +Y LI
Sbjct: 465 VDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIG 524
Query: 357 KEGKMQESKSL 367
G + +++ L
Sbjct: 525 FGGCLNDARDL 535
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 123/282 (43%), Gaps = 1/282 (0%)
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK G E+ +V++G PD+V LI + ++ +++ + +G +PD
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
I+ G+ + R+ SA ++ ++ G S Y+ LI +LC +A +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ ++ P++ Y L+E+ + +A+ L DEM++ N++P + TY ++I C G
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A ++ + G PD +L+ G + L+ + + +Y+
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + DG + + + L K + G P+ +I +L K
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCK 348
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 197/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N D + E M + I + +++NIL + FC+ +
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 121
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 122 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 181
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG PD+ +Y T++ CK G + + SLL +M I D
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ + ALNL E+ G+ + Y+ LI LC R A+ LL +
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ ++ L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LI G+C K V + L +++ + +T +YN +
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD ++ K+ + G P+ +T ++ L K
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 461
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 211/453 (46%), Gaps = 35/453 (7%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ + + +QP+ V+ N L++GL N + + + M G P+ T+
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209
Query: 246 LTHVFCKNGDVDKVNGFLEKIEE-----------------------------------EG 270
+ + CK GD+D L+K+E+ +G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++VTYN+LI C GR +DA L M R + P++VT++ L++ KEGK+ EA
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+ T +++G+
Sbjct: 330 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 389
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K R+ + L E+ + G+ + Y+ LI L Q A + +++ DG P +
Sbjct: 390 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 449
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L++ LCK + AL++ + + ++P + TY +I C G+ + L
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 509
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+ G+ P+ I +I+G+C + +A+AL + + ++ +YN + DGD
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 569
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ EL K GF + T +I+ L G
Sbjct: 570 KAASAELIKEMRSCGFVGDASTISMVINMLHDG 602
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 10/454 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+E +P + + ++H L +NK S A+ ++ +V + C + + +++
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV--ARGCQPDLFTYGTVVN-------G 213
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K G I + +K + +V +++ L ++ ++ EM GI PN
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L C G + L + E +P++VT++ LI ++ K+G+L +A LY
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +R++ PD+ TY++L+NG C ++ EA +F M+ + P++V+YNTLI +CK
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++E L EM G+ +T T ++QG + G A + ++ GV Y
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+ + A + E + + P + YN ++E +CK V D L + +
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+KP++ Y +I FC G EA +L EM E G LP+S LI + D +
Sbjct: 514 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 573
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
L+ + D + + V NM DG L K
Sbjct: 574 AELIKEMRSCGFVGDASTISMVINML-HDGRLEK 606
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N LL L +D ++ EM + P+ FN L K D V E+++
Sbjct: 38 NVLLDLK-LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 96
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
DL +YN LI+ +C++ +L A + M + PD+VT ++L+NG C ++ EA L
Sbjct: 97 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 156
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M P+ V++NTLI K E+ +L+ M+ G PD FT +V G K
Sbjct: 157 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 216
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + AL+L+ ++++ + IY +I ALC A +L + G P++
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LC +DA L +M++R I P++ T+ ALI F G+ EA L DEM+
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + PD LING+CM +++A+ + K + +YN + F + +
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ MEL + + G N +T +I L++
Sbjct: 397 EGMELFREMSQRGLVGNTVTYNTLIQGLFQA 427
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 164/339 (48%), Gaps = 10/339 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + N I+P Y ++ L ++S A ++L +++E + +V F
Sbjct: 258 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSA 314
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A+VK G + E+ K + + + P I + + L+NG + +D+ ++
Sbjct: 315 LID-------AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M PN T+N L FCK V++ ++ + G + VTYNTLI +
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 427
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + A +++ M V PD++TY+ L++GLCK GK+ +A +F + + PDI +Y
Sbjct: 428 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 487
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I CK GK+++ L + G+ P+ ++ G+ ++G A L E++
Sbjct: 488 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 547
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G + Y+ LI A +D A+ L++ + G+V
Sbjct: 548 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F +P I + N ++ G+ K ++ W ++ + G+ PN
Sbjct: 461 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 520
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + FC+ G ++ + +++E+G P+ TYNTLI + + G + L + M
Sbjct: 521 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D T + ++N L +G++ +++
Sbjct: 581 RSCGFVGDASTISMVINML-HDGRLEKSY 608
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 199/400 (49%), Gaps = 2/400 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP + + N L+NG K+N ID +V + M P+T T+NI+ C G +D
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L+++ + P ++TY LI + +G +++A L M R + PD+ TY T++ G+C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KEG V A ++ + +G PD++SYN L+ A +GK +E + L+ +M P+
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I++ ++G++ A+NL+ ++ G++ YD LI A C++ R A LE +
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG +P + YN ++ +LCK AL + ++ + P+ S+Y + G
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNA 560
A+ ++ EM+ +G+ PD +I+ C E V+KA E L+ + +F +YN
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHP-SVVTYNI 509
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
V F + + +++ + G PN T +I +
Sbjct: 510 VLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 170/346 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + K + L QP++++ L+ + +D+ ++ +EM G+ P+ T+
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK G VD+ + +E +G +PD+++YN L+ + +G+ + L M+
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY+ L+ LC++GK+ EA L M +GL+PD SY+ LI A+C+EG++
Sbjct: 323 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 382
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ +G PD ++ K G+ AL + +L G S + Y+ +
Sbjct: 383 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 442
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
AL A ++ + +G P YN ++ LC+ V A L +M P
Sbjct: 443 ALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHP 502
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
S+ TY ++ FC R +A+ ++D M+ +G P+ VLI G
Sbjct: 503 SVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 192/393 (48%), Gaps = 9/393 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ P + Y +++ L K A+K+L +L L +C +V + LI T
Sbjct: 184 DFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL--LSDNCQPTVITYTILIEAT------- 234
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + E+ K + L G +P + + N ++ G+ K +D+ +++ + G P+
Sbjct: 235 MLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDV 294
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++NIL G ++ + K+ E DP++VTY+ LI++ C+ G++ +A L ++
Sbjct: 295 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 354
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + PD +Y L+ C+EG++ A + M+ G PDIV+YNT++ CK GK
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 414
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ + ++ G P++ + + G + AL++++E+ G+ Y+
Sbjct: 415 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNS 474
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC++ A LL + + PS+ YN ++ CK + DA+ + D MV
Sbjct: 475 MISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+P+ +TY LI G EA+ L ++++
Sbjct: 535 CRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 567
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 181/386 (46%), Gaps = 2/386 (0%)
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ + E M R G P+ L F +V K +E +E+ G PD+ YN LI
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK R++DA + M ++ PD VTY ++ LC GK+ A ++ +++
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQ 221
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P +++Y LI A EG + E+ LL EM+ G+ PD FT I++G KEG + A +
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ L+ G Y+ L+ AL + L+ ++ + P++ Y+ L+ +LC+
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A+ L M ++ + P +Y LI FC GR A+ ++ M+ G LPD
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
++ C ++A + G + ++ SYN +F+ GD + + + +
Sbjct: 402 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMV 461
Query: 583 RLGFAPNNLTCKYMIHSLWK-GMERK 607
G P+ +T MI L + GM K
Sbjct: 462 SNGIDPDEITYNSMISCLCREGMVDK 487
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 1/359 (0%)
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C++G+ + LE + +G++PD++ LI + + A + I+ +
Sbjct: 93 HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ- 151
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ Y L+NG CK ++ +A ++ RM + SPD V+YN +I + C GK+ + +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +++ + P T I+++ EG + AL L+ E+ G+ Y+ +I +C+
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A ++ + G P + YN L+ +L + L +M P++ T
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G+ EA++L+ M E G+ PD+ LI +C E ++ A L
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+ D +YN V ++G + +E+ + +G +PN+ + M +LW ++
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 450
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 191/400 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI + LL+ + K+ D ++E+M +GI N T NIL + FC+ + F
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G +PD+VT+ +L++ +C+ R+ DA Y++ M P++V Y T+++GLCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V A L +RM G+ PD V+YN+LI C G+ ++ ++ M IYPD FT
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ KEGR+ A L E+ R + Y LI LC +R A + +
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P + Y+ L+ CK V + L EM R + + TY LI +C G+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A + M+ G+ P+ VL++G C + KA +L K D +YN +
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G+++ +L G P+ T M+ L+K
Sbjct: 439 RGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYK 478
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 173/349 (49%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +G +P IV+ LLNG + + I +++ M +G PN +N + CK+
Sbjct: 141 KMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSK 200
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
VD L ++E +G PD VTYN+LIS C GR +DA + M +R + PD+ T+
Sbjct: 201 QVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFN 260
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ KEG++ EA +L+ M+ R L PDIV+Y+ LI+ C ++ E++ + M+
Sbjct: 261 ALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK 320
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G +PD T I++ GY K ++ + L E+ + GV + Y LI C+ + A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVA 380
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + + G P++ YN L+ LC + AL++ +M + + TY +I
Sbjct: 381 EEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRG 440
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
C G +A L + G+ PD ++ G + +A+AL
Sbjct: 441 MCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALF 489
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 178/334 (53%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F + +++G++P++V N +++GL K +D + M GI P+ T+N
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L C +G D + + + PD+ T+N LI + K+GR+++A LY M RR+
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD+VTY+ L+ GLC ++ EA Q+F MV +G PD+V+Y+ LI YCK K++
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM G+ +T T +++QGY + G+L A + + GV + Y+ L+ L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGL 406
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C + + A +L + + G + YN ++ +CK VADA L + + + P +
Sbjct: 407 CDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDI 466
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
TY A++ G GEA +L +M E G+LP+
Sbjct: 467 WTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 147/322 (45%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y ++ + + +L+D+ L+ M + LP + ++ L++ + K K L+ +M
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ ++ + N L+ +C+ ++ + S L +MM G PD T ++ G+ + R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + + G + IY+ +I LC+ + A LL R+ DG P YN L+
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC DA + M R I P + T+ ALI GR EA L +EM+ +
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD +LI G CM +++AE + GF K D +Y+ + N + + + M+L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 578 QKRFLRLGFAPNNLTCKYMIHS 599
+ G N +T +I
Sbjct: 349 FCEMSQRGVVRNTVTYTVLIQG 370
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 9/223 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y L+++ L ++ A +M +V K C V + LI+ Y
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVS--KGCFPDVVTYSILIN-------GYC 337
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + K F + G + V+ L+ G + ++ ++++ M G+ PN
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNII 397
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L H C NG ++K L +++ G D D+VTYN +I CK G + DA+ LY +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL 457
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+ + PD+ TYT +M GL K+G EA LF +M G+ P+
Sbjct: 458 NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 66/150 (44%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y E++ + + + D+L L MV PS++ + L+ + + + L ++M
Sbjct: 49 YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ + C +L+N +C ++ A + LG K D ++ ++ N F +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + R + +G+ PN + +I L K
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L ++ K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLC-THQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEM+++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 202/413 (48%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F+K G P + + N L+N L I + V + + G PN T N L C
Sbjct: 86 FKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCF 145
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G++ K F +++ +GF + V+Y TLI+ CK G L R + +V PD+V
Sbjct: 146 RGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVM 205
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y T+++ LCK + +A L+ M+ +G+SP++V+YN L++ +C G ++E+ SLL EM
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMK 265
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I PD T ++ GKEG++ +A ++ + + + Y+ LI N+
Sbjct: 266 LKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVK 325
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + + Q G P++ Y +++ LCK V +A+ L +EM +N+ P + TY +LI
Sbjct: 326 NAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLI 385
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C A++L +M E G+ PD +L++ C + A+ K
Sbjct: 386 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ ++YN + N + + M+L+ + G P+ +T K +I +L++ E
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 170/343 (49%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F L G+ P+ ++ N L+ GL I + ++++ G N ++ L +
Sbjct: 117 AFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLIN 176
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G+ V L K+E PD+V YNT+I S CK L DA LY M + + P
Sbjct: 177 GLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISP 236
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++VTY L+ G C G ++EA L + M + ++PD+ ++NTLI A KEGKM+ +K +L
Sbjct: 237 NVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVL 296
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
MM I PD T ++ GY ++ +A + + + GV+ + Y +I LC++
Sbjct: 297 AVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKE 356
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A SL E + +P + Y L++ LCK + A+ L +M ++ I+P + +Y
Sbjct: 357 KMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 416
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L+ C GR A +L G + Q V+ING C
Sbjct: 417 TILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 189/375 (50%), Gaps = 12/375 (3%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + RK +P +V N +++ L K + +Y EM GI PN
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FC G + + L +++ + +PD+ T+NTLI + K+G++ A + +M
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + PD+VTY +L++G KV+ A +F+ M G++P++ +Y T+I CKE +
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMV 359
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ SL EM + PD T ++ G K L A+ L +++ G I D+Y Y
Sbjct: 360 DEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG--IQPDVYSYT 417
Query: 422 IV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I+ ALC+ R A +R+ GY +++ YN ++ LCK D +A+ LK +M +
Sbjct: 418 ILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGK 477
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM-------LPDSQICRVLINGYCM 532
P T++ +IC + +A ++ EM+ G+ L +++I ++ C+
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACI 537
Query: 533 EKDVNKAEALL-GFF 546
+ DV L+ G+F
Sbjct: 538 KPDVVTYGTLMDGYF 552
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 199/427 (46%), Gaps = 23/427 (5%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P +V+ N L++G LN + V+ M + G+ PN T+ + CK VD+
Sbjct: 305 KPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMS 364
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
E+++ + PD+VTY +LI CK L A L + M + + PD+ +YT L++ LC
Sbjct: 365 LFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALC 424
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K G++ A + F R++ +G ++ +YN +I CK E+ L +M G G PD
Sbjct: 425 KGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAI 484
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI-----------------------Y 418
T + I+ ++ A ++ E+ G+ +R + Y
Sbjct: 485 TFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTY 544
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ N A + + Q G P+++ Y +++ LCK +V +A+ L +EM
Sbjct: 545 GTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKH 604
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+N+ P++ TY +LI C A++L+ EM E G+ PD +L++G C +
Sbjct: 605 KNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEG 664
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ + K + + Y A+ N + G + ++LQ + G P+ +T +I
Sbjct: 665 AKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIW 724
Query: 599 SLWKGME 605
+L++ E
Sbjct: 725 ALFEKDE 731
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 170/366 (46%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T FN + N V +K E G PDL T N L++ +C + AF +
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ +R P+ +T TL+ GLC G++++A ++V +G + VSY TLI CK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ + LL ++ G+ + PD I+ K L A +L E+ G+S +
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ C A SLL + P + +N L+++L K + A ++ M+
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
IKP + TY +LI + + + A + M +SG+ P+ + +I+G C EK V+
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A +L K I D +Y ++ + ++ L + + L K+ G P+ + ++
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420
Query: 598 HSLWKG 603
+L KG
Sbjct: 421 DALCKG 426
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 185/386 (47%), Gaps = 25/386 (6%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K ++ E+ F + P IV+ L++GL K + +++ + ++M GI P+ +
Sbjct: 355 KEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ IL CK G ++ F +++ +G+ ++ TYN +I+ CK +A L M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------- 342
+ +PD +T+ T++ L ++ + +A ++ M+ RGL
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534
Query: 343 ----PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
PD+V+Y TL+ Y +++ +K + Y M G+ P+ I++ G K+ +
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A++L E++ + + Y LI ALC+++ A +LL+ + + G P + Y L++
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LCK + A + ++ + ++ Y A+I C G EA+ L +M + G +P
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714
Query: 519 DSQICRVLINGYCMEKDVN-KAEALL 543
D+ ++I EKD N KAE +L
Sbjct: 715 DAVTFDIIIWA-LFEKDENDKAEKIL 739
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 164/351 (46%), Gaps = 27/351 (7%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
+K + G QP + S LL+ L K ++ + ++ + G N T+N++ + CK
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY-----------------------CKKGR 290
+ K+E +G PD +T+ T+I + +K R
Sbjct: 462 DLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVR 521
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L +A + +M + + PD+VTY TLM+G +++ A +F+ M G++P++ Y
Sbjct: 522 LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I CK+ + E+ SL EM ++P+ T ++ K L A+ L+ E++ G
Sbjct: 582 MIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHG 641
Query: 411 VSISRDIYDYLIV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
I D+Y Y I+ LC+ R A + +R+ GY ++++Y ++ LCK +
Sbjct: 642 --IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDE 699
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
AL L+ +M D+ P T+ +I + +A ++ EM+ G++ +
Sbjct: 700 ALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 104/265 (39%)
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F RM+ P +N ++ + SL + NG PD T I++ +
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ A +++ + + G + + LI LC A +++ G+ +
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y L+ LCK L ++ ++KP + Y +I C G+A L EM+
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ P+ L+ G+C+ + +A +LL K D ++N + + ++G +
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMI 597
+ ++ P+ +T +I
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLI 315
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G LN
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +++ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M+ +GL PD +Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY PS+
Sbjct: 385 TMIINEFCKKGDVWXGSKLLKEMQRDGYKPSV 416
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 125 EENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLNEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA +L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L + G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 591 LTCKYMI 597
T +I
Sbjct: 312 FTYTTLI 318
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 196/412 (47%), Gaps = 5/412 (1%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
F L G P++ + ++ L N +D + +M + G PN+ + L H
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+ V + LE++ G PD+ T+N +I CK +++DA L M R PD +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY L++GLC+ GK+ EA ++ ++ P+ NTLI Y G+++E++S L E
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNET 380
Query: 372 MGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M N G PD FT I++ G KEG L A +LV E+ R G + Y L+ LC+
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A +L + G + IYN L+ +LC+ + V AL L EM + KP L TY +
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C + R EA L ML G + ++ LI+ KA L+ +
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + F + G++ K +EL ++ + G + ++C MI+ L K
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 226/505 (44%), Gaps = 47/505 (9%)
Query: 123 KPTSSNYCLIVHILAWNN----------------------KFSFAMKMLCELVELVKDC- 159
+PT +Y L++ IL N F MK LC E+ C
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239
Query: 160 -----------PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
P+S+ V+Q LI N + E+ K + +G P + +
Sbjct: 240 LLRDMTKHGCVPNSI-VYQTLIHALSQKNQ-------VSEALKLLEEMFVMGCMPDVQTF 291
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +++GL K+N I ++ + M G P+ T+ L H C+ G +++ L KI
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP- 350
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
P+ NTLI+ Y G+L +A +L M PD+ TY LM+GLCKEG +
Sbjct: 351 ---CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A L + M RG P++++Y L+ CK G ++E+ +L+EM G+ ++ ++
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
++ ++ ALNL+ E+ G Y+ LI LC+ +R A L + DG V
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ YN L+ +L + + AL L ++M+ R TY LI FC +G + + L
Sbjct: 528 ANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
++M+ G+ D+ C ++ING C V+ A L + + D +YN+V N +
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLT 592
G + + + L R G P+ T
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFT 672
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 200/416 (48%), Gaps = 16/416 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L K + A K+L ++ CP++ + LI+ YV
Sbjct: 321 PDNMTYGFLLHGLCRIGKLNEARKILIKI-----PCPNNA-ILNTLIN-------GYVMS 367
Query: 184 GLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G ++E+ +T+ + GFQP I + N L++GL K + + EM R G PN T
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL + CK G +++ L ++ G + V YN LI + C+K +++ A L M
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PDL TY +L+ GLCK ++ EA +LFH M+ G + V+YNTLI A + G Q
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +L+ +M+ G D T +++ + K G + L L ++ G+ + +I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ + A L G+VP + YN ++ LCK + +AL L D + ++
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P TY I C G +A S +E+G +P + VL+ Y + K N+
Sbjct: 668 PDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLV--YTLLKQSNQ 721
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 161/368 (43%), Gaps = 9/368 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +F N + +P Y +++H L SFA ++ E+ + C +V +
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR--RGCEPNVITYAI 430
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ K GL+ E+ + G + V N L+ L + + +
Sbjct: 431 LVN-------GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
EM G P+ T+N L + CK +D+ + +G + VTYNTLI + ++
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G A L M R D +TY L+ CK G + + +L+ +M+ GL D +S
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I CK GK+ + L + + G PD T ++ G K GR+ ALNL LQ
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GV Y+ I C++ A S R ++G+VPS +N L+ +L K + +
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723
Query: 469 ALLLKDEM 476
+ DE+
Sbjct: 724 NFFVLDEL 731
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 41/281 (14%)
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF--------- 409
GK + LL +M GI II++ YGK G+ A+ L+++++
Sbjct: 126 GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKS 185
Query: 410 ---------------------------GVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
GVS + + ++ ALC N +A SLL +
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMT 245
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G VP+ +Y L+ +L + + V++AL L +EM P + T+ +I C + +
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH 305
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L+D ML G PD+ L++G C +N+A +L K + N +
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKIPCPNNAILNTLI 361
Query: 563 NMFAEDGDLSKLME-LQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + G L + L + + GF P+ T ++H L K
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 229/503 (45%), Gaps = 48/503 (9%)
Query: 79 LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN---YCLIVHI 135
LQ+ L L P L + + L ++ + AL FF WV E K + N Y L++ I
Sbjct: 175 LQSSLAELAPSLSKTTVLQTLQLIRTPA-KALHFFRWV----EAKGFTHNEQSYFLMIEI 229
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
L + + A + S + A ES K F+
Sbjct: 230 LGRSRNLNAARNFV--------------------FSIEKKSGGA--------ESIKVFKT 261
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNG 254
++G PS+V+ N LL+ +LK Q+++EM G+ P+T+TFNIL FC N
Sbjct: 262 MKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNS 321
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVT 312
VD+ F +++ DPD+VTYNTL+ C+ G++ A + + M ++ N+ P++VT
Sbjct: 322 MVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVT 381
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YTTL+ G C + + EA L MV RGL P+ ++YNTLI C+ K+ + K +L M+
Sbjct: 382 YTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMV 441
Query: 373 GNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G+G + PDT T +++ + G+L A ++ ++ V Y L+ +LCQ
Sbjct: 442 GDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDF 501
Query: 432 FAATSLLERIGQD-------GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
A + + + G P + YN + E LC A + +++ R +
Sbjct: 502 RRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDP 561
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S Y+ LI C G L+ ML +PD++ ++I+G + D A L
Sbjct: 562 PS-YKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLE 620
Query: 545 FFAKKFQIYDTESYNAVFNMFAE 567
K + T ++++ E
Sbjct: 621 KMLKSSHLPTTAIFHSILAALVE 643
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 170/388 (43%), Gaps = 47/388 (12%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG-FLEKIEEEGFDPDLVTYNTLISS 284
+V++ M IG+ P+ TFN L + K G F E ++ G PD T+N LI
Sbjct: 257 KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRG 316
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LS 342
+C +++ F+ ++ M R PD+VTY TL++GLC+ GKV+ AH + MV + LS
Sbjct: 317 FCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLS 376
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P++V+Y TLI YC + M E+ SLL EM+ G+ P+ T
Sbjct: 377 PNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT-------------------- 416
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE-RIGQDGYVPSLEIYNELMESLC 461
Y+ LI LC+ + +LE +G G++P N L+++ C
Sbjct: 417 ---------------YNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHC 461
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +A + ++M + ++P +TY L+ C G A DE+ E +L
Sbjct: 462 TMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDV 521
Query: 522 ICRVLINGY-------CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
C+ L+ Y C KAE + K+ D SY + +G
Sbjct: 522 GCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKR-GTQDPPSYKTLILGHCREGTPEAG 580
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L LR F P+ T MI L K
Sbjct: 581 FDLLVLMLRRDFVPDAETYGLMIDGLLK 608
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 226/537 (42%), Gaps = 73/537 (13%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+S ++ F +K ++ + P+ + ++ I+ + S A ++ E+++ P +
Sbjct: 249 KSGGAESIKVFKTMK-EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDT 307
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN--- 219
F LI + ++ E F F++ P +V+ N L++GL +
Sbjct: 308 Y-TFNILIR-------GFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVK 359
Query: 220 ------------------------------CIDQ----CWQVYEEMGRIGICPNTHTFNI 245
C+ Q + EM G+ PN T+N
Sbjct: 360 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 419
Query: 246 LTHVFCKNGDVDKVNGFLEK-IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L C+ +DK+ LE + + GF PD T NTLI ++C G+L +AF ++ M
Sbjct: 420 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 479
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-------GLSPDIVSYNTLIFAYCK 357
V PD TY+ L+ LC+ G R A + F + + G P + +YN + C
Sbjct: 480 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 539
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
GK ++++ + ++M G D + + ++ G+ +EG + +L+V + R +
Sbjct: 540 NGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAET 598
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y +I L + P A LE++ + ++P+ I++ S+ AL+ K+ +
Sbjct: 599 YGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFH----------SILAALVEKERRI 648
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+NI S T R L G +A + + E+G L + L++ C + +
Sbjct: 649 RQNIDLSTHTVRLLYKS----GLQDKAFMTIGLLYENGYLVKME---ELVSFLCQSRKLL 701
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+A+ +L F +K Q D + + V + + +S+ L + G + LTC+
Sbjct: 702 EAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQ-HRLTCQ 757
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 11/331 (3%)
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
IE G +L + S KK ++ +++ M V P +VT+ +L++ + K G+
Sbjct: 227 IEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGR 286
Query: 326 VREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
A QLF M+ G++PD ++N LI +C + E EM PD T
Sbjct: 287 TSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYN 346
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIG 442
+V G + G++ A N+V + + ++S ++ Y LI C A SLL +
Sbjct: 347 TLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMV 406
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRS 501
G P+ YN L++ LC+ + + + MV D P T LI C +G+
Sbjct: 407 SRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKL 466
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA-KKFQIYD------ 554
EA S+ ++M E + PDS VL+ C D +AE A K+ ++D
Sbjct: 467 EEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPL 526
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+YN +F +G K + ++ ++ G
Sbjct: 527 VAAYNPMFEYLCSNGKTKKAERVFRQLMKRG 557
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 26/341 (7%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D GF P + N L+ + +++ + V+E+M + + P++ T+++L C+ GD
Sbjct: 443 DGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFR 502
Query: 258 KVNGFLEKIEEE-------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+ F +++ E+ G P + YN + C G+ A ++R + +R D
Sbjct: 503 RAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGT-QDP 561
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+Y TL+ G C+EG L M+ R PD +Y +I K+G + L +
Sbjct: 562 PSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEK 621
Query: 371 MMGNGIYPDTFTCQIIVQG-YGKEGRLLSALNLVVELQR--FGVSISRDIY--------- 418
M+ + P T I+ KE R+ ++L R + + +
Sbjct: 622 MLKSSHLPTTAIFHSILAALVEKERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYEN 681
Query: 419 ------DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ L+ LCQ + A +L + +++ + ++ LCK V++A L
Sbjct: 682 GYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFAL 741
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
E+V++ ++ L+ L GR EA + +M E
Sbjct: 742 YYELVEKGMQHRLTCQEDLRISLEAEGRLNEAKFVSKKMPE 782
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 184/362 (50%), Gaps = 1/362 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG E++K F+ ++ + ++N L KLN +++ ++ E+M R P+
Sbjct: 57 KVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDAL 115
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + CK +D +E++ G PD YN ++S C++ ++ +A L+ M
Sbjct: 116 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 175
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + P++VTY TL+NGLCK ++ A++LF M +G P VSYNTLI +CK+ +
Sbjct: 176 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 235
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+K + +M+ + P+ T ++ G K G++ +A ++ + + GV+ + Y L
Sbjct: 236 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 295
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ R A LLE++ G P++ YN L+ SLC+ D + DA L M R
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY L+ C + A L EM+ G PD+ L G V++A+
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415
Query: 542 LL 543
L+
Sbjct: 416 LM 417
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 1/390 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + N + +G K ++Q +VY+ M G + IL CK G+ D+
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + F + Y+T+I+ CK R+ +A L M R PD +TY ++ LCK
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCK 126
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
++ +A M RG+ PD YN ++ C+E K++E++ L +M+ I P+ T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K R+ +A L E+ G + Y+ LI C+ AA + +++
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ VP++ Y L++ L K V A + D MV + + P+++TY LI FC + R
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L+++M+ G+ P +L+N C + A L A++ +YN +
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
L L + G P+ +T
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAIT 396
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 186/403 (46%), Gaps = 1/403 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + + + ++ ++ G+ L++ L K+ D+ +++ M
Sbjct: 19 GFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKR 78
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ + + CK V++ +EK+ PD +TY ++ CK R++DA
Sbjct: 79 KAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATV 137
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + PD Y +++GLC+E KV EA LF +MV + ++P++V+YNTLI CK
Sbjct: 138 EEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKA 197
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ + L EM G G P + ++ G+ K+ L++A ++ ++ R + Y
Sbjct: 198 WRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTY 257
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI L + + AA +L+ + + G P++ Y+ L++ CK V +A L ++MV
Sbjct: 258 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 317
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ I P++ TY L+ C + +A L M + P L+ C K ++
Sbjct: 318 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDG 377
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
A L K D +Y+ + G + + EL ++
Sbjct: 378 AHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 171/365 (46%), Gaps = 1/365 (0%)
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P TFN + F K G +++V + + E G+ Y LIS CK G ++A+
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + + Y+T++N LCK +V EA +L +M R PD ++Y ++
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERL 124
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK ++ ++ + + EM GI PD F ++ G +E ++ A L ++ + ++ +
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNV 184
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI LC+ R A L + + GYVP+ YN L++ CK + A + D+
Sbjct: 185 VTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
MV N P++ TY LI G+ A ++D M++ G+ P+ LI+G+C +
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V++A LL + +YN + N L +L + + P +T
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364
Query: 596 MIHSL 600
++ +L
Sbjct: 365 LLRAL 369
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K I +++ F++ G+ P+ VS N L++G K + V+++M R PN
Sbjct: 196 KAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVV 255
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L K+G V L+ + ++G P++ TY+ LI +CK R+++A L M
Sbjct: 256 TYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQM 315
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P +VTY L+N LC+ K+ +A +LF M R P +V+YNTL+ A C ++
Sbjct: 316 VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQL 375
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+ L EM+ G PD T + G + G++ A L+ +++
Sbjct: 376 DGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 1/302 (0%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R V+P T+ T+ +G K G++ + +++ MV G + Y LI CK G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E+ LL+ M I+ K R+ A L+ ++ R+ + Y
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDAL-TYGP 119
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ LC+ R A + +E + G P IYN ++ LC+ + V +A LL ++MV +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P++ TY LI C R A L EM G +P LI+G+C +KD+ A+
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + + +Y + + ++ G + E+ ++ G PN T +I
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 601 WK 602
K
Sbjct: 300 CK 301
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 189/389 (48%), Gaps = 2/389 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ SCN LL LL + + + G P+T +N + GD+D
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 263 LEKI--EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ ++ E PD +YN +I+ + G+ +DA ++ M V+P+ +TY T+++G
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K G + +L +M+H G P+IV+YN L+ C+ G+M E++ L+ EM + ++PD
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT I+ G + G + L+L E + GV + L+ LC+D + A +LE
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G VP+ IYN L+ C+ + A + ++M R+I+P TY ALI C +
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A L+ EM +SG+ P + LI+ Y + K +L +K D S+ +
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
V F ++G + + + + + APN
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 207/419 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++ K F + +D+G P+ ++ N +++G +K ++ +++ ++M G PN
Sbjct: 206 RSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIV 265
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L C+ G +D+ ++++ PD TY+ L + G L+
Sbjct: 266 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 325
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ V+ T + L+NGLCK+GKV +A Q+ +VH GL P V YNTLI YC+ +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 385
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + + +M I PD T ++ G K + A +LV+E+++ GV S + ++ L
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A + ++L + Q G + + ++++ CK + +A+ + D+M+ +++
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ Y ++I + G + +A L+++M SG+ +L+ G C +++AE
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L+ + D SYN + + GD K +EL + + G P T ++ +L
Sbjct: 566 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 624
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 231/499 (46%), Gaps = 44/499 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y +++ L + K S A+K+ E+V++ P+ + + +I +VK
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWI-TYNTMID-------GHVKG 242
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F+ + L G +P+IV+ N LL+GL + +D+ + +EM + P+ T+
Sbjct: 243 GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 302
Query: 244 NIL-----------------------------------THVFCKNGDVDKVNGFLEKIEE 268
+IL + CK+G V K LE +
Sbjct: 303 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 362
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P V YNTLI+ YC+ L AF ++ M R++ PD +TY L+NGLCK V +
Sbjct: 363 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 422
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L M G+ P + ++NTLI AY G++++ ++L +M GI D + +V+
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 482
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ K G++ A+ ++ ++ V+ + +Y+ +I A + A L+E++ G
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 542
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S+ YN L++ LC+ + +A L + ++ ++P + +Y +I C G + +A+ L+
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM + G+ P + L++ V+ E L K + Y + + +
Sbjct: 603 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662
Query: 569 GDLSKLMELQKRFLRLGFA 587
+ SK+ L+K G A
Sbjct: 663 ENDSKVASLKKEMSEKGIA 681
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G R F ++L G +C+ LLNGL K + + QV E + G+ P T
Sbjct: 310 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 369
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N L + +C+ D+ E+++ PD +TYN LI+ CK + A L
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + V P + T+ TL++ G++ + + M +G+ D++S+ +++ A+CK GK
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ ++L +M+ + P+ I+ Y + G A LV +++ GVS S Y+
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ ++ A L+ + G P + YN ++ + C AL L EM
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I+P+L TY L+ GR + L +ML + P S I ++++ Y ++ +K
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669
Query: 541 ALLGFFAKKFQIYD 554
+L ++K +D
Sbjct: 670 SLKKEMSEKGIAFD 683
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 187/422 (44%), Gaps = 2/422 (0%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI--GICPNT 240
VG + F + G +P + N ++ + +D + MGR P+
Sbjct: 135 VGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDA 194
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++N++ ++G +++ + G P+ +TYNT+I + K G L F L
Sbjct: 195 FSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQ 254
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M P++VTY L++GLC+ G++ E L M + PD +Y+ L + G+
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ SL E + G+ +TC I++ G K+G++ A ++ L G+ + IY+
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI CQ A + E++ P YN L+ LCK + V A L EM
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ PS+ T+ LI + G+ + +++ +M + G+ D ++ +C + +A
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAV 494
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
A+L K + + YN++ + + E GD + L ++ G + + +T ++ L
Sbjct: 495 AILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGL 554
Query: 601 WK 602
+
Sbjct: 555 CR 556
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 16/305 (5%)
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
LP L + L+ L G+ + F +V G PD ++N ++ A G + + +
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 367 LLYEM--MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
++ M PD F+ +++ G + G+ AL + E+ GV + Y+ +I
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ A L +++ DG P++ YN L+ LC+ + + +L DEM ++ P
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 485 LSTYRALICCFCGIGRSGEA---VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
TY L F G+ R+GE+ +SL E L+ G++ + C +L+NG C + V KAE
Sbjct: 299 GFTYSIL---FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQ 355
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM----ELQKRFLRLGFAPNNLTCKYMI 597
+L + T YN + N + + DL +++ R +R P+++T +I
Sbjct: 356 VLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIR----PDHITYNALI 411
Query: 598 HSLWK 602
+ L K
Sbjct: 412 NGLCK 416
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 102 CQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
CQ D A F +K+ I+P Y +++ L + A ++ E+ + D
Sbjct: 380 CQVRDLRGAFCIFEQMKSR-HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD-- 436
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
SV+ F LI AY G + + F G + ++S ++ K
Sbjct: 437 PSVETFNTLID-------AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 489
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + + ++M + PN +N + + ++GD ++ +EK++ G +VTYN
Sbjct: 490 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 549
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ C+ ++++A L + + + PD+V+Y T+++ C +G +A +L M G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ P + +Y+TL+ A G++ + + L +M+ + P + I+V Y
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 659
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IK ++ +V N K A+ +L +++ KD + V+ +I AY+
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMI--YKDVAPNAQVYNSIID-------AYI 520
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++F K + G SIV+ N LL GL + + ID+ ++ + G+ P+
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++N + C GD DK L+++ + G P L TY+TL+S+ GR++D LY+ M
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+NV P Y +++ + + L M +G++ D
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 192/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + A K L ++V K + VF+ ++
Sbjct: 10 RHTLHSYCTMIHFLCTHQMLPEA-KNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G + ++ + FR T + F +C +L +KL W Y+E+
Sbjct: 69 FSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEIL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ ++I + G P +V++NTL++ Y + G L+
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ + PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G + + EM+ G PD T ++ G KEG L A +L+ E+ G+
Sbjct: 249 DGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ A +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 161/363 (44%), Gaps = 7/363 (1%)
Query: 244 NILTHVFCKNGDVDKVNGFLEKI-EEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
N++ V + G D + E I E +G D+ ++ LI++Y + G L+DA +R+
Sbjct: 34 NLIQIVVSRKGK-DSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLT 92
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
T ++ K + + ++ G + +N L+ +CKEG+M
Sbjct: 93 REHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEM 152
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
+ ++S+ E+ G+ P + ++ GY + G L L + G I D+Y Y
Sbjct: 153 RLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH--GSGIQPDVYTYS 210
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC++++ A L + + +G VP+ + L++ CK S+ A+ EM+ +
Sbjct: 211 VLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQ 270
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P L TY LI C G +A L+DEM G+ PD LI+G C E D+ A
Sbjct: 271 GFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
K+ D +Y A+ + +G ++ + L +G P+N T +I+
Sbjct: 331 FKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINE 390
Query: 600 LWK 602
K
Sbjct: 391 FCK 393
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
I+P Y ++++ L +K + A ++ E++ LV P+ V F LI
Sbjct: 202 IQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G I + + +++ L GF P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++G+ A + R
Sbjct: 311 KITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + PD TYT ++N CK+G V+ +L M G P +V+
Sbjct: 371 EMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 127/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R D+ ++ L
Sbjct: 13 LHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G + ++ + + TC+ +++ + K S E+ G
Sbjct: 73 ITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ C++ A S+ + I + G PS+ +N LM + + +
Sbjct: 133 PASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK M I+P + TY LI C + +A L DEM+ +G++P+ LI+G+C
Sbjct: 193 LKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHC 252
Query: 532 MEKDVNKA-EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
++ A EA + F D +YN + ++GDL + +L G P+
Sbjct: 253 KTGSIDLAMEAYKEMLRQGFSP-DLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 223/505 (44%), Gaps = 30/505 (5%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D +AL FF WV + T++++ ++ +LA + P + D
Sbjct: 69 DPATALAFFEWVARRPGFRHTAASHAALLQLLA------------------RRRAPANYD 110
Query: 165 -VFQDLISCT---EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ +ISC+ ED A + IR + + P N L LL+ +
Sbjct: 111 KLVVSMISCSGTAEDMREAVDAIQAIRRAGGK-----RLALSPKCY--NLALRSLLRFDM 163
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ ++Y ++ + G+ P+T T+N + +CK G + + + + E G + D T N
Sbjct: 164 TEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNA 223
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ YC+ G L A +L +M + +YT L+ GLC+ VREA L M+ G
Sbjct: 224 LLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDG 283
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
SP++ +Y LI CKEG++ +++ LL EM G+ P +T ++ GY K GRL AL
Sbjct: 284 CSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDAL 343
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+ ++ G + Y+ LI LC +P A LL G+ P++ + ++
Sbjct: 344 GIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGY 402
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK + + DAL +K M+ K L Y LI R EA ++E+ +G+ P+
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
I +I+ YC V A + + + +Y+++ +D L K M L +
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGME 605
G P +T +I K E
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHE 547
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 195/423 (46%), Gaps = 59/423 (13%)
Query: 178 WAYVKV--GLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
W Y + GLI++ + K + G P +++ L+ G K + D ++++E
Sbjct: 498 WTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 557
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDK--------------------VNGF-------- 262
M + G+ P+ +N+LT CK+G ++ V+GF
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEF 617
Query: 263 ----LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+EK+ EG D TY+ L+ + CK+ +LN+A + M R V ++V YT +++
Sbjct: 618 AAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIIS 677
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
+ KEGK A +F+ M+ G P ++Y I +YCK G+++E+ L+ EM NG+ P
Sbjct: 678 EMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAP 737
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI-----VALCQDNRPFA 433
D T + + G G G + A + + + S + + Y + + + N +
Sbjct: 738 DVVTYNVFINGCGHMGYMDCAFSTLKRM--IDASCEPNYWTYWLLLKHFLKMSLANAHYV 795
Query: 434 ATS-------------LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
TS LLER+ + G P+ Y+ ++ CK + +A +L D M+ ++
Sbjct: 796 DTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKD 855
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P+ Y LI C C I +A S + M+E G P + LI G C E D +KA+
Sbjct: 856 ISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAK 915
Query: 541 ALL 543
AL
Sbjct: 916 ALF 918
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 193/428 (45%), Gaps = 10/428 (2%)
Query: 171 SCTEDCNWAYVKV------GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
C D +W Y + G E+ + + GF P++++ ++NG K ID
Sbjct: 353 GCNPD-DWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDA 411
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+V M + + +L V K + + L +I G P++V Y ++I +
Sbjct: 412 LRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDA 471
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YCK G++ A ++++ P+ TY++L+ GL ++ K+ +A L +M G++P
Sbjct: 472 YCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPG 531
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+++Y TLI CK+ + + L M NG+ PD ++ K GR A + +V
Sbjct: 532 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV 591
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ GV +++ Y L+ + A +L+E++ +G Y+ L+++LCK
Sbjct: 592 ---KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQK 648
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +AL + D+M R +K ++ Y +I G+ A S+ +EM+ SG P +
Sbjct: 649 KLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYT 708
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
V I+ YC + +A L+G + D +YN N G + KR +
Sbjct: 709 VFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDA 768
Query: 585 GFAPNNLT 592
PN T
Sbjct: 769 SCEPNYWT 776
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 187/403 (46%), Gaps = 4/403 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G PS+ + N +++G K + + M G P+ T+N L H C G D+
Sbjct: 318 GVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEA 376
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L GF P ++T+ +I+ YCK +++DA + IM DL Y L++
Sbjct: 377 EELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISV 436
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L K+ +++EA + + GLSP++V Y ++I AYCK GK+ + + G P+
Sbjct: 437 LIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPN 496
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T ++ G ++ +L A+ L+ ++Q G++ Y LI C+ + A L E
Sbjct: 497 AWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 556
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q+G P + YN L ++LCK +A +V + + + TY +L+ F G
Sbjct: 557 MMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVKKGVVLTKVTYTSLVDGFSKAG 613
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ A +L+++M+ G DS VL+ C +K +N+A ++L + + +Y
Sbjct: 614 NTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYT 673
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + ++G + + G P+ +T I S K
Sbjct: 674 IIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCK 716
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 135/326 (41%), Gaps = 48/326 (14%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELV----------------ELVKDCPH--SVD 164
K S Y +++ L K + A+ +L ++ E++K+ H +
Sbjct: 631 KADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKS 690
Query: 165 VFQDLISCTEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+F ++IS + +Y K+G I E+ + G P +V+ N +NG
Sbjct: 691 MFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCG 750
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG----------------DVDKVN 260
+ +D + + M PN T+ +L F K +D V
Sbjct: 751 HMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVW 810
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
LE++ + G +P VTY+++I+ +CK RL +A L M +++ P+ YT L+
Sbjct: 811 QLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCC 870
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C +A M+ G P + SY+ LI C EG ++K+L +++ +
Sbjct: 871 CDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNE 930
Query: 381 FTCQIIVQGYGKEG------RLLSAL 400
+I+ G K G +LLSA+
Sbjct: 931 VAWKILNDGLLKAGHVDICSQLLSAM 956
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W ++K+ + ++ + + G P+ V+ + ++ G K +++ + + M I
Sbjct: 801 WNWIKLDTV---WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDIS 857
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN + +L C +K F+ + E GF P L +Y+ LI+ C +G + A L
Sbjct: 858 PNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKAL 917
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + + + V + L +GL K G V QL M +R D +Y+ + +
Sbjct: 918 FCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHE 977
Query: 358 EGKMQES 364
M ES
Sbjct: 978 ASGMYES 984
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G LN
Sbjct: 129 ECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+VK G IR + F G +PS+VS N L+NG +KL +++ +++ M G+ P
Sbjct: 145 GFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M+ +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYKPSV 416
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ + KEG+++ ++S+ + G+ P + ++ GY K
Sbjct: 125 EENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLNEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA +L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L + G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM K + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 179/348 (51%), Gaps = 3/348 (0%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + G++P +V+ + L+NG + N + + +M +G P+ +N + CK G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V+ +++E +G D VTYN+L++ C GR +DA L R M R+++P+++T+T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+++ KEGK EA +L+ M R + PD+ +YN+LI C G++ E+K +L M+
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G PD T ++ G+ K R+ L E+ + G+ Y+ +I Q RP AA
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ R+ P++ Y+ L+ LC V AL+L + M I+ ++TY +I
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
C IG +A L + G+ PD +I+G+C ++ +K++ L
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 189/415 (45%), Gaps = 3/415 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E F K + PSIV + +L+ + K D ++ M GI + +++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + C+ + K+ + G++PD+VT ++LI+ +C+ R+ DA L M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+V Y T+++G CK G V +A +LF RM G+ D V+YN+L+ C G+ ++
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L+ +M+ I P+ T ++ + KEG+ A+ L E+ R V Y+ LI L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C R A +L+ + G +P + YN L+ CK V + L EM R +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +I + GR A + M P+ + +L+ G CM V KA L
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +YN V + + G++ +L + G P+ ++ MI
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 41/368 (11%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ F+ + K+ + D V +E G DL +YN +I+ C+ R A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + PD+VT ++L+NG C+ +V +A L +M G PD+V YNT+I CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++ L M +G+ D T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVT----------------------------------- 211
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ LC R A L+ + VP++ + +++ K ++A+ L +EM
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R + P + TY +LI C GR EA ++D M+ G LPD LING+C K V+
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ L A++ + DT +YN + + + G E+ F R+ PN T ++
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILL 388
Query: 598 HSL---WK 602
+ L W+
Sbjct: 389 YGLCMNWR 396
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L + L+ M + LP +V ++ +++ + K LFH M G+ D+ SYN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I C+ + + S++ +MM G PD T ++ G+ + R+ A++LV +++ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
IY+ +I C+ A L +R+ +DG YN L+ LC +DA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L +MV R+I P++ T+ A+I F G+ EA+ L +EM + PD LING
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
CM V++A+ +L K + D +YN + N F + + + +L + + G +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 591 LTCKYMIHSLWKG 603
+T +I ++
Sbjct: 350 ITYNTIIQGYFQA 362
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+I P + ++ + KFS AMK+ E+ D V + LI+
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLIN-------GL 289
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G + E+ + + G P +V+ N L+NG K +D+ +++ EM + G+ +T
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N + + + G D +++ P++ TY+ L+ C R+ A L+
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + D+ TY +++G+CK G V +A LF + +GL PD+VSY T+I +C++ +
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 361 MQESKSLLYEMMGNGIYP 378
+S L +M +G+ P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 203/422 (48%), Gaps = 1/422 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + ++ + +K L+ G P V N ++NG ++ I++ + E+M +G+ P
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L FC+ ++++ ++K+ E+G P++ TYNTLI Y + + F +
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + P++++Y L+N LCK+ + EA + MVHRG+ P+ YN LI C
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK++++ EM+ I P T I++ G K+G+++ A NL E+ R G+S Y
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI A L E + + G P+L Y+ L+ C + + + EM+
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQ 664
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
N+ P Y ALI C+ G +A SL M G+ PD LI G+ E ++K
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHK 724
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ L+ + I TE+Y+ + + D + GF P+ C +I
Sbjct: 725 VKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLIT 784
Query: 599 SL 600
L
Sbjct: 785 GL 786
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 208/458 (45%), Gaps = 34/458 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + E+F + +P+I++ N LLNGL + +++ +V EEM G P
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L K G+VD E+ +G T + L+++ CK+G + A +
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVL 380
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + P V + T++NG C+ G + +A+ +M GL P+ V+YN+L+ +C+
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+E++ + +M+ G+ P+ T ++ GYG+ ++ E+++ G+ + Y
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISY 500
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+D A +L + G VP+ +IYN L++ C + DA DEMV
Sbjct: 501 GCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVA 560
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I P+L TY LI C G+ EA +L E+ G+ D LI+GY +V K
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQK 620
Query: 539 AEAL---------------------------LGFFAKKFQ-------IYDTESYNAVFNM 564
A L L K +Q + D YNA+ +
Sbjct: 621 ALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHC 680
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ E GD+ K L G P+ +T +I +K
Sbjct: 681 YVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 173/357 (48%), Gaps = 1/357 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ K +K ++ G P++ + N L++G + D+C+Q+ EEM + G+ PN ++
Sbjct: 443 MEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGC 502
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + CK+ ++ + L + G P+ YN LI C G+L DAF + M R
Sbjct: 503 LINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE 562
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
++P LVTY L+NGLCK+GKV EA L + +GLS D+++YN+LI Y G +Q++
Sbjct: 563 IVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKAL 622
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L M +GI P T ++ G GKEG +L + E+ + + R IY+ LI
Sbjct: 623 ELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVE-KIYQEMLQMNLVPDRVIYNALIHCY 681
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ A SL + G P YN L+ K + L ++M R + P
Sbjct: 682 VEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKT 741
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY LI C + A EM E+G P IC LI G E + A+ +
Sbjct: 742 ETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVI 798
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 192/405 (47%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ ES + + G PS+ S N L L+ + Q++ E+ G+ P+ +
Sbjct: 127 MVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYG 186
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
K GD+ + + ++ G P + YN +I CK+ R+ DA L+ M R
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
V P+ +TY TL++G CK G++ EA + RM + P I+++N+L+ C+ M+E+
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ +L EM G PD FT + G+ K G + +++ L E R GV I L+ A
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC++ A +L++ ++G P +N ++ C+ + A ++M ++P+
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
TY +L+ FC + EA + +M+E G+LP+ + LI+GY ++ +L
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
KK + SY + N +D ++ + + + G PN
Sbjct: 487 EMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 207/446 (46%), Gaps = 35/446 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A VK+G ++ + + G P + N ++ GL K + ++++EM + P
Sbjct: 191 AAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAP 250
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L +CK G +++ E+++ E +P ++T+N+L++ C+ + +A +
Sbjct: 251 NRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVL 310
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +PD TYTTL +G K G V + L V +G+ + + L+ A CKE
Sbjct: 311 EEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKE 370
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G M++++ +L + + NG+ P IV GY + G + A + +++ G+ + Y
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES------------------- 459
+ L+ C+ A ++++ + G +P++E YN L++
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490
Query: 460 ----------------LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
LCK ++ +A ++ +MV R + P+ Y LI C G+ +
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKD 550
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A DEM+ ++P +LING C + V +AE L +K +D +YN++ +
Sbjct: 551 AFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLIS 610
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPN 589
++ G++ K +EL + + G P
Sbjct: 611 GYSSAGNVQKALELYETMKKSGIKPT 636
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 3/331 (0%)
Query: 278 YNTLISSYCKKGRL-NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++ ++ S C + ++ +++ LY +M + VLP + + + L + + QLF +
Sbjct: 114 FSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEI 173
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V GL PD Y I A K G ++ + L+ M G+ P F +++ G KE R+
Sbjct: 174 VESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRM 233
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L E+ V+ +R Y+ LI C+ + A ++ ER+ + P++ +N L
Sbjct: 234 KDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSL 293
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ + +A + +EM P TY L G +++L +E + G+
Sbjct: 294 LNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
C +L+N C E ++ KAE +L F + +N + N + + GD++K
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSL--WKGME 605
++ +G PN++T ++ K ME
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKFCEMKNME 444
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 11/267 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A FF+ + EI PT Y ++++ L K A + E+ K V +
Sbjct: 551 AFRFFDEMVAR-EIVPTLVTYNILINGLCKKGKVMEAENLASEITR--KGLSFDVITYNS 607
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LIS Y G ++++ + + G +P++ + + L+ G K + ++Y
Sbjct: 608 LIS-------GYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIY 659
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+EM ++ + P+ +N L H + ++GDV K +E +G PD +TYN LI + K+
Sbjct: 660 QEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKE 719
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
GR++ L M R ++P TY L+ G CK A+ + M G +P +
Sbjct: 720 GRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSIC 779
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNG 375
+ LI +EG+ ++ + EM G
Sbjct: 780 DNLITGLREEGRSHDADVICSEMNMKG 806
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 187/394 (47%), Gaps = 3/394 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS S N LL GL+ +D + + R + P+ +TFN + C+ G + K
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY---LYRIMYRRNVLPDLVTYTTLMN 318
+ I+ G P + TYN+LI YCKKG + ++ L + M + P VT+ L+N
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK A ++F M +G++ +V+YN+LI C EGK++E L+ EM G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T +++G+ K+G + A + + + V IY LI + + A ++
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + + G P++ YN L+ + A L DEM ++ I+ + TY LI C
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G +AV L+DEM E G+ P+ +I G+C + ++ A + K + + +Y
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
N F + G + + +L L PN +T
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 176/356 (49%), Gaps = 4/356 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV---YEEMGRIGICP 238
++G +R++ + G PS+ + N L++G K + V +EM GI P
Sbjct: 203 RIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISP 262
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
TF +L + +CKN + E+++++G +VTYN+LIS C +G++ + L
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ +T+ ++ G CK+G + +A+ M R + PD+V Y LI Y +
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRL 382
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM+++ ++ M GI P+ T ++ G+ + G SA L+ E++ G+ Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI ALC A LL+ + + G P+ YN +++ C ++ A ++ M
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ ++ TY I FC IG+ EA L++EML+ ++P+ + G MEK
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM-MEK 557
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 182/382 (47%), Gaps = 3/382 (0%)
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
K FR L P I + N +++GL ++ + + V +++ G+ P+ T+N L +
Sbjct: 177 KAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGY 236
Query: 251 CKNGDVDK---VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK G V+ L+++ E G P VT+ LI+ YCK A ++ M ++ +
Sbjct: 237 CKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIA 296
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
+VTY +L++GLC EGKV E +L M GLSP+ +++ ++ +CK+G M ++
Sbjct: 297 ASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDW 356
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ M + PD I++ GY + G++ A+ + + + G+S + Y+ LI +
Sbjct: 357 IDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSR 416
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+A+ LL+ + + G + YN L+ +LC V A+ L DEM + ++P+ T
Sbjct: 417 SGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I FC G A + M + + V I +C +++A LL
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536
Query: 548 KKFQIYDTESYNAVFNMFAEDG 569
K + + +Y + E G
Sbjct: 537 DKCLVPNGITYETIKEGMMEKG 558
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 164/330 (49%), Gaps = 3/330 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P + N L++ R++ A +R RR V PD+ T+ T+++GLC+ G++R+A +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEG---KMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ GL+P + +YN+LI YCK+G M LL EM+ GI P T +++ G
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y K +A+ + E+++ G++ S Y+ LI LC + + L+E + G P+
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ +++ CK +ADA D M +RN++P + Y LI + +G+ +A+++ +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M + G+ P+ LI G+ D A LL +K D +YN + G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ K ++L +G PN+LT +I
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQG 483
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G++ ++ + +P +V L++G +L ++ V E M + GI P
Sbjct: 343 GFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISP 402
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L F ++GD +G L++++E+G + D+VTYN LI + C KG + A L
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ +TY T++ G C +G ++ A+++ RM ++V+YN I +C+
Sbjct: 463 DEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI 522
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
GKM E+ LL EM+ + P+ T + I +G ++G
Sbjct: 523 GKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ K + +VG +P+ ++ N ++ G I +++ M + N T+
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
N+ FC+ G +D+ N L ++ ++ P+ +TY T+ +KG D
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPD 562
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 196/412 (47%), Gaps = 5/412 (1%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
F L G P++ + ++ L N +D + +M + G PN+ + L H
Sbjct: 205 VFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALS 264
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
+ V + LE++ G PD+ T+N +I CK +++DA L M R PD +
Sbjct: 265 QKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNM 324
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY L++GLC+ GK+ EA ++ ++ P+ NTLI Y G+++E++S L E
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNTLINGYVMSGQLKEAQSFLNET 380
Query: 372 MGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M N G PD FT I++ G KEG L A +LV E+ R G + Y L+ LC+
Sbjct: 381 MINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGL 440
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A +L + G + IYN L+ +LC+ + V AL L EM + KP L TY +
Sbjct: 441 LEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNS 500
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C + R EA L ML G + ++ LI+ KA L+ +
Sbjct: 501 LIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRG 560
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D +YN + F + G++ K +EL ++ + G + ++C MI+ L K
Sbjct: 561 CTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCK 612
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 226/505 (44%), Gaps = 47/505 (9%)
Query: 123 KPTSSNYCLIVHILAWNN----------------------KFSFAMKMLCELVELVKDC- 159
+PT +Y L++ IL N F MK LC E+ C
Sbjct: 180 EPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACS 239
Query: 160 -----------PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
P+S+ V+Q LI N + E+ K + +G P + +
Sbjct: 240 LLRDMTKHGCVPNSI-VYQTLIHALSQKNQ-------VSEALKLLEEMFVMGCMPDVQTF 291
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +++GL K+N I ++ + M G P+ T+ L H C+ G +++ L KI
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP- 350
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
P+ NTLI+ Y G+L +A +L M PD+ TY LM+GLCKEG +
Sbjct: 351 ---CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLS 407
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A L + M RG P++++Y L+ CK G ++E+ +L+EM G+ ++ ++
Sbjct: 408 FARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLI 467
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
++ ++ ALNL+ E+ G Y+ LI LC+ +R A L + DG V
Sbjct: 468 CALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAV 527
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ YN L+ +L + + AL L ++M+ R TY LI FC +G + + L
Sbjct: 528 ANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLEL 587
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
++M+ G+ D+ C ++ING C V+ A L + + D +YN+V N +
Sbjct: 588 YEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCK 647
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLT 592
G + + + L R G P+ T
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFT 672
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 199/416 (47%), Gaps = 16/416 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++H L K + A K+L ++ CP++ + LI+ YV
Sbjct: 321 PDNMTYGFLLHGLCRIGKLNEARKILIKI-----PCPNNA-ILNTLIN-------GYVMS 367
Query: 184 GLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G ++E+ +T+ + GFQP I + N L++GL K + + EM R G PN T
Sbjct: 368 GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVIT 427
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL + CK G +++ L ++ G + V YN LI + C+K +++ A L M
Sbjct: 428 YAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMC 487
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PDL TY +L+ GLCK ++ EA +LFH M+ G + V+YNTLI A + G Q
Sbjct: 488 TKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQ 547
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +L+ +M+ G D T +++ + K G + L L ++ G+ + +I
Sbjct: 548 KALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMI 607
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ + A L G+VP + YN ++ LCK + +AL L D + ++
Sbjct: 608 NGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVR 667
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P TY I C G +A +E+G +P + VL+ Y + K N+
Sbjct: 668 PDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLV--YTLLKQSNQ 721
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 9/368 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +F N + +P Y +++H L SFA ++ E+ + C +V +
Sbjct: 373 AQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSR--RGCEPNVITYAI 430
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ K GL+ E+ + G + V N L+ L + + +
Sbjct: 431 LVN-------GLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
EM G P+ T+N L + CK +D+ + +G + VTYNTLI + ++
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G A L M R D +TY L+ CK G + + +L+ +M+ GL D +S
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I CK GK+ + L + + G PD T ++ G K GR+ ALNL LQ
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GV Y+ I C++ A R ++G+VPS +N L+ +L K + +
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723
Query: 469 ALLLKDEM 476
+ DE+
Sbjct: 724 NFFVLDEL 731
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 41/281 (14%)
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF--------- 409
GK + LL +M GI II++ YGK G+ A+ L+++++
Sbjct: 126 GKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKS 185
Query: 410 ---------------------------GVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
GVS + + ++ ALC N +A SLL +
Sbjct: 186 YDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMT 245
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G VP+ +Y L+ +L + + V++AL L +EM P + T+ +I C + +
Sbjct: 246 KHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH 305
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L+D ML G PD+ L++G C +N+A +L K + N +
Sbjct: 306 DATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKIPCPNNAILNTLI 361
Query: 563 NMFAEDGDLSKLME-LQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + G L + L + + GF P+ T ++H L K
Sbjct: 362 NGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCK 402
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 231/492 (46%), Gaps = 13/492 (2%)
Query: 120 LEIKPTSS----NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
L KPTSS N L + + NN + A+ L +E P + F LI+C
Sbjct: 58 LRTKPTSSIIEFNKILGSLVKSNNNHYPTAIS-LSRRLEFHGITP-DIFTFNILINC--- 112
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
Y + + +F K L +G++P ++ N L+ GL + + ++ + +G
Sbjct: 113 ----YCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALG 168
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ ++ L + CK G+ L KI+ + ++V YNT+I S CK + DA+
Sbjct: 169 FHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAY 228
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
LY M + + PD+VT++ L+ G C G++ EA LF MV + ++PD ++N L+ A
Sbjct: 229 ELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDAL 288
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CKEG ++ +K++L MM G+ P+ T ++ GY ++ A +++ + + G + +
Sbjct: 289 CKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNA 348
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y +I C+ A SL + G P YN L++ LCK ++ A L DE
Sbjct: 349 HSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDE 408
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M D ++ TY LI C +A++L+ ++ + G+ PD +LI G C
Sbjct: 409 MHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGR 468
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ A+ + K + +YN + N ++G + L + G P+ +T +
Sbjct: 469 LKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYET 528
Query: 596 MIHSLWKGMERK 607
+I +L+ E +
Sbjct: 529 LIQALFHKDENE 540
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 205/405 (50%), Gaps = 7/405 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + + RK + ++V N +++ L K + +++Y +M I P+
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF+ L + FC G +++ G ++ + +PD T+N L+ + CK+G L A + +M
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V+P++VTY++LM+G C +V +A + + + G +P+ SY T+I +CK +
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ SL +M GI PD T ++ G K GR+ A LV E+ G + Y+ L
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCL 424
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+++ A +L+++I G P + +N L+ LCK + +A + +++ +
Sbjct: 425 IDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGY 484
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY ++ C G EA +L+ +M ++G++PD+ LI + + KAE
Sbjct: 485 SVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEK 544
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
LL + +Y E V ++ +E D Q++F + G+
Sbjct: 545 LLREMIARDVVYALEGLEMVLHLESEAKD-------QEKFGKKGY 582
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 159/308 (51%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ + VG + E+F FR+ + P + N L++ L K + + M + G+
Sbjct: 251 YGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVM 310
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T++ L +C V+K L I + G P+ +Y T+I+ +CK +++A L
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M + + PD VTY +L++GLCK G++ A +L M G +I +YN LI A CK
Sbjct: 371 FNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCK 430
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ ++ +L+ ++ GI PD +T I++ G K GRL +A ++ +L G S++
Sbjct: 431 NHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWT 490
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ ++ LC++ A +LL ++ +G +P Y L+++L D A L EM+
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Query: 478 DRNIKPSL 485
R++ +L
Sbjct: 551 ARDVVYAL 558
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 195/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H FCK G++ + I + G P +V++NTL++ Y K G LN
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A + + ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +K + TY +I FC G LM EM G +P
Sbjct: 369 LREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ K G IR + F G +PS+VS N L+NG +KL +++ +++ M G+ P
Sbjct: 145 SFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ + Y
Sbjct: 325 GDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + L++ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLMKEMQRDGYVPSV 416
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 149/354 (42%), Gaps = 35/354 (9%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR----------RNVLPDLVT----------- 312
D+ ++ LI++Y + G L DA R+ R VL L+
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 313 --------------YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ LM+ CKEG++R A +F + GL P +VS+NTL+ Y K
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E L M +G+ PD +T +++ G KE ++ A L E+ G+ + +
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C++ R A + +++ P L YN L+ LCK + A L DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +KP TY LI C G A M++ + D LI+G C E
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE +L + +Y + N F + GD+ +L K R G+ P+ +T
Sbjct: 365 AEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 35/190 (18%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + LD G P+ V+ L++G K +D ++Y++M + P+ T+N L + CK
Sbjct: 229 FDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV- 311
GD+ + ++++ +G PD +TY TLI CK+G L AF +IM + N+ D V
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVA 348
Query: 312 ----------------------------------TYTTLMNGLCKEGKVREAHQLFHRMV 337
TYT ++N CK+G V +L M
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 338 HRGLSPDIVS 347
G P +V+
Sbjct: 409 RDGYVPSVVT 418
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 124/306 (40%), Gaps = 18/306 (5%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I AY + G ++++ + TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGY 132
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
S ++ L+ + C++ A S+ + I + G PS+ +N LM K + +
Sbjct: 133 PASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFR 192
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
V+ A + + D +YN + + GDL + +L G P+ +
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 592 TCKYMI 597
T +I
Sbjct: 313 TYTTLI 318
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S CK + A + D + ++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 211/422 (50%), Gaps = 2/422 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E F L G + +V + +++ +++ + + +VY M + GI PN
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL + C+NG V + G +I ++G +P ++TY++LI +CK L D F LY IM
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ +PD+V + L+NGL ++G + EA + F + V RGL+ + +N LI C K
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG-CFRLKR 500
Query: 362 QESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+Y +MG + PD T ++V+G ++GRL AL L +L + G S IY
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ P + + + +G P + IYN L+ + V + L L E++
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P + TY +IC +C + +A+ L + + P++ +LI+ YC + ++ A
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAM 680
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ ++ + +Y+ + + + + + EL ++ L +PN ++ +I L
Sbjct: 681 LIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740
Query: 601 WK 602
K
Sbjct: 741 CK 742
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 246/534 (46%), Gaps = 34/534 (6%)
Query: 87 LPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAM 146
LP+L + V+ + +S+ SAL FF W +N L + ++C I H+L + F A
Sbjct: 50 LPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPAT 109
Query: 147 KMLCELV------ELVKDCPHSV--------DVFQDLISCTEDCNWAYVKVGLIRESFKT 192
++ +V E++ + S V+ L+ C Y + G++ + T
Sbjct: 110 RVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHC-------YCRNGMVDRAVDT 162
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F +G S + + +L+ L+ + ID + YEEM C + + + F K
Sbjct: 163 FAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGVYEFVFNSFLK 217
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G+V+K F + E G P +V N ++ C ++ A + +M R P+LVT
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
++TL+N CKE ++ EA L++ M+ +G+ PD+V Y+ LI + GK++E SL +
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ D I+ Y + G L A+ + + + G+S + Y LI LC++ R
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + +I + G PS+ Y+ L++ CK +++ D L M+ + P + LI
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME----KDVNKAEALLGFFAK 548
G EA+ + ++ G+ ++ + LI+G C +D K L+G +
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG-CFRLKRTRDGLKMYILMGMYK- 515
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
I D +Y + AE G L + + L + L+ GF+P+++ +I K
Sbjct: 516 --VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 211/451 (46%), Gaps = 35/451 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+VG + ++ + + + L G P++V+ + L+NGL + + + V+ ++ + G+ P
Sbjct: 354 AYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG--------- 289
+ T++ L FCK+ ++ G + +G PD+V + LI+ ++G
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473
Query: 290 --------------------------RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
R D +Y +M V+PD+VTYT L+ GL ++
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G++ EA LF +++ +G SPD + Y TLI +CK+ + M NGI+PD
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++ + +EG + + L L+ E+ ++G+ Y+ +I C A L E +
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P+ + L+++ CK + DA+L+ M++R +P++ TY LI + +
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L ++ML + P+ +LI+G C + + +A + + D +Y +
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+ + G L++ M L L G P++L K
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPDDLLQK 804
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 172/359 (47%), Gaps = 1/359 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++ C+ N + G++ E+ + F + + G + N L++G +L ++
Sbjct: 449 DVVVCSMLIN-GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKM 507
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
Y MG + P+ T+ +L + G +D+ ++ ++GF PD + Y TLI +CK
Sbjct: 508 YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
K ++++M + PD+ Y L+N +EG V +L ++ GL PDIV+
Sbjct: 568 KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVT 627
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNT+I YC ++ L + P+ T I++ Y K+GR+ A+ + +
Sbjct: 628 YNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSML 687
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + Y LI + +A L E++ D P++ Y+ L++ LCK +
Sbjct: 688 ERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L + R++ P + Y LI +C +GR EA+ L D ML +G++PD + + L
Sbjct: 748 EASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMP 414
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 150/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DG +PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGCMPSV 416
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 211/422 (50%), Gaps = 2/422 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + E F L G + +V + +++ +++ + + +VY M + GI PN
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL + C+NG V + G +I ++G +P ++TY++LI +CK L D F LY IM
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ +PD+V + L+NGL ++G + EA + F + V RGL+ + +N LI C K
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG-CFRLKR 500
Query: 362 QESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+Y +MG + PD T ++V+G ++GRL AL L +L + G S IY
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ P + + + +G P + IYN L+ + V + L L E++
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYG 620
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P + TY +IC +C + +A+ L + + P++ +LI+ YC + ++ A
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAM 680
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ ++ + +Y+ + + + + + EL ++ L +PN ++ +I L
Sbjct: 681 LIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740
Query: 601 WK 602
K
Sbjct: 741 CK 742
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 243/523 (46%), Gaps = 34/523 (6%)
Query: 87 LPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAM 146
LP+L + V+ + +S+ SAL FF W +N L + ++C I H+L + F A
Sbjct: 50 LPNLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPAT 109
Query: 147 KMLCELV------ELVKDCPHSV--------DVFQDLISCTEDCNWAYVKVGLIRESFKT 192
++ +V E++ + S V+ L+ C Y + G++ + T
Sbjct: 110 RVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTVYSFLLHC-------YCRNGMVDRAVDT 162
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F +G S + + +L+ L+ + ID + YEEM C + + + F K
Sbjct: 163 FAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEM-----CKGLGVYEFVFNSFLK 217
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G+V+K F + E G P +V N ++ C ++ A + +M R P+LVT
Sbjct: 218 RGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVT 277
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
++TL+N CKE ++ EA L++ M+ +G+ PD+V Y+ LI + GK++E SL +
Sbjct: 278 FSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMAL 337
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ D I+ Y + G L A+ + + + G+S + Y LI LC++ R
Sbjct: 338 ARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVL 397
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + +I + G PS+ Y+ L++ CK +++ D L M+ + P + LI
Sbjct: 398 EACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI 457
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME----KDVNKAEALLGFFAK 548
G EA+ + ++ G+ ++ + LI+G C +D K L+G +
Sbjct: 458 NGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG-CFRLKRTRDGLKMYILMGMYK- 515
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
I D +Y + AE G L + + L + L+ GF+P+++
Sbjct: 516 --VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 212/453 (46%), Gaps = 35/453 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV+VG + ++ + + + L G P++V+ + L+NGL + + + V+ ++ + G+ P
Sbjct: 354 AYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEP 413
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG--------- 289
+ T++ L FCK+ ++ G + +G PD+V + LI+ ++G
Sbjct: 414 SVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473
Query: 290 --------------------------RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
R D +Y +M V+PD+VTYT L+ GL ++
Sbjct: 474 FQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQ 533
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G++ EA LF +++ +G SPD + Y TLI +CK+ + M NGI+PD
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++ + +EG + + L L+ E+ ++G+ Y+ +I C A L E +
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKC 653
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P+ + L+++ CK + DA+L+ M++R +P++ TY LI + +
Sbjct: 654 GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTES 713
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L ++ML + P+ +LI+G C + + +A + + D +Y +
Sbjct: 714 AFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIR 773
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ + G L++ M L L G P++L K +
Sbjct: 774 GYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 172/359 (47%), Gaps = 1/359 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++ C+ N + G++ E+ + F + + G + N L++G +L ++
Sbjct: 449 DVVVCSMLIN-GLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKM 507
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
Y MG + P+ T+ +L + G +D+ ++ ++GF PD + Y TLI +CK
Sbjct: 508 YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
K ++++M + PD+ Y L+N +EG V +L ++ GL PDIV+
Sbjct: 568 KRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVT 627
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNT+I YC ++ L + P+ T I++ Y K+GR+ A+ + +
Sbjct: 628 YNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSML 687
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + Y LI + +A L E++ D P++ Y+ L++ LCK +
Sbjct: 688 ERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLME 747
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L + R++ P + Y LI +C +GR EA+ L D ML +G++PD + + L
Sbjct: 748 EASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 193/404 (47%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G + ++ N ++N L +L + + V M ++G+ P T L + C G+V +
Sbjct: 106 LGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQ 165
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
G + +E+ + D+ TY LI+ CK G A R M RN P++V Y+T+M+
Sbjct: 166 AVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMD 225
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK+G V EA L M +G+ P++V+Y LI C G+ +E+ SLL EMM G+ P
Sbjct: 226 GLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRP 285
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D I+V + KEG+++ A +++ + G Y+ LI C N+ A +
Sbjct: 286 DLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVF 345
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ G +P + ++ L+ CK ++ A+ L +EM P ++T+ LI FC
Sbjct: 346 HLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQA 405
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
GR A L M + G +P+ Q C V+++G C E +++A +L K + Y
Sbjct: 406 GRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIY 465
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G L+ EL G N MI L K
Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCK 509
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 208/454 (45%), Gaps = 13/454 (2%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+ LVK S+ + D I+ N ++ L+ F +G +P++++ L+
Sbjct: 96 ISLVKHMFSSLGIEADTITLNIVIN-CLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLI 154
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
NGL + Q + + M ++ + +T+ +L + CK GD G+L K+EE +
Sbjct: 155 NGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWK 214
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P++V Y+T++ CK G +++A L M + V P+LVTY L+ GLC G+ +EA L
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSL 274
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M+ G+ PD+ N L+ A+CKEGK+ ++KS++ M+ G PD FT ++ Y
Sbjct: 275 LDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCL 334
Query: 393 EGRLLSALNLVVELQRFGVSISRD------IYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ ++ A+ + F + +SR ++ LI C+D A LLE + + G+
Sbjct: 335 QNKMNEAMRV------FHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGF 388
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
VP + + L+ C+ A L M P+L T ++ C EAVS
Sbjct: 389 VPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVS 448
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L M +S + + I +L++G C +N A L K + Y +
Sbjct: 449 LAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLC 508
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G L K +L G PNN T + L
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGL 542
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 167/347 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL+ E+ + G +P++V+ L+ GL + + +EM ++G+ P+
Sbjct: 229 KDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQ 288
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
NIL FCK G V + + + G PD+ TYN+LI YC + ++N+A ++ +M
Sbjct: 289 MLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R LPD+V +T+L++G CK+ + +A L M G PD+ ++ TLI +C+ G+
Sbjct: 349 VSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRP 408
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+K L M G P+ TC +I+ G KE L A++L +++ + ++ IY L
Sbjct: 409 LAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSIL 468
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ +C + AA L + G ++ IY +++ LCK S+ A L M +
Sbjct: 469 LDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGC 528
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P+ TY + ++ + M + G D+ +IN
Sbjct: 529 LPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIIN 575
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 191/399 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + RK + ++P++V + +++GL K + + + EM G+ PN
Sbjct: 194 KTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLV 253
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L C G + L+++ + G PDL N L+ ++CK+G++ A + M
Sbjct: 254 TYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFM 313
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TY +L++ C + K+ EA ++FH MV RG PDIV + +LI +CK+ +
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNI 373
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL EM G PD T ++ G+ + GR L+A L + + ++G + +
Sbjct: 374 NKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVI 433
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC++N A SL + + + ++ IY+ L++ +C + A L + + +
Sbjct: 434 LDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGL 493
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ ++ Y +I C G +A L+ M E+G LP++ V + G +K++ ++
Sbjct: 494 QINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIK 553
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
L K D + + N + + +K+ E R
Sbjct: 554 YLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFLFR 592
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 176/387 (45%), Gaps = 1/387 (0%)
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI-EEEGFDPDL 275
KL ID+ +++ M R+ P+ F +L + ++ + G + D
Sbjct: 53 KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADT 112
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+T N +I+ C+ + F + M++ + P ++T TTL+NGLC +G V +A L
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADH 172
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M D+ +Y LI CK G + L +M P+ I+ G K+G
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ ALNL E+ GV + Y LI LC R A SLL+ + + G P L++ N
Sbjct: 233 VSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNI 292
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+++ CK V A + M+ P + TY +LI +C + EA+ + M+ G
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
LPD + LI+G+C +K++NKA LL +K + D ++ + F + G
Sbjct: 353 RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAK 412
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL + G PN TC ++ L K
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCK 439
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 202/435 (46%), Gaps = 8/435 (1%)
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
Q LIS C W+ K+ I E+ F+ + PS+ LL +++L
Sbjct: 40 QLLISMRNLC-WSG-KLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAIS 97
Query: 227 VYEEM-GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + M +GI +T T NI+ + C+ V L + + G +P ++T TLI+
Sbjct: 98 LVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGL 157
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C +G + A L M + D+ TY L+NGLCK G A +M R P++
Sbjct: 158 CVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNV 217
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V Y+T++ CK+G + E+ +L EM G G+ P+ T ++QG GR A +L+ E
Sbjct: 218 VVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDE 277
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + G+ + + L+ A C++ + A S++ + G P + YN L+ C +
Sbjct: 278 MMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNK 337
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +A+ + MV R P + + +LI +C +A+ L++EM + G +PD
Sbjct: 338 MNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTT 397
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI G+C A+ L K Q+ + ++ + + ++ LS+ + L K
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAK-----A 452
Query: 586 FAPNNLTCKYMIHSL 600
+NL +I+S+
Sbjct: 453 MEKSNLDLNIVIYSI 467
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 1/155 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K L+ E+ + +IV + LL+G+ ++ W+++ + G+ N +
Sbjct: 439 KENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVY 498
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ I+ CK G +DK L +EE G P+ TYN + K + + IM
Sbjct: 499 IYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIM 558
Query: 302 YRRNVLPDLVTYTTLMNGL-CKEGKVREAHQLFHR 335
+ D T ++N L EG + LF +
Sbjct: 559 RDKGFSVDAATTEFIINYLSTNEGDTKIREFLFRK 593
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 198/399 (49%), Gaps = 5/399 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI N LL K +D + ++M G+ P T+TFN+L + C +G +D
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+K+ E+G +P+ ++ L+ YC+ G + L M R P+ V Y TL++ CK
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY----P 378
EGK +A +L M GLSPD+V++N I A C GK+ E+ + +M + + P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T +++ G+ KEG L A L +++ ++R+ Y+ ++ L + + A +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + G P++ YN +M+ LCK + DA +L M + P TY L+ +C
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ EA +++ EM+ G P++ C +L+ E +++AE LL +K + DT +
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAP-NNLTCKYM 596
N V + +G L K +E+ G A NL Y+
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 179/339 (52%), Gaps = 23/339 (6%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V++G + E+ ++ +D+G +P++ S N +++GL K + + M G+ P+T
Sbjct: 246 VRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDT 305
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ L H +C G V + N L ++ +G P+ T N L+ S K+GR+++A L +
Sbjct: 306 VTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQK 365
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------ 342
M + + D VT +++GLC GK+ +A ++ + M G +
Sbjct: 366 MNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDS 425
Query: 343 -----PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
PD++SY+T+I CK G++ E+K EMMG + PD+ + + + KEG++
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
SA ++ ++++ G + + Y+ LI+ L N+ F L++ + + G P + IYN ++
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
SLC+ V DA + DEM+ + I P++S++ LI FC
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC 584
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 213/482 (44%), Gaps = 62/482 (12%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + F K + G +P+ S L+ G + + ++ EM R+G PN +
Sbjct: 70 GCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVY 129
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L FCK G D ++++ ++G PD+VT+N IS+ C G++ +A ++R M
Sbjct: 130 NTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189
Query: 304 RNVL----PDLVTYTTLMNGLCKEGKVREAHQLFHR------------------------ 335
VL P+++TY ++ G CKEG + EA LF +
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIG 249
Query: 336 -----------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
MV G+ P++ SYN ++ CK G + +++ L+ M +G+ PDT T
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ GY G++ A N++ E+ R G S + + L+ +L ++ R A LL+++ +
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369
Query: 445 GYVPSLEIYNELMESLCKCDSVADAL-----------------------LLKDEMVDRNI 481
GYV N +++ LC + A+ L+ D +
Sbjct: 370 GYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKC 429
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P L +Y +I C GR GEA EM+ + PDS I V I+ +C E ++ A
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L KK ++YN++ + ++ L G +P+ ++ SL
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLC 549
Query: 602 KG 603
+G
Sbjct: 550 EG 551
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 204/460 (44%), Gaps = 61/460 (13%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP+I++ N +L G K +++ ++E+M N ++NI + G + +
Sbjct: 197 QPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQL 256
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L+++ + G +P++ +YN ++ CK G L DA L R+M VLPD VTYTTL++G C
Sbjct: 257 VLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYC 316
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
GKV EA+ + M+ G SP+ + N L+++ KEG++ E++ LL +M G DT
Sbjct: 317 HTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI-----------------------Y 418
TC I++ G G+L A+ +V + G + ++ Y
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISY 436
Query: 419 DYLIVALCQDNR-PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL------ 471
+I LC+ R A +E +G++ P IY+ + S CK ++ A
Sbjct: 437 STIISGLCKAGRVGEAKKKFIEMMGKN-LQPDSAIYDVFIHSFCKEGKISSAFRVLKDME 495
Query: 472 -----------------------------LKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
L DEM +R + P +S Y ++ C GR
Sbjct: 496 KKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVK 555
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A S++DEML+ G+ P+ +LI +C D + + + A + Y+ F
Sbjct: 556 DAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE-IALNVCGHKEALYSLTF 614
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N G++ K EL + L F N K +I L K
Sbjct: 615 NELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCK 654
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/453 (22%), Positives = 191/453 (42%), Gaps = 68/453 (15%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D+ ++P +Y +++ L N F +ML L+ S V D ++ T +
Sbjct: 263 DMGMEPNVYSYNIVMDGLCKNGVL-FDARMLMRLMT-------SSGVLPDTVTYTTLLH- 313
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y G + E+ R+ + G P+ +CN LL L K I + ++ ++M G
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVI 373
Query: 239 NTHTFNILTHVFCKNGDVDKV-------------------NGFLEKIEEEGFD----PDL 275
+T T NI+ C NG +DK N ++ +++ PDL
Sbjct: 374 DTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDL 433
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA------ 329
++Y+T+IS CK GR+ +A + M +N+ PD Y ++ CKEGK+ A
Sbjct: 434 ISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493
Query: 330 -----------------------------HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ L M RG+SPD+ YN ++ + C+ G+
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++++ S+L EM+ GI P+ + I+++ + K SA++ + E+ +Y
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDF-SAVDEIFEIALNVCGHKEALYSL 612
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L A L E + +Y +L++ LCK + + DA + +++D+
Sbjct: 613 TFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKG 672
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+++ +I G EA L ++M+E
Sbjct: 673 YWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 57/155 (36%), Gaps = 35/155 (22%)
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
PS+ +YN L+ S K V L +MV + P T+ LI C G +A L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D+M E G P+ +L+ GYC
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYC-----------------------------------R 103
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G SK +EL RLGF+PN + +I S K
Sbjct: 104 AGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 199/399 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ +++ K +++ +++EM + GI P+ T++ + H CK + K F
Sbjct: 221 PDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAF 280
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ +G PD TYN LI Y G+ +A +++ M R ++LPD+VT LM LCK
Sbjct: 281 LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK++EA +F M +G +PD+ SY ++ Y +G + + L M+G+GI PD +T
Sbjct: 341 YGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYT 400
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++++ Y G L A+ + E++ GV Y +I ALC+ + A ++
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y+ L++ C S+ A L E+++ ++ + + ++I C +GR
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIM 520
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++ D + G PD+ + +L++GYC+ + KA + + Y +
Sbjct: 521 DAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
N + + G + + + L + L+ G P+ + +I L+
Sbjct: 581 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 200/415 (48%), Gaps = 2/415 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+F R+ ++ G P + N L+ G + +V++EM R I P+ T N+L
Sbjct: 278 EAF--LRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLM 335
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK G + + + + +G +PD+ +Y +++ Y KG L D L+ +M +
Sbjct: 336 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIA 395
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T++ L+ G + +A +F+ M G+ PD+V+Y T+I A C+ GKM ++
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G+ PD + ++QG+ G LL A L++E+ G+ + + +I LC+
Sbjct: 456 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCK 515
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A ++ + G P +Y+ LM+ C + AL + D MV I+P++
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L+ +C IGR E +SL EML+ G+ P + + ++I+G + A+
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMT 635
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +YN V F ++ + + L K + + +T MI +++
Sbjct: 636 ESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 690
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 189/393 (48%), Gaps = 43/393 (10%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ ++ R G+ + N L FC+ D+ ++ L + E G PD+ +Y+ L+ S C
Sbjct: 138 FGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLC 197
Query: 287 KKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+G+ A L R+M + PD+V YTT+++ KEG V +A LF MV RG+ PD
Sbjct: 198 DQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPD 257
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V+Y++++ A CK M ++++ L +M+ G+ PD +T ++ GY G+ A+ +
Sbjct: 258 LVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFK 317
Query: 405 ELQRFG--------------------VSISRDIYDYLIVALCQDNRPFA----------- 433
E++R + +RD++D + + Q+ F+
Sbjct: 318 EMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMK-GQNPDVFSYKIMLNGYATK 376
Query: 434 -----ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
T L + + DG P + ++ L+++ C + A+++ +EM D +KP + TY
Sbjct: 377 GCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 436
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I C IG+ +A+ ++M++ G+ PD LI G+C + KA+ L+
Sbjct: 437 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMN 496
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
D ++++ N + L ++M+ Q F
Sbjct: 497 NGMRLDIVFFSSIINNLCK---LGRIMDAQNIF 526
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 35/372 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I+E+ F G P + S +LNG C+ +++ M GI P+ +
Sbjct: 340 KYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIY 399
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF++L + G +DK ++ + G PD+VTY T+I++ C+ G+++DA + M
Sbjct: 400 TFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQM 459
Query: 302 YRRNVLPD-----------------------------------LVTYTTLMNGLCKEGKV 326
+ V PD +V +++++N LCK G++
Sbjct: 460 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRI 519
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +F V+ G PD V Y+ L+ YC GKM+++ + M+ GI P+ +
Sbjct: 520 MDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTL 579
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V GY K GR+ L+L E+ + G+ S +Y+ +I L R A + + G
Sbjct: 580 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ K +A+ L E+ N+K + T +I R EA
Sbjct: 640 AINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 699
Query: 507 LMDEMLESGMLP 518
L + SG++P
Sbjct: 700 LFASISRSGLVP 711
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 3/299 (1%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P TY LM+ + + A F +++ GL DI+ N L+ +C+ + E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168
Query: 364 SKS-LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL+ G PD F+ I+++ +G+ A +L+ + G S D+ Y
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228
Query: 423 VALC--QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
V C ++ A L + + Q G P L Y+ ++ +LCK ++ A +MV++
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P TY LI + G+ EAV + EM +LPD +L+ C + +A
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ A K Q D SY + N +A G L + +L L G AP+ T +I +
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKA 407
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 138/333 (41%), Gaps = 3/333 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ- 331
P TY L+ + R A + + R + D++ L+ G C+ + EA
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIVQG 389
L HR G PD+ SY+ L+ + C +GK ++ LL M G PD ++
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
+ KEG + A +L E+ + G+ Y ++ ALC+ A + L ++ G +P
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
YN L+ +A+ + EM +I P + T L+ C G+ EA + D
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M G PD ++++NGY + + L D +++ + +A G
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L K M + G P+ +T +I +L +
Sbjct: 413 MLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCR 445
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 131/307 (42%), Gaps = 49/307 (15%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FN ++ D +KP Y ++ L K AM+ ++++ + +
Sbjct: 417 AMIIFNEMR-DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID--QGVAPDKYAYHC 473
Query: 169 LIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LI CT G + ++ + + ++ G + IV + ++N L KL I
Sbjct: 474 LIQGFCTH---------GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++ +G P+ +++L +C G ++K + + G +P++V Y TL++ YC
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYC 584
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP--- 343
K GR+++ L+R M ++ + P + Y +++GL G+ A FH M G++
Sbjct: 585 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKC 644
Query: 344 --------------------------------DIVSYNTLIFAYCKEGKMQESKSLLYEM 371
DI++ NT+I + +++E+K L +
Sbjct: 645 TYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 704
Query: 372 MGNGIYP 378
+G+ P
Sbjct: 705 SRSGLVP 711
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 194/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT--------- 173
+ T +YC ++H L + + A K L ++V K + VF ++
Sbjct: 10 RHTLQSYCTMIHFLCTHQMIAEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYV 68
Query: 174 -EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ + ++ L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + G P +V++NTL++ Y K G L+
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M++ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVP 414
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 151/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F G +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK ++ N +++ G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGYVPS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYVPSV 416
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 104/190 (54%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + L+ G P+ V+ L++G K +D ++Y++M + P+ T+N L + CK
Sbjct: 229 FDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD+ + +++ +G PD +TY TLI CK+G L AF + M + N+ D V
Sbjct: 289 KGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVA 348
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT L++GLC+EG+ +A ++ M+ GL P+I +Y +I +CK+G + LL EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 373 GNGIYPDTFT 382
+G P T
Sbjct: 409 RDGYVPSVVT 418
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK G ++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 139/353 (39%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + + G + +N L+ ++ KEG+++ ++S+
Sbjct: 99 VPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ G+ P + ++ GY K G L L +Q GV
Sbjct: 159 FDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ--------------- 203
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM++ + P+ T
Sbjct: 204 --------------------PDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVT 243
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A+ L +
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMS 303
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++G L E +KR ++ +++ +I L
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F T + +++ K E +G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + G PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML +G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 222/486 (45%), Gaps = 12/486 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D I Y I+ L K + K+L E+ + C V F ++
Sbjct: 3 DKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM--MAAGCNPDVFAFNGVM-------Q 53
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + + ++ + ++ ++ G++P VS + L++GL K+ +D+ ++ EM G P
Sbjct: 54 GFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTP 113
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++ L K VD + +++ G PD + + LI C+ G++ DA +
Sbjct: 114 SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF 173
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + P++ Y L++GLC G++ +A+ LF M SPD+V+YNTL+ A CK
Sbjct: 174 KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA 233
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++E L M G P+ T ++ G + G L AL + + G ++ Y
Sbjct: 234 RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 293
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV- 477
LI LC+ + A L E++ Q P YN L+ CK S+ +A L EM
Sbjct: 294 TTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 353
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++P++ T+ LI FC +G+ G A L+ EM G+ DS R+LI G ++
Sbjct: 354 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413
Query: 538 KA-EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+A E KKF + D S + + G++ + + + + G PN T + +
Sbjct: 414 EALEVYKQMREKKF-LLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472
Query: 597 IHSLWK 602
SL K
Sbjct: 473 SESLIK 478
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 225/493 (45%), Gaps = 13/493 (2%)
Query: 100 LRCQSDSVSALTFFNWVKNDL-EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+R ++ + + T+ + +K+ + E KP S L + A N FA + + +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 159 CPHSVDVFQDLI-SCTEDCNWAY-------VKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
+ +V+Q ++ S + N +Y K+G + ES K + + G PS+ + +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L+ L K +D +++EM R G P+ F L C+ G V + +++ + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++ YN L+ C G+L A L+ M + PD+VTY TL++ +CK +V E
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+LF M G P++++++TLI C+ G+++++ + M+ G P+ +T ++ G
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI-GQDGYVPS 449
+ +++ A L ++ + + Y+ LI C+ A L + G G P+
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ +N L++ CK + A L EM + + TYR LI + EA+ +
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M E L D C + G C ++++A A+ K + + E++ + + G
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480
Query: 570 ---DLSKLMELQK 579
D KLME K
Sbjct: 481 RVEDAQKLMEPAK 493
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 184/421 (43%), Gaps = 62/421 (14%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELV------------------ELVKDCPHSVD 164
KP + +Y +++H LA K ++K+L E+V + H+
Sbjct: 77 KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASS 136
Query: 165 VFQDLISCTEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+F ++I + + G ++++ + F++ G QP++ N LL+GL
Sbjct: 137 LFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLC 196
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
++Q ++ EM P+ T+N L CK V++ E + G+ P+++
Sbjct: 197 SSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVI 256
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T++TLI C+ G L A ++ M P+ TYTTL++GLC+ KV +A +LF +M
Sbjct: 257 TFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKM 316
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGR 395
+ PD V+YN+LI YCK G M E++ L EM G G+ P T ++ G+ K G+
Sbjct: 317 TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGK 376
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVAL------------------------------ 425
L A LV E+ G++ Y LI L
Sbjct: 377 LGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVS 436
Query: 426 -----CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
C+ A ++ E + G VP+ E + L ESL K V DA L + R+
Sbjct: 437 FVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 496
Query: 481 I 481
I
Sbjct: 497 I 497
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 144/303 (47%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +N+ ++ TY++++ L KE K E++++ M+ G +PD+ ++N ++ + +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M++++ + M+ +G PD + I++ G K G+L +L ++ E+ G + S Y
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ AL + R A+SL + + + G+ P ++ EL+ LC+ V DA +M
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P++ Y L+ C G+ +A +L EM PD L++ C + V +
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + + +++ + + G+L K +E+ L G PN T +I L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Query: 601 WKG 603
+
Sbjct: 301 CRA 303
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 191/404 (47%), Gaps = 3/404 (0%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
++ S N LL L + Q+++EM P+ T+ IL H C G+++ L
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLL 314
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ G +P+ Y ++++ C KG ++DA + M +R V+ D YTT+++G C +
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G + A + F M +GL+ D V+Y T+I C+ +++E++ LL EM + D T
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++ GY K G++ A + + + GV+ + Y L LC+ AA LL +
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G + YN L+ LCK + A+ +M +KP + TY LI C G
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDR 554
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A SL+ EML+ G+ P VL+NG+CM V + LL + +K + +YN++
Sbjct: 555 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMK 614
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + ++ E+ K PN T +I K K
Sbjct: 615 QYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMK 658
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 212/452 (46%), Gaps = 10/452 (2%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+++ P Y +++H + A+K+L E+V + V+ +++ D
Sbjct: 283 DEMASAPDVVTYGILIHGHCALGELENAVKLLDEMV--AGGVEPNATVYTSVVALLCDKG 340
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W + ++ E + LD +++S G + + ++EM R G+
Sbjct: 341 WISDALRVV-EDMVQRKVILDEALYTTVLS------GFCNKGDLVSARRWFDEMQRKGLA 393
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ T+ + + C+ ++++ L+++ D D VTY LI YCK+G++ +AF +
Sbjct: 394 TDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQM 453
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M +R V P++VTYT L +GLCK+G V+ A++L H M ++GL + +YN+LI CK
Sbjct: 454 HNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCK 513
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G ++++ + +M + PD +T ++ K G L A +L+ E+ G+ +
Sbjct: 514 AGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVT 573
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ C R LL+ + + P+ YN LM+ C +++ + M
Sbjct: 574 YNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMR 633
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R++ P+ +TY LI C EA+ DEM++ G + LI +K
Sbjct: 634 SRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFV 693
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNM-FAED 568
+A L K+ +++ Y+ ++ F ED
Sbjct: 694 EARELFHDMRKEGLTAESDVYDFYIDLNFNED 725
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + E+F+ + G P++V+ L +GL K + ++ EM G+
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + CK G +++ + ++ PD+ TY TLI + CK G L+ A L
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P +VTY LMNG C G+V +L M+ + + P+ +YN+L+ YC E
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + + M + P+ T I+++G+ K + AL E+ + G ++ Y
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI L + + A L + ++G ++Y+ ++ D++ L L DE+V+
Sbjct: 680 SALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739
Query: 479 RNI 481
+I
Sbjct: 740 ASI 742
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 154/511 (30%), Positives = 249/511 (48%), Gaps = 38/511 (7%)
Query: 53 PET-QNP-NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSAL 110
PE QNP N IV +IC+ + S L K L P + A E+ R L ++ AL
Sbjct: 67 PEVIQNPENWIVKVICTLCVRTHSLDACLDYFSKTLTPSI-AFEVVRGL----NNPELAL 121
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC----PHSVD-- 164
FF + +L + + Y ++ L+ + F E + V DC HS D
Sbjct: 122 KFFQLSRVNLNLCHSFRTYSFLLRSLS---EMGFH-----ESAKAVYDCMNIDGHSPDAS 173
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V L+S D F R +D G + S+V N LLN L++ N +D+
Sbjct: 174 VLGFLVSSATDAG-----------KFNIARTWVD-GVEFSLVVYNKLLNQLVRGNQVDEA 221
Query: 225 WQVY-EEMGRIGICP-NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ E+MG G P ++ +FNIL C+ G VDK ++ G PD++TYNTLI
Sbjct: 222 VCFFREQMGLHG--PFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLI 279
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ +C+ ++ L + + +N L PD+VTYT++++G CK GK+ +A LF+ M+ G+
Sbjct: 280 NGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGI 339
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P+ ++N LI + K G M ++++ EM+ G PD T ++ G+ + G++ +L
Sbjct: 340 KPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLK 399
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L EL +S + + L ALC++NR A L + V +YN +++ C
Sbjct: 400 LWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFC 459
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K +V +A ++ EM ++ KP TY LI C GR EA+S+ + ML +G PDS
Sbjct: 460 KAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSI 519
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
LI+ N+A ++ ++ F +
Sbjct: 520 TMTSLISCLLKAGMPNEAYRIMQIASEDFNL 550
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 185/396 (46%), Gaps = 6/396 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+FLL L ++ + VY+ M G P+ ++L + D K N + +
Sbjct: 141 SFLLRSLSEMGFHESAKAVYDCMNIDGHSPDA---SVLGFLVSSATDAGKFN--IARTWV 195
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G + LV YN L++ + ++++A +R + D ++ L+ GLC+ GKV +
Sbjct: 196 DGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDK 255
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIV 387
A +LF+ M G SPD+++YNTLI +C+ ++ LL E++ N + PD T I+
Sbjct: 256 AFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSII 315
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY K G++ A L + G+ + ++ LI + +A ++ E + G
Sbjct: 316 SGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCP 375
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + + L++ C+ V +L L E+ RN+ P+ T+ L C R EA
Sbjct: 376 PDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGF 435
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ ++ ++ + +I+G+C +V++A +L +K D +Y +
Sbjct: 436 LRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCM 495
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
G LS+ + + R L G AP+++T +I L K
Sbjct: 496 KGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKA 531
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 239/523 (45%), Gaps = 49/523 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y +++ L + A ++L E+ E K +V F +I+ +V
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE--KSISPNVVTFSSVIN-------GFV 425
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL+ ++ + R + G P++V+ L++G K D +VY +M G+ N
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKF 485
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + +NG +++ + G D V Y TLI K G + AF + +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RN+LPD V Y +N LC GK +EA M + GL PD +YNT+I ++C++G+
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG-------------------------RL 396
++ LL+EM + I P+ T +V G G R+
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665
Query: 397 LSA------LNLVVELQRF----GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
L A L++++++ + G+ +Y+ L+ LC AT +LE + G
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P +N L+ CK + +A +M+ +NI P+++T+ L+ +GR GEA +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYNAVFNM 564
++ EM +SG+ P++ +L G+ K NK EA+ + K + +YNA+ +
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGH--GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
F + G +++ EL K + G P + T ++ S W + R+
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV-SGWYDLARE 885
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 221/508 (43%), Gaps = 52/508 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P YC ++ LA + + +L E+V S V DL++ T +W K
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMV--------SRGVVMDLVTYTALMDW-LGKQ 357
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E T R L P+ V+ L++ L K + +D+ QV EM I PN TF
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK---------------- 287
+ + + F K G +DK + ++E G +P++VTY TLI + K
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477
Query: 288 -------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G++ +A L++ + D V YTTL++GL K G +
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + ++ R + PD V YN I C GK +E+KS L EM G+ PD T ++
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ ++G AL L+ E++ + + Y+ L+ L A LL + G+ P
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S + ++++ + + L + + M++ + ++ Y L+ C G + +A ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EML SG+ PD+ LI G+C ++ A A + + ++N +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 569 GDLSK----LMELQKRFLRLGFAPNNLT 592
G + + L+E++K G PNNLT
Sbjct: 778 GRIGEAGTVLIEMEKS----GLEPNNLT 801
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 193/420 (45%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E+F + + G +V+ + L+ GL + + + ++ EM ++G PN
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN 308
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L K G ++ L ++ G DLVTY L+ K+G+ ++ R
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
N+ P+ VTYT L++ LCK V EA Q+ M + +SP++V+++++I + K G
Sbjct: 369 FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ M GI P+ T ++ G+ K +AL + ++ GV +++ I D
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L Q+ + A +L + G Y L++ L K + A E++DR
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P Y I C C +G+ EA S + EM G+ PD +I +C + + KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL + +YN + G + K L + GF+P++LT + ++ +
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 185/400 (46%), Gaps = 8/400 (2%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
++ N L+ G ++ V + M G+ + +N L FC+ G VD G L+
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E G DP++ TY I YC+ + +AF LY M R VL D+VT + L+ GLC++G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ EA+ LF M G +P+ V+Y TLI + K G+ +E SLL EM+ G+ D T
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRD----IYDYLIVALCQDNRPFAATSLLER 440
++ GK+G+ + V + RF +S + Y LI ALC+ + A +L
Sbjct: 349 ALMDWLGKQGK----TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + P++ ++ ++ K + A K M +R I P++ TY LI F
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A+ + +ML G+ + I L+NG + +A AL + D +Y
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + GD+ + + + P+ + I+ L
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 4/365 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T +NIL + V L ++ + G D VT NTL++ C+ G+++ A L
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ L D++ + TL+ G C+ G A + RM +GL D+V YNTL+ +C+
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ ++ +L M G+ P+ T + Y + + A +L + R GV +
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ LC+D R A +L + + G P+ Y L++SL K + L L EMV
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R + L TY AL+ G++ E + L + P+ VLI+ C +V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+AE +L +K + ++++V N F + G L K E ++ G PN +T +I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456
Query: 598 HSLWK 602
+K
Sbjct: 457 DGFFK 461
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 165/366 (45%), Gaps = 17/366 (4%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+++ ++ L+R + R + +P+ V+ N LL L + V EM + G+
Sbjct: 81 YSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVP 132
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP-DLVTYNTLISSYCKKGRLNDAFY 296
+ T N L C+NG VD ++ G D++ +NTLI+ YC+ G A
Sbjct: 133 FDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALS 190
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ M + + D+V Y TL+ G C+ G+V A + M G+ P++ +Y I YC
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ ++E+ L M+ NG+ D T +V G ++GR A L E+ + G + +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL---CKCDSVADALLLK 473
Y LI +L + R SLL + G V L Y LM+ L K D V D L
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+ N+ P+ TY LI C EA ++ EM E + P+ +ING+
Sbjct: 371 ---LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 534 KDVNKA 539
++KA
Sbjct: 428 GLLDKA 433
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 149/350 (42%), Gaps = 35/350 (10%)
Query: 50 NFLPETQNPNKIVDLIC--SSLKKGDSHLTLLQN-DLKPLLPHLGAHEISRVLLRC-QSD 105
N LP+ N ++ +C K+ S LT ++N LKP +S C + +
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSH----CRKGE 604
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV------------ 153
+ AL + +K IKP Y +V L A +L E+V
Sbjct: 605 TAKALKLLHEMKMS-SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHR 663
Query: 154 ELVKDCPHS--VDVFQDLISCTEDCNW-AYVKV-----------GLIRESFKTFRKTLDV 199
+++ C S +DV D+ + A + V G+ R++ + L
Sbjct: 664 RVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGS 723
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P ++ N L+ G K + +D + Y +M I PN TFN L G + +
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++E+ G +P+ +TY+ L + + K+ +A LY M + +P + TY L++
Sbjct: 784 GTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
K G + +A +LF M RG+ P +Y+ L+ + + Q+S++ +
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYF 893
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 197/417 (47%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E K G P +V N L++G + + + + EM G P T+
Sbjct: 994 VEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGS 1053
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + K GD++K+ ++ + GF P++ YN++I + C A + + M+
Sbjct: 1054 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASG 1113
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD++T+ TL+ GLC EG VR+A + R L+P+ +SY LI +C G++ +
Sbjct: 1114 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1173
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL EMMG G PD T ++ G G++ AL + ++ V +IY+ LI L
Sbjct: 1174 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ AA ++LE + + P +Y L++ + +++ DA + + M + + P +
Sbjct: 1234 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDI 1293
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+ A+I +C G EA+ M M + G +PD +I+GY + ++N A L
Sbjct: 1294 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1353
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K+ + +Y+++ N + + GD L +PN +T +I SL+K
Sbjct: 1354 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFK 1410
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 196/425 (46%), Gaps = 1/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY G++ ++ + + + G P + CN LL L++ D ++Y+EM
Sbjct: 916 AYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSG 975
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ +L C V++ +E G P +V YN LI YC++G + L
Sbjct: 976 ADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLL 1035
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M LP LVTY +L+N L K+G + + LF M RG SP++ YN++I A C
Sbjct: 1036 LGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCN 1095
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ +L +M +G PD T ++ G EG + A + + E R ++ ++
Sbjct: 1096 CRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLS 1155
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C A+ LL + G+ P + + L+ L V++AL+++++M
Sbjct: 1156 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1215
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+R + P ++ Y LI C A ++++EMLE + PD + LI+G+ +++
Sbjct: 1216 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1275
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + F K D S NA+ + + G +S+ + ++G P+ T +I
Sbjct: 1276 DARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1335
Query: 598 HSLWK 602
K
Sbjct: 1336 SGYAK 1340
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 188/389 (48%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L+ GL +++ ++ E G P+ +N+L +C+ GD+ + L ++E G
Sbjct: 984 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNG 1043
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F P LVTY +LI+ KKG L L+ M +R P++ Y ++++ LC +A
Sbjct: 1044 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAM 1103
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ +M G PDI+++NTLI C EG +++++ L E + + P+ + ++ G+
Sbjct: 1104 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1163
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
G L+ A +L+VE+ G + + LI L + A + E++ + P +
Sbjct: 1164 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 1223
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
IYN L+ LCK + A + +EM+++N++P Y LI F G+A + +
Sbjct: 1224 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1283
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M G+ PD C +I GYC +++A + K I D +Y V + +A+ G+
Sbjct: 1284 MEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1343
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L+ + ++ PN +T +I+
Sbjct: 1344 LNGALRWLCDMIKRKCKPNVVTYSSLING 1372
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 200/478 (41%), Gaps = 85/478 (17%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P++V+ L+N L K +++ ++ EM + G PN +N + C +
Sbjct: 1043 GFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQA 1102
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++ G DPD++T+NTLI+ C +G + A + R RR + P+ ++YT L++G
Sbjct: 1103 MVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHG 1162
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C G++ A L M+ RG +PD+V++ LI GK+ E+ + +M ++PD
Sbjct: 1163 FCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPD 1222
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+++ G K+ L +A N++ E+ V +Y LI + A + E
Sbjct: 1223 VNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFE 1282
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALL----------LKDE-------------- 475
+ G P + N +++ C+ +++A+L + DE
Sbjct: 1283 FMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342
Query: 476 -----------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM---------------- 508
M+ R KP++ TY +LI +C G + A L
Sbjct: 1343 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 1402
Query: 509 ---------DEMLESGML----------PDSQICRVLINGY------------CMEKDVN 537
D++L +G+ P+ L+NG C +V+
Sbjct: 1403 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1462
Query: 538 KAEALLGFFAK-KFQIYDTE--SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ALL F K F I D +YNA+ L + ++ + R + G+ PN +T
Sbjct: 1463 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT 1520
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 194/470 (41%), Gaps = 31/470 (6%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
F P Q N ++D +C+ + + L Q P + + + C V
Sbjct: 1078 GFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFN-TLITGLCHEGHVRK 1136
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQ 167
F E+ P +Y ++H + A +L E++ H+ DV F
Sbjct: 1137 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMM----GRGHTPDVVTFG 1192
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI V G + E+ K + P + N L++GL K + +
Sbjct: 1193 ALIH-------GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNI 1245
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEM + P+ + L F ++ ++ E +E +G PD+V+ N +I YC+
Sbjct: 1246 LEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQ 1305
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G +++A M + +PD TYTT+++G K+G + A + M+ R P++V+
Sbjct: 1306 FGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVT 1365
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y++LI YCK G ++ L M + P+ T I++ K+ ++L A L E
Sbjct: 1366 YSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA-GLYFETM 1424
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLL----ERIGQDGYV------------PSLE 451
D+ + +V P S+ E G+D + P
Sbjct: 1425 LLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNS 1484
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
YN ++ SLC+ + + +AL K+ M + P+ T+ +L+ FC +G+S
Sbjct: 1485 AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 1534
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 165/387 (42%), Gaps = 21/387 (5%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ L++GL+ + + V E+M + P+ + +N+L CK +
Sbjct: 1183 GHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAA 1242
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE++ E+ PD Y TLI + + L DA ++ M + V PD+V+ ++ G
Sbjct: 1243 KNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKG 1302
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+ G + EA M G PD +Y T+I Y K+G + + L +M+ P+
Sbjct: 1303 YCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPN 1362
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ GY K G SA L +Q +S + Y LI +L + ++ A E
Sbjct: 1363 VVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFE 1422
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVA--------------DALLLKDEMVDRNI-KPS 484
+ + P+ + L+ L C DALL+ + + +I P
Sbjct: 1423 TMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPR 1482
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
S Y A+I C EA+ + M + G +P+ L+ G+C V K+
Sbjct: 1483 NSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFC---SVGKSVNWRT 1539
Query: 545 FFAKKFQIYDTE---SYNAVFNMFAED 568
+FQ + E Y +F+ +A +
Sbjct: 1540 ILPNEFQQEEFEIIFRYKFLFDQYATE 1566
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 36/297 (12%)
Query: 340 GLSPDIVSYNTLIFAYCKEG------------------------------------KMQE 363
G +P L+ AY G + +
Sbjct: 902 GAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDD 961
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ L EM+G D ++ ++V+G E R+ L L+ G Y+ LI
Sbjct: 962 ARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1021
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ LL + +G++P+L Y L+ L K + L EM R P
Sbjct: 1022 GYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1081
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y ++I C + +A+ ++ +M SG PD LI G C E V KAE L
Sbjct: 1082 NVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1141
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + SY + + F G+L +L + G P+ +T +IH L
Sbjct: 1142 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGL 1198
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 207/419 (49%), Gaps = 1/419 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ + +++G+QP V+ L++GL + N + + E M G P+ T+
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + CK G+ D L K+E+ + D+V YNT+I CK ++DAF L+ M +
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD+ TY L++ LC G+ +A +L M+ + ++PD+V +N LI A+ KEGK+ E++
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 366 SLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
L EM+ +PD +++G+ K R+ + + E+ + G+ + Y LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
Q A + +++ DG P + YN L++ LC +V AL++ + M R++K
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ TY +I C G+ + L + G+ P+ +++G+C + +A+AL
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ +YN + DGD + EL K GFA + T + + L G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 197/406 (48%), Gaps = 9/406 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV + LL+ + K+N D + E+M +GI N +T++I + FC+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G+ P +VT N+L++ +C R+++A L M PD VT+TTL++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y +I CK G+ + +LL +M I D
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + A +L +++ G+ Y+ LI LC R A+ LL +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRS 501
+ P L +N L+++ K + +A L DEMV ++ P + Y LI FC R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
E + + EM + G++ ++ LI+G+ +D + A+ + D +YN +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 562 FNMFAEDGDLSKLM----ELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ +G++ + +QKR ++L +T MI +L K
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDI----VTYTTMIEALCKA 474
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 179/381 (46%), Gaps = 1/381 (0%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D ++ +M + P+ F+ L K D V E+++ G +L TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
I+ +C++ +L+ A + M + P +VT +L+NG C ++ EA L +MV G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD V++ TL+ + K E+ +L+ M+ G PD T ++ G K G AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
NL+ ++++ + IY+ +I LC+ A L ++ G P + YN L+ L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM-LPD 519
C +DA L +M+++NI P L + ALI F G+ EA L DEM++S PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
LI G+C K V + + +++ + +T +Y + + F + D + K
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 580 RFLRLGFAPNNLTCKYMIHSL 600
+ + G P+ +T ++ L
Sbjct: 416 QMVSDGVHPDIMTYNILLDGL 436
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 166/323 (51%), Gaps = 12/323 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A FN ++ IKP Y ++ L ++S A ++L +++E K+ + F
Sbjct: 269 AFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE--KNINPDLVFFNA 325
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI A+VK G + E+ K + + + P +V+ N L+ G K +++ +V
Sbjct: 326 LID-------AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ EM + G+ NT T+ L H F + D D +++ +G PD++TYN L+ C
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + A ++ M +R++ D+VTYTT++ LCK GKV + LF + +G+ P++V+
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y T++ +C++G +E+ +L EM +G P++ T +++ ++G ++ L+ E++
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 408 RFGVSISRDIYDYLIVALCQDNR 430
G + + L+ + D R
Sbjct: 559 SCGFAGDASTFG-LVTNMLHDGR 580
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 166/350 (47%), Gaps = 2/350 (0%)
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D + F + ++ F P +V ++ L+S+ K + + L M + +L TY+
Sbjct: 58 DAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N C+ ++ A + +M+ G P IV+ N+L+ +C ++ E+ +L+ +M+ G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PDT T +V G + + A+ LV + G Y +I LC+ P A +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL ++ + + IYN +++ LCK + DA L ++M + IKP + TY LI C C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DT 555
GR +A L+ +MLE + PD LI+ + E + +AE L K + D
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YN + F + + + ME+ + + G N +T +IH ++ +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ +A LF MV P IV ++ L+ A K K SL +M GI + +T
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I + + + +L AL ++ ++ + G S + L+ C NR A +L++++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY P + L+ L + + ++A+ L + MV + +P L TY A+I C G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++L+++M + + D I +I+G C K ++ A L K D +YN + +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPN 589
G S L L P+
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPD 319
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 107/241 (44%)
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ ++ L +M+ + +P ++ K + ++L ++Q G+S + Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I C+ ++ A ++L ++ + GY PS+ N L+ C + +++A+ L D+MV+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P T+ L+ ++ EAV+L++ M+ G PD +ING C + + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL K D YN + + + + +L + G P+ T +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 600 L 600
L
Sbjct: 295 L 295
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%)
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ F + S D + L + QD + A L + + PS+ +++L+ ++ K +
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 91
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ L ++M + I +L TY I FC + A++++ +M++ G P L
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+NG+C +++A AL+ + DT ++ + + + S+ + L +R + G
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 587 APNNLTCKYMIHSLWKGME 605
P+ +T +I+ L K E
Sbjct: 212 QPDLVTYGAVINGLCKRGE 230
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 243/545 (44%), Gaps = 46/545 (8%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
+SD AL N + + + YC+ V IL S AM +L L C
Sbjct: 10 KSDGKLALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTAI 69
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV----------GFQPSIVSCNFLL 212
+IS + N +V L+ +++ RK LD GF+ S V+CN +L
Sbjct: 70 FTSLLRIISRFDSTN--HVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSIL 127
Query: 213 NGLLK-----------------------------LN--CIDQCWQVYEEM-GRIGIC--P 238
L++ LN C + ++ E+M ++ C
Sbjct: 128 KALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS 187
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N+ T+N + H + K G LE +E + D+ TYN +I C+ R AF L
Sbjct: 188 NSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLL 247
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + ++ PD TY TL+NG EGK+ A +F+ M+ + L P + +Y T+I YC+
Sbjct: 248 KRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRN 307
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ S+L EM G+ P T ++ GY K L AL+L+V+L+ G++I++ +
Sbjct: 308 RRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMC 367
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI CQ A +L+ + +DG P + Y+ L+ +C+ + + + M
Sbjct: 368 TILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQK 427
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P+ Y LIC +C G A+ ++ G++ + I L+ + E + +
Sbjct: 428 SGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITE 487
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
AE + ++ +++ S+N + + + G + + + +R G +PN T + ++
Sbjct: 488 AEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLR 547
Query: 599 SLWKG 603
L +G
Sbjct: 548 GLCQG 552
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 200/404 (49%), Gaps = 1/404 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G PS ++ + LLNG K++ + + ++ GI N IL FC+ G++ K
Sbjct: 324 GVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKA 383
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+ + E+G DPD+VTY+ LI+ C+ ++++ + M + +LP+ V YTTL+
Sbjct: 384 KQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICY 443
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK G V+ A + F + RGL + V +N L+ A+ +EG + E++ M I +
Sbjct: 444 YCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFN 503
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ + I+ Y G+++ A ++ ++ R+G S + Y L+ LCQ A +
Sbjct: 504 SVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMF 563
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + +N L+ +CK ++ +AL + ++MV N P + TY L+ FC G
Sbjct: 564 CLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKG 623
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESY 558
+ A+ ++ MLE G++PD+ L+NG E V A + K +Y D +Y
Sbjct: 624 KILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 683
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N++ N + + G+++ + + + PN+ + ++H K
Sbjct: 684 NSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVK 727
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/581 (22%), Positives = 260/581 (44%), Gaps = 40/581 (6%)
Query: 32 SLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTL---LQNDLKP--- 85
+L +++D E S+ +Y + N ++D +C + + L L ++DL P
Sbjct: 208 ALCVLEDMERDSIQADIYTY-------NIMIDKLCRIKRSARAFLLLKRMRKDDLTPDEC 260
Query: 86 -----LLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
+ G +I+ RC F + ++ L P+ + Y ++ N
Sbjct: 261 TYNTLINGFFGEGKINHA--RC--------VFNHMLRQTLV--PSVATYTTMIDGYCRNR 308
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
+ A+ +L E+ E+ P + + L++ Y KV ++ + G
Sbjct: 309 RIDKALSVLSEM-EITGVMPSEL-TYSALLN-------GYCKVSMLGPALDLMVDLKSRG 359
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ C L++G ++ I + Q+ + M GI P+ T++ L + C+ + +
Sbjct: 360 ITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETK 419
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L ++++ G P+ V Y TLI YCK G + A + +YRR ++ + V + L+
Sbjct: 420 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAF 479
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
+EG + EA M +S + VS+N +I +YC GK+ E+ S+ +M+ G P+
Sbjct: 480 YREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNV 539
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T Q +++G + G L+ A + L ++ ++ L++ +C+ A + E+
Sbjct: 540 CTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEK 599
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ ++ +P + Y L+ C+ + AL++ M+++ + P Y L+ G+
Sbjct: 600 MVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQ 659
Query: 501 SGEAVSLMDEML-ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
A + E++ + G+ D L+NGY +VN + ++ + ++ SYN
Sbjct: 660 VKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYN 719
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + + G SK + L K +R G P+N+T + +I L
Sbjct: 720 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 760
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 182/420 (43%), Gaps = 36/420 (8%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV------------ 256
N LL G+ K +D+ + E+M + P+ HT+ IL FC+ G +
Sbjct: 578 NALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLE 637
Query: 257 -----DKV------NG-------------FLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
D V NG F E I +EG D + YN+L++ Y K G +N
Sbjct: 638 KGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVN 697
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ MY+ V P+ +Y LM+G K G+ ++ L+ MV +G+ PD V+Y LI
Sbjct: 698 TIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLI 757
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+ G + + L +M+ GI+PD I++ + ++ ++ +AL L ++ +S
Sbjct: 758 LGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLS 817
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
S + +I L + N + +L + Q G P+ Y L+ + C+ + A L
Sbjct: 818 PSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRL 877
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
K+EM I P+ ++I C G+ EAV + M+ SGM+P L++ C
Sbjct: 878 KEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCK 937
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E + A L D SYN + +D +S ++L G PN T
Sbjct: 938 ESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTT 997
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 189/411 (45%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGIC 237
+ + G I + + L+ G P V+ LLNGL+ + V++E+ + G+
Sbjct: 618 GFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLY 677
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ +N L + + K G+V+ + + + + P+ +YN L+ Y K+G+ + + YL
Sbjct: 678 ADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 737
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
Y+ M R+ + PD VTY L+ GL + G + A + +MV G+ PD + ++ LI ++ +
Sbjct: 738 YKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSE 797
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ KM + L M + P + T ++ G ++ L + ++ E+ + G+ +
Sbjct: 798 KSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTH 857
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ A C+ A L E + G VP+ + ++ LC+C + +A+++ M+
Sbjct: 858 YIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMM 917
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P+++T+ L+ C + +A+ L M + D VLI G C +K ++
Sbjct: 918 RSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHIS 977
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
A L G K + +Y + G + EL + G P
Sbjct: 978 DALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 157/331 (47%), Gaps = 9/331 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E+ P S++Y +++H +FS ++ + +V K ++ LI +C
Sbjct: 710 EVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVR--KGIRPDNVTYRLLILGLSEC---- 763
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
GLI + K K + G P + + L+ + + + +++ M + + P++
Sbjct: 764 ---GLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSS 820
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
TF+ + + + +D+ + L ++ + G P+ Y L+++ C+ G ++ AF L
Sbjct: 821 KTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEE 880
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M ++P V ++++ GLC+ GK+ EA +F M+ G+ P + ++ TL+ + CKE K
Sbjct: 881 MKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESK 940
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L M + D + +++ G K+ + AL+L E++ G+ + Y
Sbjct: 941 IADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYIT 1000
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
L A+ R LLE I + G +P+ +
Sbjct: 1001 LTGAMYSTGRMQNGEELLEDIEERGLIPAFK 1031
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 206/437 (47%), Gaps = 12/437 (2%)
Query: 176 CNWAYVKVGLIRESFKT---FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM- 231
CN +G RE K RK D+ QP++++ L+N L K ID +V+E+M
Sbjct: 155 CNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMK 214
Query: 232 -----GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++ + P+T +N L CK G ++ + K+ + P T+N LI+ YC
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYC 274
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+ G + A L+ M + P+++T TL++G+CK ++ A + F M +GL + V
Sbjct: 275 RSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNV 334
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y I A+C M ++ L EM +G +PD ++ G + GRL A ++V +L
Sbjct: 335 TYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKL 394
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ G + R Y+ LI C+ N+ A L + G P YN L+ K +
Sbjct: 395 KEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNF 454
Query: 467 ADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM--LESGMLPDSQIC 523
A +M + + P++ TY ALI +C EA+ + EM + S + P++ I
Sbjct: 455 KLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIY 514
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+LI+ C + VN A +LL + + +T +YN++F + L K +L R +
Sbjct: 515 NILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE 574
Query: 584 LGFAPNNLTCKYMIHSL 600
P+ +T + + L
Sbjct: 575 QACNPDYITMEILTEWL 591
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 11/355 (3%)
Query: 149 LCELVELVKD-CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS 207
LC + ++ D C + F LI+ Y + G I + K F + + +P++++
Sbjct: 248 LCLMGKMRSDQCAPTTATFNCLIN-------GYCRSGEIEVAHKLFNEMENAQIEPNVIT 300
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N L++G+ K N I + + M + G+ N T+ + + FC +++K FL+++
Sbjct: 301 LNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
++G PD V Y TLI + GRL+DA + + D V Y L++ CK+ K+
Sbjct: 361 KDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLD 420
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQII 386
A + + M G+ PD V+YNTLI + K G + + + +M G+ P FT +
Sbjct: 421 RAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGAL 480
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRD--IYDYLIVALCQDNRPFAATSLLERIGQD 444
+ Y + A+ + E+ + + IY+ LI +LC+ + A SLL+ +
Sbjct: 481 IHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFR 540
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
G +P+ YN + ++L + + A L D MV++ P T L +G
Sbjct: 541 GVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVG 595
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 184/430 (42%), Gaps = 16/430 (3%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--GRIGICPN 239
++G++ E+ F TLD + + V N ++N LLK +D V +EM PN
Sbjct: 18 RIGMVDEALAAF-STLDSHAKNTNVR-NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPN 75
Query: 240 THT----FNILTHVFCKNGDV--DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
T FN L + G V D++ G + K + PD + LIS C+ G N
Sbjct: 76 DKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNL 135
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A+ + + N L D L+ GL K + + + L +M + P ++++ LI
Sbjct: 136 AWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILIN 195
Query: 354 AYCKEGKMQESKSLLYEMMGNG------IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
CK ++ ++ + +M G + PDT ++ G K GR AL L+ +++
Sbjct: 196 HLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMR 255
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ + ++ LI C+ A L + P++ N L++ +CK + ++
Sbjct: 256 SDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRIS 315
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A+ M + +K + TY I FC + +A+ +DEM + G PD+ + LI
Sbjct: 316 TAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLI 375
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G ++ A +++ + D YN + + F + L + E G
Sbjct: 376 CGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVK 435
Query: 588 PNNLTCKYMI 597
P+++T +I
Sbjct: 436 PDSVTYNTLI 445
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 19/311 (6%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ + +S F V +K + Y + ++ N + AM+ L E+ + C
Sbjct: 309 CKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSK--DGCFP 366
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V+ LI C A + G + ++ K + GF V N L++ K N +
Sbjct: 367 DAVVYYTLI-----CGLA--QAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKL 419
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI-EEEGFDPDLVTYNT 280
D+ + EM G+ P++ T+N L F K G+ + F++K+ EEEG P + TY
Sbjct: 420 DRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGA 479
Query: 281 LISSYCKKGRLNDAFYLYRIM--YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
LI +YC +++A +++ M V P+ V Y L++ LCK+ +V A L M
Sbjct: 480 LIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKF 539
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ P+ +YN++ A + + ++ L+ M+ PD T +I+ + LS
Sbjct: 540 RGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTE-------WLS 592
Query: 399 ALNLVVELQRF 409
A+ + +L++F
Sbjct: 593 AVGEITKLKKF 603
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 12/214 (5%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y +++ NK A + L E+ EL P SV + LIS + K+G +
Sbjct: 406 YNVLISEFCKKNKLDRAQEWLNEM-ELAGVKPDSV-TYNTLIS-------YFSKIGNFKL 456
Query: 189 SFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTHTFNI 245
+ K +K T + G P++ + L++ N ID+ ++++EM + + PNT +NI
Sbjct: 457 AHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNI 516
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK V+ L+ ++ G P+ TYN++ + K L+ AF L M +
Sbjct: 517 LIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQA 576
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
PD +T L L G++ + + ++R
Sbjct: 577 CNPDYITMEILTEWLSAVGEITKLKKFTQGCMNR 610
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 179/348 (51%), Gaps = 3/348 (0%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + G++P +V+ + L+NG + N + + +M +G P+ +N + CK G
Sbjct: 70 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V+ +++E +G D VTYN+L++ C GR +DA L R M R+++P+++T+T
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+++ KEGK EA +L+ M R + PD+ +YN+LI C G++ E+K +L M+
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 249
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G PD T ++ G+ K R+ L E+ + G+ Y+ +I Q RP AA
Sbjct: 250 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 309
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ R+ P++ Y+ L+ LC V AL+L + M I+ ++TY +I
Sbjct: 310 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 366
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
C IG +A L + G+ PD +I+G+C ++ +K++ L
Sbjct: 367 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 414
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 184/398 (46%), Gaps = 3/398 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV + +L+ + K D ++ M GI + +++NI+ + C+
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ K+ + G++PD+VT ++LI+ +C+ R+ DA L M PD+V Y T+++G CK
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G V +A +LF RM G+ D V+YN+L+ C G+ ++ L+ +M+ I P+ T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ + KEG+ A+ L E+ R V Y+ LI LC R A +L+ +
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G +P + YN L+ CK V + L EM R + TY +I + GR
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A + M P+ + +L+ G CM V KA L K D +YN V
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + G++ +L + G P+ ++ MI
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 41/368 (11%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ F+ + K+ + D V +E G DL +YN +I+ C+ R A +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + PD+VT ++L+NG C+ +V +A L +M G PD+V YNT+I CK
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++ L M +G+ D T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVT----------------------------------- 152
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ LC R A L+ + VP++ + +++ K ++A+ L +EM
Sbjct: 153 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 212
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R + P + TY +LI C GR EA ++D M+ G LPD LING+C K V+
Sbjct: 213 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 272
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ L A++ + DT +YN + + + G E+ F R+ PN T ++
Sbjct: 273 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILL 329
Query: 598 HSL---WK 602
+ L W+
Sbjct: 330 YGLCMNWR 337
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 145/303 (47%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + LP +V ++ +++ + K LFH M G+ D+ SYN +I C+ +
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ S++ +MM G PD T ++ G+ + R+ A++LV +++ G IY+
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I C+ A L +R+ +DG YN L+ LC +DA L +MV R+
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P++ T+ A+I F G+ EA+ L +EM + PD LING CM V++A+
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+L K + D +YN + N F + + + +L + + G + +T +I
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300
Query: 601 WKG 603
++
Sbjct: 301 FQA 303
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+I P + ++ + KFS AMK+ E+ D V + LI+
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLIN-------GL 230
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G + E+ + + G P +V+ N L+NG K +D+ +++ EM + G+ +T
Sbjct: 231 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 290
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N + + + G D +++ P++ TY+ L+ C R+ A L+
Sbjct: 291 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 347
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + D+ TY +++G+CK G V +A LF + +GL PD+VSY T+I +C++ +
Sbjct: 348 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 407
Query: 361 MQESKSLLYEMMGNGIYP 378
+S L +M +G+ P
Sbjct: 408 WDKSDLLYRKMQEDGLLP 425
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 154/616 (25%), Positives = 272/616 (44%), Gaps = 67/616 (10%)
Query: 46 NPLYNFLPETQNP------NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI---- 95
NPL N P++ P +I L+ +++ SH Q+ L H +I
Sbjct: 10 NPLRNCKPKSSPPFSIPFRGEIKRLVNDTIQILKSHEKWEQS----LQTHFTESDIPIID 65
Query: 96 -SRVLLRCQSDSVSALTFFNWV-KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
+ +L +D L FF+W KN L S N +L ++F ++ L
Sbjct: 66 VTHFVLDRINDVELGLKFFDWASKNSLS---GSLNGTSYSSLLKLLSRFRVFPEIEFTLE 122
Query: 154 EL-VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQ-PSIVSCNFL 211
E+ K+ + + D++ AY VGL+ ++ + + + + PS +CN L
Sbjct: 123 EMKTKETIPTREALSDVLC-------AYADVGLVDKALEVYHGVVKLHNSLPSTYACNSL 175
Query: 212 LNGLLKLNCIDQCWQVYEEM----GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
LN L+K I+ Q+Y+EM IC + +T +I+ C G ++ +E
Sbjct: 176 LNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRW 235
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+G P++V YNTLI YCKKG + A+ L++ + + +P L T+ +L+NG CK G
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFE 295
Query: 328 EAHQLFHRMVHRGLS-----------------------------------PDIVSYNTLI 352
L M RGLS PD+V+YNTLI
Sbjct: 296 AIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLI 355
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+C G+++E++ LL + + G+ P+ T +V GY K+G A + ++E+ G+
Sbjct: 356 NHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLE 415
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI L A ++ +R+ G +P IYN LM L K ++ A ++
Sbjct: 416 VDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVM 475
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM+D+NI P Y L+ F G EA L ++E G+ P V+I G+
Sbjct: 476 LTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSK 535
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
++ A + + + D +++ + + + + +++ ++++ ++ PN +T
Sbjct: 536 SGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVT 595
Query: 593 CKYMIHSLWKGMERKF 608
+I+ + E K
Sbjct: 596 YTSLINGYCRKGETKM 611
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 194/419 (46%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I + K G P+IV N L++G K ++ +++++++ G P TF
Sbjct: 222 GRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTF 281
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + FCK G + ++ L ++++ G ++ YN +I + K G A + M
Sbjct: 282 GSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSE 341
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PDLVTY TL+N C G+V EA +L + + RGL+P+ ++Y L+ YCK+G+ +
Sbjct: 342 NCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTK 401
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM +G+ D + ++ G G + +AL + + G+ +IY+ L+
Sbjct: 402 ATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMN 461
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
L + + A +L + P +Y L++ + ++ +A L ++++ + P
Sbjct: 462 GLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDP 521
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I F G A+ +D+M + +PD +I+GY + ++N +
Sbjct: 522 GVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIF 581
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G K+ + +Y ++ N + G+ +L G P+ +T +I S K
Sbjct: 582 GLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCK 640
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 190/422 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G + ++K F+K GF P++ + L+NG K+ + + EM G+
Sbjct: 252 GYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSV 311
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +N + K G K L+++ E +PDLVTYNTLI+ +C +G + +A L
Sbjct: 312 NVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLL 371
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
RR + P+ +TYT L++G CK+G+ +A M GL D++SY LI
Sbjct: 372 EQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVA 431
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ + ++ MM GI PD +++ G K+G+L A ++ E+ ++ +Y
Sbjct: 432 GEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVY 491
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ + A L + I + G P + YN +++ K + +A+L D+M
Sbjct: 492 ATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRR 551
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P + T+ +I + + + M++ P+ LINGYC + +
Sbjct: 552 AHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKM 611
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
AE L +Y+ + F ++ L K + + L PN+ Y+++
Sbjct: 612 AEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671
Query: 599 SL 600
Sbjct: 672 GF 673
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/495 (20%), Positives = 198/495 (40%), Gaps = 84/495 (16%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K+G ++ T ++ + +P +V+ N L+N +++ ++ E+ R G+ P
Sbjct: 322 ARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAP 381
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L H +CK G+ K +L ++ G + D+++Y LI G ++ A +
Sbjct: 382 NKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIR 441
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R +LPD Y LMNGL K+GK+ A + M+ + ++PD Y TL+ + +
Sbjct: 442 DRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRH 501
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL------------------ 400
G + E+K L ++ G+ P ++++G+ K G + +A+
Sbjct: 502 GNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTF 561
Query: 401 -----------NLVVELQRFGVSISRD------IYDYLIVALCQDNRPFAATSLLERIGQ 443
N+ L+ FG+ + ++ Y LI C+ A L +
Sbjct: 562 STIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRS 621
Query: 444 DGYVPSLEIYNELMESLCKCDSVADAL--------------------------------- 470
G PS+ Y+ L+ S CK + A+
Sbjct: 622 HGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAV 681
Query: 471 -------------LLKD---EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ +D M+ + Y ++ C C A+ L ++ML
Sbjct: 682 SREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAF 741
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+ D+ LI+G C+E + + ++ + ++ Y+ + F +G +S+
Sbjct: 742 GLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEA 801
Query: 575 MELQKRFLRLGFAPN 589
+ + ++ +PN
Sbjct: 802 SGILQAMIKGYVSPN 816
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 95/238 (39%), Gaps = 23/238 (9%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
++C +V + LI+ Y + G + + K F G +PS+V+ + L+
Sbjct: 587 QNCKPNVVTYTSLIN-------GYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN---------------G 261
K + + +E M PN F+ L + F N V+
Sbjct: 640 KEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFT-NTKATAVSREPNNLHENSRSMFED 698
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
F ++ +G+ YN ++ C++ + A L M + D V++ L++G+C
Sbjct: 699 FFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGIC 758
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
EG +E + ++ G + Y+ + + EG + E+ +L M+ + P+
Sbjct: 759 LEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPN 816
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 202/425 (47%), Gaps = 6/425 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + ++F+ +K + P+ V+ L++GLLK +D+ V E+M G P
Sbjct: 54 KAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLK 113
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ ++ K G V++ + G PD Y LI CK G+ +A+ LY+
Sbjct: 114 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA 173
Query: 302 YRR----NVLPDLVTYTTLMNGLCKEGKVREAHQLF-HRMVHRGLSPDIVSYNTLIFAYC 356
R +PD+VTYT+L++GLCK G++ EA Q+F V RG PD V+Y ++I C
Sbjct: 174 NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLC 233
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+++E +EM G PD T ++ G+ K + A + ++ + G +S
Sbjct: 234 KLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ ++ LC+ R A + + + G V ++ Y+ LM+ C +V+ A+ L M
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD- 535
+DR +P+L +Y +I C G+ +A +++L+ + PD ++G C D
Sbjct: 354 LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDT 413
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V+ L + + SY+ + + G L +E+ + + G AP+ +
Sbjct: 414 VSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNT 473
Query: 596 MIHSL 600
+I L
Sbjct: 474 LIRWL 478
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 185/371 (49%), Gaps = 5/371 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ F ++ + C+ +D+ LE+ G +PD VTYN I CK R++DAF L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M + LP VTYT L++GL K G++ EA + +MV +G SP + +Y +I K
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE--LQRFGVSISR 415
G+++E++ + +M+GNG PD F +++G K G+ A L E ++ +
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 416 DIYDY--LIVALCQDNRPFAATSLL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
D+ Y LI LC+ R A + + + G++P Y +++ LCK V +
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM +R +P TY ALI F +A + +ML+SG + + ++++G C
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
V +A A ++ + +Y+A+ + F +G++S +EL +R L G PN ++
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364
Query: 593 CKYMIHSLWKG 603
+I L +
Sbjct: 365 YNIIIRGLCRA 375
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 185/408 (45%), Gaps = 6/408 (1%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+F + + G +P V+ N ++GL K +D +Q+ ++M P T T+ L
Sbjct: 25 EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALV 84
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
K G +D+ LE++ E+G P L TY +I K GR+ +A ++ M
Sbjct: 85 DGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCR 144
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFH----RMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD YT L+ GLCK GK EA+ L+ R H PD+V+Y +LI CK G++ E
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILE 204
Query: 364 SKSLL-YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + E + G PD T I+ G K GR+ E++ G Y LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+ A + ++ Q G V S YN +++ LCK VA+A M +R
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 324
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
++ TY AL+ FC G AV L ML+ G P+ ++I G C + KA
Sbjct: 325 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFY 384
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGD-LSKLMELQKRFLRLGFAPN 589
++ D ++NA + + D +S +EL + + G +PN
Sbjct: 385 FEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPN 432
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 169/368 (45%), Gaps = 37/368 (10%)
Query: 182 KVGLIRESFKTFR-KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G I E+ + F + ++ GF P V+ +++GL KL +++ + + EM G P+
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ L F K + K + ++ + G VTYN ++ CK GR+ +A+ +
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + +VTY+ LM+G C EG V A +LF RM+ RG P++VSYN +I C+ GK
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ +++ + PD +T + G L L+ V +
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHG------LCQRLDTVSD--------------- 416
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L E + G P+L Y+ LM+ +C+ + AL + EMV R
Sbjct: 417 -------------GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P + + LI C GR EA+ + E LE PD+ L++G + + +A
Sbjct: 464 VAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERMEEAR 522
Query: 541 ALLGFFAK 548
LL F K
Sbjct: 523 -LLSFHMK 529
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 121/231 (52%), Gaps = 1/231 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K +I ++ + +R+ L G S V+ N +L+GL K + + + + M G
Sbjct: 266 GFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVA 325
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T++ L FC G+V ++ + G +P+LV+YN +I C+ G+L A++ +
Sbjct: 326 TVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYF 385
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKE-GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ +R + PD+ T+ ++GLC+ V + +LF MV +G SP++ SY+ L+ C+
Sbjct: 386 EKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICR 445
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
G ++ + + EM+ G+ PD +++ GR+ AL + EL+R
Sbjct: 446 AGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER 496
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 5/267 (1%)
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
SPD+V++ +I C+E ++ E+ S+L + G PD T + + G K R+ A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ ++ + Y L+ L + R A ++LE++ + G P+L+ Y +++ L
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM----LESGML 517
K V +A + +M+ +P Y ALI C G+ EA +L E + +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFA-KKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD LI+G C + +A + A ++ I D +Y ++ + + G + + E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKG 603
G+ P+ +T +I K
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKA 270
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 216/458 (47%), Gaps = 36/458 (7%)
Query: 179 AYVKVGLIRESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A V G + E+ R+ D P+ S N ++ G+ + +V++EM +
Sbjct: 169 ACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL 228
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N + K GD++ +++ G P+ +TYN L+S C+ GR+ + L
Sbjct: 229 PNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 288
Query: 298 YRIMYRRNVLPDLVTYTTL-----------------------------------MNGLCK 322
M + ++PD TY+ L +NGLCK
Sbjct: 289 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCK 348
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+GKV A ++ +V+ GL P V YNTLI YC+ G+++ + S +M I PD T
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 408
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K R+ +A +L++E+Q GV+ + + ++ LI A + + +L +
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G P++ Y ++ + CK + +A+ + D+M +++ P+ Y A+I + G +
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 528
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L+++M +G+ P +LI G C + +++AE ++ + I D SYN +
Sbjct: 529 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 588
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ K ++LQ+R + G T +I L
Sbjct: 589 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 626
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 183/388 (47%), Gaps = 1/388 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ SCN LL LL L + + + G P+T +N GD+ + G
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182
Query: 263 LEKIEEEGF-DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ +G P+ +YN +I+ + GR DA ++ M R VLP+ +TY T+++G
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K G + L +MV GL P+ ++YN L+ C+ G+M E+ +LL EM + PD F
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I+ G + G + L+L + + GV+I L+ LC+D + A +L+ +
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G VP+ IYN L+ C+ + A +M R+IKP TY ALI C R
Sbjct: 363 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A L+ EM ++G+ P + LI+ Y + K +L + + SY ++
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 482
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPN 589
N F ++G + + + + PN
Sbjct: 483 VNAFCKNGKIPEAVAILDDMFHKDVLPN 510
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 203/424 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G + F + + G +P+ ++ N LL+GL + + + + +EM + P
Sbjct: 240 GHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 299
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++IL +NGD + K + G T + L++ CK G+++ A +
Sbjct: 300 DGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 359
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++P V Y TL+NG C+ G++ A F +M R + PD ++YN LI CK
Sbjct: 360 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 419
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ LL EM NG+ P T ++ YG+ G+L ++ E+Q G+ + Y
Sbjct: 420 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 479
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ A C++ + A ++L+ + +P+ ++YN ++++ + A +L ++M
Sbjct: 480 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 539
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I PS+ TY LI C + EA +++ + ++PD+ LI+ C +++K
Sbjct: 540 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 599
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K +Y+ + + G L ++ L ++ ++ P+N M+
Sbjct: 600 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVE 659
Query: 599 SLWK 602
+ K
Sbjct: 660 AYSK 663
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 175/362 (48%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F K+L G +C+ LLNGL K + +V + + G+ P +N L + +C+
Sbjct: 324 FGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 383
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G+++ +++ PD +TYN LI+ CK R+ +A L M V P + T
Sbjct: 384 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 443
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ TL++ + G++ + + M GL P++VSY +++ A+CK GK+ E+ ++L +M
Sbjct: 444 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ P+ I+ Y + G A LV +++ G+S S Y+ LI LC ++
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 563
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A ++ + +P YN L+ + C ++ AL L+ M IK ++ TY LI
Sbjct: 564 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 623
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G GR E L +M+++ ++P + I +++ Y + KAE L +K
Sbjct: 624 SGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 683
Query: 553 YD 554
+D
Sbjct: 684 HD 685
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 207/432 (47%), Gaps = 12/432 (2%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ P N ++ +C + + G++ L + + ++P + I L DS +
Sbjct: 260 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319
Query: 109 ALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
L+ F +KN + I + + ++++ L + K S A ++L LV P V ++
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCS--ILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRV-IYN 375
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y + G + +F TF + +P ++ N L+NGL K I +
Sbjct: 376 TLIN-------GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 428
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM G+ P TFN L + + G ++K L +++E G P++V+Y ++++++CK
Sbjct: 429 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 488
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +A + M+ ++VLP+ Y +++ + G +A L +M G+SP IV+
Sbjct: 489 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 548
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN LI C + ++ E++ ++ + + + PD + ++ G + AL+L +
Sbjct: 549 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 608
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
++G+ + Y LI L R L +++ Q+ VPS I+N ++E+ K +
Sbjct: 609 KYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 668
Query: 468 DALLLKDEMVDR 479
A L+ EM+ +
Sbjct: 669 KAEDLRKEMLQK 680
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 15/307 (4%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R LP L + L+ L G+ + + F + G PD ++N + A G + E
Sbjct: 119 RAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGE 178
Query: 364 SKSLLYEMMGNGI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +L M +G P+ F+ +++ G + GR A+ + E+ V + Y+ +I
Sbjct: 179 AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 238
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+ A SL +++ G P+ YN L+ LC+ + + L DEM + +
Sbjct: 239 DGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 298
Query: 483 PSLSTYRALICCFCGIGRSGEA---VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P TY L F G+ R+G++ +SL + L++G+ C +L+NG C + V+ A
Sbjct: 299 PDGFTYSIL---FDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIA 355
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDL----SKLMELQKRFLRLGFAPNNLTCKY 595
E +L + YN + N + + G+L S +++ R ++ P+++T
Sbjct: 356 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK----PDHITYNA 411
Query: 596 MIHSLWK 602
+I+ L K
Sbjct: 412 LINGLCK 418
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 195/405 (48%), Gaps = 1/405 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + R+T S NF L L + + + +VY ++ + G+ P+T T+N +
Sbjct: 16 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+CK GD+ + + + E G +P+ T N L+ YC+ G L A +L+ +M
Sbjct: 76 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
+ +YT L+ GLC VR+A LF M G SP++ ++ LI CK G++ +++ L
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M NG+ P T ++ GY K GR+ AL + +++ G Y+ LI LC
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC- 254
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D + A LL ++G+ P++ + L+ C + DAL +K++M+ K L
Sbjct: 255 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI R EA L++E+ +G++P+ +I+GYC V+ A +L
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ + +YN++ +D L K M L + + G PN +T
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 419
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 189/405 (46%), Gaps = 5/405 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF P++V+ L+NG D ++ +M + F L + K + +
Sbjct: 272 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 331
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L +I G P+++TY ++I YCK G+++ A + ++M R P+ TY +LM G
Sbjct: 332 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 391
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L K+ K+ +A L +M G+ P++++Y TL+ C E + L M NG+ PD
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 451
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ-DNRPFAATSLL 438
++ K GR A + +V R GV++++ Y LI + N FAAT L+
Sbjct: 452 EHAYAVLTDALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAAT-LI 507
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
ER+ +G P Y+ L+ +LCK + +AL + D+M R IK ++ Y LI
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 567
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ A + +EM SG P + V IN YC E + AE L+ ++ D +Y
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N + + G + + KR + PN T ++ L KG
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKG 672
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 198/442 (44%), Gaps = 19/442 (4%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ VK + ++ K G P++++ LL G + D ++++E M + G+
Sbjct: 390 YGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLK 449
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ H + +LT CK G ++ F I +G V Y TLI + K G + A L
Sbjct: 450 PDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 506
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD TY+ L++ LCK+ ++ EA + +M RG+ I +Y LI +
Sbjct: 507 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 566
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
EGK +K + EM +G P T + + Y KEGRL A +L+++++R GV+
Sbjct: 567 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 626
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD-----SVADALL- 471
Y+ LI A S L+R+ P+ Y L++ L K + SV + +
Sbjct: 627 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 686
Query: 472 ----------LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
L + MV + P+++TY +LI FC GR EA L+D M G+ P+
Sbjct: 687 NLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNED 746
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
I +LI C K KA + + ++ ESY + +GD K+ L
Sbjct: 747 IYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 806
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
L LG+ + + K + L K
Sbjct: 807 LELGYNHDEVAWKILNDGLLKA 828
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 21/283 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+Y K G + ++ K G P +V+ N L++G + ID+ + + M P
Sbjct: 598 SYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEP 657
Query: 239 NTHTFNILTHVFCKNG----------------DVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
N T+ +L K ++D LE++ + G +P + TY++LI
Sbjct: 658 NYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLI 717
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK GRL +A L M + + P+ YT L+ C +A M G
Sbjct: 718 AGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQ 777
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P + SY L+ C EG ++ KSL +++ G D +I+ G K G + +
Sbjct: 778 PQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQM 837
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+ +++ IS Y AL + ++SL+ + ++
Sbjct: 838 LSIMEKRYCCISSQTY-----ALVTNKMHEVSSSLVSEVREEA 875
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 3/376 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + L+ + F K +G P++++ + +++GL K + Q +++ EEM + G P
Sbjct: 875 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 934
Query: 239 NTHTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +T L H CK G ++ FL+ I + + P++ TY +IS YCK+ +L+ A L
Sbjct: 935 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 994
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M + ++P+ TYTTL++G CK G +A++L M + G P+ +YN+++ CK
Sbjct: 995 FERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 1054
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ +E+ LL N I D T I++ K + AL + ++ + G +
Sbjct: 1055 RGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL 1114
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI A C+ N + L + + + G P+ E Y ++ C+ V+ A+ +M
Sbjct: 1115 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMS 1174
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV-LINGYCMEKDV 536
D P +Y ALI C R EA L D M++ G+ P ++ RV L YC +D
Sbjct: 1175 DHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP-CEVTRVTLTYEYCKTEDF 1233
Query: 537 NKAEALLGFFAKKFQI 552
A +L KK I
Sbjct: 1234 ASAMVILERLNKKLWI 1249
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/508 (22%), Positives = 238/508 (46%), Gaps = 29/508 (5%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKM--LCELVEL 155
LL + S+ AL+FF W KF + M++ +C + L
Sbjct: 713 ALLASEEGSMVALSFFYWA--------------------VGFPKFRYFMRLYIVCTM-SL 751
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
V C +++ +++ C + ++G ++E+ + G + N ++
Sbjct: 752 VGKC--NLERAHEVVECMVG---VFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVA 806
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++ ++ V++EM G+ P++ T+ + +C+NG+V + + ++ ++ E GF D
Sbjct: 807 AEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDN 866
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T +I+++C+K +N A + + + + + P+L+ Y+++++GLCK G V++A +L
Sbjct: 867 ATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEE 926
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEG 394
MV G P++ ++ +LI CK+G + + L +++ + Y P+ T ++ GY KE
Sbjct: 927 MVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEE 986
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+L A L ++ G+ + + Y LI C+ A L+E + +G+ P+ YN
Sbjct: 987 KLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYN 1046
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+++ LCK +A L + I+ TY LI C +A+ +++M +
Sbjct: 1047 SIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKV 1106
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G PD + LI +C + + +E L K E+Y ++ + + +S
Sbjct: 1107 GFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLA 1166
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ ++ G AP++++ +I L K
Sbjct: 1167 VKFFQKMSDHGCAPDSISYGALISGLCK 1194
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 5/355 (1%)
Query: 182 KVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G +F+ F K + ++P++ + +++G K + + ++E M G+ PNT
Sbjct: 948 KKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNT 1007
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L CK G+ K +E + EGF P+ TYN+++ CK+GR +AF L
Sbjct: 1008 NTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNT 1067
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
++ + D VTYT L++ CK + +A ++M G PDI Y TLI A+C++
Sbjct: 1068 GFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM 1127
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M++S+ L E++ G+ P T ++ GY +E ++ A+ ++ G + Y
Sbjct: 1128 MKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGA 1187
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+++R A L + + G P L CK + A A+++ + + N
Sbjct: 1188 LISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL---N 1244
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
K + T LI C + A ++L+ + D ++ N C+E +
Sbjct: 1245 KKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVD-RVTLAAFNTACIESN 1298
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 183/359 (50%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK ++ ++ F + L G PS+V+ N L+N + + W+V+++M I PN
Sbjct: 149 VKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNV 208
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ + + C+ + G +++E G P+L TYN L+SS+ K+ + A Y
Sbjct: 209 VTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYD 268
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + ++P+ V +TTL++GLCK ++ EA +F M ++P + YN+LI + G
Sbjct: 269 LLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
QE+ + E++ + PD FTC I+V+G G++ A + +Q+ G++++ Y+
Sbjct: 329 AQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ A R+ + G P++ Y+ L++ K + A+ + EMV +
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P++ TY ALI G A L EM E G+ ++ VL++G C E V A
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDA 507
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 190/423 (44%), Gaps = 40/423 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGIC 237
A ++ L E+ F + ++ P++ +CN +L+GL+K + + + W++++EM GR
Sbjct: 115 ALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEMLGR---- 167
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
G P +VTYNTLI++ +G + A+ +
Sbjct: 168 --------------------------------GMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M R + P++VTYTT++ LC+E + +A LF M G+ P++ +YN L+ ++ K
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ + Y+++ G+ P+ ++ G K R+ A N+ +++ R+ V+ + +
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI + A + + I + P + ++ LC + A + M
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
I + + Y LI +C G EA+ M E G+ P+ LI+G+ ++
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A A+ K + +Y A+ + A++GD+ LQK G N +T ++
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 598 HSL 600
L
Sbjct: 496 DGL 498
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 159/347 (45%), Gaps = 17/347 (4%)
Query: 161 HSVDVFQDLISC---TEDCNWAYVKVGL-----IRESFKTFRKTLDVGFQPSIVSCNFLL 212
H++ + DL+ C D + + GL I E+ F P++ N L+
Sbjct: 261 HALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLI 320
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G + + ++E+ R + P+ T +I+ C G + FLE +++ G
Sbjct: 321 HGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIA 380
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ YN LI YCK G L++A M V P++VTY++L++G K G++ A +
Sbjct: 381 LNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAI 440
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ MV +G+ P++V+Y LI + K G M + L EM GIY + T ++V G +
Sbjct: 441 YTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCR 500
Query: 393 EGRLLSALNLVVELQ-----RFGVSISRDI-YDYLIVALCQDNRPFAATSLLERIGQDGY 446
E R+ A+ ++E SI+ + Y LI L D + A + G
Sbjct: 501 ENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGM 560
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
VP Y ++ LC V +A++L +MV +KP T A++C
Sbjct: 561 VPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP---TKCAMVC 604
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 163/330 (49%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P L N ++ K L + L+ M R ++P +VTY TL+N +G V +A ++
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ +MV R + P++V+Y T+I+A C+E + +++ L EM G+ P+ +T ++ + K
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ AL +L + G+ + I+ LI LC+ NR A ++ + + P++ +
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPV 315
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ + +AL E++ + ++P T ++ C G+ A ++ M
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+SG+ ++ VLI+ YC ++++A ++ + +Y+++ + +++G++
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
M + + G PN +T +IH K
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAK 465
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 2/227 (0%)
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P C I+ G K L L E+ G+ S Y+ LI A A +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+++ P++ Y ++ +LC+ D + DA L EM + ++P+L TY AL+
Sbjct: 196 WDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT-E 556
A+ ++L+ G++P+ I LI+G C + +A+ + ++++ T
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIF-LDMPRYEVAPTVP 314
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
YN++ + G + + + +R P+ TC ++ L G
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDG 361
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 202/400 (50%), Gaps = 5/400 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS+ N LL +K ++ +Y++M GI P T+TFN+L C + VD
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+++ E+G P+ T+ L+ YCK G + L M VLP+ V Y T+++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN---GI-Y 377
+EG+ ++ ++ +M GL PDIV++N+ I A CKEGK+ ++ + +M + G+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P++ T ++++G+ K G L A L ++ S Y+ + L + + A ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L+++ G PS+ YN LM+ LCK ++DA + M + P TY L+ +C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+G+ A SL+ EM+ + LP++ C +L++ +++AE LL +K DT +
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAP-NNLTCKYM 596
N + + G+L K +E+ K G A NL Y+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 255/585 (43%), Gaps = 81/585 (13%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV- 107
+ LP N IV C + DS + + + L+P + SR+ C+ V
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN-SRISALCKEGKVL 269
Query: 108 SALTFFNWVKNDLEI---KPTSSNYCLIVHILAWNNKFSFAMKMLCE--LVELVKDCPHS 162
A F+ ++ D + +P S Y L+ +K C+ L+E K S
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLM-------------LKGFCKVGLLEDAKTLFES 316
Query: 163 VDVFQDLISCTEDCNW--AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ DL S W V+ G E+ ++ D G PSI S N L++GL KL
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + M R G+CP+ T+ L H +C G VD L+++ P+ T N
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ S K GR+++A L R M + D VT +++GLC G++ +A ++ M G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 341 LS-----------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ PD+++Y+TL+ CK G+ E+K+L EMMG +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD+ I + + K+G++ SA ++ ++++ G S + Y+ LI+ L N+ F L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
++ + + G P++ YN ++ LC+ + V DA L DEM+ +NI P++ +++ LI FC
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+ + E+ E+ + IC + E L
Sbjct: 677 V----PDFDMAQEVFETAV----SIC-------------GQKEGL--------------- 700
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y+ +FN G L K EL + L GF K ++ SL K
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 226/524 (43%), Gaps = 39/524 (7%)
Query: 110 LTFFNWVKNDL---EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+ F +W+ D+ I P + + L++ L ++ A ++ E+ E K C + F
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE--KGCKPNEFTF 185
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
L+ Y K GL + + G P+ V N +++ + D +
Sbjct: 186 GILVR-------GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF----DPDLVTYNTLI 282
+ E+M G+ P+ TFN CK G V + +E + + P+ +TYN ++
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+CK G L DA L+ + + L L +Y + GL + GK EA + +M +G+
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P I SYN L+ CK G + ++K+++ M NG+ PD T ++ GY G++ +A +L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E+ R + + L+ +L + R A LL ++ + GY N +++ LC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 463 CDSVADAL-----------------------LLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ A+ L+ D +++ N P L TY L+ C G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA +L EM+ + PDS + I+ +C + ++ A +L KK E+YN
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ + ++ L G +PN T I L +G
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 170/358 (47%), Gaps = 30/358 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--------GR 233
K+G I E+ + RK + G+ V+CN +++GL +D+ ++ + M G
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 234 IG---------------ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+G P+ T++ L + CK G + ++ E PD V Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N I +CK+G+++ AF + + M ++ L TY +L+ GL + ++ E H L M
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+G+SP+I +YNT I C+ K++++ +LL EMM I P+ F+ + +++ + K +
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----VP 678
Query: 399 ALNLVVELQRFGVSI---SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
++ E+ VSI +Y + L + AT LLE + G+ +Y +
Sbjct: 679 DFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L+ESLCK D + A + +M+DR + +I +G EA S D+M+E
Sbjct: 739 LVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+ LV D + DLI+ + N K G E+ F + + QP V+ N +
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLN-GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+ K I ++V ++M + G + T+N L + +++G +++++E+G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---------- 322
P++ TYNT I C+ ++ DA L M ++N+ P++ ++ L+ CK
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 323 ------------------------EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
G++ +A +L ++ RG Y L+ + CK+
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+++ + +L++M+ G D ++ G GK G
Sbjct: 747 DELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 20/257 (7%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+++P S Y + +H K S A ++L ++ + K C S++ + LI N +
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK--KGCHKSLETYNSLILGLGIKNQIF 611
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
GL+ E + G P+I + N + L + ++ + +EM + I PN
Sbjct: 612 EIHGLMDE-------MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKI-----EEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+F L FCK D D E ++EG Y+ + + G+L A
Sbjct: 665 FSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKAT 718
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L + R Y L+ LCK+ ++ A + H+M+ RG D + +I
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Query: 356 CKEGKMQESKSLLYEMM 372
K G +E+ S +MM
Sbjct: 779 GKMGNKKEANSFADKMM 795
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 183/359 (50%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK ++ ++ F + L G PS+V+ N L+N + + W+V+++M I PN
Sbjct: 149 VKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNV 208
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ + C+ + G +++E G P+L TYN L+SS+ K+ + A Y
Sbjct: 209 VTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYD 268
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + ++P+ V +TTL++GLC+ ++ EA +F M ++P + YN+LI + G
Sbjct: 269 LLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGY 328
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
QE+ + E++ G+ PD FTC I+V+G G++ A + +Q+ G++++ Y+
Sbjct: 329 AQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNV 388
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ A R+ + G P++ Y+ L++ K + A+ + EMV +
Sbjct: 389 LIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKG 448
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P++ TY ALI G A L EM E G+ ++ VL++G C E V A
Sbjct: 449 VEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDA 507
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 191/423 (45%), Gaps = 40/423 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGIC 237
A ++ L E+ F + ++ P++ +CN +L+GL+K + + + W++++EM GR
Sbjct: 115 ALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEMLGR---- 167
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
G P +VTYNTLI++ +G + A+ +
Sbjct: 168 --------------------------------GMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M R + P++VTYTT++ LC+E + +A LF M G+ P++ +YN L+ ++ K
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ + Y+++ G+ P+ ++ G + R+ A N+ +++ R+ V+ + +
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPV 315
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI + A + + I + G P + ++ LC + A + M
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQ 375
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
I + + Y LI +C G EA+ M E G+ P+ LI+G+ ++
Sbjct: 376 QSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEME 435
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A A+ K + +Y A+ + A++GD+ LQK G N +T ++
Sbjct: 436 IAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLV 495
Query: 598 HSL 600
L
Sbjct: 496 DGL 498
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 17/347 (4%)
Query: 161 HSVDVFQDLISC---TEDCNWAYVKVGL-----IRESFKTFRKTLDVGFQPSIVSCNFLL 212
H++ + DL+ C D + + GL I E+ F P++ N L+
Sbjct: 261 HALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLI 320
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G + + ++E+ R G+ P+ T +I+ C G + FLE +++ G
Sbjct: 321 HGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIA 380
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ YN LI YCK G L++A M V P++VTY++L++G K G++ A +
Sbjct: 381 LNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAI 440
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ MV +G+ P++V+Y LI + K G M + L EM GIY + T ++V G +
Sbjct: 441 YTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCR 500
Query: 393 EGRLLSALNLVVELQ-----RFGVSISRDI-YDYLIVALCQDNRPFAATSLLERIGQDGY 446
E R+ A+ ++E SI+ + Y LI L D + A + G
Sbjct: 501 ENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGM 560
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
VP Y ++ LC V +A++L +MV +KP T A++C
Sbjct: 561 VPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP---TKCAMVC 604
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 98/227 (43%), Gaps = 2/227 (0%)
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P C I+ G K L L E+ G+ S Y+ LI A A +
Sbjct: 136 PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEV 195
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+++ P++ Y ++ +LC+ D + DA L EM + ++P+L TY AL+
Sbjct: 196 WDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFK 255
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT-E 556
A+ ++L+ G++P+ I LI+G C + +A+ + ++++ T
Sbjct: 256 RDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIF-LDMPRYEVAPTVP 314
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
YN++ + G + + + +R G P+ TC ++ L G
Sbjct: 315 VYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDG 361
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 195/396 (49%), Gaps = 38/396 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++GL+ E+ FR+ + P++ +CN +L+GL+K W++++EM R G+ P
Sbjct: 128 ALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVP 184
Query: 239 NTHTFNILTHV-----------------------------------FCKNGDVDKVNGFL 263
+ T+N L + C+ G +
Sbjct: 185 SVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLF 244
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ ++E G P+ TYN L+S +C++ +N A LY+ + + + P+ V +TTL++G CK
Sbjct: 245 DAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKA 304
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+ EA +F M G++P + YN+L+ + G QE+ +L EM G+ PD FTC
Sbjct: 305 KRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTC 364
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+V+G G++ A + +Q GV+++ Y+ LI C+ A + R+ +
Sbjct: 365 SIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTE 424
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P++ Y+ L++ K + A+ + EMV + I+P++ TY ALI G
Sbjct: 425 VGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 484
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
A L EM+E+G+ P++ VL++G C E V +A
Sbjct: 485 AFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEA 520
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 155/323 (47%), Gaps = 17/323 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K E+ F + G P++ N L++G + + +Y+EM R+G+CP
Sbjct: 300 GFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCP 359
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T +I+ C G + + FL+ ++E+G + + YN LI YC+ G L +A
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATC 419
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P++V+Y++L++G K GK++ A ++ MV +G+ P++V+Y LI + K
Sbjct: 420 TRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKN 479
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS------ 412
G + + L EM+ NGI P+ T ++V G +E R+ A+ V+E S
Sbjct: 480 GGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVF 539
Query: 413 ----ISRD-------IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
I + IY LI L D + A L + + G +P Y L+ C
Sbjct: 540 SNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQC 599
Query: 462 KCDSVADALLLKDEMVDRNIKPS 484
V +A++L +M+ +KP+
Sbjct: 600 MLGYVLNAMMLYADMMKIGVKPT 622
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 181/423 (42%), Gaps = 17/423 (4%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + + + + P++V+ ++ L + CI ++++ M G+ PN +T+
Sbjct: 200 GTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTY 259
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L C+ DV+ +++ + G +P+ V + TLI +CK R ++A ++ M R
Sbjct: 260 NVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPR 319
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V P + Y +LM+G + G +EA L+ M GL PD + + ++ C G+M
Sbjct: 320 FGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHV 379
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L + +G+ + ++ Y + G L AL + G+ + Y LI
Sbjct: 380 ADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLID 439
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ + A ++ + G P++ Y L+ K + A L EM++ I P
Sbjct: 440 GHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISP 499
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDE-----------------MLESGMLPDSQICRVL 526
+ T L+ C R EAV + E + E ++P+S I L
Sbjct: 500 NAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTL 559
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I G ++ +A L + K I D+ +Y + G + M L +++G
Sbjct: 560 IYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGV 619
Query: 587 APN 589
P
Sbjct: 620 KPT 622
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 17/219 (7%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y ++G + E+ T + +VG +P++VS + L++G K + +Y EM GI PN
Sbjct: 406 YCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPN 465
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L H KNG +D +++ E G P+ +T + L+ C++ R+ +A
Sbjct: 466 VVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVM 525
Query: 300 -----------------IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ ++P+ V Y TL+ GL +G+ EA +LF M G+
Sbjct: 526 EYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMI 585
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
PD +Y LI C G + + L +MM G+ P +
Sbjct: 586 PDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTRY 624
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
L + RP A L + + + G VPS+ YN L+ + +VA A + D+MV + I P
Sbjct: 160 GLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDP 219
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ TY +IC C G G+A L D M E+GM P+ VL++G+C DVN A L
Sbjct: 220 NVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLY 279
Query: 544 --------------------------------GFFAK--KFQIYDT-ESYNAVFNMFAED 568
G F + +F + T YN++ +
Sbjct: 280 QELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRS 339
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
G+ + + L + RLG P+ TC ++ L G
Sbjct: 340 GNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDG 374
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 199/419 (47%), Gaps = 9/419 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ ++ ++ ++A NKF + + ++ L H + F LI C + +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL--GISHDLYSFTILIHC-------FCRC 652
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ + K + +GF+PSIV+ LLNG + N + + + M G PN +
Sbjct: 653 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 712
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CKN D++ +E++G D VTYNTLIS GR DA L R M +
Sbjct: 713 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 772
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P+++ +T L++ KEG + EA L+ M+ R + P++ +YN+LI +C G + +
Sbjct: 773 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 832
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G +PD T ++ G+ K R+ + L E+ G+ Y+ LI
Sbjct: 833 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 892
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A + R+ G P + YN L++ LC + AL++ +++ +
Sbjct: 893 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 952
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +I C + EA L + G+ PD+ +I+G C + +A+ L
Sbjct: 953 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 194/420 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F F + + PSIV LL L + ++M GI + ++F IL
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+ + L K+ + G++P +VT+ +L+ +C R+ DAF L +M +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y TL++GLCK G++ A +L + M +GL D+V+YNTL+ C G+ ++ +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +MM I PD T ++ + K+G L A L E+ + V + Y+ +I LC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R + A + + G P++ YN L+ CK V + + L M + T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI +C +G+ A+ + M+ + PD +L++G C+ ++ A
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + +YN + + + + K EL R G P+ T MI L K R+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 195/421 (46%), Gaps = 1/421 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F F + L PSIV +L + K+N D +Y +M +GI + ++F IL
Sbjct: 587 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 646
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+ + L K+ + GF P +VT +L++ +C+ R +A L M +
Sbjct: 647 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 706
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y T++NGLCK + A ++F+ M +G+ D V+YNTLI G+ ++ L
Sbjct: 707 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 766
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M+ I P+ ++ + KEG LL A NL E+ R V + Y+ LI C
Sbjct: 767 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 826
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + G P + YN L+ CK V D + L EM + + T
Sbjct: 827 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 886
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI +C G+ A + + M++ G+ PD +L++ C + KA ++
Sbjct: 887 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 946
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WKGMER 606
K D +YN + L + L + R G P+ + MI L KG++R
Sbjct: 947 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 1006
Query: 607 K 607
+
Sbjct: 1007 E 1007
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 190/390 (48%), Gaps = 9/390 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
++ +++H ++ SFA+ +L ++++L + S+ F L+ + V I
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLH-------GFCLVNRIG 158
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F + G++P++V N L++GL K ++ ++ EM + G+ + T+N L
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C +G L + + +PD+VT+ LI + K+G L++A LY+ M + +V
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+ VTY +++NGLC G++ +A + F M +G P++V+YNTLI +CK + E L
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M G D FT ++ GY + G+L AL++ + V+ + L+ LC
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ +A + + + + YN ++ LCK D V A L + +KP T
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGML 517
Y +I C G EA L+ M E G++
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 11/385 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESF--KTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
H + F LI C C+ R SF K + +G++PSIV+ LL+G +
Sbjct: 104 HDLYSFTILIHCFCRCS---------RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N I + + M + G PN +N L CKNG+++ L ++E++G D+VTY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NTL++ C GR +DA + R M +R++ PD+VT+T L++ K+G + EA +L+ M+
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+ P+ V+YN++I C G++ ++K M G +P+ T ++ G+ K +
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ L + G + Y+ LI CQ + A + + P + + L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LC + AL+ D+M + + Y +I C + +A L + G+ P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 519 DSQICRVLINGYCMEKDVNKAEALL 543
D++ ++I G C +A+ L+
Sbjct: 455 DARTYTIMILGLCKNGPRREADELI 479
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 147/275 (53%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + R + P+++ L++ +K + + +Y+EM R + PN T+
Sbjct: 758 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FC +G + + + +G PD+VTYNTLI+ +CK R+ D L+ M
Sbjct: 818 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 877
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++ D TY TL++G C+ GK+ A ++F+RMV G+SPDIV+YN L+ C GK+++
Sbjct: 878 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 937
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ ++ + + D T II+QG + +L A L L R GV Y +I
Sbjct: 938 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 997
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
LC+ A L R+ +DG++PS IY+E +
Sbjct: 998 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + S L++ + + + V +M ++G P+ TF L H FC +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ + + G++P++V YNTLI CK G LN A L M ++ + D+VTY TL+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC G+ +A ++ M+ R ++PD+V++ LI + K+G + E++ L EM+ + + P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I+ G GRL A + G + Y+ LI C+ L +
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R+ +G+ + YN L+ C+ + AL + MV R + P + T+ L+ C G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
A+ D+M ES ++I+G C V KA L + D +Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 560 AVFNMFAEDGDLSKLMELQKR 580
+ ++G + EL +R
Sbjct: 461 IMILGLCKNGPRREADELIRR 481
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 142/289 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + V+ N L++GL ++ +M + I PN F L F K G++ +
Sbjct: 739 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 798
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ P++ TYN+LI+ +C G L DA Y++ +M + PD+VTY TL+ G
Sbjct: 799 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 858
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK +V + +LF M ++GL D +YNTLI YC+ GK+ ++ + M+ G+ PD
Sbjct: 859 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 918
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I++ G++ AL +V +LQ+ + + Y+ +I LC+ ++ A L
Sbjct: 919 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 978
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ + G P Y ++ LC+ +A L M + PS Y
Sbjct: 979 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 1027
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 12/297 (4%)
Query: 118 NDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
N++E K ++ Y ++ L ++ ++S A +ML ++++ + V F LI
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK--RSINPDVVTFTALID--- 254
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+VK G + E+ + +++ + P+ V+ N ++NGL + + ++ M
Sbjct: 255 ----VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G PN T+N L FCK VD+ +++ EGF+ D+ TYNTLI YC+ G+L A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
++ M R V PD++T+ L++GLC G++ A F M IV+YN +I
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
CK K++++ L + G+ PD T I++ G K G A L+ ++ G+
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R DAF L+ M LP +V +T L+ + +M G+S D+ S+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI +C+ ++ + S+L +MM G P T ++ G+ R+ A +LV+ + +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G + +Y+ LI LC++ A LL + + G + YN L+ LC +DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ +M+ R+I P + T+ ALI F G EA L EM++S + P++ +ING
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
CM + A+ A K + +YN + + F + + + M+L +R GF +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 590 NLTCKYMIHS 599
T +IH
Sbjct: 351 IFTYNTLIHG 360
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 160/336 (47%), Gaps = 9/336 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++ L N + + A+++L E+ + K V + L++
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEK--KGLGADVVTYNTLLT-------GLCY 223
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G ++ + R + P +V+ L++ +K +D+ ++Y+EM + + PN T
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + + C +G + + + +G P++VTYNTLIS +CK +++ L++ M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
D+ TY TL++G C+ GK+R A +F MV R ++PDI+++ L+ C G+++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +M + Y I++ G K ++ A L L GV Y +I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ LC++ A L+ R+ ++G + + ++ +E
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLE 499
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 70/345 (20%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +DAF L+ M + +P +V +T ++ + K K L+H+M + G+S D+ S+
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI +C+ ++ + +LL +MM G P T ++ G+
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF------------------- 684
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK------- 462
CQ NR A SL++ + G+VP++ IYN ++ LCK
Sbjct: 685 ----------------CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 728
Query: 463 -------------CDSV---------------ADALLLKDEMVDRNIKPSLSTYRALICC 494
D+V DA L +MV R I P++ + ALI
Sbjct: 729 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 788
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F G EA +L EM+ ++P+ LING+C+ + A+ + K D
Sbjct: 789 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 848
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+YN + F + + M+L G + T +IH
Sbjct: 849 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 893
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWAYVKVGL 185
Y ++H K + A K+ +V DC S D+ + L+ C CN ++ L
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMV----DCGVSPDIVTYNILLDCL--CNNGKIEKAL 939
Query: 186 IR-ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
+ E + + +DV I++ N ++ GL + + + + W ++ + R G+ P+ +
Sbjct: 940 VMVEDLQ--KSEMDV----DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 993
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ C+ G + + +++E+GF P Y+ + +
Sbjct: 994 TMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 1034
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 202/407 (49%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
IR + + K G P++V+ + GL K+ W++ + + R N H FN
Sbjct: 226 IRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNA 285
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + C+ G +D+ + ++++ G PD+ +Y+ LI +C+KGR++ A +++ M
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+LP++ +Y+ L++G CKEG+V +A ++F M + G+ PD+ SY+ LI +C++G M +
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAI 405
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
EM N P F +++GY K + +AL +Q+ G+ ++++
Sbjct: 406 KFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIY 465
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ A +L E+ ++G + YNE + +C+ AL L M+ RN+ P +
Sbjct: 466 CRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDV 525
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y LI CF S +AV L +M + G+ + + +LIN + + ++ A L
Sbjct: 526 VNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG 585
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ D +Y ++ F G++++ L R G +PN +T
Sbjct: 586 MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVT 632
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 207/443 (46%), Gaps = 46/443 (10%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
ELV L+ D S VF LI + ++ + F + D G + +I+SCNF
Sbjct: 124 ELVSLLLDVEKSNVVFDMLIK-------VFASNSMLEHANYVFVRAKDDGIELNIMSCNF 176
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK----NGDVDKVNGFLEKI 266
LL L++ N +D ++E + + G PN HT+ I+ + FC+ + D+ + + L KI
Sbjct: 177 LLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKI 236
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G P++VTY T I CK G A+ L + + R+N + + ++ GLC+ G +
Sbjct: 237 YMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGIL 296
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA ++F M + G+ PD+ SY+ LI +C++G++ ++ + EM +GI P+ ++ I+
Sbjct: 297 DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSIL 356
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEGR+ AL + E++ G I D+Y Y I
Sbjct: 357 IDGFCKEGRVDKALEVFEEMKNSG--ILPDVYSYSI------------------------ 390
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L++ C+ + A+ +EM N PS Y +LI + + A+
Sbjct: 391 ---------LIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALK 441
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
M + GM PD+ C +++ YC + D NKA AL F + ++ SYN +
Sbjct: 442 EFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC 501
Query: 567 EDGDLSKLMELQKRFLRLGFAPN 589
K ++L L+ P+
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPD 524
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 172/365 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + ++ + F++ + G P+I S + L++G K +D+ +V+EEM GI P
Sbjct: 324 GFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILP 383
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++++IL FC+ GD+D F E++ F P Y +LI Y K + +A +
Sbjct: 384 DVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEF 443
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
RIM + + PD + +++ C++ +A L + G+ + SYN I C+
Sbjct: 444 RIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRG 503
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ LL M+ + PD ++ + K A+ L +++ + G++ + Y
Sbjct: 504 SVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTY 563
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI D + A L + + + P Y L+ C + A L DEM
Sbjct: 564 TILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSR 623
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P++ TY I + + ++ +A L ++M E G+ PD + +LI +C ++N+
Sbjct: 624 EGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNR 683
Query: 539 AEALL 543
AEAL
Sbjct: 684 AEALF 688
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 191/400 (47%), Gaps = 1/400 (0%)
Query: 202 QPSIVSC-NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
QP C N ++ GL + +D+ +V++EM GI P+ ++++IL FC+ G VD+ +
Sbjct: 276 QPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQAS 335
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+++ G P++ +Y+ LI +CK+GR++ A ++ M +LPD+ +Y+ L++G
Sbjct: 336 EVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGF 395
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C++G + A + + M SP +Y +LI Y K + + M G++PDT
Sbjct: 396 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDT 455
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
C I+ Y ++ AL L + Q GV + Y+ I +C+ + P A LL
Sbjct: 456 IACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPV 515
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + +P + Y+ L+ K + A++L +M I ++ TY LI F +
Sbjct: 516 MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCK 575
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L M ES + PD L+ G+C ++ +A AL +++ + +Y
Sbjct: 576 MDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTC 635
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
N + + ++ +L ++ G P+ + +I +
Sbjct: 636 FINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAF 675
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 4/346 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + + K + + F PS + L+ G K + + M ++G+ P
Sbjct: 394 GFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWP 453
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T N + ++C+ D +K EK +E G + +YN I C+ A L
Sbjct: 454 DTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLL 513
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M +RNVLPD+V Y+TL++ K +A LF +M G++ ++ +Y LI + +
Sbjct: 514 PVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISD 573
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
KM + L M + +YPD +V G+ G + A L E+ R G S + Y
Sbjct: 574 CKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTY 633
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
I + N+ A L E++ + G P +Y L+ + C + A L DEM
Sbjct: 634 TCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQ 693
Query: 479 RN-IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
P++ Y LI + + + +A L +EM G+ S++C
Sbjct: 694 EGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL---SRLC 736
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 149/368 (40%), Gaps = 74/368 (20%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F++L VF N ++ N + +++G + ++++ N L+ + R++ L+ ++
Sbjct: 138 VFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVL 197
Query: 302 YRRNVLPDLVTYTTLMNGLCK----EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ P++ TYT +MN C+ +R A ++ ++ G +P++V+Y
Sbjct: 198 IKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTY--------- 248
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G Y ++G K G FGV+
Sbjct: 249 -----------------GTY---------IKGLCKVGL-------------FGVAWR--- 266
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
LI LC+ N+P +N ++ LC+ + +A + EM
Sbjct: 267 ---LIQNLCRKNQPLNN----------------HCFNAVIYGLCQGGILDEASEVFKEMK 307
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ I P + +Y LI FC GR +A + EM SG+LP+ +LI+G+C E V+
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA + + D SY+ + + F GD+ ++ + F+P+ +I
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427
Query: 598 HSLWKGME 605
+K +
Sbjct: 428 KGYYKSKQ 435
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 82/169 (48%), Gaps = 1/169 (0%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+++ F+ + P ++ L+ G + + +++EM R G PN T+ +
Sbjct: 579 AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFIN 638
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VL 307
+ K ++ + EK++E G PD + Y LI+++C G +N A L+ M +
Sbjct: 639 EYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCT 698
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
P++V YT L+N K K +A +L+ M +GLS S ++ ++C
Sbjct: 699 PNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 202/400 (50%), Gaps = 5/400 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P I N LL ++ ++ +Y++M GI P T+TFN+L C + VD
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+++ E+G P+ T+ L+ YCK G + L M VLP+ V Y T+++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN---GI-Y 377
+EG+ ++ +L +M GL PDIV++N+ I A CKEGK+ ++ + +M + G+
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P++ T ++++G+ K G L A L ++ +S Y+ + L + + A ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L+++ G PS+ YN LM+ LCK ++DA + M + P TY L+ +C
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+G+ A SL+ EM+ + LP++ C +L++ +++AE LL +K DT +
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAP-NNLTCKYM 596
N + + G+L K +E+ K G A NL Y+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 223/481 (46%), Gaps = 45/481 (9%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV- 107
+ LP N IV C + DS + + + L+P + SR+ C+ V
Sbjct: 211 FGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFN-SRISALCKEGKVL 269
Query: 108 SALTFFNWVKNDLEI---KPTSSNYCLIVHILAWNNKFSFAMKMLCE--LVELVKDCPHS 162
A F+ ++ D + +P S Y L+ +K C+ L+E K S
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLM-------------LKGFCKVGLLEDAKTLFES 316
Query: 163 VDVFQDLISCTEDCNW--AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ DL+S W V+ G E+ ++ +D G PSI S N L++GL KL
Sbjct: 317 IRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGM 376
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + M R G+ P+ T+ L H +C G VD L+++ P+ T N
Sbjct: 377 LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ S GR+++A L R M + D VT +++GLC G++ +A ++ M G
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 341 LS-----------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ PD+++Y+TL+ CK G+ E+K+L EMMG +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQ 556
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD+ I + + K+G++ SA ++ ++++ G S + Y+ LI+ L N+ F L
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
++ + + G P++ YN ++ LC+ V DA L DEM+ +NI P++ +++ LI FC
Sbjct: 617 MDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCK 676
Query: 498 I 498
+
Sbjct: 677 V 677
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 177/344 (51%), Gaps = 4/344 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + N L+ L +C+D ++++EM G PN TF IL +CK G DK
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L +E G P+ V YNT++SS+C++GR +D+ L M ++PD+VT+ + ++
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261
Query: 320 LCKEGKVREAHQLFHRM---VHRGL-SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
LCKEGKV +A ++F M + GL P+ ++YN ++ +CK G ++++K+L + N
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+ I +QG + G+ + A ++ ++ G+ S Y+ L+ LC+ A
Sbjct: 322 DLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+++ + ++G P Y L+ C V A L EM+ N P+ T L+
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+GR EA L+ +M E G D+ C ++++G C +++KA
Sbjct: 442 WNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 226/524 (43%), Gaps = 39/524 (7%)
Query: 110 LTFFNWVKNDL---EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+ F +W+ D+ I P + + L++ L ++ A ++ E+ E K C + F
Sbjct: 128 VEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPE--KGCKPNEFTF 185
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
L+ Y K GL + + G P+ V N +++ + D +
Sbjct: 186 GILVR-------GYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEK 238
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF----DPDLVTYNTLI 282
+ E+M G+ P+ TFN CK G V + +E + + P+ +TYN ++
Sbjct: 239 LVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+CK G L DA L+ + + L L +Y + GL + GK EA + +M+ +G+
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 358
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P I SYN L+ CK G + ++K+++ M NG+ PD T ++ GY G++ +A +L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E+ R + + L+ +L R A LL ++ + GY N +++ LC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 463 CDSVADAL-----------------------LLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ A+ L+ D +++ N P L TY L+ C G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA +L EM+ + PDS + I+ +C + ++ A +L KK E+YN
Sbjct: 539 RFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ + ++ L G +PN T I L +G
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 122/288 (42%), Gaps = 35/288 (12%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+ LV D + DLI+ + N K G E+ F + + QP ++ N +
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLN-GLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+ K I ++V ++M + G + T+N L + +++G ++++ E+G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGIS 626
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---------- 322
P++ TYNT I C+ G++ DA L M ++N+ P++ ++ L+ CK
Sbjct: 627 PNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEV 686
Query: 323 ------------------------EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
G++ +A +L ++ RG Y L+ + CK+
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKK 746
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+++ + +L++M+ G D ++ G GK G A N ++
Sbjct: 747 DELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 20/257 (7%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+++P S Y + +H K S A ++L ++ + K C S++ + LI N +
Sbjct: 554 KLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEK--KGCHKSLETYNSLILGLGIKNQIF 611
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
GL+ E + G P+I + N + L + ++ + +EM + I PN
Sbjct: 612 EIHGLMDE-------MREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNV 664
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKI-----EEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+F L FCK D D E ++EG Y+ + + G+L A
Sbjct: 665 FSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKAT 718
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L + R Y L+ LCK+ ++ A + H+M+ +G D + +I
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGL 778
Query: 356 CKEGKMQESKSLLYEMM 372
K G +E+ + +MM
Sbjct: 779 GKMGNKKEANNFAEKMM 795
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 215/436 (49%), Gaps = 11/436 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
ALTF + + ++ + P S+ + ++ +L +N F A + EL V +D +
Sbjct: 108 ALTFLHHMIHEGHV-PLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKV-----VLDAYSF 161
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
I C Y G F+ + G P++V L++G K + ++
Sbjct: 162 GIMIKGCCEAGYFVKG-----FRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M R+G+ PN HT+++L + F K G + E ++ G P+ YN LIS YC
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF ++ M + + ++TY L+ GLC+ K EA +L H++ GLSP+IV+Y
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI +C KM + L ++ +G+ P T ++ GY K L AL+LV E++
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ S+ Y LI A + N A + + + G VP + Y+ L+ LC ++ +
Sbjct: 397 RCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKE 456
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L + + +++P+ Y +I +C G S A+ L++EM++SGM+P+ I
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIG 516
Query: 529 GYCMEKDVNKAEALLG 544
C ++ +AE LLG
Sbjct: 517 LLCRDEKWKEAELLLG 532
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 199/411 (48%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV ++ + G P + N LL L++ N D+ W ++ E+ + +
Sbjct: 98 AYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVL 156
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++F I+ C+ G K L +EE G P++V Y TLI CK G + A L+
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLF 216
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R ++P+ TY+ LMNG K+G RE Q++ M G+ P+ +YN LI YC +
Sbjct: 217 CKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCND 276
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ + EM GI T I++ G + + A+ LV ++ + G+S + Y
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C + +A L ++ G P+L YN L+ K +++A AL L EM +
Sbjct: 337 NILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I PS TY LI F + + +A + M +SG++PD VL++G C+ ++ +
Sbjct: 397 RCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKE 456
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L + ++ YN + + + ++G + + L ++ G PN
Sbjct: 457 ASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 194/415 (46%), Gaps = 13/415 (3%)
Query: 115 WVKNDLEIKPTSSNYCLIVHILA--WNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI-S 171
W+ N+L+ K Y + I F ++L L E +V ++ LI
Sbjct: 145 WIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEF--GLSPNVVIYTTLIDG 202
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C +D N K F K +G P+ + + L+NG K + +Q+YE M
Sbjct: 203 CCKDGNVMLAK--------NLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENM 254
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
R GI PN + +N L +C +G VDK ++ E+G ++TYN LI C+ +
Sbjct: 255 KRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+A L + + + P++VTY L+NG C K+ A +LF+++ GLSP +V+YNTL
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTL 374
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I Y K + + L+ EM I P T I++ + + A + +++ G+
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGL 434
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
Y L+ LC A+ L + +G+ P+ IYN ++ CK S AL
Sbjct: 435 VPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALR 494
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
L +EMV + P+++++ + I C + EA L+ +M+ SG+ P + +++
Sbjct: 495 LLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 1/285 (0%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y T++N +A H M+H G P ++N L+ + ++ + E+
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ D ++ I+++G + G + L+ L+ FG+S + IY LI C+D
Sbjct: 152 SK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A +L ++ + G VP+ Y+ LM K + + + M I P+ Y LI
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+C G +A + EM E G+ +LI G C K +A L+ K
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +YN + N F + + + L + G +P +T +I
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLI 375
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 54/323 (16%)
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL---LYEMMGNGIYPD--TF 381
EA L +MV + ++ +NT + +G S S+ L ++ +G+ P +
Sbjct: 5 HEALILIQKMVKVPPTKALLLFNTATY----QGLQHTSHSISFILNHLLSSGMLPQAQSL 60
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQDNRPFAATSLLER 440
++I GR+ S+L L + F S +YD ++ A + A + L
Sbjct: 61 ILRLI------SGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHH 114
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ +G+VP +N L+ L + + A + +E+ + + + S + +I C G
Sbjct: 115 MIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSKVVLDAYS-FGIMIKGCCEAGY 173
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL----------------- 543
+ L+ + E G+ P+ I LI+G C + +V A+ L
Sbjct: 174 FVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSV 233
Query: 544 ---GFFAKK-----FQIYD----------TESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
GFF + FQ+Y+ +YN + + + DG + K ++ G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293
Query: 586 FAPNNLTCKYMIHSLWKGMERKF 608
A +T +I L +G +KF
Sbjct: 294 IACGVMTYNILIGGLCRG--KKF 314
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 236/487 (48%), Gaps = 17/487 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P S +H+L N+ A++ L E +++V+ P+ + + LI D +
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFL-ERMQIVEIEPNVI-TYNCLIKGYCDLHRLED 257
Query: 182 KVGLIRE-SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPN 239
+ LI E FK G P +S ++ L K I + + E+M + + P+
Sbjct: 258 AMELIAEMPFK--------GCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPD 309
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N H+ K+G D+ FL + EE F D V Y+ ++ S+C++GR++ A +
Sbjct: 310 QVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVN 369
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M+ + +PD+VTYT+++NGLC+E KV +A ++ +M G P+ VSY L+ CK G
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG 429
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
E++ ++ + P+ T +++ G+ +EG+ A +LV E+ + G + +
Sbjct: 430 NSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI +LCQ+ + A +E+ +G ++ + ++ C+ D + AL L D+M
Sbjct: 490 LLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLS 549
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N P + TY +I GR EA L +ML G++P R +I+ YC + +
Sbjct: 550 NKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCR---MGRV 606
Query: 540 EALLGFFAKKFQIYDTES-YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
E LL K + + YN V G+L + +L + LR + TC +I
Sbjct: 607 EDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 666
Query: 599 S-LWKGM 604
S L KG+
Sbjct: 667 SYLSKGI 673
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/550 (23%), Positives = 251/550 (45%), Gaps = 17/550 (3%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
E ++ + +V IC ++ + L+ +L+ LL L ++ VL + Q+D AL FF
Sbjct: 63 EDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVL-QLQTDERVALRFF 121
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT 173
W + Y ++ IL+ A ++L + + + + F ++
Sbjct: 122 YWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAK--RRIERRPEAFGYVMV-- 177
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
+Y + G +R + + G +P + CN ++ L+ N +D+ + E M
Sbjct: 178 -----SYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQI 232
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE---EGFDPDLVTYNTLISSYCKKGR 290
+ I PN T+N L +C D+ ++ +E I E +G PD ++Y T++ CK+ R
Sbjct: 233 VEIEPNVITYNCLIKGYC---DLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKR 289
Query: 291 LNDAFYLYRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ + L M + N+LPD VTY T ++ L K G EA + R D V Y+
Sbjct: 290 IKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYS 349
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ ++C+EG+M ++K ++ EM G PD T ++ G +E ++ A ++ ++ +
Sbjct: 350 AIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKH 409
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G + Y L+ LC++ A ++ +D ++P+ Y+ LM + ++A
Sbjct: 410 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 469
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L EM+ + P+ LI C + EA M++ L +G + +I+G
Sbjct: 470 CDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHG 529
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+C + D+ A +LL + D +Y + + + G + + +L + LR+G P
Sbjct: 530 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPT 589
Query: 590 NLTCKYMIHS 599
+T + +IH
Sbjct: 590 PVTYRTVIHQ 599
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 206/437 (47%), Gaps = 17/437 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL---VKDCPHSVDVFQDLISCTED 175
D + P Y VH+L+ + A++ L E E V +S V
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVH--------- 353
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
++ + G + ++ + + G P +V+ ++NGL + +DQ ++ +M + G
Sbjct: 354 ---SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PNT ++ L + CKNG+ + + EE+ + P+ +TY+ L+ + ++G+ ++A
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 470
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L R M ++ P V L+ LC+E KV EA + + ++ G + ++V++ T+I +
Sbjct: 471 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C++ ++ + SLL +M + +PD T I+ GK+GR+ A L +++ R G+ +
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTP 590
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y +I C+ R LLE++ + YN+++E LC ++ A L +
Sbjct: 591 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYKLLGK 648
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
++ K +T LI + G + ++ M ++PD ++C + +E
Sbjct: 649 VLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGK 708
Query: 536 VNKAEALLGFFAKKFQI 552
+A+ L+ F ++ +I
Sbjct: 709 SEEADKLILRFVERGRI 725
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 232/513 (45%), Gaps = 12/513 (2%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
RVL + ++AL FF WV+ + + + I+ ILA N A ++ + +E V
Sbjct: 56 RVLNSVKHRPLTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIE-V 114
Query: 157 KDCPHSVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQPSIV 206
K +DV I C + + + K ++ + F K ++ G P +
Sbjct: 115 KVDGGVLDVLVG-IGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVR 173
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L L + +++ +VY M + I P TFN + CK G+V + L+ +
Sbjct: 174 NCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVM 233
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G DP+ V+YN L++ KG + A L M + TY L+ G CK+
Sbjct: 234 RMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMF 293
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA+ L M+ RG P +V+YNT++++ C+ G++ +++ L M+ + PD + +
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY + G AL L EL+ + S Y+ LI C+ A + + + + G
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGL 413
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + + L+ C+ ++ A L DEM+ R +KP Y I +G +A
Sbjct: 414 CPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFG 473
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+ +EM G PD VLING C + + A L+ + + D +Y ++ +
Sbjct: 474 MKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHL 533
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G L K E+ L+ G P+ +T +IHS
Sbjct: 534 ISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHS 566
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 192/399 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+ VS N L+NGL D+ ++ E+M +G+ + HT+N L FCK ++
Sbjct: 237 GCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEA 296
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
N ++ G P +VTYNT++ S C+ GR++DA +M +++PDLV+Y TL+ G
Sbjct: 297 NDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYG 356
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+ G EA LF + + L P +V+YNTLI C+ G + +K + +M+ +G+ PD
Sbjct: 357 YSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD 416
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I+V+G+ + G L A L E+ G+ Y IV + P A + E
Sbjct: 417 VVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKE 476
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +G+ P L YN L+ LCK + DA L +M I P TY ++I G
Sbjct: 477 EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISG 536
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+A + +ML+ G+ P VLI+ Y + ++ A+ K + +YN
Sbjct: 537 LLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYN 596
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ ++ + L G +PN T +I+
Sbjct: 597 ALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 179/369 (48%), Gaps = 9/369 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y I++ L + S A + L +V + D+ DL+S + Y ++
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMV--------NEDLMPDLVSYNT-LIYGYSRL 360
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ F + PS+V+ N L++G + +D + ++M + G+CP+ TF
Sbjct: 361 GNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTF 420
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL FC+ G++ +++ G PD + Y T I K G + AF + M
Sbjct: 421 TILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKA 480
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PDL+TY L+NGLCK G +A++L +M G+ PD V+Y ++I A+ G +++
Sbjct: 481 EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRK 540
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ + +M+ GI+P T +++ Y GRL A E+Q GVS + Y+ LI
Sbjct: 541 AEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIY 600
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC++N A +L + G P+ Y L+ DAL L +M+DR IKP
Sbjct: 601 GLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKP 660
Query: 484 SLSTYRALI 492
T+ AL+
Sbjct: 661 DSCTHSALM 669
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A++ GL+R++ + F L G PS+V+ L++ +D + ++EM G+ P
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + CK +D ++E +G P+ TY LI+ DA LY
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R + PD T++ LM L K+ K+ +L L IV N+ + E
Sbjct: 651 KDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL------ENLPLAIVEINS---TWIAE 701
Query: 359 G--KMQESKS 366
G K++ESK+
Sbjct: 702 GFVKLEESKN 711
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/543 (23%), Positives = 247/543 (45%), Gaps = 11/543 (2%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
+V +C +++ + L+ DL+ LL L ++ VL + QSD AL FF W
Sbjct: 72 LVREVCRLIERRSAWNAKLEGDLRRLLRSLKPRQVCAVL-QLQSDERIALDFFYWAGRQW 130
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ Y +++ +L+ A ++L + + + + F ++ +Y
Sbjct: 131 RYRHDPIVYYMMLQVLSKTKLCQGARRVL--RLMVRRGIARRPEAFAHVMV-------SY 181
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G +R + + G +P+++ CN ++ L+ N +++ + E M +GI PN
Sbjct: 182 SRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNV 241
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L +C V+ + ++ +G PD V+Y T++ C+ R+ + L
Sbjct: 242 VTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEK 301
Query: 301 MYRRNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + N L PD VTY TL++ L K G EA + RG D V Y+ ++ ++C +G
Sbjct: 302 MVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQG 361
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M +K ++ EM+ G PD T +V G K G++ A ++ ++ + G + Y
Sbjct: 362 RMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYT 421
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LCQ A ++ +D + P+ Y+ +M L + +++A + EM+ +
Sbjct: 422 ALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTK 481
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P+ LI C + EA M+E L G ++ +I+G+C +++ A
Sbjct: 482 GFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTA 541
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+LL + D ++ A+ + + G + + + L+ G P +T + +IH
Sbjct: 542 LSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQ 601
Query: 600 LWK 602
K
Sbjct: 602 YCK 604
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 221/475 (46%), Gaps = 15/475 (3%)
Query: 133 VHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE-SFK 191
+H+L NK A++ L E ++LV P+ V + LI D + LI E FK
Sbjct: 213 IHVLVMANKLEKALRFL-ERMQLVGITPNVV-TYNCLIKGYCDLYQVEHAMELIAEMPFK 270
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVF 250
G P VS ++ L + I + + E+M + + P+ T+N L H+
Sbjct: 271 --------GCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHML 322
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
K+G D+ FL + EE GF D V Y+ +++S+C +GR++ A + M + PD+
Sbjct: 323 SKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDV 382
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
VTYT ++NGLCK GKV EA ++ +M G P+ VSY L+ C+ G E++ ++
Sbjct: 383 VTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNT 442
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
+ P+ T +++ G +EG+L A ++V E+ G + + LI +LC + +
Sbjct: 443 SEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQK 502
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A +E G + + ++ C+ D++ AL L D+M N P T+ A
Sbjct: 503 MNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTA 562
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
+I GR EA +ML+ G+ P R +I+ YC V + LLG +
Sbjct: 563 IIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRS 622
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS-LWKGM 604
+ +YN V G+ ++ LR + TC ++ S L KG+
Sbjct: 623 KC--RTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGI 675
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 209/474 (44%), Gaps = 41/474 (8%)
Query: 102 CQSDSVSALTFFNWVKNDLEIK----------------PTSSNYCLIVHILAWNNKFSFA 145
C D VS T ++ D IK P Y +VH+L+ + A
Sbjct: 272 CPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEA 331
Query: 146 MKMLCELVELVKDCPHSVDVFQ-DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
++ L E E FQ D + + N ++ G + + + + + G P
Sbjct: 332 LEFLRETEE---------RGFQVDKVGYSAIVN-SFCMQGRMDRAKEIVNEMITKGCSPD 381
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V+ ++NGL K+ +++ ++ ++M + G PNT ++ L + C++G+ + +
Sbjct: 382 VVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMN 441
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
EE+ + P+ +TY+ ++ ++G+L++A + R M + P V L+ LC E
Sbjct: 442 TSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQ 501
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ EA + ++RG + + V++ T+I +C+ + + SLL +M N +PD T
Sbjct: 502 KMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFT 561
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I+ GK+GR+ A +++ + G+ + Y +I C+ R LL ++
Sbjct: 562 AIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSR 621
Query: 445 GYVPSLEIYNELMESLCK------CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ YN+++E LC D V +L +D N T L+ +
Sbjct: 622 SKCRT--AYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDAN------TCHMLMESYLSK 673
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G A + M + ++PD ++C L +E + +A+ L+ F ++ I
Sbjct: 674 GIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNI 727
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 38/273 (13%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ R+ L GF P+ V N L+ L +++ + EE G N F
Sbjct: 466 GKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNF 525
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ H FC++ ++D L+ + PD VT+ +I + KKGR+ +A M +
Sbjct: 526 TTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLK 585
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P VTY +++ CK G+V E +L +M+ R S +YN +I C G +
Sbjct: 586 KGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSR--SKCRTAYNQVIEKLCNFGNPEA 643
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGK------------------------------- 392
+ ++ ++ D TC ++++ Y
Sbjct: 644 ADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSK 703
Query: 393 ----EGRLLSALNLVVELQRFGVSISRDIYDYL 421
EG+L A NL+++ + G +IS D +L
Sbjct: 704 KLVLEGKLEEADNLMLQFVQRG-NISPDSSQHL 735
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
N+ ++H ++ A+ +L ++ L P +V F +I A K G I
Sbjct: 524 NFTTVIHGFCQSDNIDTALSLLDDMY-LNNKHPDAV-TFTAIID-------ALGKKGRIE 574
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K L G P+ V+ +++ K+ +++ ++ +M C +N +
Sbjct: 575 EATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTA--YNQVI 632
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C G+ + + + + D T + L+ SY KG A+ + M+ RN++
Sbjct: 633 EKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLI 692
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG-LSPD 344
PDL L L EGK+ EA L + V RG +SPD
Sbjct: 693 PDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISPD 730
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTQQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLX 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM++ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 153/272 (56%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M+ +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQVSGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L + G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 219/466 (46%), Gaps = 29/466 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ + C S +F LI AY + G ++K +K D G QP V N L+ G
Sbjct: 361 ITEGCYPSRRIFNSLIH-------AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 215 ------LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L L+ ++ + Y EM + N + L C G +K + ++
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +I C ++++AF L+ M +V+PD+ TYT L++ CK G +++
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ 533
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F MV G +P++V+Y LI AY K KM + L M+ G P+ T ++
Sbjct: 534 ARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID 593
Query: 389 GYGKEGRLLSALNLVVELQ------------RFGVSISRD----IYDYLIVALCQDNRPF 432
G+ K G++ A + ++ + RD Y L+ LC+ ++
Sbjct: 594 GHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A LL+ + +G P+ +Y+ L++ CK + +A ++ +M +R P++ TY +LI
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
R A+ ++ MLE+ P+ I +I+G C ++A L+ +K
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ +Y A+ + F + G + K +EL ++ G APN +T + +I+
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 192/401 (47%), Gaps = 20/401 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +++ R+ + GF P + + ++ L + +D + ++EEM + P+ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL FCK G + + + +++ +G P++VTY LI +Y K +++ A L+ +M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PD 344
+P++VTYT L++G CK G++ +A Q++ RM RG + P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPN 635
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
I +Y L+ CK K++E++ LL M G P+ ++ G+ K G+L A +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ G + Y LI L +D R A +L R+ ++ P++ IY E+++ LCK
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+A L M ++ P++ TY A+I F G+ + + LM +M G P+ R
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
VLIN C ++ A LL + + Y V F
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 189/422 (44%), Gaps = 22/422 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ LL G L+ + +C ++ M G P+ FN L H +C++GD
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLND------AFYLYRIMYRRNVLPDLVTYTTL 316
L+K+ + G P V YN LI C +L A Y M +V+ + V + L
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
LC GK +A+ + M+ +G PD +Y+ +I C K+ + L EM N +
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD FT I++ + K G L A E+ R G + + Y LI A + + +A
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV---------------DRNI 481
L E + +G +P++ Y L++ CK + A + M D NI
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 482 K-PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P++ TY AL+ C + EA L+D M G P+ + LI+G+C +++A+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +++ + +Y+++ + +D L +++ R L APN + MI L
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751
Query: 601 WK 602
K
Sbjct: 752 CK 753
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 192/451 (42%), Gaps = 51/451 (11%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + L++ K+ + Q + ++EM R G PN T+ L H + K + N
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD------------- 309
E + EG P++VTY LI +CK G++ A +Y M +PD
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 310 ---LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+ TY L++GLCK KV+EA L M G P+ + Y+ LI +CK GK+ E++
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ +M G P+ +T ++ K+ RL AL ++ + + + IY +I LC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A L+ + + G P++ Y +++ K V L L +M + P+
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812
Query: 487 TYRALI--CCFCGI----------------------------GRSGE---AVSLMDEMLE 513
TYR LI CC G+ G + E ++ L+DE+ E
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK--KFQIYDTESYNAVFNMFAEDGDL 571
+ +P R+LI+ +C + A L + + D + Y+++ + +
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKV 932
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K EL ++ G P Y++ L +
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIR 963
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 9/404 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL + + + D+G++PS ++ N L+ L+ + +D + V+ EM G + +T
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
H+ CK G + L IE+E F D V Y +IS C+ +A M
Sbjct: 271 GCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ +P++VTY L+ G ++ ++ ++ M+ G P +N+LI AYC+ G
Sbjct: 328 SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG------VSISRDI 417
+ LL +M G P I++ G +L S L + + +G V +++
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L LC + A S++ + G++P Y++++ LC V +A LL +EM
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ P + TY LI FC +G +A DEM+ G P+ LI+ Y + ++
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
A L + I + +Y A+ + + G + K ++ R
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 232/510 (45%), Gaps = 54/510 (10%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI-----SRVLLRCQS 104
F+P+T +K++ L+C++ K ++ L + ++P + + I +V L Q
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ- 533
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
A +F+ + D P Y ++H K S A ++ E++ L + C +V
Sbjct: 534 ----ARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSANELF-EMM-LSEGCIPNVV 586
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKT--------LDVGFQ--------PSIVSC 208
+ LI + K G I ++ + + + +D+ F+ P+I +
Sbjct: 587 TYTALID-------GHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L++GL K + + + + + M G PN ++ L FCK G +D+ K+ E
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P++ TY++LI K RL+ A + M + P+++ YT +++GLCK GK E
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A++L M +G P++V+Y +I + K GK+ + L+ +M G P+ T ++++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT-SLLERIGQDGYV 447
G L A L+ E+++ Y +I NR F + LL+ I ++ V
Sbjct: 820 HCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---NREFIISLGLLDEIAENVAV 876
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEM--------VDRNIKPSLSTYRALICCFCGIG 499
P + Y L++S CK + AL L EM D+++ Y +LI
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL------YSSLIESLSLAS 930
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ +A L +M++ G +P+ I L+ G
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKG 960
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 171/403 (42%), Gaps = 48/403 (11%)
Query: 211 LLNGLLKLNCIDQCWQV-YEEMGRI---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
LLN L++ C + W V EE+GR+ G P+ T+N L VF + +D ++
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ GF+ D T + CK GR +A L + + D V YT +++GLC+
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLF 315
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA RM P++V+Y L+ ++ ++ K +L M+ G YP
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP-------- 367
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
SR I++ LI A C+ A LL+++G G
Sbjct: 368 ---------------------------SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 447 VPSLEIYNELMESLCKCDSVA--DALLLKD----EMVDRNIKPSLSTYRALICCFCGIGR 500
P +YN L+ +C + + D L L + EM+D ++ + L C CG G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A S++ EM+ G +PD+ +I C V+ A L + D +Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + F + G L + + +R G APN +T +IH+ K
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 46/258 (17%)
Query: 389 GYGKEGRLLSAL--------------NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
GYG G + AL + E++ I + + LI C++ A
Sbjct: 157 GYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVA 216
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L R+ GY PS YN L+ + D + A L+ EM D T +
Sbjct: 217 LEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL 276
Query: 495 FCGIGRSGEAVSLMDE--------------------------------MLESGMLPDSQI 522
C GR EA++L+++ M S +P+
Sbjct: 277 LCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
R+L+ G ++ + + + +L + +N++ + + GD S +L K+
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396
Query: 583 RLGFAPNNLTCKYMIHSL 600
G P + +I +
Sbjct: 397 DCGCQPGYVVYNILIGGI 414
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 199/419 (47%), Gaps = 9/419 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ ++ ++ ++A NKF + + ++ L H + F LI C + +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL--GISHDLYSFTILIHC-------FCRC 127
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ + K + +GF+PSIV+ LLNG + N + + + M G PN +
Sbjct: 128 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CKN D++ +E++G D VTYNTLIS GR DA L R M +
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P+++ +T L++ KEG + EA L+ M+ R + P++ +YN+LI +C G + +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G +PD T ++ G+ K R+ + L E+ G+ Y+ LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A + R+ G P + YN L++ LC + AL++ +++ +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +I C + EA L + G+ PD+ +I+G C + +A+ L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 195/421 (46%), Gaps = 1/421 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F F + L PSIV +L + K+N D +Y +M +GI + ++F IL
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+ + L K+ + GF P +VT +L++ +C+ R +A L M +
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y T++NGLCK + A ++F+ M +G+ D V+YNTLI G+ ++ L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M+ I P+ ++ + KEG LL A NL E+ R V + Y+ LI C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + G P + YN L+ CK V D + L EM + + T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI +C G+ A + + M++ G+ PD +L++ C + KA ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WKGMER 606
K D +YN + L + L + R G P+ + MI L KG++R
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 607 K 607
+
Sbjct: 482 E 482
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 147/275 (53%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + R + P+++ L++ +K + + +Y+EM R + PN T+
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FC +G + + + +G PD+VTYNTLI+ +CK R+ D L+ M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++ D TY TL++G C+ GK+ A ++F+RMV G+SPDIV+YN L+ C GK+++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ ++ + + D T II+QG + +L A L L R GV Y +I
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
LC+ A L R+ +DG++PS IY+E +
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 142/289 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + V+ N L++GL ++ +M + I PN F L F K G++ +
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ P++ TYN+LI+ +C G L DA Y++ +M + PD+VTY TL+ G
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK +V + +LF M ++GL D +YNTLI YC+ GK+ ++ + M+ G+ PD
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I++ G++ AL +V +LQ+ + + Y+ +I LC+ ++ A L
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ + G P Y ++ LC+ +A L M + PS Y
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 6/369 (1%)
Query: 217 KLNCI--DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+L+CI D + ++ EM + P+ F + V K D V K+E G D
Sbjct: 54 ELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 113
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
L ++ LI +C+ RL+ A L M + P +VT +L+NG C+ + +EA L
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M G P++V YNT+I CK + + + Y M GI D T ++ G G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
R A L+ ++ + + + + LI ++ A +L + + + VP++ YN
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ C + DA + D MV + P + TY LI FC R + + L EM
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G++ D+ LI+GYC +N A+ + D +YN + + +G + K
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 575 M----ELQK 579
+ +LQK
Sbjct: 414 LVMVEDLQK 422
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 70/345 (20%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +DAF L+ M + +P +V +T ++ + K K L+H+M + G+S D+ S+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI +C+ ++ + +LL +MM G P T ++ G+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF------------------- 159
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK------- 462
CQ NR A SL++ + G+VP++ IYN ++ LCK
Sbjct: 160 ----------------CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 463 -------------CDSV---------------ADALLLKDEMVDRNIKPSLSTYRALICC 494
D+V DA L +MV R I P++ + ALI
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F G EA +L EM+ ++P+ LING+C+ + A+ + K D
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+YN + F + + M+L G + T +IH
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWAYVKVGLI 186
Y ++H K + A K+ +V DC S D+ + L+ C CN ++ L+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMV----DCGVSPDIVTYNILLDCL--CNNGKIEKALV 415
Query: 187 R-ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
E + + +DV I++ N ++ GL + + + + W ++ + R G+ P+ +
Sbjct: 416 MVEDLQ--KSEMDV----DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ C+ G + + +++E+GF P Y+ + +
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 198/401 (49%), Gaps = 9/401 (2%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y +VH L K A + E+ + + P +V + +I A K + +
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQ--QGVPPNVVTYNSVI-------HALCKARAVDK 264
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ R+ + G QP V+ N L++G L Q ++++EM G+ PNT T +
Sbjct: 265 AQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVA 324
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK+G +++ F + + +G ++++Y+TL+ Y G L D L+ +M R ++P
Sbjct: 325 FLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVP 384
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ + L+NG K G VREA +F M RGL+PD+++Y +I A+C+ G M ++
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M+ G+ P+ Q ++QG+ G L+ A LV E++ G+ + LI LC++
Sbjct: 445 NHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKE 504
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R F A + + I + G + I+ L++ C +++A + D MV I+P + TY
Sbjct: 505 GRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L+ C GR + + L E+L G+ P + ++++G
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 199/410 (48%), Gaps = 24/410 (5%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
++V + +++GL K + + ++ EM + G+ PN T+N + H CK VDK G L
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ G PD VTYNTLI Y G+ A +++ M R V+P+ VT +T + LCK
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G++ EA + F M+ +G +I+SY+TL+ Y G + + +L M+ +GI P+
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV--ALCQDNRPFAATSLLERI 441
I+V GY K G + A+ + ++Q+ G ++ D+ YL V A C+ A +
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRG--LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G P+ +Y L++ C + A L E+ ++ + P + ++ +LI C GR
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE----- 556
EA + D ++ +G D I LI+GYC L+G ++ F+++D
Sbjct: 508 FEAQRIFDMIIRTGEKADVNIFTSLIDGYC----------LIGKMSEAFRVHDAMVSVGI 557
Query: 557 -----SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+Y + N ++G + + L + L G P T ++ L+
Sbjct: 558 EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLF 607
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 192/391 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++RE+ F G P +++ +++ ++ +D + M G+ P
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + L FC +GD+ K + +I +G P ++++ +LI+ CK+GR+ +A ++
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++ R D+ +T+L++G C GK+ EA ++ MV G+ PDIV+Y TL+ CK
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ + L E++ G+ P TFT II+ G GR +A + E+ G++++ Y
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC++N A ++ +++ + I N ++ + K +A L + D
Sbjct: 635 SILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD 694
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P++ TY ++ G EA + ML+SG+ P S V++ + ++ K
Sbjct: 695 YGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVK 754
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
A + K +++ + + + ++F+ G
Sbjct: 755 AGIYMCRVDGKSILFEASTASMLLSLFSCKG 785
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 212/487 (43%), Gaps = 44/487 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P + Y ++H + ++ A++M E+ S V + ++C+ +
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMT--------SRGVIPNTVTCSTFVAF-LC 327
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I E+ + F L G + +I+S + LL+G C+ ++ M R GI PN H
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNIL + + K G V + E +++ G +PD++TY +I ++C+ G ++DA + M
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM 447
Query: 302 YRRNVLPDLVTY-----------------------------------TTLMNGLCKEGKV 326
+ V P+ Y +L+N LCKEG+V
Sbjct: 448 IDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRV 507
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA ++F ++ G D+ + +LI YC GKM E+ + M+ GI PD T +
Sbjct: 508 FEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTL 567
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V G K GR+ L L EL GV + Y ++ L R AA + + + + G
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
++ Y+ L+ LC+ + +A+ + ++ N+K + +I R EA
Sbjct: 628 AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEG 687
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L + + G++P Q +++ E V +AE + K + N +
Sbjct: 688 LFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLL 747
Query: 567 EDGDLSK 573
E G++ K
Sbjct: 748 EKGEIVK 754
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 201/417 (48%), Gaps = 41/417 (9%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK-VNG 261
P++ + + L++ + +D + + + R G+ + + L C D+ V+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR-NVLP-DLVTYTTLMNG 319
++ E G PD ++Y+T++ S C GR A + R+ ++ P ++V Y+T+++G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L KEGKV EA LFH M +G+ P++V+YN++I A CK + +++ +L +M+GNG+ PD
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA----- 434
T ++ GY G+ A+ + E+ GV + + LC+ R A
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 435 ------------------------------TSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++L + +DG VP+ ++N L+ KC
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V +A+ + ++M R + P + TY A+I FC +G +A+ + M++ G+ P+ + +
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI G+C D+ KAE L+ K S+ ++ N ++G ++ E Q+ F
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG---RVFEAQRIF 514
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 199/416 (47%), Gaps = 10/416 (2%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI-----CP-NTHTFNIL 246
F + ++G P +S + +LK C D Q ++ R+ + CP N ++ +
Sbjct: 162 FHRMPELGCVPDAIS----YSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTV 217
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
H K G V + ++ ++G P++VTYN++I + CK ++ A + R M V
Sbjct: 218 VHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV 277
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD VTY TL++G G+ ++A ++F M RG+ P+ V+ +T + CK G+++E++
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
M+ G + + ++ GY G L+ NL + R G+ ++ +++ L+
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A + E + + G P + Y ++ + C+ S+ DA+ + M+D+ ++P+ +
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
Y+ LI FC G +A L+ E+ G+ P LIN C E V +A+ +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + D + ++ + + G +S+ + + +G P+ +T +++ K
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 3/333 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA-HQ 331
P + TY+ LI C+ RL+ AF + + R+ + D++ ++L+ GLC + EA
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM--GNGIYPDTFTCQIIVQG 389
LFHRM G PD +SY+T++ + C +G+ Q + +L + G G + +V G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
KEG++ A +L E+ + GV + Y+ +I ALC+ A +L ++ +G P
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
YN L+ A+ + EM R + P+ T + C GR EA D
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
ML G + L++GY + L + + + +N + N +A+ G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + M + + + G P+ LT +IH+ +
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCR 433
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 140/308 (45%), Gaps = 4/308 (1%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R LP + TY+ L++ C+ ++ A F ++ +G+ D++ ++L+ C + E
Sbjct: 97 RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDE 156
Query: 364 SKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLV--VELQRFGVSISRDIYDY 420
+ +L+ M G PD + +++ +GR AL+++ Q G + +Y
Sbjct: 157 AVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYST 216
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ L ++ + A L + Q G P++ YN ++ +LCK +V A + +MV
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P TY LI + +G+ +AV + EM G++P++ C + C + +A
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K + SY+ + + +A G L + L +R G PN +++
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396
Query: 601 WK-GMERK 607
K GM R+
Sbjct: 397 AKCGMVRE 404
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P I+S L+N L K + + ++++ + R G + + F L +C G + +
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEA 545
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ + G +PD+VTY TL++ CK GR++D L+R + + V P TY +++G
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
L G+ A ++F M+ G++ I +Y+ L+ C+ +E+ ++ ++ + D
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ K R A L + +G+ + Y ++ L ++ A +
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFS 725
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P+ N ++ +L + + A + + ++I ST L+ F G
Sbjct: 726 VMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKG 785
Query: 500 RSGEAVSLM 508
+ E ++L+
Sbjct: 786 KHREHLNLL 794
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 2/256 (0%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
V D SV + D+++ N K G I + FR+ L G +P+ + +L+GL
Sbjct: 548 VHDAMVSVGIEPDIVTYGTLVNGC-CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGL 606
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++++EM GI T++IL C+N ++ +K+ D+
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDI 666
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V N +IS K R +A L+ + ++P + TYT +M L KEG V EA +F
Sbjct: 667 VILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSV 726
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ GLSP N ++ ++G++ ++ + + G I + T +++ + +G+
Sbjct: 727 MLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGK 786
Query: 396 LLSALNLV-VELQRFG 410
LNL+ + Q FG
Sbjct: 787 HREHLNLLPAKYQFFG 802
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 215/439 (48%), Gaps = 15/439 (3%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P + +V + +++ A+ + G + E+ + G + + N++L L+
Sbjct: 100 PMAHEVMRGMVA-------AFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETG 152
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+V++ M R G+CP+ +F L V C+ G V++V+ L + GF D T
Sbjct: 153 SFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCT 212
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
++ S C+KGR D +R M P++V YT ++GLCK V++A + MV R
Sbjct: 213 VVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 272
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLS 398
GL P++ ++ TLI CK G + + L +++ + Y P+ T +++ GY +EG+L
Sbjct: 273 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 332
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L+V + G+ + + Y LI C+ A L+ ++ Q+G++P++ YN +++
Sbjct: 333 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 392
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK + +A + + +K TY LI C G A+ L D M+E+G P
Sbjct: 393 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 452
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI---YDTESYNAVFNMFAEDGDLSKLM 575
D + LI+ YC ++ + +++ FF K I ++Y ++ + + G + +
Sbjct: 453 DIEAYTSLISTYCQQRQMEESQK---FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMAL 509
Query: 576 ELQKRFLRLG-FAPNNLTC 593
+ +R ++ G FA + L C
Sbjct: 510 RVFERMVQNGCFADSILMC 528
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 5/171 (2%)
Query: 433 AATSLLERIGQDGYVP-SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
AAT+ + R G +P + E+ ++ + + + +A + EM + + T +
Sbjct: 89 AATAFVAR----GSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWV 144
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
+ G A + D M +G+ PD + R L+ C E V + +ALL +
Sbjct: 145 LRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGF 204
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D + V E G + E +R L +G PN + I L K
Sbjct: 205 SLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCK 255
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 219/466 (46%), Gaps = 29/466 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ + C S +F LI AY + G ++K +K D G QP V N L+ G
Sbjct: 361 ITEGCYPSRRIFNSLIH-------AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 215 ------LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L L+ ++ + Y EM + N + L C G +K + ++
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +I C ++++AF L+ M +V+PD+ TYT L++ CK G +++
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ 533
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F MV G +P++V+Y LI AY K KM + L M+ G P+ T ++
Sbjct: 534 ARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID 593
Query: 389 GYGKEGRLLSALNLVVELQ------------RFGVSISRD----IYDYLIVALCQDNRPF 432
G+ K G++ A + ++ + RD Y L+ LC+ ++
Sbjct: 594 GHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A LL+ + +G P+ +Y+ L++ CK + +A ++ +M +R P++ TY +LI
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLI 713
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
R A+ ++ MLE+ P+ I +I+G C ++A L+ +K
Sbjct: 714 DRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ +Y A+ + F + G + K +EL ++ G APN +T + +I+
Sbjct: 774 PNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 192/401 (47%), Gaps = 20/401 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +++ R+ + GF P + + ++ L + +D + ++EEM + P+ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL FCK G + + + +++ +G P++VTY LI +Y K +++ A L+ +M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PD 344
+P++VTYT L++G CK G++ +A Q++ RM RG + P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPN 635
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
I +Y L+ CK K++E++ LL M G P+ ++ G+ K G+L A +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ G + Y LI L +D R A +L R+ ++ P++ IY E+++ LCK
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+A L M ++ P++ TY A+I F G+ + + LM +M G P+ R
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
VLIN C ++ A LL + + Y V F
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 189/422 (44%), Gaps = 22/422 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ LL G L+ + +C ++ M G P+ FN L H +C++GD
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLND------AFYLYRIMYRRNVLPDLVTYTTL 316
L+K+ + G P V YN LI C +L A Y M +V+ + V + L
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
LC GK +A+ + M+ +G PD +Y+ +I C K+ + L EM N +
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD FT I++ + K G L A E+ R G + + Y LI A + + +A
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV---------------DRNI 481
L E + +G +P++ Y L++ CK + A + M D NI
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 482 K-PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P++ TY AL+ C + EA L+D M G P+ + LI+G+C +++A+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +++ + +Y+++ + +D L +++ R L APN + MI L
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751
Query: 601 WK 602
K
Sbjct: 752 CK 753
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 192/451 (42%), Gaps = 51/451 (11%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + L++ K+ + Q + ++EM R G PN T+ L H + K + N
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD------------- 309
E + EG P++VTY LI +CK G++ A +Y M +PD
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 310 ---LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+ TY L++GLCK KV+EA L M G P+ + Y+ LI +CK GK+ E++
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ +M G P+ +T ++ K+ RL AL ++ + + + IY +I LC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A L+ + + G P++ Y +++ K V L L +M + P+
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812
Query: 487 TYRALI--CCFCGI----------------------------GRSGE---AVSLMDEMLE 513
TYR LI CC G+ G + E ++ L+DE+ E
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK--KFQIYDTESYNAVFNMFAEDGDL 571
+ +P R+LI+ +C + A L + + D + Y+++ + +
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKV 932
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K EL ++ G P Y++ L +
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIR 963
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 9/404 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL + + + D+G++PS ++ N L+ L+ + +D + V+ EM G + +T
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
H+ CK G + L IE+E F D V Y +IS C+ +A M
Sbjct: 271 GCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ +P++VTY L+ G ++ ++ ++ M+ G P +N+LI AYC+ G
Sbjct: 328 SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG------VSISRDI 417
+ LL +M G P I++ G +L S L + + +G V +++
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L LC + A S++ + G++P Y++++ LC V +A LL +EM
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ P + TY LI FC +G +A DEM+ G P+ LI+ Y + ++
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
A L + I + +Y A+ + + G + K ++ R
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 232/510 (45%), Gaps = 54/510 (10%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI-----SRVLLRCQS 104
F+P+T +K++ L+C++ K ++ L + ++P + + I +V L Q
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ- 533
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
A +F+ + D P Y ++H K S A ++ E++ L + C +V
Sbjct: 534 ----ARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSANELF-EMM-LSEGCIPNVV 586
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKT--------LDVGFQ--------PSIVSC 208
+ LI + K G I ++ + + + +D+ F+ P+I +
Sbjct: 587 TYTALID-------GHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L++GL K + + + + + M G PN ++ L FCK G +D+ K+ E
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P++ TY++LI K RL+ A + M + P+++ YT +++GLCK GK E
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A++L M +G P++V+Y +I + K GK+ + L+ +M G P+ T ++++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT-SLLERIGQDGYV 447
G L A L+ E+++ Y +I NR F + LL+ I ++ V
Sbjct: 820 HCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---NREFIISLGLLDEIAENVAV 876
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEM--------VDRNIKPSLSTYRALICCFCGIG 499
P + Y L++S CK + AL L EM D+++ Y +LI
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL------YSSLIESLSLAS 930
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ +A L +M++ G +P+ I L+ G
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKG 960
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 171/403 (42%), Gaps = 48/403 (11%)
Query: 211 LLNGLLKLNCIDQCWQV-YEEMGRI---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
LLN L++ C + W V EE+GR+ G P+ T+N L VF + +D ++
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ GF+ D T + CK GR +A L + + D V YT +++GLC+
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLF 315
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA RM P++V+Y L+ ++ ++ K +L M+ G YP
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP-------- 367
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
SR I++ LI A C+ A LL+++G G
Sbjct: 368 ---------------------------SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 447 VPSLEIYNELMESLCKCDSVA--DALLLKD----EMVDRNIKPSLSTYRALICCFCGIGR 500
P +YN L+ +C + + D L L + EM+D ++ + L C CG G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A S++ EM+ G +PD+ +I C V+ A L + D +Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + F + G L + + +R G APN +T +IH+ K
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 51/261 (19%)
Query: 389 GYGKEGRLLSAL--------------NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
GYG G + AL + E++ I + + LI C++ A
Sbjct: 157 GYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVA 216
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L R+ GY PS YN L+ + D + A L+ EM D T +
Sbjct: 217 LEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL 276
Query: 495 FCGIGRSGEAVSLMDE--------------------------------MLESGMLPDSQI 522
C GR EA++L+++ M S +P+
Sbjct: 277 LCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
R+L+ G ++ + + + +L + +N++ + + GD S +L K+
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396
Query: 583 RLGFAPNNLTCKYMIHSLWKG 603
G P Y+++++ G
Sbjct: 397 DCGCQPG-----YVVYNILIG 412
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/625 (26%), Positives = 280/625 (44%), Gaps = 57/625 (9%)
Query: 14 NFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGD 73
NF ++F FS + ++ + II L + FL + + K V+L S L
Sbjct: 107 NFFKAVSFHGFSHSIYAFKI-IIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFS-- 163
Query: 74 SHLTLLQNDLKPLLPHLGAHEI-SRVLLRCQSDSV----SALTFFNWVKNDLEIKPTSSN 128
TLL + P H+G I + VL++ +++ +A F + LE+ S N
Sbjct: 164 ---TLLDS---PQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCN 217
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
+ L + A N+ F + EL KD S +VF I C ++ K I +
Sbjct: 218 FLL--NCFAEANQTEFIRSLFEEL----KDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVK 271
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP-NTHTFNILT 247
+ + + G P++V+ ++GL + C++ ++ ++ RI P N++ +N +
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDL-RIRNQPLNSYCYNAVI 330
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+NG++ + LE + G P +Y+ LI CKKG++ A L M + NV
Sbjct: 331 HEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVK 390
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P LVTY++L +GLCK G + +FH + G D++SYNTLI + + M + L
Sbjct: 391 PSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKL 450
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
++EM NG P++FT ++ G+ K RL AL + + + GV ++ + + +
Sbjct: 451 VHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNR 510
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK------------------------- 462
+ + A L+ + G VP+ YN +++ LCK
Sbjct: 511 EGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIH 570
Query: 463 ----CDSVA------DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
D A ALLL +M+ I PS+ TY LI F + EA L EM+
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ G++PD I +I G+C D+ A AL ++ + + +Y + + + + +
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMI 597
K L + R P+ LT +I
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALI 715
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 223/486 (45%), Gaps = 18/486 (3%)
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSV-DVFQDLISCTEDCNWA---------- 179
+I+H+LA L +++ K+ V ++F L+ +D +
Sbjct: 126 IIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLLDSPQDAHMGGSIIVANVLI 185
Query: 180 --YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ + ++ ++ F + G + +I+SCNFLLN + N + ++EE+ G
Sbjct: 186 KVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPS 245
Query: 238 PNTHTFNILTHVFCK-----NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
PN T+ I+ + +CK N D+ K LE++E G P +VTY I C+ G +
Sbjct: 246 PNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVE 305
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A L R + RN + Y +++ C+ G++ EA +L M G+SP SY+ LI
Sbjct: 306 FALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILI 365
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
CK+G+++++ L+ EM+ + + P T + G K G +L++ L G
Sbjct: 366 DGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYK 425
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
Y+ LI +A L+ + +G VP+ +N L+ CK + AL +
Sbjct: 426 HDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEV 485
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
M+ ++ ++ T + F G EA+ L++E+ + G++P+S ++I C
Sbjct: 486 FTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCK 545
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E+ KA +L K YN + + +A+ + +K + L + L++G P+ +T
Sbjct: 546 EQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVT 605
Query: 593 CKYMIH 598
+I+
Sbjct: 606 YTMLIN 611
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 211/466 (45%), Gaps = 9/466 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y +H L FA++++ +L +++ P + + +I + +
Sbjct: 286 PTVVTYGAYIHGLCRAGCVEFALRLIRDL--RIRNQPLNSYCYNAVIH-------EFCRN 336
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+F+ G P+ S + L++GL K +++ + EEM + + P+ T+
Sbjct: 337 GELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTY 396
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L CK+G + + EG+ D+++YNTLI+ + + + A L M
Sbjct: 397 SSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRM 456
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+P+ T+ L++G CK ++ +A ++F M+ G+ +I + N + + +EG E
Sbjct: 457 NGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWE 516
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L+ E+ GI P+++T I+++ KE + A ++ + + V Y+ LI
Sbjct: 517 ALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLID 576
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ + P A L ++ + G PS+ Y L+ + +A L EM+ + + P
Sbjct: 577 GYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVP 636
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ +I FC +G A +L +EM + G P+ LI+GY K ++KA+ L
Sbjct: 637 DEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLF 696
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D +Y A+ + G ++ E+ G PN
Sbjct: 697 NKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPN 742
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQ 167
AL N V+ DL I P S Y +++ L K A ++L +++ V C +
Sbjct: 517 ALKLINEVQ-DLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLI 575
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D Y K ++ + K L VG PSIV+ L+N + + + + +
Sbjct: 576 D----------GYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYL 625
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM + G+ P+ F + FCK GD+ E++ + G P++VTY LI Y K
Sbjct: 626 FKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFK 685
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R++ A +L+ M R NV PD +TYT L+ G G ++F+ M G+ P+ +
Sbjct: 686 IKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTA 745
Query: 348 YNTL 351
Y TL
Sbjct: 746 YATL 749
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 221/471 (46%), Gaps = 13/471 (2%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTED-CNWAYVKVGLIRESFKTFRKT 196
+K SF++ +L +L V F L+ C ED + A G + E+ F +
Sbjct: 155 HKLSFSLSTFGKLTKL--GFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQM 212
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+++G P +++ N L+NGL + + + +M G+ + T+ + + CK GD
Sbjct: 213 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 272
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
L K+EE PD+V Y+ +I CK G +DA YL+ M + + P++ TY +
Sbjct: 273 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 332
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++G C G+ +A +L M+ R ++PD++++N LI A KEGK+ E++ L EM+ I
Sbjct: 333 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 392
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRPFAA 434
+PDT T ++ G+ K R A ++ F + S D+ ++ +I C+ R
Sbjct: 393 FPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTFNTIIDVYCRAKRVDEG 446
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
LL I + G V + YN L+ C+ D++ A L EM+ + P T L+
Sbjct: 447 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 506
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
FC + EA+ L + + S + D+ ++I+G C V++A L D
Sbjct: 507 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 566
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++YN + + F +S L + G P+N T +I K E
Sbjct: 567 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 617
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 197/407 (48%), Gaps = 14/407 (3%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ V CN ++ +++N D +Y +M I N ++FNIL FC +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL----------PDLVTY 313
K+ + GF PD+VT+NTL+ C + R+++A L+ M L P ++T+
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITF 224
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
TL+NGLC EG+V EA L ++MV +GL D+V+Y T++ CK G + + +LL +M
Sbjct: 225 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 284
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
I PD I+ K+G A L E+ G++ + Y+ +I C R
Sbjct: 285 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 344
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A LL + + P + +N L+ + K + +A L DEM+ R I P TY ++I
Sbjct: 345 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 404
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
FC R +A + D M PD +I+ YC K V++ LL +++ +
Sbjct: 405 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 460
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+T +YN + + F E +L+ +L + + G P+ +TC +++
Sbjct: 461 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 507
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 164/328 (50%), Gaps = 4/328 (1%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + L+ G P++ + N +++G ++ +M I P+ TFN L K
Sbjct: 314 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 373
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + +++ PD VTYN++I +CK R +DA +++ +M PD+VT
Sbjct: 374 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 429
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ T+++ C+ +V E QL + RGL + +YNTLI +C+ + ++ L EM+
Sbjct: 430 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 489
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G+ PDT TC I++ G+ + +L AL L +Q + + Y+ +I +C+ ++
Sbjct: 490 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 549
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A L + G P ++ YN ++ C +++DA +L +M D +P STY LI
Sbjct: 550 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 609
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDS 520
G +++ L+ EM +G D+
Sbjct: 610 RGCLKAGEIDKSIELISEMRSNGFSGDA 637
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 199/442 (45%), Gaps = 17/442 (3%)
Query: 175 DCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
DCN +V++ + +RK +I S N L+ + + + ++
Sbjct: 108 DCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL 167
Query: 232 GRIGICPNTHTFNILTHVFCKN----------GDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++G P+ TFN L H C G + + +++ E G P ++T+NTL
Sbjct: 168 TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTL 227
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ C +GR+ +A L M + + D+VTY T++NG+CK G + A L +M +
Sbjct: 228 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 287
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V Y+ +I CK+G +++ L EM+ GI P+ FT ++ G+ GR A
Sbjct: 288 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 347
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ ++ ++ ++ LI A ++ + F A L + + P YN ++ C
Sbjct: 348 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 407
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + DA M D P + T+ +I +C R E + L+ E+ G++ ++
Sbjct: 408 KHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 463
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+G+C ++N A+ L DT + N + F E+ L + +EL +
Sbjct: 464 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVI 523
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
+ + +IH + KG
Sbjct: 524 QMSKIDLDTVAYNIIIHGMCKG 545
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 3/242 (1%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
F + D+ P +V+ N +++ + +D+ Q+ E+ R G+ NT T+N L H
Sbjct: 412 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 471
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
FC+ +++ +++ G PD +T N L+ +C+ +L +A L+ ++ + D
Sbjct: 472 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 531
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
V Y +++G+CK KV EA LF + G+ PD+ +YN +I +C + + ++ L +
Sbjct: 532 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 591
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA-LCQD 428
+M NG PD T +++G K G + ++ L+ E++ G S D + +VA L D
Sbjct: 592 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG--FSGDAFTIKMVADLITD 649
Query: 429 NR 430
R
Sbjct: 650 GR 651
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 18/277 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P + Y +++ +N+F A M D S DV F +I
Sbjct: 392 IFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIID-------V 436
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E + R+ G + + N L++G +++ ++ +++EM G+CP+
Sbjct: 437 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 496
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T NIL + FC+N +++ E I+ D D V YN +I CK ++++A+ L+
Sbjct: 497 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 556
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ V PD+ TY +++G C + + +A+ LFH+M G PD +YNTLI K G
Sbjct: 557 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 616
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ +S L+ EM NG D FT +++ +GRL
Sbjct: 617 EIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRL 652
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 10/322 (3%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M R V ++ + + A L+ +M R + +I S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL---------- 400
LI +C K+ S S ++ G PD T ++ G E R+ AL
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+L ++ G++ ++ LI LC + R A +L+ ++ G + Y ++ +
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK AL L +M + +IKP + Y A+I C G +A L EMLE G+ P+
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+I+G+C + A+ LL ++ D ++NA+ + ++G L + +L
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386
Query: 581 FLRLGFAPNNLTCKYMIHSLWK 602
L P+ +T MI+ K
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCK 408
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 216/458 (47%), Gaps = 36/458 (7%)
Query: 179 AYVKVGLIRESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A V G + E+ R+ D P+ S N ++ G+ + +V++EM +
Sbjct: 173 ACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL 232
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N + K GD++ +++ G P+ +TYN L+S C+ GR+ + L
Sbjct: 233 PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 292
Query: 298 YRIMYRRNVLPDLVTYTTL-----------------------------------MNGLCK 322
M + ++PD TY+ L +NGLCK
Sbjct: 293 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 352
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+GKV A ++ +V+ GL P V YNTLI YC+ G+++ + S +M I PD T
Sbjct: 353 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 412
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K R+ +A +L++E+Q GV+ + + ++ LI A + + +L +
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 472
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G P++ Y ++ + CK + +A+ + D+M +++ P+ Y A+I + G +
Sbjct: 473 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 532
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L+++M +G+ P +LI G C + +++AE ++ + I D SYN +
Sbjct: 533 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 592
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ K ++LQ+R + G T +I L
Sbjct: 593 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 630
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 184/388 (47%), Gaps = 1/388 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ SCN LL LL L + + + G P+T +N GD+ + G
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186
Query: 263 LEKIEEEGF-DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ +G P+ +YN +I+ + GR DA ++ M R VLP+ +TY T+++G
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K G + +L +MV GL P+ ++YN L+ C+ G+M E+ +LL EM + PD F
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I+ G + G + L+L + + GV+I L+ LC+D + A +L+ +
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G VP+ IYN L+ C+ + A +M R+IKP TY ALI C R
Sbjct: 367 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A L+ EM ++G+ P + LI+ Y + K +L + + SY ++
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPN 589
N F ++G + + + + PN
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPN 514
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 205/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G + F+ + + G +P+ ++ N LL+GL + + + + +EM + P
Sbjct: 244 GHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 303
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++IL +NGD + K + G T + L++ CK G+++ A +
Sbjct: 304 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 363
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++P V Y TL+NG C+ G++ A F +M R + PD ++YN LI CK
Sbjct: 364 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 423
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ LL EM NG+ P T ++ YG+ G+L ++ E+Q G+ + Y
Sbjct: 424 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 483
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ A C++ + A ++L+ + +P+ ++YN ++++ + A +L ++M
Sbjct: 484 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 543
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I PS+ TY LI C + EA +++ + ++PD+ LI+ C +++K
Sbjct: 544 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 603
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K +Y+ + + G L+++ L ++ ++ P+N M+
Sbjct: 604 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 663
Query: 599 SLWK 602
+ K
Sbjct: 664 AYSK 667
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 174/362 (48%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F K L G +C+ LLNGL K + +V + + G+ P +N L + +C+
Sbjct: 328 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 387
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G+++ +++ PD +TYN LI+ CK R+ +A L M V P + T
Sbjct: 388 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 447
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ TL++ + G++ + + M GL P++VSY +++ A+CK GK+ E+ ++L +M
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ P+ I+ Y + G A LV +++ G+S S Y+ LI LC ++
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A ++ + +P YN L+ + C ++ AL L+ M IK ++ TY LI
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 627
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G GR E L +M+++ ++P + I +++ Y + KAE L +K
Sbjct: 628 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 687
Query: 553 YD 554
+D
Sbjct: 688 HD 689
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 208/432 (48%), Gaps = 12/432 (2%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ P N ++ +C + + G++ L + + ++P + I L DS +
Sbjct: 264 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323
Query: 109 ALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
L+ F ++KN + I + + ++++ L + K S A ++L LV P V ++
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCS--ILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRV-IYN 379
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y + G + +F TF + +P ++ N L+NGL K I +
Sbjct: 380 TLIN-------GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 432
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM G+ P TFN L + + G ++K L +++E G P++V+Y ++++++CK
Sbjct: 433 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 492
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +A + M+ ++VLP+ Y +++ + G +A L +M G+SP IV+
Sbjct: 493 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 552
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN LI C + ++ E++ ++ + + + PD + ++ G + AL+L +
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 612
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
++G+ + Y LI L R L +++ Q+ VPS I+N ++E+ K +
Sbjct: 613 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 672
Query: 468 DALLLKDEMVDR 479
A L+ EM+ +
Sbjct: 673 KAEDLRKEMLQK 684
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 139/307 (45%), Gaps = 15/307 (4%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R LP L + L+ L G+ + + F + G PD ++N + A G + E
Sbjct: 123 RAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGE 182
Query: 364 SKSLLYEMMGNGI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +L M +G P+ F+ +++ G + GR A+ + E+ V + Y+ +I
Sbjct: 183 AVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMI 242
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+ A L +++ G P+ YN L+ LC+ + + L DEM + +
Sbjct: 243 DGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMV 302
Query: 483 PSLSTYRALICCFCGIGRSGEA---VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P TY L F G+ R+G++ +SL + L++G+ C +L+NG C + V+ A
Sbjct: 303 PDGFTYSIL---FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIA 359
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDL----SKLMELQKRFLRLGFAPNNLTCKY 595
E +L + YN + N + + G+L S +++ R ++ P+++T
Sbjct: 360 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK----PDHITYNA 415
Query: 596 MIHSLWK 602
+I+ L K
Sbjct: 416 LINGLCK 422
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 200/390 (51%), Gaps = 12/390 (3%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
L+ Q+D++ A+ F K + S Y ++ L +F M+ L + ++ KD
Sbjct: 106 LIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFK-TMEGLIQ--QMRKD 162
Query: 159 -CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
CP++ +F D+I Y +VG+ E+ K F + L+ G++P N LL L++
Sbjct: 163 GCPYTPGLFVDIIE-------IYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIE 215
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
C++ +++++ GI PNT T+NIL C + + K+ ++G PD+ T
Sbjct: 216 HKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVET 275
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y+ L+ C+K ++ A + M + +PD +TY TL+N LC++ +REA++L +M
Sbjct: 276 YSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMK 335
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G +PD+++YNT+I +C+EG+ ++ +L +M NG P+ + + +V G EG+
Sbjct: 336 VMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFD 395
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A + V E+ G IY LI LC + + A +L + + P ++ L+
Sbjct: 396 EAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLL 455
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+C+ DS +A L D++ + + + S T
Sbjct: 456 MRICE-DSQTEARELVDKLSEDDWRYSWET 484
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 155/342 (45%), Gaps = 2/342 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT-FNILTHVFCKNGDVDK 258
GF+ S + + L+ L + + ++M + G CP T F + ++ + G ++
Sbjct: 128 GFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDG-CPYTPGLFVDIIEIYGEVGMPNE 186
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ E G++P +N L+ + L A L++ ++ + P+ TY L+
Sbjct: 187 AIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIR 246
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
C K+ A+ LF++M +G PD+ +Y+ L+ C++ +++ + +L EM+ G P
Sbjct: 247 AHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVP 306
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ ++ L A L+ +++ G + Y+ +I C++ R A +L
Sbjct: 307 DALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQIL 366
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ ++G +P+ Y L+ LC +A +EM+ P +S Y LI C
Sbjct: 367 RDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNE 426
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
G+ GEA ++ M + + P VL+ C + E
Sbjct: 427 GKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTEARE 468
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 153/333 (45%), Gaps = 7/333 (2%)
Query: 241 HTFNILTHVFCKNGDVDK---VNGFLEKIEEEG--FDPDLVTYNTLISSYCKKGRLNDAF 295
H+++ + CK G + + G ++++ ++G + P L + +I Y + G N+A
Sbjct: 131 HSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGL--FVDIIEIYGEVGMPNEAI 188
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M P + L+ L + + A LF ++ G+SP+ +YN LI A+
Sbjct: 189 KAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAH 248
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C K+ + L +M G PD T I++QG ++ ++ +AL ++ E+ G
Sbjct: 249 CHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDA 308
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ L+ +LC+ A LL ++ G P + YN ++ C+ DA + +
Sbjct: 309 LTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRD 368
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + P+ +YR L+ C G+ EA ++EM+ +G +P I +LI G C E
Sbjct: 369 MPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGK 428
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
V +A +L K+ +++ + ED
Sbjct: 429 VGEACEVLVMMTKQTLAPHESTWSVLLMRICED 461
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 10/266 (3%)
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKS---LLYEMMGNG--IYPDTFTCQIIVQGYGKEG 394
G +Y+TLI CK G+ ++ K+ L+ +M +G P F I++ YG+ G
Sbjct: 128 GFKHSYSTYHTLI---CKLGRARQFKTMEGLIQQMRKDGCPYTPGLFV--DIIEIYGEVG 182
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
A+ ++ FG ++ L++ L + A SL +++ + G P+ YN
Sbjct: 183 MPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYN 242
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ + C D ++ A L ++M + P + TY L+ C + A+ ++DEML
Sbjct: 243 ILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNK 302
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G +PD+ L+N C + ++ +A LL D +YN V F +G
Sbjct: 303 GYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDA 362
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSL 600
++ + G PN L+ + +++ L
Sbjct: 363 CQILRDMPENGCLPNALSYRTLVNGL 388
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 4/203 (1%)
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG--YVPSLEIYNELMESLC 461
V ++ G S Y LI L + + L++++ +DG Y P L + +++E
Sbjct: 122 VASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGL--FVDIIEIYG 179
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ +A+ +M++ +P + L+ A+SL ++ E G+ P+++
Sbjct: 180 EVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTR 239
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+LI +C ++ A L K+ I D E+Y+ + + + +
Sbjct: 240 TYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEM 299
Query: 582 LRLGFAPNNLTCKYMIHSLWKGM 604
L G+ P+ LT +++SL + M
Sbjct: 300 LNKGYVPDALTYNTLLNSLCRKM 322
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/552 (25%), Positives = 245/552 (44%), Gaps = 19/552 (3%)
Query: 57 NPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS-----ALT 111
P+ V I + L S + L + L L + +S VL +SD + A +
Sbjct: 81 QPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVL---KSDEIREKPDIAWS 137
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
FF W + + Y +V +LA ++ +C + + P +V LI
Sbjct: 138 FFCWSRKQKKYTHNLECYVSLVDVLALAKDVD-RIRFICSEIRKF-EFPMTVSPGNSLIK 195
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
++ K+G++ E +RK + G +P++ + NFL+NGL+ +D +V+E M
Sbjct: 196 -------SFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
I P+ T+N + +CK G K L +E +G + D +TY T+I +
Sbjct: 249 ESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDF 308
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+ LY+ M + + ++ ++ GLCKEGK+ E + +F M+ +G P++ Y L
Sbjct: 309 SSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVL 368
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I Y K G ++++ LL+ M+ G PD T ++V G K GR+ A++ + G+
Sbjct: 369 IDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGL 428
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+I+ Y LI L + R A L E + + G YN L+++ K V +AL
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALA 488
Query: 472 LKDEM-VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L M + ++ TY LI R+ EA+ L D M++ G+ P + R L G
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGL 548
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C+ V +A +L A I D + + N + G + + +L G
Sbjct: 549 CLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLADGITERGREVPG 607
Query: 591 LTCKYMIHSLWK 602
MI++L K
Sbjct: 608 RIRTVMINALRK 619
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 70/267 (26%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVS-----------------------CNF----- 210
Y K G + ++ + + +D GF P +V+ C F
Sbjct: 371 GYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAI 430
Query: 211 -------LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
L++GL K +D+ +++EEM G +++ +N L F K+G VD+
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALF 490
Query: 264 EKIEEE-GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL------ 316
+++EEE G D + TY LIS K+ R +A L+ +M + + P L
Sbjct: 491 KRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCL 550
Query: 317 ----------------------------MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+N LCK G+++EA +L + RG
Sbjct: 551 SGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIR 610
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNG 375
+I A K GK + L++ +G G
Sbjct: 611 TVMINALRKVGKADLAMKLMHSKIGIG 637
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 37/388 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K+GL+ + + FR+ +P + + L++GL K + ID+ + +EM G P
Sbjct: 181 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 240
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ TFN+L + CK GD+ +V ++ + +G P+ VTYNT+I+ C KG+L+ A L
Sbjct: 241 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 300
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEG---------------------------------- 324
M +P+ VTY TL+NGL K+G
Sbjct: 301 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 360
Query: 325 -KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K EA L+ +MV +G P+IV Y+ LI C+EGK+ E+K +L EM+ G P+ FT
Sbjct: 361 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 420
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++G+ K G A+ + E+ + + Y LI LC+D + A + +
Sbjct: 421 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 480
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMV--DRNIKPSLSTYRALICCFCGIGRS 501
G P + Y+ ++ LC SV L L +EM+ + + +P + TY L+ C
Sbjct: 481 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 540
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLING 529
A+ L++ ML+ G PD C + +N
Sbjct: 541 SHAIDLLNSMLDRGCNPDLITCNIFLNA 568
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 203/426 (47%), Gaps = 40/426 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYE--EMGRI 234
AY K L ++ + F + +D FQ ++ S N +LN +++ + + YE G+
Sbjct: 108 AYGKAHLPEKAIELFGRMVD-EFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT 166
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
I PN +FN++ CK G VD+ ++ + +PD+ TY TL+ CK+ R+++A
Sbjct: 167 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 226
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L M P VT+ L+NGLCK+G + +L M +G P+ V+YNT+I
Sbjct: 227 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 286
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
C +GK+ ++ SLL M+ + P+ T ++ G K+GR + ++L+ L+ G +
Sbjct: 287 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 346
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI L ++ + A L +++ + G P++ +Y+ L++ LC+ + +A +
Sbjct: 347 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 406
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EMV++ P+ TY +LI F G S +A+ + EM ++ +P+ VLI+G C
Sbjct: 407 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC--- 463
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
EDG L + M + L G P+ +
Sbjct: 464 --------------------------------EDGKLREAMMMWTHMLGRGLRPDVVAYS 491
Query: 595 YMIHSL 600
MIH L
Sbjct: 492 SMIHGL 497
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 139/281 (49%), Gaps = 16/281 (5%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ ++K ++ G QP+IV + L++GL + +D+ ++ EM G PN T++ L
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
F K G+ K +++ + P+ + Y+ LI C+ G+L +A ++ M R +
Sbjct: 425 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 484
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMV--HRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+V Y+++++GLC G V +LF+ M+ PD+V+YN L+ A CK+ + +
Sbjct: 485 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 544
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL M+ G PD TC I L+AL + + G R+ D L+V L
Sbjct: 545 DLLNSMLDRGCNPDLITCNI----------FLNALREKLNPPQDG----REFLDELVVRL 590
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ R A ++E + Q P+ + ++ LCK V
Sbjct: 591 HKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 631
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 29/306 (9%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y ++ L K AM + ++VE K C ++ V+ LI + G + E
Sbjct: 350 YSTLISGLFKEEKSEEAMGLWKKMVE--KGCQPNIVVYSALID-------GLCREGKLDE 400
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + + ++ G P+ + + L+ G K + +V++EM + PN +++L H
Sbjct: 401 AKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIH 460
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY--RRNV 306
C++G + + + G PD+V Y+++I C G + L+ M +
Sbjct: 461 GLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDS 520
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE-GKMQESK 365
PD+VTY L+ LCK+ + A L + M+ RG +PD+++ N + A ++ Q+ +
Sbjct: 521 QPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGR 580
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV-VELQRFGVSISRDIYDYLIVA 424
L E+ V K R++ A ++ V LQ+F + + ++ +I
Sbjct: 581 EFLDEL---------------VVRLHKRQRIVGAAKIIEVMLQKF-LPPNASTWERIIPE 624
Query: 425 LCQDNR 430
LC+ +
Sbjct: 625 LCKPKK 630
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++ L K A ++LCE+V K C + + LI + K
Sbjct: 379 QPNIVVYSALIDGLCREGKLDEAKEILCEMVN--KGCTPNAFTYSSLIK-------GFFK 429
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +++ + +++ P+ + + L++GL + + + ++ M G+ P+
Sbjct: 430 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 489
Query: 243 FNILTHVFCKNGDVD-KVNGFLEKI-EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++ + H C G V+ + F E + +E PD+VTYN L+ + CK+ ++ A L
Sbjct: 490 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNS 549
Query: 301 MYRRNVLPDLVTYTTLMNGL---------------------CKEGKVREAHQLFHRMVHR 339
M R PDL+T +N L K ++ A ++ M+ +
Sbjct: 550 MLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQK 609
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQ 362
L P+ ++ +I CK K+Q
Sbjct: 610 FLPPNASTWERIIPELCKPKKVQ 632
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 219/467 (46%), Gaps = 31/467 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ + C S +F LI AY + G ++K +K D G QP V N L+ G
Sbjct: 361 ITEGCYPSRRIFNSLIH-------AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG 413
Query: 215 ------LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L L+ ++ + Y EM + N + L C G +K + ++
Sbjct: 414 ICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMS 473
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +I C ++++AF L+ M +V+PD+ TYT L++ CK G +++
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ 533
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F MV G +P++V+Y LI AY K KM + L M+ G P+ T ++
Sbjct: 534 ARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID 593
Query: 389 GYGKEGRLLSALNLVVELQRFGVSIS-------------RD----IYDYLIVALCQDNRP 431
G+ K G++ A + + R I RD Y L+ LC+ ++
Sbjct: 594 GHCKSGQIEKACQIYARM-RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A LL+ + +G P+ +Y+ L++ CK + +A ++ +M +R P++ TY +L
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I R A+ ++ MLE+ P+ I +I+G C ++A L+ +K
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGC 772
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ +Y A+ + F + G + K +EL ++ G APN +T + +I+
Sbjct: 773 HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 192/401 (47%), Gaps = 20/401 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +++ R+ + GF P + + ++ L + +D + ++EEM + P+ T
Sbjct: 458 AGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFT 517
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL FCK G + + + +++ +G P++VTY LI +Y K +++ A L+ +M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------PD 344
+P++VTYT L++G CK G++ +A Q++ RM RG + P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM--RGNADIPDVDMYFKIDDGNIRDPN 635
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
I +Y L+ CK K++E++ LL M G P+ ++ G+ K G+L A +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ G + Y LI L +D R A +L R+ ++ P++ IY E+++ LCK
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+A L M ++ P++ TY A+I F G+ + + LM +M G P+ R
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
VLIN C ++ A LL + + Y V F
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF 856
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 189/422 (44%), Gaps = 22/422 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ LL G L+ + +C ++ M G P+ FN L H +C++GD
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKL 391
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLND------AFYLYRIMYRRNVLPDLVTYTTL 316
L+K+ + G P V YN LI C +L A Y M +V+ + V + L
Sbjct: 392 LKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNL 451
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
LC GK +A+ + M+ +G PD +Y+ +I C K+ + L EM N +
Sbjct: 452 ARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHV 511
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD FT I++ + K G L A E+ R G + + Y LI A + + +A
Sbjct: 512 VPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE 571
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV---------------DRNI 481
L E + +G +P++ Y L++ CK + A + M D NI
Sbjct: 572 LFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 482 K-PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P++ TY AL+ C + EA L+D M G P+ + LI+G+C +++A+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +++ + +Y+++ + +D L +++ R L APN + MI L
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751
Query: 601 WK 602
K
Sbjct: 752 CK 753
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 192/451 (42%), Gaps = 51/451 (11%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + L++ K+ + Q + ++EM R G PN T+ L H + K + N
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD------------- 309
E + EG P++VTY LI +CK G++ A +Y M +PD
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 310 ---LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+ TY L++GLCK KV+EA L M G P+ + Y+ LI +CK GK+ E++
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+ +M G P+ +T ++ K+ RL AL ++ + + + IY +I LC
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLC 752
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A L+ + + G P++ Y +++ K V L L +M + P+
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812
Query: 487 TYRALI--CCFCGI----------------------------GRSGE---AVSLMDEMLE 513
TYR LI CC G+ G + E ++ L+DE+ E
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK--KFQIYDTESYNAVFNMFAEDGDL 571
+ +P R+LI+ +C + A L + + D + Y+++ + +
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKV 932
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K EL ++ G P Y++ L +
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIR 963
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 181/404 (44%), Gaps = 9/404 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL + + + D+G++PS ++ N L+ L+ + +D + V+ EM G + +T
Sbjct: 211 GLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTL 270
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
H+ CK G + L IE+E F D V Y +IS C+ +A M
Sbjct: 271 GCFVHLLCKAG---RWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRS 327
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ +P++VTY L+ G ++ ++ ++ M+ G P +N+LI AYC+ G
Sbjct: 328 SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSY 387
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG------VSISRDI 417
+ LL +M G P I++ G +L S L + + +G V +++
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L LC + A S++ + G++P Y++++ LC V +A LL +EM
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ P + TY LI FC +G +A DEM+ G P+ LI+ Y + ++
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
A L + I + +Y A+ + + G + K ++ R
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 231/510 (45%), Gaps = 54/510 (10%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEI-----SRVLLRCQS 104
F+P+T +K++ L+C++ K ++ L + ++P + + I +V L Q
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ- 533
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
A +F+ + D P Y ++H K S A ++ E++ L + C +V
Sbjct: 534 ----ARKWFDEMVRD-GCAPNVVTYTALIHAYLKARKMSSANELF-EMM-LSEGCIPNVV 586
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKT--------LDVGFQ--------PSIVSC 208
+ LI + K G I ++ + + + +D+ F+ P+I +
Sbjct: 587 TYTALID-------GHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTY 639
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L++GL K + + + + + M G PN ++ L FCK G +D+ K+ E
Sbjct: 640 GALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSE 699
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P++ TY++LI K RL+ A + M + P+++ YT +++GLCK GK E
Sbjct: 700 RGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDE 759
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A++L M +G P++V+Y +I + K GK+ + L+ +M G P+ T ++++
Sbjct: 760 AYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLIN 819
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT-SLLERIGQDGYV 447
G L A L+ E+++ Y +I NR F + LL+ I ++ V
Sbjct: 820 HCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF---NREFIISLGLLDEIAENVAV 876
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEM--------VDRNIKPSLSTYRALICCFCGIG 499
P + Y L++S CK + AL L M D+++ Y +LI
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDL------YSSLIESLSLAS 930
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ +A L +M++ G +P+ I L+ G
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKG 960
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 171/403 (42%), Gaps = 48/403 (11%)
Query: 211 LLNGLLKLNCIDQCWQV-YEEMGRI---GICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
LLN L++ C + W V EE+GR+ G P+ T+N L VF + +D ++
Sbjct: 199 LLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREM 258
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ GF+ D T + CK GR +A L + + D V YT +++GLC+
Sbjct: 259 SDSGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLF 315
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA RM P++V+Y L+ ++ ++ K +L M+ G YP
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYP-------- 367
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
SR I++ LI A C+ A LL+++G G
Sbjct: 368 ---------------------------SRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 447 VPSLEIYNELMESLCKCDSVA--DALLLKD----EMVDRNIKPSLSTYRALICCFCGIGR 500
P +YN L+ +C + + D L L + EM+D ++ + L C CG G+
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
+A S++ EM+ G +PD+ +I C V+ A L + D +Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + F + G L + + +R G APN +T +IH+ K
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 90/258 (34%), Gaps = 46/258 (17%)
Query: 389 GYGKEGRLLSAL--------------NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
GYG G + AL + E++ I + + LI C++ A
Sbjct: 157 GYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVA 216
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L R+ GY PS YN L+ + D + A L+ EM D T +
Sbjct: 217 LEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHL 276
Query: 495 FCGIGRSGEAVSLMDE--------------------------------MLESGMLPDSQI 522
C GR EA++L+++ M S +P+
Sbjct: 277 LCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
R+L+ G ++ + + + +L + +N++ + + GD S +L K+
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396
Query: 583 RLGFAPNNLTCKYMIHSL 600
G P + +I +
Sbjct: 397 DCGCQPGYVVYNILIGGI 414
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 211/483 (43%), Gaps = 76/483 (15%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTH 241
G + + F + G PSI +C+ L+ L +D +V+ EM R G + P+ H
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVH 212
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + C+ G++D L ++ G P +VTYN L+ + CK GR+ +AF L M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272
Query: 302 YRRNVLPDLVTYTTLMNGL-----------------------------------CKEGKV 326
V P +VT+ L++GL C++G
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTCQ 384
EA +LF MV +G+ +V+YN + A CKEG+M+ ++ +L EM+ G ++ F
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSV 392
Query: 385 IIVQGYGKEGRLLSALNLVVE-LQRF---------------------------------- 409
+ G GRL L L+ E L RF
Sbjct: 393 VAWHLRGT-GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGK 451
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ ++ + LI LCQ N AT +L+ + G YN +++ CK + +A
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEA 511
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ L+D+M+ R KP L T+ + +C +G+ E + L+D+M G+ PD +I+G
Sbjct: 512 IQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDG 571
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
YC KD++KA L K + YNA+ + +G++S + + G P
Sbjct: 572 YCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPT 631
Query: 590 NLT 592
+T
Sbjct: 632 PVT 634
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 201/448 (44%), Gaps = 26/448 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCE--LVELVKDCPHSVDVFQDLISCTEDCNWA 179
IK T Y LI L + A K+L E L ++ C +F +++ W
Sbjct: 347 IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHC----SLFNSVVA------WH 396
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
G + + R+ L +P+ + L K ++ +++ ++ G+ N
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T N L H C+ ++ + L+ + G + D +TYN +I CK ++++A L
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +R PDL T+ ++ C GKV E L +M GL PDIV+Y T+I YCK
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
M ++ L E+M NG+ P+ ++ GYG+ G + A+ ++ ++ G+ + Y+
Sbjct: 577 DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYN 636
Query: 420 YLIVALCQDNRPFAATSLLERIG---QDGYVPSLEI----YNELMESLCKCDSVADALLL 472
L+ +C L+E + V +E+ Y +++ CK + +A++
Sbjct: 637 SLMYWMCH-------AGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMY 689
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM R I P+ TY L+ + G EA L DEM+ G++PDS LI+G+C
Sbjct: 690 FKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNA 560
++K + + D SYNA
Sbjct: 750 VDSLDKMVESPAEMSSQVLKQDGCSYNA 777
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 210/491 (42%), Gaps = 45/491 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P+ + +++ LA +F +L E+ + P+ V ++ ++I W +
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEM-QGFGITPNEV-IYNEMI------GW-HC 327
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM---------- 231
+ G E+ K F + + G + ++V+ N + L K ++ ++ +EM
Sbjct: 328 RKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCS 387
Query: 232 -------------GRIGIC-------------PNTHTFNILTHVFCKNGDVDKVNGFLEK 265
GR+ + PN CK+G ++ +
Sbjct: 388 LFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQ 447
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ +G ++ T N LI C+ + +A + + M V D +TY ++ G CK K
Sbjct: 448 VLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASK 507
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA QL M+ RG PD+ ++N + YC GK++E LL +M G+ PD T
Sbjct: 508 MDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGT 567
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
I+ GY K + A + EL + G+ + IY+ LI ++ A +L+ + +G
Sbjct: 568 IIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNG 627
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+ YN LM +C V + + + + ++I+ + Y +I FC IG+ EAV
Sbjct: 628 IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAV 687
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
EM G+ P+ L+ Y + +A L + D+ SYN + + F
Sbjct: 688 MYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747
Query: 566 AEDGDLSKLME 576
E L K++E
Sbjct: 748 CEVDSLDKMVE 758
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 157/308 (50%), Gaps = 2/308 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++E+ K + ++ G + ++ N ++ G K + +D+ Q+ ++M + G P+ TFNI
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRIMYRR 304
H +C G V+++ L++++ EG PD+VTY T+I YCK ++ A YL +M +
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELM-KN 591
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ P+ V Y L+ G + G + +A + M + G+ P V+YN+L++ C G ++E
Sbjct: 592 GLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEV 651
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
K++ + + I II+QG+ K G++ A+ E+ G+ ++ Y L+ A
Sbjct: 652 KAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFA 711
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
+ A+ L + + G VP YN L+ C+ DS+ + EM + +K
Sbjct: 712 YSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQD 771
Query: 485 LSTYRALI 492
+Y A +
Sbjct: 772 GCSYNAFV 779
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 204/425 (48%), Gaps = 23/425 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I +L L+K+NC ++ +M GI N T NIL + F + G
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117
Query: 263 LEKIEEEGFDPDLVT-------------YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
I ++G+DP+++T Y TLI+ CK G+ A L R + + V P+
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+V Y T+++ +CK V EA L+ MV G+SPD+V+Y+ LI + GK++++ L
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M+ I PD +T I+V G+ K+G++ + + + G+ + Y L+ C
Sbjct: 238 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ A S+ + Q G P + YN ++ CK V +A+ L +M +NI P++ TY
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL------ 543
+LI C G+ A+ L+DEM + G+ PD +++ C V+KA ALL
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417
Query: 544 ---GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F K + + D +Y + F G ++ + L + G P+ T + +I SL
Sbjct: 418 VFEDLFVKGYNL-DVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSL 476
Query: 601 WKGME 605
+K E
Sbjct: 477 FKKDE 481
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 205/404 (50%), Gaps = 36/404 (8%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
SF F L G+ P++++ L+ GL C +V ++ L +
Sbjct: 114 SFSVFANILKKGYDPNVITLTTLIKGL--------CLKV--------------SYGTLIN 151
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G L +++ + P++V YNT+I S CK +N+AF LY M + P
Sbjct: 152 GLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISP 211
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+VTY+ L++G GK+++A LF++M+ + PD+ ++N L+ +CK+GKM+E K++
Sbjct: 212 DVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 271
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
MM GI P+ T ++ GY ++ A ++ + + GV+ Y+ +I C+
Sbjct: 272 AMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKI 331
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A +L +++ +P++ Y L++ LCK ++ AL L DEM DR + P + TY
Sbjct: 332 KKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITY 391
Query: 489 RALICCFCGIGRSGEAVSLM----DEMLE----SGMLPDSQICRVLINGYCMEKDVNKAE 540
+++ C + +A++L+ D++ E G D V+I G+C++ N+A
Sbjct: 392 SSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEAL 451
Query: 541 ALLGFFAKKFQIYDTESYN-AVFNMFAEDGDLSKLMELQKRFLR 583
ALL +I D ++Y + ++F +D + ++ ++ LR
Sbjct: 452 ALLSKMEDNGRIPDAKTYEIIILSLFKKDEN-----DMAEKLLR 490
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 171/344 (49%), Gaps = 8/344 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + + R+ QP++V N +++ + K+ +++ + +Y EM GI P+
Sbjct: 155 KVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVV 214
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F G + K+ E PD+ T+N L+ +CK G++ + ++ +M
Sbjct: 215 TYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 274
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ + P++VTY +LM+G C +V +A+ +F+ M G++PD SYN +I +CK K+
Sbjct: 275 MKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKV 334
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +L +M I P+ T ++ G K G++ AL LV E+ GV Y +
Sbjct: 335 DEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSI 394
Query: 422 IVALCQDNRPFAATSLLERIGQD--------GYVPSLEIYNELMESLCKCDSVADALLLK 473
+ ALC++++ A +LL ++ GY + Y +++ C +AL L
Sbjct: 395 LDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALL 454
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+M D P TY +I + A L+ EM+ G+L
Sbjct: 455 SKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 120/217 (55%), Gaps = 8/217 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G ++E F + G +P++V+ L++G + +++ ++ M + G+ P
Sbjct: 257 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNP 316
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T ++NI+ + FCK VD+ +K+ + P++VTY +LI CK G+++ A L
Sbjct: 317 DTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLV 376
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREA--------HQLFHRMVHRGLSPDIVSYNT 350
M+ R V PD++TY+++++ LCK +V +A Q+F + +G + D+ +Y
Sbjct: 377 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTV 436
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+I +C +G E+ +LL +M NG PD T +II+
Sbjct: 437 MIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIII 473
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 165/362 (45%), Gaps = 24/362 (6%)
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T N +T + KN + + V+ F + ++ P + + ++ S K + A L+R
Sbjct: 28 YTLNYITII--KNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQ 85
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + +LVT L+N + G+ + +F ++ +G P++++ TLI C +
Sbjct: 86 MELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK-- 143
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ G K G+ +AL L+ + V + +Y+
Sbjct: 144 --------------------VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNT 183
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ++C+ A L + +G P + Y+ L+ + DA+ L ++M+ N
Sbjct: 184 IIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN 243
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
IKP + T+ L+ FC G+ E ++ M++ G+ P+ L++GYC+ K VNKA
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ A+ DT+SYN + N F + + + M L K+ PN +T +I L
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGL 363
Query: 601 WK 602
K
Sbjct: 364 CK 365
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 90/219 (41%), Gaps = 14/219 (6%)
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L +L L+ Q S + IY + + +++ +S + Q P + + +
Sbjct: 7 LFLSLFLIFNFQTLNSSFQQ-IYTLNYITIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGK 65
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++ SL K + A+ L +M + I +L T LI CF +G++ + S+ +L+ G
Sbjct: 66 ILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKG 125
Query: 516 MLPDSQICRVLINGYCMEKD----------VNKAEALLGFFAK---KFQIYDTESYNAVF 562
P+ LI G C++ V +A A L + K + YN +
Sbjct: 126 YDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTII 185
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ + +++ +L + G +P+ +T +I +
Sbjct: 186 DSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFF 224
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 194/401 (48%), Gaps = 11/401 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN-------- 177
+YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 15 SYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 73
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE G
Sbjct: 74 TAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYP 133
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H F K G++ + I + P +V++NTL++ Y K G L++ F L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI +CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+ +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C++ A +++ ++ Y L+ LC+ DA + EM+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+KP + TY +I FC G L+ EM G +P
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + +M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +K+ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +K+ ++ +++ +I L
Sbjct: 330 AFEYRKKMIKENIRLDDVAYTALISGL 356
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 20/308 (6%)
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNT 350
+L +Y T+++ LC + EA L +V R DI ++
Sbjct: 12 NLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI AY + G ++++ Y + + F TC+ +++ K E
Sbjct: 72 LITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 590 NLTCKYMI 597
+T +I
Sbjct: 311 KITYTTLI 318
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 194/392 (49%), Gaps = 10/392 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P I S N LL GL K+N Q + +Y +M G+ P+ T NIL + C V +
Sbjct: 88 PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAA 147
Query: 263 LEKIEEEGFDPDLVTYNTLISSY---CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ I G+ PD+VTYNTLI CK G ++A ++ M + ++P++++Y++L++G
Sbjct: 148 MTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 207
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK---MQESKSLLYEMMGNGI 376
C GK+ E+ +LF+ MV +G+ P++V +N LI CKEGK + ++ L M G
Sbjct: 208 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGC 267
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+ + I++ GY K ++ A+NL E+ + G + Y L+ L Q + A
Sbjct: 268 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 327
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L + G IY ++ LCK + +A+ L +E+ N K +Y LI C
Sbjct: 328 LFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC 387
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ---IY 553
G+ A ++ + G+ P+ C ++I+G+C + V+KA L K +
Sbjct: 388 KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTP 447
Query: 554 DTESYNAVFNMFAEDGDLSKLME-LQKRFLRL 584
D +YN + F E L +++ L K F R+
Sbjct: 448 DIITYNTLLRGFCESNKLEEVVNLLHKMFKRM 479
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 226/483 (46%), Gaps = 38/483 (7%)
Query: 43 SLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRC 102
+LS+P+ + +P+T + N ++ + +G S H +S L C
Sbjct: 21 TLSSPIPSSVPQTSSTNHPNPILLAFNDRGISF----------------QHRLSSFLRNC 64
Query: 103 QS---DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
++ D + A FF+ + I P SS + ++ LA N +S L L ++
Sbjct: 65 KTGNIDVIQAFHFFDLMMRSHPIPPISS-FNRLLGGLAKINHYS----QLFSLYNKMRLA 119
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL--- 216
S D+F I CN V GL L G+ P IV+ N L+ GL
Sbjct: 120 GLSPDLFTLNILANCLCNLNRVSEGL-----AAMTGILRRGYIPDIVTYNTLIKGLYGLC 174
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K+ D+ +++EEM G+ PN +++ L H FC G +++ ++ ++G P+LV
Sbjct: 175 KVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLV 234
Query: 277 TYNTLISSYCKKGRLND---AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+N LI CK+G++ D A L+ M + + ++YT L+NG CK KV EA L+
Sbjct: 235 QFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLY 294
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ M G P++ +Y+TL+ + GK+ ++ L M +GI D+ I + G K
Sbjct: 295 NEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKN 354
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L A+ L EL+ + + + Y LI LC+ + A +++ Q+G P++
Sbjct: 355 GVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTC 414
Query: 454 NELMESLCKCDSVADALLL---KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
N ++ C+ + V A +L ++M + P + TY L+ FC + E V+L+ +
Sbjct: 415 NIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHK 474
Query: 511 MLE 513
M +
Sbjct: 475 MFK 477
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 170/384 (44%), Gaps = 37/384 (9%)
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
Q + ++ M R P +FN L K ++ K+ G PDL T N L
Sbjct: 73 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILA 132
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL---CKEGKVREAHQLFHRMVHR 339
+ C R+++ + RR +PD+VTY TL+ GL CK G EA ++F M +
Sbjct: 133 NCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQ 192
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+ P+++SY++L+ +C GK++ESK L EM+ G+ P+ +++ KEG++
Sbjct: 193 GMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGD- 251
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI-YNELME 458
+S +R ++ + C+ N EI Y L+
Sbjct: 252 -----------LSSARKLFLSMPSKGCEHN---------------------EISYTILIN 279
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK V +A+ L +EM +P++ TY L+ G+ G+A L M SG+
Sbjct: 280 GYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISV 339
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
DS I + ++G C + +A L D ESY+ + + + G + E
Sbjct: 340 DSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFF 399
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
K+ + G PN +TC MIH +
Sbjct: 400 KQLSQEGLQPNVVTCNIMIHGFCR 423
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTQQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A+ LF M+ +GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLX 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM++ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 153/272 (56%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ ++G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M+ +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A + E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 133/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQVSGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA +L DEM+D+ + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML+ G++P+ LI+G+
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L + G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 191 FRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 140/584 (23%), Positives = 256/584 (43%), Gaps = 63/584 (10%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
FL TQ+ + +++ LK G L DL + RVL + + V A
Sbjct: 8 GFLRPTQD---VAEILLGILKPG----PYLCRDLAGYASTVTPEVAGRVLQQVEDPDV-A 59
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
TFF W N + + ++++ + A ++L E +E + F +
Sbjct: 60 WTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPL--------CFPNE 111
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
I T N + K G + ++F+ + + G + ++ + L+ GL + ID+ + ++
Sbjct: 112 IMYTTVIN-GFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFK 170
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-----GFDPDLVTYNTLISS 284
MG PN T+N + + CK +D+ + +E+ G +PD+++Y+T+I +
Sbjct: 171 SMGE-ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDA 229
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE---------------- 328
CK R++ A+ ++ M P++VTY++L++GLCK + E
Sbjct: 230 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGIN 289
Query: 329 -------------------AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
A Q F R++ G P++V+YN + CK G++ E+ +L
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILL 349
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM+ + + PD T I+ G+ K GR+ A ++ + + L+ +
Sbjct: 350 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 409
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ A + E + G++P L+ YN LM+ +C DSV AL + +M + +P +TY
Sbjct: 410 KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYA 469
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI C C R EA +D M ++P+ IC L+ C + +V++A ++L +
Sbjct: 470 PLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE- 528
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR-LGFAPNNLT 592
+ F + E+ L K E + LR GF + T
Sbjct: 529 ---VGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAAT 569
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 6/409 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GFQ + +C LLN +K ++ ++ +E PN + + + FCK G VD+
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L++++E G D++ ++TLI C+KGR+++A ++ M P+++TY T++NG
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189
Query: 320 LCKEGKVREAHQLFHRMVHR-----GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
LCK ++ EA +LF M R G PD++SY+T+I A CK ++ ++ M
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G P+ T ++ G K R L L++ ++ G I+ ++ ++ AL +++ A
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKA 309
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
ER+ + G P++ YN + LCK V +A + EMV+ + P + TY ++I
Sbjct: 310 CQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDG 369
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
FC GR +A + M+ +P L++G+ K +A + I
Sbjct: 370 FCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPG 429
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++YN + + + +E+ + R P+ T +I L +
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRA 478
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 210/463 (45%), Gaps = 45/463 (9%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL---VELVKDCPHSVDVFQDLISCTEDCN 177
E P Y +V+ L N+ A+++ ++ E C V + +I
Sbjct: 175 ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVID------ 228
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A K + ++++ F++ VG P++V+ + L++GL K++ +C ++ M G
Sbjct: 229 -ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N FN + H KN + +K F E++ + G P++VTYN + CK GR+++A+ +
Sbjct: 288 INIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRI 347
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M V PD++TY+++++G CK G++ +A +F RM+ P V++ TL+ + +
Sbjct: 348 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSE 407
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
K +E+ + +M+ G P T +++ + SAL + +++R +
Sbjct: 408 HKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNT 467
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI LC+ R A L+ + D VP+ I + L+E LCK V +A + D +V
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527
Query: 478 DRNIKP--------------------------------SLSTYRALICCFCGIGRSGEAV 505
+ +P +TY + C G+ EAV
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAV 587
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++++M+ G+ PD ++ C +++ E+ + F K
Sbjct: 588 EVIEQMVLKGVRPDEGTYVAVLRSLC---GLDRVESAIAEFEK 627
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 162/366 (44%), Gaps = 32/366 (8%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + L G +P++V+ N ++GL K +D+ +++ EM + P+ T++ + FCK
Sbjct: 313 FERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 372
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G +DK + ++ P VT+ TL+ + + + +AF ++ M +P L T
Sbjct: 373 AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQT 432
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y LM+ +C V A +++H+M + PD +Y LI C+ ++ E+K L M
Sbjct: 433 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVME 492
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRL---LSALNLVVE------------------------ 405
+ + P+ C +V+ K+G + S L+ VVE
Sbjct: 493 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWE 552
Query: 406 -----LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L+ G Y + +C+ +P A ++E++ G P Y ++ SL
Sbjct: 553 AASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSL 612
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C D V A+ ++M R P L TY LI C + EA + + M+ +G P +
Sbjct: 613 CGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQA 672
Query: 521 QICRVL 526
Q R L
Sbjct: 673 QTMRTL 678
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 157/377 (41%), Gaps = 12/377 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP Y + VH L + A ++L E+VE V D+I+ + + + K
Sbjct: 322 KPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE--------SKVTPDVITYSSIID-GFCK 372
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + ++ F + + P V+ LL+G + + ++V+E+M G P T
Sbjct: 373 AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQT 432
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N+L C V+ K++ + PD TY LI C+ R+++A +M
Sbjct: 433 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVME 492
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
NV+P+ L+ LCK+G+V EA + +V G P ++ L+ K +
Sbjct: 493 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWE 552
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL G D T + V K G+ A+ ++ ++ GV Y ++
Sbjct: 553 AASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+LC +R +A + E++ G P L Y L+ C D +A + + MV
Sbjct: 610 RSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFT 669
Query: 483 PSLSTYRALICCFCGIG 499
P T R L C G
Sbjct: 670 PQAQTMRTLSSCLRDAG 686
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 41/273 (15%)
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G + + L+ A+ K + +E+ LL E + +P+ ++ G+ K G++ A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L+ E++ GV + ++ LI LC+ R A + +G++ P++ YN ++
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECS-PNVITYNTVVNG 189
Query: 460 LCKCDSVADALLLKDEMVDR-----NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
LCK + + +AL L D+M R +P + +Y +I C R +A M
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G P+ LI+G C V++ S+
Sbjct: 250 GCAPNVVTYSSLIDGLC---KVDRP--------------------------------SEC 274
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+EL GF N + M+H+LWK E++
Sbjct: 275 LELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 37/388 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K+GL+ + + FR+ +P + + L++GL K + ID+ + +EM G P
Sbjct: 197 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 256
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ TFN+L + CK GD+ +V ++ + +G P+ VTYNT+I+ C KG+L+ A L
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 316
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEG---------------------------------- 324
M +P+ VTY TL+NGL K+G
Sbjct: 317 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 376
Query: 325 -KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
K EA L+ +MV +G P+IV Y+ LI C+EGK+ E+K +L EM+ G P+ FT
Sbjct: 377 EKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTY 436
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++G+ K G A+ + E+ + + Y LI LC+D + A + +
Sbjct: 437 SSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLG 496
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMV--DRNIKPSLSTYRALICCFCGIGRS 501
G P + Y+ ++ LC SV L L +EM+ + + +P + TY L+ C
Sbjct: 497 RGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSI 556
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLING 529
A+ L++ ML+ G PD C + +N
Sbjct: 557 SHAIDLLNSMLDRGCNPDLITCNIFLNA 584
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 203/426 (47%), Gaps = 40/426 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYE--EMGRI 234
AY K L ++ + F + +D FQ ++ S N +LN +++ + + YE G+
Sbjct: 124 AYGKAHLPEKAIELFGRMVD-EFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT 182
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
I PN +FN++ CK G VD+ ++ + +PD+ TY TL+ CK+ R+++A
Sbjct: 183 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L M P VT+ L+NGLCK+G + +L M +G P+ V+YNT+I
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 302
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
C +GK+ ++ SLL M+ + P+ T ++ G K+GR + ++L+ L+ G +
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHAN 362
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
Y LI L ++ + A L +++ + G P++ +Y+ L++ LC+ + +A +
Sbjct: 363 EYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILC 422
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EMV++ P+ TY +LI F G S +A+ + EM ++ +P+ VLI+G C
Sbjct: 423 EMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC--- 479
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
EDG L + M + L G P+ +
Sbjct: 480 --------------------------------EDGKLREAMMMWTHMLGRGLRPDVVAYS 507
Query: 595 YMIHSL 600
MIH L
Sbjct: 508 SMIHGL 513
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 139/281 (49%), Gaps = 16/281 (5%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ ++K ++ G QP+IV + L++GL + +D+ ++ EM G PN T++ L
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
F K G+ K +++ + P+ + Y+ LI C+ G+L +A ++ M R +
Sbjct: 441 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 500
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMV--HRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+V Y+++++GLC G V +LF+ M+ PD+V+YN L+ A CK+ + +
Sbjct: 501 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 560
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL M+ G PD TC I L+AL + + G R+ D L+V L
Sbjct: 561 DLLNSMLDRGCNPDLITCNI----------FLNALREKLNPPQDG----REFLDELVVRL 606
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ R A ++E + Q P+ + ++ LCK V
Sbjct: 607 HKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKV 647
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 138/305 (45%), Gaps = 27/305 (8%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y ++ L K AM + ++VE K C ++ V+ LI + G + E
Sbjct: 366 YSTLISGLFKEEKSEEAMGLWKKMVE--KGCQPNIVVYSALID-------GLCREGKLDE 416
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + + ++ G P+ + + L+ G K + +V++EM + PN +++L H
Sbjct: 417 AKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIH 476
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY--RRNV 306
C++G + + + G PD+V Y+++I C G + L+ M +
Sbjct: 477 GLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDS 536
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD+VTY L+ LCK+ + A L + M+ RG +PD+++ N + A
Sbjct: 537 QPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNA------------ 584
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV-VELQRFGVSISRDIYDYLIVAL 425
L E + F +++V+ + K R++ A ++ V LQ+F + + ++ +I L
Sbjct: 585 -LREKLNPPQDGREFLDELVVRLH-KRQRIVGAAKIIEVMLQKF-LPPNASTWERIIPEL 641
Query: 426 CQDNR 430
C+ +
Sbjct: 642 CKPKK 646
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 32/263 (12%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++ L K A ++LCE+V K C + + LI + K
Sbjct: 395 QPNIVVYSALIDGLCREGKLDEAKEILCEMVN--KGCTPNAFTYSSLIK-------GFFK 445
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +++ + +++ P+ + + L++GL + + + ++ M G+ P+
Sbjct: 446 TGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVA 505
Query: 243 FNILTHVFCKNGDVD-KVNGFLEKI-EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++ + H C G V+ + F E + +E PD+VTYN L+ + CK+ ++ A L
Sbjct: 506 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNS 565
Query: 301 MYRRNVLPDLVTYTTLMNGL---------------------CKEGKVREAHQLFHRMVHR 339
M R PDL+T +N L K ++ A ++ M+ +
Sbjct: 566 MLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQK 625
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQ 362
L P+ ++ +I CK K+Q
Sbjct: 626 FLPPNASTWERIIPELCKPKKVQ 648
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 218/447 (48%), Gaps = 14/447 (3%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P + +V + +++ A+ + G + E+ + G + + N++L L+
Sbjct: 108 PMAHEVMRGMVA-------AFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETG 160
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+V++ M R G+CP+ +F L V C+ G V++V+ L + GF D T
Sbjct: 161 SFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCT 220
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
++ S C+KGR D +R M P++V YT ++GLCK V++A + MV R
Sbjct: 221 VVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 280
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLS 398
GL P++ ++ TLI CK G + + L +++ + Y P+ T +++ GY +EG+L
Sbjct: 281 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 340
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L+V + G+ + + Y LI C+ A L+ ++ Q+G++P++ YN +++
Sbjct: 341 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 400
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK + +A + + +K TY LI C G A+ L D M+E+G P
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 460
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVFNMFAEDGDLSKLM 575
D + LI+ YC ++ + +++ FF K I ++Y ++ + + G + +
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQK---FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLAL 517
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +R ++ G +++T +I L K
Sbjct: 518 RVFERMVQNGCFADSITYGALISGLCK 544
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 203/421 (48%), Gaps = 6/421 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + FR+ L+ G P++V+ ++GL K + Q + V EEM G+ PN +T
Sbjct: 230 GRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 289
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G ++ FL+ I+ + P++ TY +I YC++G+L A L M
Sbjct: 290 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMV 349
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P+ TYTTL+ G CK G A +L ++M G P+I +YN +I +CK+GK+Q
Sbjct: 350 EQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ 409
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ +L G+ D T I++ + K+G + AL+L + G + Y LI
Sbjct: 410 EAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLI 469
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
CQ + + ++ G +P+ + Y ++ CK AL + + MV
Sbjct: 470 STYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCF 529
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN-GYCMEKDVNKAEA 541
TY ALI C R EA +L + ML+ ++P ++ RV + YC + + A +
Sbjct: 530 ADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP-CEVTRVTLTFEYCRREKTSIAVS 588
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K+ Q++ + + V + GD+ K+ L +A ++ T I+S +
Sbjct: 589 VLDRLDKRQQVH---TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCY 645
Query: 602 K 602
+
Sbjct: 646 E 646
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 1/300 (0%)
Query: 182 KVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+G +F+ F K + ++P++ + ++ G + + + + M G+ PNT
Sbjct: 298 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 357
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L CK G D+ + K+++EGF P++ TYN +I +CKKG++ +A+ + R+
Sbjct: 358 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 417
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + D +TYT L+ CK+G + A LF RMV G PDI +Y +LI YC++ +
Sbjct: 418 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 477
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+ES+ + + G+ P T ++ GY K GR AL + + + G Y
Sbjct: 478 MEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGA 537
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+++R A +L E + VP L C+ + + A+ + D + R
Sbjct: 538 LISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 597
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 9/317 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + + + ++ G +P+ + L+ G K D+ +++ +M + G P
Sbjct: 331 GYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLP 390
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+N + FCK G + + L +G D +TY LI+ +CK+G + A L+
Sbjct: 391 NIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF 450
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M PD+ YT+L++ C++ ++ E+ + F + + GL P +Y ++I YCK
Sbjct: 451 DRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKV 510
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL---VVELQRFGVSISR 415
G+ + + M+ NG + D+ T ++ G KE RL A L +++ + ++R
Sbjct: 511 GRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTR 570
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
L C+ + A S+L+R+ + V ++++ + +L D A +L LK +
Sbjct: 571 VT---LTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVD--AASLFLK-K 624
Query: 476 MVDRNIKPSLSTYRALI 492
++D + +TY I
Sbjct: 625 VLDEDYAVDHATYTGFI 641
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 234/513 (45%), Gaps = 50/513 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y +++ L + A ++L E+ E K +V F +I+ +V
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE--KSISPNVVTFSSVIN-------GFV 425
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL+ ++ + R + G P++V+ L++G K D +VY +M G+ N
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKF 485
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + +NG +++ + G D V Y TLI K G + AF + +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RN+LPD V Y +N LC GK +EA M + GL PD +YNT+I ++C++G+
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG-------------------------RL 396
++ LL+EM + I P+ T +V G G R+
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665
Query: 397 LSA------LNLVVELQRF----GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
L A L++++++ + G+ +Y+ L+ LC AT +LE + G
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P +N L+ CK + +A +M+ +NI P+++T+ L+ +GR GEA +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYNAVFNM 564
++ EM +SG+ P++ +L G+ K NK EA+ + K + +YNA+ +
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGH--GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
F + G +++ EL K + G P +C Y I
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPT--SCTYDI 874
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 221/508 (43%), Gaps = 52/508 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P YC ++ LA + + +L E+V S V DL++ T +W K
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMV--------SRGVVMDLVTYTALMDW-LGKQ 357
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E T R L P+ V+ L++ L K + +D+ QV EM I PN TF
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK---------------- 287
+ + + F K G +DK + ++E G +P++VTY TLI + K
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477
Query: 288 -------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G++ +A L++ + D V YTTL++GL K G +
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + ++ R + PD V YN I C GK +E+KS L EM G+ PD T ++
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ ++G AL L+ E++ + + Y+ L+ L A LL + G+ P
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S + ++++ + + L + + M++ + ++ Y L+ C G + +A ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EML SG+ PD+ LI G+C ++ A A + + ++N +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 569 GDLSK----LMELQKRFLRLGFAPNNLT 592
G + + L+E++K G PNNLT
Sbjct: 778 GRIGEAGTVLIEMEKS----GLEPNNLT 801
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 193/420 (45%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E+F + + G +V+ + L+ GL + + + ++ EM ++G PN
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN 308
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L K G ++ L ++ G DLVTY L+ K+G+ ++ R
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
N+ P+ VTYT L++ LCK V EA Q+ M + +SP++V+++++I + K G
Sbjct: 369 FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ M GI P+ T ++ G+ K +AL + ++ GV +++ I D
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L Q+ + A +L + G Y L++ L K + A E++DR
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P Y I C C +G+ EA S + EM G+ PD +I +C + + KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL + +YN + G + K L + GF+P++LT + ++ +
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 177/378 (46%), Gaps = 8/378 (2%)
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
V + M G+ + +N L FC+ G VD G L+ ++E G DP++ TY I YC
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+ + +AF LY M R VL D+VT + L+ GLC++G+ EA+ LF M G +P+ V
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y TLI + K G+ +E SLL EM+ G+ D T ++ GK+G+ + V +
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK----TDEVKDT 366
Query: 407 QRFGVSISRD----IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
RF +S + Y LI ALC+ + A +L + + P++ ++ ++ K
Sbjct: 367 LRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVK 426
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ A K M +R I P++ TY LI F A+ + +ML G+ + I
Sbjct: 427 RGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFI 486
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L+NG + +A AL + D +Y + + + GD+ + + +
Sbjct: 487 VDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELM 546
Query: 583 RLGFAPNNLTCKYMIHSL 600
P+ + I+ L
Sbjct: 547 DRNMLPDAVVYNVFINCL 564
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 162/349 (46%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + +FK ++ +D P V N +N L L + EM +G+ P+
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQS 590
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C+ G+ K L +++ P+L+TYNTL++ G + A YL M
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEM 650
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P +T+ ++ + ++ + M++ GL DI YNTL+ C G
Sbjct: 651 VSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMT 710
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +L EM+G+GI PDT T ++ G+ K L +A ++ +S + ++ L
Sbjct: 711 RKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTL 770
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L R A ++L + + G P+ Y+ L K + +A+ L EMV +
Sbjct: 771 LGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGF 830
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
P +STY ALI F G +A L +M + G+ P S +L++G+
Sbjct: 831 VPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 6/366 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T +NIL + V L ++ + G D VT NTL++ C+ G++
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQV--DAAA 155
Query: 298 YRIMYRRNVLPDLVTYTTL-MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ P + + TL + + G A + RM +GL D+V YNTL+ +C
Sbjct: 156 ALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ G++ ++ +L M G+ P+ T + Y + + A +L + R GV +
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
L+ LC+D R A +L + + G P+ Y L++SL K + L L EM
Sbjct: 276 TLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM 335
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V R + L TY AL+ G++ E + L + P+ VLI+ C +V
Sbjct: 336 VSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNV 395
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++AE +L +K + ++++V N F + G L K E ++ G PN +T +
Sbjct: 396 DEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTL 455
Query: 597 IHSLWK 602
I +K
Sbjct: 456 IDGFFK 461
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 141/329 (42%), Gaps = 39/329 (11%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P++++ N L+ GL +++ + EM G P++ T + ++ +D +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
E + G D+ YNTL+ C G A + M + PD +T+ L+ G
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK + A + +M+H+ +SP+I ++NTL+ G++ E+ ++L EM +G+ P+
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T I+ G+GK+ + A+ L E+
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEM---------------------------------- 825
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+G+ G+VP + YN L+ K + A L +M R + P+ TY L+ + I
Sbjct: 826 VGK-GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884
Query: 501 SGEAVSLMDEMLESGMLPD----SQICRV 525
E + +M E G P S ICR
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRA 913
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 225/504 (44%), Gaps = 88/504 (17%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELV----------------ELVKDCPHSVDVFQD 168
T + I+H+L +N FS + +L +L+ EL + PH +D F
Sbjct: 24 THQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQ--PH-LDSFPT 80
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+ E A+V+ L ++ + + G P + N LL L+K N ++ W+V+
Sbjct: 81 HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140
Query: 229 EE----------------------------------MGRIGICPNTHTFNILTHVFCKNG 254
E M +G+ PN + L CKNG
Sbjct: 141 NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200
Query: 255 DVDK-----------------------VNGFL------------EKIEEEGFDPDLVTYN 279
D+++ +NGF EK++ G P++ TYN
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
++I C G+LN+AF L+ M R V ++VTY TL+ GLC+E +V EA +L RM
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 320
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GLSP+++SYNTLI YC G + ++ SL +M +G P T I++ G+ +
Sbjct: 321 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 380
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
++V E++ G+S S+ Y L+ AL + + A + + + G V + IY L+
Sbjct: 381 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 440
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC + +A L + + ++KP+ Y +I +C G S A+ L+ EM E+GM+P+
Sbjct: 441 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 500
Query: 520 SQICRVLINGYCMEKDVNKAEALL 543
I C ++ +AE LL
Sbjct: 501 VASYNSTIXILCKDEKWTEAEVLL 524
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 166/345 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I + F K ++ + + L+NG K+ ++YE+M GI PN +
Sbjct: 198 KNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVY 257
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C +G ++ +++ E G ++VTYNTLI C++ R+ +A L M
Sbjct: 258 TYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM 317
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P+L++Y TL++G C G + +A LF++M G SP + +YN LI + +
Sbjct: 318 KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNS 377
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ EM G+ P T I++ + + A + +++ G+ IY L
Sbjct: 378 AGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL 437
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC A+ L + + + P+ IYN ++ CK S AL L EM + +
Sbjct: 438 IHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 497
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P++++Y + I C + EA L+ +M+E G+ P I ++
Sbjct: 498 VPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 151/313 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+GL ++ + + K G P++ + N ++ ++ +++++EM G+
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 289
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L C+ V + + +++ +G P+L++YNTLI YC G L+ A L+
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 349
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P L TY L+ G + + M RGLSP V+Y L+ A +
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++++ + M G+ D + +++ G G + A L L + + IY
Sbjct: 410 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 469
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C++ + A LL+ +G++G VP++ YN + LCK + +A +L +M++
Sbjct: 470 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIE 529
Query: 479 RNIKPSLSTYRAL 491
+KPS+S + +
Sbjct: 530 LGLKPSISIWNMI 542
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 2/283 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +F+ F + + G ++V+ N L+ GL + + + ++ M R G+ PN ++
Sbjct: 270 GKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISY 329
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L +C G++DK + +++ G P L TYN LI+ + + + R M
Sbjct: 330 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 389
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P VTYT LM+ L + + +A Q++ M GL DI Y LI C G M+E
Sbjct: 390 RGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKE 449
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L + + P+ ++ GY KEG AL L+ E+ G+ + Y+ I
Sbjct: 450 ASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIX 509
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
LC+D + A LL+ + + G PS+ I+N M S + D+V
Sbjct: 510 ILCKDEKWTEAEVLLKDMIELGLKPSISIWN--MISKARFDNV 550
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 249/537 (46%), Gaps = 46/537 (8%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
LL + +++ F+W + + + Y +++ L N +F ++L ++ KD
Sbjct: 84 LLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQM----KD 139
Query: 159 CPHSVDVFQD--LISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGL 215
VF++ IS D Y K G ++ + + +V +P+ S N +L L
Sbjct: 140 ---EGIVFKESLFISIMRD----YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ NC V+ +M I P TF ++ FC ++D L + + G P+
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V Y TLI S K R+N+A L M+ +PD T+ ++ GLCK ++ EA ++ +R
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 336 MVHRGLSPD-------------------------------IVSYNTLIFAYCKEGKMQES 364
M+ RG +PD IV +NTLI + G++ ++
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 365 KSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
K++L +M+ + GI PD T ++ GY KEG + AL ++ +++ G + Y L+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ + A ++L + DG P+ +N L+ + CK + +A+ + EM + KP
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ +LI C + A+ L+ +M+ G++ ++ LIN + ++ +A L+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D +YN++ G++ K L ++ LR G AP+N++C +I+ L
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 216/478 (45%), Gaps = 14/478 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++H L+ N+ + A+++L E+ + C + F D+I K
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEM--FLMGCVPDAETFNDVI-------LGLCKF 300
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
I E+ K + L GF P ++ +L+NGL K+ +D ++ + + P F
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIF 356
Query: 244 NILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L H F +G +D L + + G PD+ TYN+LI Y K+G + A + M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++ +YT L++G CK GK+ EA+ + + M GL P+ V +N LI A+CKE ++
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ + EM G PD +T ++ G + + AL L+ ++ GV + Y+ LI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A + A L+ + G YN L++ LC+ V A L ++M+
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
PS + LI C G EAV EM+ G PD LING C + +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ DT ++N + + + G + L + GF PN+ T ++ S+
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 182/370 (49%), Gaps = 8/370 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP + ++H + + A +L ++V P V + LI + Y K
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP-DVCTYNSLI-------YGYWK 401
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
GL+ + + + G +P++ S L++G KL ID+ + V EM G+ PNT
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN L FCK + + ++ +G PD+ T+N+LIS C+ + A +L R M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V+ + VTY TL+N + G+++EA +L + MV +G D ++YN+LI C+ G++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++SL +M+ +G P +C I++ G + G + A+ E+ G + ++ LI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R ++ ++ +G P +N LM LCK V DA LL DE ++
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 483 PSLSTYRALI 492
P+ T+ L+
Sbjct: 702 PNHRTWSILL 711
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 175/339 (51%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+ G K + +V +M G PN +++ IL FCK G +D+
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ +G P+ V +N LIS++CK+ R+ +A ++R M R+ PD+ T+ +L++G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ +++ A L M+ G+ + V+YNTLI A+ + G+++E++ L+ EM+ G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G + G + A +L ++ R G + S + LI LC+ A +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P + +N L+ LC+ + D L + ++ I P T+ L+ C G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+A L+DE +E G +P+ + +L+ ++ +++
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 195/419 (46%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ K +++ + G +PS+ + + L+ L + + + EEM IG+ PN +T+
Sbjct: 214 GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
I + +D G +++++EG PD++TY LI + C G+L+ A LY M
Sbjct: 274 TICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRA 333
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD VTY TLM+ K G + + ++ M G +PD+V+Y LI A CK G +
Sbjct: 334 SSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDR 393
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M GI+P+ T ++ G K RL AL L+ ++ GV + Y I
Sbjct: 394 AFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFID 453
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ P A E + + G +PS+ N + +L + +++A + +++ + P
Sbjct: 454 YYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
TY L+ C+ G+ +A L+ EM+ G PD I LIN V+ A +
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G +YN + ++G + K +EL G PN +T ++ L K
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK 632
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 184/375 (49%), Gaps = 10/375 (2%)
Query: 166 FQDLISCTEDCNWAYVKVGLIR---------ESFKTFRK-TLDVGFQPSIVSCNFLLNGL 215
F +++ C C +V + LI+ ++ F K T ++G P++ S N L++GL
Sbjct: 747 FAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGL 806
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
L N ++ +++E+M G PN T+N+L K+ ++K+ ++ G +P+
Sbjct: 807 LGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNA 866
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+T+N +IS+ K LN A LY + + P TY L++GL K G+ +A ++F
Sbjct: 867 ITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEE 926
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P+ V YN LI + K G++ + L +M+ GI PD + I+V+ GR
Sbjct: 927 MLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGR 986
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A+ EL+ G+ Y+++I L + R A SL + G P L YN
Sbjct: 987 IDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNA 1046
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ L V A+ + +E+ ++PS+ TY ALI G +A S+ +M+ G
Sbjct: 1047 LILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Query: 516 MLPDSQICRVLINGY 530
P+++ L N Y
Sbjct: 1107 CSPNTETFAQLPNKY 1121
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 183/424 (43%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G R+ + +G +P+I + + L + ID W +++EM G P
Sbjct: 244 ALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGP 303
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ +L C G +DK K+ PD VTY TL+ + K G L +
Sbjct: 304 DVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M PD+VTYT L+ LCK G V A + M +G+ P++ +YNT+I K
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E+ LL M G+ P F+ + + YGK G A++ +++ G+ S
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ + L + R A + + + G P YN LM+ K + A L EM+
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ +P + +LI GR A + + + P +L+ G E + K
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILK 603
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L G + +T ++N++ + +++ + +++ R + P+ LT +I+
Sbjct: 604 ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIY 663
Query: 599 SLWK 602
L +
Sbjct: 664 GLIR 667
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 173/363 (47%), Gaps = 8/363 (2%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C A + I +++ F++ D G P +++ L++ L +D+ ++Y +M
Sbjct: 276 CIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASS 335
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
P+ T+ L F K GD++ V F ++E +G+ PD+VTY LI + CK G ++ AF
Sbjct: 336 HSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAF 395
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ +M + + P+L TY T++ GL K ++ EA +L M G+ P SY I Y
Sbjct: 396 DMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYY 455
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
K G ++ M GI P C + + GR+ A ++ +L + G+S
Sbjct: 456 GKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDS 515
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ L+ + + AT LL + G P + I N L+ +L K V A +
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGR 575
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSG---EAVSLMDEMLESGMLPDSQICRVLINGYCM 532
+ + + P++ TY L+ G+G+ G +A+ L M ESG P++ L++ C+
Sbjct: 576 LKNLKLAPTVVTYNILL---TGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD--CL 630
Query: 533 EKD 535
K+
Sbjct: 631 SKN 633
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 165/361 (45%), Gaps = 3/361 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + E+ K F ++V G+ P +V+ L+ L K +D+ + + + M GI P
Sbjct: 350 FGKVGDL-ETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFP 408
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N HT+N + K +D+ LE +E G P +Y I Y K G A +
Sbjct: 409 NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTF 468
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R ++P + + L + G++ EA +F+ + GLSPD V+YN L+ Y K
Sbjct: 469 ETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA 528
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ ++ LL EM+ G PD ++ K GR+ +A + L+ ++ + Y
Sbjct: 529 GQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTY 588
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ L ++ + A L + + G P+ +N L++ L K D+V AL + M
Sbjct: 589 NILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTM 648
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
N P + TY +I GR A +M + + PD LI G V
Sbjct: 649 MNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVED 707
Query: 539 A 539
A
Sbjct: 708 A 708
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 208/461 (45%), Gaps = 38/461 (8%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K G ++ TF G PSI +CN L L + I + ++ ++ + G+ P+
Sbjct: 455 YGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPD 514
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ T+N+L + K G +DK L ++ +G +PD++ N+LI++ K GR++ A+ ++
Sbjct: 515 SVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFG 574
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG------------------- 340
+ + P +VTY L+ GL KEGK+ +A +LF M G
Sbjct: 575 RLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKND 634
Query: 341 ----------------LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+PD+++YNT+I+ +EG++ + + M + PD T
Sbjct: 635 AVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYA-FWFFHQMKKFLSPDYVTLC 693
Query: 385 IIVQGYGKEGRLLSALNLVVE-LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G + GR+ A+ +V+E + + + + + L+ + + A S E +
Sbjct: 694 TLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVC 753
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRSG 502
+ + L++ LCK DA + D+ + I P+L +Y L+ G +
Sbjct: 754 NSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTE 813
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A+ L ++M +G P++ +L++ + K +NK L + + ++N +
Sbjct: 814 KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIII 873
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +L+K ++L + F+P T +I L K
Sbjct: 874 SALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKA 914
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 224/541 (41%), Gaps = 50/541 (9%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+A F +KN L++ PT Y +++ L K A+++ + E CP + F
Sbjct: 568 AAWKMFGRLKN-LKLAPTVVTYNILLTGLGKEGKILKALELFGSMTE--SGCPPNTITFN 624
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L+ C K + + K F + + P +++ N ++ GL++ ID +
Sbjct: 625 SLLDCLS-------KNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWF 677
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDV-DKVNGFLE---------------------- 264
+ +M + + P+ T L ++G V D + +E
Sbjct: 678 FHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECIL 736
Query: 265 ---KIEEEGFDPDLVTYNT----------LISSYCKKGRLNDAFYLY-RIMYRRNVLPDL 310
+IEE +++ N+ LI CK+ + DA ++ + + P L
Sbjct: 737 TEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTL 796
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
+Y LM+GL +A +LF M G P+ +YN L+ A+ K ++ + L E
Sbjct: 797 ESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSE 856
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G P+ T II+ K L AL+L EL S + Y LI L + R
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A + E + G P+ IYN L+ K + A L +MV I+P L +Y
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ C C GR EAV +E+ +G+ PD+ +ING + +++A +L +
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI--HSLWKGMERKF 608
D +YNA+ G + +++ + +G P+ T +I HSL ++ F
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAF 1096
Query: 609 Q 609
Sbjct: 1097 S 1097
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 155/340 (45%), Gaps = 8/340 (2%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+GI P ++N L + +K E ++ G P+ TYN L+ ++ K R+N
Sbjct: 790 LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINK 849
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ LY M R P+ +T+ +++ L K + +A L++ ++ SP +Y LI
Sbjct: 850 LYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLID 909
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
K G+ +++ + EM+ G P++ I++ G+GK G + A L ++ + G+
Sbjct: 910 GLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP 969
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
Y L+ LC R A E + G P YN ++ L K + +AL L
Sbjct: 970 DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLF 1029
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM +R I P L TY ALI G+ AV + +E+ G+ P LI G+ +
Sbjct: 1030 SEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLS 1089
Query: 534 KDVNKAEALLGFFAKKFQIY----DTESYNAVFNMFAEDG 569
+ ++A ++ KK + +TE++ + N + G
Sbjct: 1090 GNKDQAFSVF----KKMMVVGCSPNTETFAQLPNKYPRAG 1125
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 9/272 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + +I+ L +N + A+ + EL+ D + + LI +K
Sbjct: 863 EPNAITHNIIISALVKSNNLNKALDLYYELMS--GDFSPTPCTYGPLID-------GLLK 913
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G ++ K F + LD G P+ V N L+NG K ID +++++M + GI P+ +
Sbjct: 914 AGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKS 973
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL C G +D+ + E+++ G DPD V+YN +I+ K RL++A L+ M
Sbjct: 974 YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + PDL TY L+ L GKV A +++ + GL P + +YN LI + G
Sbjct: 1034 NRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKD 1093
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
++ S+ +MM G P+T T + Y + G
Sbjct: 1094 QAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 151/372 (40%), Gaps = 69/372 (18%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV----------------------- 326
R+ D +++ +M ++ + +L TY T+ L +G +
Sbjct: 146 RIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYN 205
Query: 327 -----------REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
EA +++ RM+ G+ P + +Y+ L+ A + G ++ +LL EM G
Sbjct: 206 GLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIG 265
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR----- 430
+ P+ +T I ++ G+ R+ A + E+ G Y LI ALC +
Sbjct: 266 LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAK 325
Query: 431 ------------PFAAT--SLLERIGQ----------------DGYVPSLEIYNELMESL 460
P T +L+++ G+ DGY P + Y L+E+L
Sbjct: 326 ELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK V A + D M + I P+L TY +IC R EA+ L++ M G+ P +
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ I+ Y D KA K+ + + NA AE G +S+ ++
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 581 FLRLGFAPNNLT 592
+ G +P+++T
Sbjct: 506 LHKCGLSPDSVT 517
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 129/321 (40%), Gaps = 61/321 (19%)
Query: 23 SFSSASSSYSLQIIQDSEHKSLS-NPLYNFLPETQN----PNKIV-DLICSSLKKG---- 72
S + ++++ ++ D+ KS N LY+ E ++ PN I ++I S+L K
Sbjct: 824 SAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLN 883
Query: 73 ---DSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNY 129
D + L+ D P P I +L +S+ A+ F + D P S Y
Sbjct: 884 KALDLYYELMSGDFSPT-PCTYGPLIDGLLKAGRSEQ--AMKIFEEML-DYGCGPNSVIY 939
Query: 130 CLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRES 189
++++ + + FA ++ ++V+ + + + L+ C G I E+
Sbjct: 940 NILINGFGKSGEIDFACELFKKMVK--EGIRPDLKSYTILVEC-------LCITGRIDEA 990
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW------------------------ 225
+ F + G P VS NF++NGL K +D+
Sbjct: 991 VQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 226 -----------QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
++YEE+ +G+ P+ T+N L +G+ D+ +K+ G P+
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 275 LVTYNTLISSYCKKGRLNDAF 295
T+ L + Y + G +++ F
Sbjct: 1111 TETFAQLPNKYPRAGLVHNPF 1131
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 2/400 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP + + N L+NG K+N ID +V + M P+T T+NI+ C G +D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ + P ++TY LI + +G +++A L M R + PD+ TY T++ G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KEG V A ++ + +G PD++SYN L+ A +GK +E + L+ +M P+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I++ ++G++ A+NL+ ++ G++ YD LI A C++ R A LE +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG +P + YN ++ +LCK AL + ++ + P+ S+Y + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNA 560
A+ ++ EM+ +G+ PD +I+ C E V++A E L+ + +F +YN
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP-SVVTYNI 513
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
V F + + + + + + G PN T +I +
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + K + L QP++++ L+ + +D+ ++ +EM G+ P+ T+
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK G VD+ + +E +G +PD+++YN L+ + +G+ + L M+
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY+ L+ LC++GK+ EA L M +GL+PD SY+ LI A+C+EG++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ +G PD ++ K G+ AL + +L G S + Y+ +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
AL A ++ + +G P YN ++ LC+ V +A L +M P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
S+ TY ++ FC R +A+++++ M+ +G P+ VLI G
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 192/392 (48%), Gaps = 9/392 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ P + Y +++ L K A+K+L +L L +C +V + LI T
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEAT------- 238
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + E+ K + L G +P + + N ++ G+ K +D+ +++ + G P+
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++NIL G ++ + K+ E DP++VTY+ LI++ C+ G++ +A L ++
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + PD +Y L+ C+EG++ A + M+ G PDIV+YNT++ CK GK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ + ++ G P++ + + G + AL++++E+ G+ Y+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC++ A LL + + PS+ YN ++ CK + DA+ + + MV
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+P+ +TY LI G EA+ L ++++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 1/380 (0%)
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ + E M R G P+ L F ++ K +E +E+ G PD+ YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK R++DA + M ++ PD VTY ++ LC GK+ A ++ ++++
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P +++Y LI A EG + E+ L+ EM+ G+ PD FT I++G KEG + A +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
V L+ G Y+ L+ AL + L+ ++ + P++ Y+ L+ +LC+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A+ L M ++ + P +Y LI FC GR A+ ++ M+ G LPD
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
++ C ++A + G + ++ SYN +F+ GD + + + +
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 583 RLGFAPNNLTCKYMIHSLWK 602
G P+ +T MI L +
Sbjct: 466 SNGIDPDEITYNSMISCLCR 485
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 1/359 (0%)
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C++G+ + LE + +G++PD++ LI + + A + I+ +
Sbjct: 97 HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ- 155
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ Y L+NG CK ++ +A ++ RM + SPD V+YN +I + C GK+ + +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +++ + P T I+++ EG + AL L+ E+ G+ Y+ +I +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A ++ + G P + YN L+ +L + L +M P++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G+ EA++L+ M E G+ PD+ LI +C E ++ A L
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+ D +YN V ++G + +E+ + +G +PN+ + M +LW ++
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P NY ++ L N K A+++ +L E+ C + + + S W+
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEV--GCSPNSSSYNTMFSAL----WSS--- 451
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + G P ++ N +++ L + +D+ +++ +M P+ T+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ FCK ++ LE + G P+ TY LI G +A L + R
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Query: 304 RNVLPD 309
+ + +
Sbjct: 572 IDAISE 577
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 258/574 (44%), Gaps = 70/574 (12%)
Query: 25 SSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLK 84
S S +L + E S P +NP KI D+IC + + T LQN ++
Sbjct: 57 GSPSEPGNLTAAEAGEKASPRTPRGKL----RNPEKIEDIICRMMAN-RAWTTRLQNSIR 111
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
L+P H + +L +S AL FF WV+ + + I+ IL +K +
Sbjct: 112 SLVPQFD-HSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNH 170
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A C L+++ K V+ +DL D +Y K G+++ES K F+K ++G + +
Sbjct: 171 AR---CILLDMPK---KGVEWDEDLFVLLID---SYGKAGIVQESVKVFQKMKELGVERT 221
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
I S + L +L+ + + M G+ P HT+NI+ F + V+ N F E
Sbjct: 222 IKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFE 281
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+++E PD+VTYNT+I+ Y + ++ +A + M RN+ P +++YTT++ G G
Sbjct: 282 EMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVG 341
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM-------GNGIY 377
+V + +LF M G+ P+ V+Y+TL+ C KM E+++++ EM+ N I+
Sbjct: 342 RVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIF 401
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
TCQ K G+L +A +++ + R + Y LI C+ A L
Sbjct: 402 MRLITCQC------KAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKL 455
Query: 438 LERIGQDGYV----PSLEI----YNELMESLCKCDSVADALLLKDEMVDRNIKPSLS--- 486
L+++ + + SLE+ YN ++E LC + A L +++ + ++ ++
Sbjct: 456 LDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNN 515
Query: 487 -------------------------------TYRALICCFCGIGRSGEAVSLMDEMLESG 515
YR LI F G +A + +D M+E+G
Sbjct: 516 LIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENG 575
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+PDS + R ++ + + A ++ +K
Sbjct: 576 HIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEK 609
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 230/515 (44%), Gaps = 28/515 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
+V+LR + + A +FN + N+ + PT C +I+ W S ++ E +
Sbjct: 230 KVILR-RGRYMMAKRYFNAMLNE-GVMPT----CHTYNIMIWGFFLSLKVETANRFFEEM 283
Query: 157 KDCPHSVDV--FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
K+ S DV + +I+ Y ++ + E+ K F + +P+++S ++ G
Sbjct: 284 KERRISPDVVTYNTMIN-------GYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKG 336
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP- 273
+ + +D +++EEM GI PN T++ L C + + ++++ E P
Sbjct: 337 YVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPK 396
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D + LI+ CK G+L+ A + + M R ++ + Y L+ CK G A +L
Sbjct: 397 DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLL 456
Query: 334 HRMVHR--------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+++ + L + YN +I C G+ ++++L ++M G+ D
Sbjct: 457 DKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNN 515
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+++G+ KEG SA ++ + R V D Y LI + + P A + L+ + ++G
Sbjct: 516 LIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENG 575
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
++P ++ +MESL + + A + + MV++ +K ++ ++ G EA+
Sbjct: 576 HIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL 635
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+D ++ +G PD L++ C + A LL F ++ SY V +
Sbjct: 636 GRIDLLMNNGCEPDFD---GLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDAL 692
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + + ++ G A + +CK +I SL
Sbjct: 693 LTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSL 727
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 175/408 (42%), Gaps = 48/408 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL---------------------- 216
YV VG + + + F + G +P+ V+ + LL GL
Sbjct: 336 GYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAP 395
Query: 217 --------------KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
K +D V + M R+ I + +L FCK+G D+
Sbjct: 396 KDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKL 455
Query: 263 LEK-IEEE-------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
L+K IE+E + + YN +I C G+ + A L+R + ++ V D + +
Sbjct: 456 LDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGV-QDPIAFN 514
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L+ G KEG A ++ M R + + +Y LI ++ K+G+ ++K+ L M+ N
Sbjct: 515 NLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIEN 574
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G PD+ + +++ ++GR+ +A ++ + GV + D+ ++ AL A
Sbjct: 575 GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
++ + +G P ++ L+ LC AL L D ++R+ S S+Y ++
Sbjct: 635 LGRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDA 691
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
G++ A S++ ++++ G D C+ LI E + +A+ L
Sbjct: 692 LLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADIL 739
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 208/469 (44%), Gaps = 76/469 (16%)
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
C LLNGL K +D+ + +EM P+ F ++ + C+ +D+ LE+
Sbjct: 12 CTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAV 68
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G +PD VTYN I CK R++DAF L + M + LP VTYT L++GL K G++
Sbjct: 69 RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 128
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA + +MV +G SP + +Y +I K G+++E++ + +M+GNG PD F ++
Sbjct: 129 EAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188
Query: 388 QGYGKEGRLLSAL----------------------NLVVE-----------LQRF----- 409
G K G+L AL NLV+ L F
Sbjct: 189 SGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD 248
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+ ++ ++ L+ ALC+ R A + ++++ + P+L Y L++ K + +A
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
LL E V+R P TY ++I C +GR E EM G PD+ LI+G
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368
Query: 530 YCMEKDVNK---------------------------------AEALLGFFAKKFQ--IYD 554
+ K + K AEA F A + + +
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+Y+A+ + F +G++S +EL +R L G PN ++ +I L +
Sbjct: 429 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 477
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 217/482 (45%), Gaps = 15/482 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT+ Y +V L + AM +L ++VE K ++ + +I K
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVE--KGNSPTLKTYTVVID-------GLSKA 159
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW----QVYEEMGRIGICPN 239
G + E+ + F L G +P L++GL K+ +D+ Q+ E G+ P+
Sbjct: 160 GRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
N++ C +G+++ + +++++ D T+N L+++ CK R +A +
Sbjct: 220 VVIHNLVIRQLCASGNLEDALAYFDELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVK 278
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R P L TYT+L++G K G++ EA V RG PD V+Y ++I CK G
Sbjct: 279 KMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLG 338
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++E +EM G PD T ++ G+ K + A + ++ + G +S Y+
Sbjct: 339 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 398
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC+ R A + + + G V ++ Y+ LM+ C +V+ A+ L M+DR
Sbjct: 399 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 458
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD-VNK 538
+P+L +Y +I C G+ +A +++L+ + PD ++G C D V
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGD 518
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
L + + SY+ + + G L +E+ + G AP+ + +I
Sbjct: 519 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578
Query: 599 SL 600
L
Sbjct: 579 WL 580
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 219/487 (44%), Gaps = 22/487 (4%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHE--ISRVLLRCQSDSVSAL 110
P+ N +D +C + + D+ L + D K LP + + +L + D A+
Sbjct: 74 PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAI 133
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
K + PT Y +++ L+ + A ++ ++ L C V+ LI
Sbjct: 134 LEQMVEKGN---SPTLKTYTVVIDGLSKAGRVEEARRIFVDM--LGNGCRPDAFVYTALI 188
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLD----VGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
S K+G + E+ + ++ G +P +V N ++ L ++
Sbjct: 189 S-------GLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALA 241
Query: 227 VYEEMGRIGICPNTH-TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++E+ TH TFN L CK ++ F++K+ E P L TY +L+ +
Sbjct: 242 YFDELD--DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGF 299
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K GRL++A + R +PD VTYT++++GLCK G+V E + FH M +RG PD
Sbjct: 300 LKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V+Y LI + K + ++ + +M+ +G T T II+ G K GR+ A +
Sbjct: 360 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 419
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
++ G + Y L+ C + AA L R+ G P+L YN ++ LC+
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCG-IGRSGEAVSLMDEMLESGMLPDSQICR 524
+A A ++++ R + P + T+ + + C + G+ V L + M+ G P+
Sbjct: 480 LAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYS 539
Query: 525 VLINGYC 531
+L++G C
Sbjct: 540 ILMDGIC 546
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 154/322 (47%), Gaps = 8/322 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ + L++G LKL +D+ +E G P+ T+ + CK G V++
Sbjct: 287 PTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 346
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ G++PD VTY LI + K + A +YR M + + VTY +++GLCK
Sbjct: 347 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 406
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+V EA+ F M RG +V+Y+ L+ +C EG + + L M+ G P+ +
Sbjct: 407 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 466
Query: 383 CQIIVQGYGKEGRLLSALNLVVEL-QRFGVSISRDIYDY--LIVALCQDNRPFA-ATSLL 438
II++G + G+L A +L QR + D+Y + + LCQ L
Sbjct: 467 YNIIIRGLCRAGKLAKAYFYFEKLLQR---RLCPDVYTFNSFLHGLCQRLDTVGDGVELF 523
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + G P+L Y+ LM+ +C+ + L + EMV R + P + + LI C
Sbjct: 524 ESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIA 583
Query: 499 GRSGEAVSLMDEMLESGMLPDS 520
GR EA+ + E LE PD+
Sbjct: 584 GRVDEALEVFRE-LERRSAPDA 604
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 160/341 (46%), Gaps = 2/341 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K+G + E+ ++ ++ GF P V+ +++GL KL +++ + + EM G P
Sbjct: 298 GFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEP 357
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L F K + K + ++ + G VTYN ++ CK GR+ +A+ +
Sbjct: 358 DAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATF 417
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + +VTY+ LM+G C EG V A +LF RM+ RG P++VSYN +I C+
Sbjct: 418 LAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 477
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE-GRLLSALNLVVELQRFGVSISRDI 417
GK+ ++ +++ + PD +T + G + + + L + G S +
Sbjct: 478 GKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHS 537
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y L+ +C+ + + G P + ++N L+ LC V +AL + E+
Sbjct: 538 YSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL- 596
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+R P +Y +L+ R EA L M G P
Sbjct: 597 ERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
L D T L+NGLCK G++ A L M SPD+V++ +I C+E ++ E+ S
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFS 62
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+L + G PD T + + G K R+ A L+ ++ + Y L+ L
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A ++LE++ + G P+L+ Y +++ L K V +A + +M+ +P
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLES----GMLPDSQICRVLINGYCMEKDVNKAEA 541
Y ALI IG+ EA+ +++M+E+ G+ PD I ++I C ++ A A
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALA 241
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 11/401 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN-------- 177
+YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 15 SYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSGLI 73
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE G
Sbjct: 74 TAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYP 133
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + FNIL H F K G++ + I + P +V++NTL++ Y K G L++ F L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI +CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ + + M+ + PD T ++ G K+G L A +L+ E+ G+ +
Sbjct: 254 NGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C++ A +R+ ++ Y L+ LC+ DA + EM+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+KP + TY +I FC G L+ EM G +P
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 152/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + ++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ PD LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 126/308 (40%), Gaps = 20/308 (6%)
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNT 350
+L +Y T+++ LC + EA L +V R DI ++
Sbjct: 12 NLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSG 71
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI AY + G ++++ Y + + F TC+ +++ K E
Sbjct: 72 LITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLEC 130
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 251 HCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 590 NLTCKYMI 597
+T +I
Sbjct: 311 KITYTTLI 318
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCK 288
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 2/400 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP + + N L+NG K+N ID +V + M P+T T+NI+ C G +D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ + P ++TY LI + +G +++A L M R + PD+ TY T++ G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KEG V A ++ + +G PD++SYN L+ A +GK +E + L+ +M P+
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I++ ++G++ A+NL+ ++ G++ YD LI A C++ R A LE +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG +P + YN ++ +LCK AL + ++ + P+ S+Y + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNA 560
A+ ++ EM+ +G+ PD +I+ C E V++A E L+ + +F +YN
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP-SVVTYNI 513
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
V F + + + + + + G PN T +I +
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + K + L QP++++ L+ + +D+ ++ +EM G+ P+ T+
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK G VD+ + +E +G +PD+++YN L+ + +G+ + L M+
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY+ L+ LC++GK+ EA L M +GL+PD SY+ LI A+C+EG++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ +G PD ++ K G+ AL + +L G S + Y+ +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
AL A ++ + +G P YN ++ LC+ V +A L +M P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
S+ TY ++ FC R +A+++++ M+ +G P+ VLI G
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 192/392 (48%), Gaps = 9/392 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ P + Y +++ L K A+K+L +L L +C +V + LI T
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEAT------- 238
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + E+ K + L G +P + + N ++ G+ K +D+ +++ + G P+
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDV 298
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++NIL G ++ + K+ E DP++VTY+ LI++ C+ G++ +A L ++
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + PD +Y L+ C+EG++ A + M+ G PDIV+YNT++ CK GK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ + ++ G P++ + + G + AL++++E+ G+ Y+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC++ A LL + + PS+ YN ++ CK + DA+ + + MV
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+P+ +TY LI G EA+ L ++++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 1/380 (0%)
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ + E M R G P+ L F ++ K +E +E+ G PD+ YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK R++DA + M ++ PD VTY ++ LC GK+ A ++ ++++
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P +++Y LI A EG + E+ L+ EM+ G+ PD FT I++G KEG + A +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
V L+ G Y+ L+ AL + L+ ++ + P++ Y+ L+ +LC+
Sbjct: 286 VRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A+ L M ++ + P +Y LI FC GR A+ ++ M+ G LPD
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
++ C ++A + G + ++ SYN +F+ GD + + + +
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 583 RLGFAPNNLTCKYMIHSLWK 602
G P+ +T MI L +
Sbjct: 466 SNGIDPDEITYNSMISCLCR 485
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 1/359 (0%)
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C++G+ + LE + +G++PD++ LI + + A + I+ +
Sbjct: 97 HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ- 155
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ Y L+NG CK ++ +A ++ RM + SPD V+YN +I + C GK+ + +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +++ + P T I+++ EG + AL L+ E+ G+ Y+ +I +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A ++ + G P + YN L+ +L + L +M P++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G+ EA++L+ M E G+ PD+ LI +C E ++ A L
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+ D +YN V ++G + +E+ + +G +PN+ + M +LW ++
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P NY ++ L N K A+++ +L E+ C + + + S W+
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEV--GCSPNSSSYNTMFSAL----WSS--- 451
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + G P ++ N +++ L + +D+ +++ +M P+ T+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ FCK ++ LE + G P+ TY LI G +A L + R
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Query: 304 RNVLPD 309
+ + +
Sbjct: 572 IDAISE 577
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 215/478 (44%), Gaps = 15/478 (3%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNY---CLIVHILAWNNKFSFAMKMLCE 151
+ RVL + VS L FF WV + +N+ CL+ ++ E
Sbjct: 37 VGRVLQVIKDVDVS-LFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDE 95
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
L L + C + + LI + K G + +F+ + + G P +V+ + +
Sbjct: 96 L--LGQHCDTNHITYNTLIG-------GFCKAGDMERAFQLLAEMKERGHSPDVVTHSSI 146
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+ L + + Q + E + P++ FNIL H CK + + +E++ E G
Sbjct: 147 VQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGI 204
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PD+VTYN+LI CK R+ +A L M +R V P+LVTY TL+ G CK G AHQ
Sbjct: 205 VPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQ 264
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L RM+ G PD+V++N+LI +C++ K+ ++ +L+ M P+ T +++ G
Sbjct: 265 LIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLC 324
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
GR A L+ E+ G+ Y+ LI C++ + A + + + G +P
Sbjct: 325 DAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGI 384
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y L +L K + +A L D M D P+L T+ +L+ C R EA L+ M
Sbjct: 385 SYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVM 444
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
G P + VL+ G C V+ A+ +L + S + + A +G
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREG 502
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 197/408 (48%), Gaps = 18/408 (4%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKD 158
C + ++S A+ +F + +E P S + ++VH L N+ S A +M+ E+ E +V D
Sbjct: 151 CNTGNLSRAMQYF---RESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPD 207
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
V + LI K + E+ + + +P++V+ N L+ G K
Sbjct: 208 ----VVTYNSLID-------GLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKT 256
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
C Q+ E M + G P+ TFN L FC+ +DK L +++ P+LVTY
Sbjct: 257 GCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTY 316
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N LIS C GR N+A L M R +LPD++TY +L+ C+ ++ +A Q+ + MV
Sbjct: 317 NVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVE 376
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ PD +SY TL A K + E+ +LL M G P+ FT +++G RL
Sbjct: 377 RGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDE 436
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +L+ ++R G + Y+ L+ LC+ R A +L + +G P + ++
Sbjct: 437 ARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVH 496
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+L + AL D++V K +Y+ L+ F + R G++ S
Sbjct: 497 TLAREGKQDLALHYFDQVVAAESKACDPSYQKLL-EFVKVLREGKSNS 543
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 155/343 (45%), Gaps = 6/343 (1%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
F +++ + D + +TYNTLI +CK G + AF L M R PD+VT+++++ LC
Sbjct: 92 FRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALC 151
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
G + A Q F V +PD V +N L+ CK ++ E++ ++ EM GI PD
Sbjct: 152 NTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVV 209
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ G K R+ A L+ + + V + Y+ LI C+ A L+ER+
Sbjct: 210 TYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERM 269
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
Q G P + +N L+ C+ + A + M P+L TY LI C GR+
Sbjct: 270 IQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRA 329
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EA L+ EM G+LPD LI +C + +A + ++ I D SY +
Sbjct: 330 NEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTL 389
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ + L G PN T +SL +G+
Sbjct: 390 AVALLKSERFDEAFALLDNMFDAGAIPNLFT----FNSLMEGL 428
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 195/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ L P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 150/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L P +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 141/353 (39%), Gaps = 36/353 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G + F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 39 VVSRKGKGSASSVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFR 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + + G + +N L+ ++ KEG+++ ++S+
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ + P + ++ GY K G L L +Q GV
Sbjct: 159 FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQ--------------- 203
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
P + Y+ L+ LCK + DA L DEM+D + P+ T
Sbjct: 204 --------------------PDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVT 243
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+ LI C GR A+ + +ML + PD LI G C + D+ +A+ L+ +
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +Y + + ++GDL + +KR ++ +++ +I L
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGL 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 124/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++ ++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L +P+ +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 227/530 (42%), Gaps = 58/530 (10%)
Query: 88 PHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK 147
PHL RVL + AL FF WV + K + +C I+ IL N+ A
Sbjct: 85 PHL----FIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYW 140
Query: 148 MLCELVE---------LVKDCPHSVDVFQDLISC-----TEDCNWAYVKV----GLIRES 189
++ +V L+ + VF +I ++CN ++V L+ ++
Sbjct: 141 VMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCN-RILRVLRDENLLSKA 199
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+ G +P++V+ N +L+ K +DQ ++ EM G PN T+N+L +
Sbjct: 200 KNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNG 259
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
K G++++ G +E++ G + TYN LI+ +C+KG +AF L M R P
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPT 319
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
L TY TLM GLCK +V F M+ +PDIVS+N+L++ YC+ G + E+ L
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
E+ + P T ++ G G L +AL L E+
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT---------------------- 417
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
G P + Y L+ K V+ A +EM+ + +KP Y
Sbjct: 418 -------------DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
I I + A S+ +EML +G PD V ++ C + + +A LL
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
I D +Y ++ N F ++G L K E+ L G AP+ +T +IH+
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 162/345 (46%), Gaps = 5/345 (1%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C W V+V +R F K+ F P IVS N LL G + CI + + +++E+
Sbjct: 331 CKW--VQVTGVRLRFSDMLKS---KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P T+N L H C G +D +++ ++G PD+ TY L++ K G ++ A
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M + + PD Y T + G K A + M+ G PD+++YN + A
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C++G +E+ LL M+ +G+ PD T I+ G+ K G L A + E+ GV+ S
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI A A ++ + ++ YN ++ LC + +A DE
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
M ++ I P+ +Y LI C +G EA+ L EML+ + PDS
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 163/353 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + GL E+F + ++ P++ + N L+ GL K + + +M + P
Sbjct: 294 GFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTP 353
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +FN L + +C+ G + + ++++ P ++TYNTLI C G L+ A L
Sbjct: 354 DIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLK 413
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + PD+ TYT L+NG K G V A F+ M+ +GL PD +YNT I K
Sbjct: 414 KEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKI 473
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ S+ EM+ G PD T + V ++G A +L+ + G+ Y
Sbjct: 474 ADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY 533
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I ++ A + + G PS+ Y L+ + + A + +M++
Sbjct: 534 TSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLE 593
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+++ ++ TY A+I C R EA DEM E G+LP+ +LIN C
Sbjct: 594 KSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y + G I E+F F + P++++ N L++GL +D ++ +EM G+
Sbjct: 363 YGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+ IL + K G V GF ++ +G PD YNT I K + AF +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD++TY ++ LC++G EA L MV GL PD V+Y ++I + K
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G +++++ + EM+ G+ P T +++ + + L A ++ V +
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ +I LC R A + + + G +P+ Y L+ C +AL L EM+
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662
Query: 478 DRNIKPSLSTYRALI 492
DR I+P T+ +
Sbjct: 663 DRKIQPDSFTHSVFL 677
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 44/308 (14%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ PT Y ++H L A+++ E+ + +F D+ + T N +
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ--------GLFPDIFTYTILVNGCF 436
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+G + + F + L G +P + N + G +K+ + + EEM G P+
Sbjct: 437 -KLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+ H C+ G+ ++ LE + +G PD VTY ++I+ + K G L A ++
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555
Query: 301 MYRRNVLPDLVTYTTL-----------------------------------MNGLCKEGK 325
M + V P +VTYT L +NGLC +
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA++ F M +G+ P+ SY LI C G +E+ L EM+ I PD+FT +
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 386 IVQGYGKE 393
++ ++
Sbjct: 676 FLKNLHRD 683
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE-LVKDCPHSVDVFQDLISCTEDCNWAYVK 182
P Y + VH L F A C+L+E +V D + D ++ T N +VK
Sbjct: 493 PDVITYNVFVHALCQQGNFEEA----CDLLENMVSD-----GLIPDHVTYTSIIN-GFVK 542
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +R++ + F + L G PS+V+ L++ +D + + +M + N T
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + + C +D+ + +++EE+G P+ +Y LI+ C G +A LYR M
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKV 326
R + PD T++ + L ++ +V
Sbjct: 663 DRKIQPDSFTHSVFLKNLHRDYQV 686
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE-SYNAVFNMF 565
+ D+M+ +G+LPD + C ++ E ++KA+ + G ++F I T +YN + + +
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMM-EQFGIKPTVVTYNTMLDSY 225
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++G + + +EL G PN++T +++ L K E
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/530 (26%), Positives = 227/530 (42%), Gaps = 58/530 (10%)
Query: 88 PHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK 147
PHL RVL + AL FF WV + K + +C I+ IL N+ A
Sbjct: 85 PHL----FIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYW 140
Query: 148 MLCELVE---------LVKDCPHSVDVFQDLISC-----TEDCNWAYVKV----GLIRES 189
++ +V L+ + VF +I ++CN ++V L+ ++
Sbjct: 141 VMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCN-RILRVLRDENLLSKA 199
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+ G +P++V+ N +L+ K +DQ ++ EM G PN T+N+L +
Sbjct: 200 KNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNG 259
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
K G++++ G +E++ G + TYN LI+ +C+KG +AF L M R P
Sbjct: 260 LSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPT 319
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
L TY TLM GLCK +V F M+ +PDIVS+N+L++ YC+ G + E+ L
Sbjct: 320 LSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFD 379
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
E+ + P T ++ G G L +AL L E+
Sbjct: 380 ELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT---------------------- 417
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
G P + Y L+ K V+ A +EM+ + +KP Y
Sbjct: 418 -------------DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
I I + A S+ +EML +G PD V ++ C + + +A LL
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
I D +Y ++ N F ++G L K E+ L G AP+ +T +IH+
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 162/345 (46%), Gaps = 5/345 (1%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C W V+V +R F K+ F P IVS N LL G + CI + + +++E+
Sbjct: 331 CKW--VQVTGVRLRFSDMLKS---KFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P T+N L H C G +D +++ ++G PD+ TY L++ K G ++ A
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M + + PD Y T + G K A + M+ G PD+++YN + A
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C++G +E+ LL M+ +G+ PD T I+ G+ K G L A + E+ GV+ S
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI A A ++ + ++ YN ++ LC + +A DE
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
M ++ I P+ +Y LI C +G EA+ L EML+ + PDS
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 163/353 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + GL E+F + ++ P++ + N L+ GL K + + +M + P
Sbjct: 294 GFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTP 353
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +FN L + +C+ G + + ++++ P ++TYNTLI C G L+ A L
Sbjct: 354 DIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLK 413
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + PD+ TYT L+NG K G V A F+ M+ +GL PD +YNT I K
Sbjct: 414 KEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKI 473
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ S+ EM+ G PD T + V ++G A +L+ + G+ Y
Sbjct: 474 ADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY 533
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I ++ A + + G PS+ Y L+ + + A + +M++
Sbjct: 534 TSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLE 593
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+++ ++ TY A+I C R EA DEM E G+LP+ +LIN C
Sbjct: 594 KSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 147/315 (46%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ Y + G I E+F F + P++++ N L++GL +D ++ +EM G+
Sbjct: 363 YGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+ IL + K G V GF ++ +G PD YNT I K + AF +
Sbjct: 423 PDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSM 482
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M PD++TY ++ LC++G EA L MV GL PD V+Y ++I + K
Sbjct: 483 QEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVK 542
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G +++++ + EM+ G+ P T +++ + + L A ++ V +
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ +I LC R A + + + G +P+ Y L+ C +AL L EM+
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662
Query: 478 DRNIKPSLSTYRALI 492
DR I+P T+ +
Sbjct: 663 DRKIQPDSFTHSVFL 677
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 134/308 (43%), Gaps = 44/308 (14%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ PT Y ++H L A+++ E+ + +F D+ + T N +
Sbjct: 385 DLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ--------GLFPDIFTYTILVNGCF 436
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+G + + F + L G +P + N + G +K+ + + EEM G P+
Sbjct: 437 -KLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDV 495
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+ H C+ G+ ++ LE + +G PD VTY ++I+ + K G L A ++
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555
Query: 301 MYRRNVLPDLVTYTTL-----------------------------------MNGLCKEGK 325
M + V P +VTYT L +NGLC +
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA++ F M +G+ P+ SY LI C G +E+ L EM+ I PD+FT +
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675
Query: 386 IVQGYGKE 393
++ ++
Sbjct: 676 FLKNLHRD 683
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVE-LVKDCPHSVDVFQDLISCTEDCNWAYVK 182
P Y + VH L F A C+L+E +V D + D ++ T N +VK
Sbjct: 493 PDVITYNVFVHALCQQGNFEEA----CDLLENMVSD-----GLIPDHVTYTSIIN-GFVK 542
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +R++ + F + L G PS+V+ L++ +D + + +M + N T
Sbjct: 543 NGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVIT 602
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + + C +D+ + +++EE+G P+ +Y LI+ C G +A LYR M
Sbjct: 603 YNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREML 662
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAH 330
R + PD T++ + L ++ +V
Sbjct: 663 DRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE-SYNAVFNMF 565
+ D+M+ +G+LPD + C ++ E ++KA+ + G ++F I T +YN + + +
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMM-EQFGIKPTVVTYNTMLDSY 225
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++G + + +EL G PN++T +++ L K E
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 187/376 (49%), Gaps = 3/376 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + L+ + F K +G P++++ + +++GL K + Q +++ EEM + G P
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKP 347
Query: 239 NTHTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +T L H CK G ++ FL+ I + + P++ TY +IS YCK+ +L+ A L
Sbjct: 348 NVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEML 407
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M + ++P+ TYTTL++G CK G +A++L M + G P+ +YN+++ CK
Sbjct: 408 FERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCK 467
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ +E+ LL N I D T I++ K + AL + ++ + G +
Sbjct: 468 RGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHL 527
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI A C+ N + L + + + G P+ E Y ++ C+ V+ A+ +M
Sbjct: 528 YTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMS 587
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV-LINGYCMEKDV 536
D P +Y ALI C R EA L D M++ G+ P ++ RV L YC +D
Sbjct: 588 DHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP-CEVTRVTLTYEYCKTEDF 646
Query: 537 NKAEALLGFFAKKFQI 552
A +L KK I
Sbjct: 647 ASAMVILERLNKKLWI 662
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/600 (23%), Positives = 280/600 (46%), Gaps = 40/600 (6%)
Query: 14 NFISKL-AFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPET--QNP-NKIVDLICSSL 69
F+ KL +F SSAS+S L + S+S+P ++F + Q+P KI L+ +
Sbjct: 37 GFLQKLCSFQQGSSASAS--LAFFSSTHFDSISSPHHDFSSSSSLQSPLKKICSLVLDTY 94
Query: 70 KKGDSHLTLLQNDLKPLLPHLG-AHE--ISRV-LLRCQSDSVSALTFFNWVKNDLEIKPT 125
+ HL + L + HE IS V LL + S+ AL+FF W
Sbjct: 95 LR-QPHLRFSPSKLNLDMDAASLTHEQAISAVALLASEEGSMVALSFFYWA--------- 144
Query: 126 SSNYCLIVHILAWNNKFSFAMKM--LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
KF + M++ +C + LV C +++ +++ C + ++
Sbjct: 145 -----------VGFPKFRYFMRLYIVCTM-SLVGKC--NLERAHEVVECMVG---VFAEI 187
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + G + N ++ ++ ++ V++EM G+ P++ T+
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ +C+NG+V + + ++ ++ E GF D T +I+++C+K +N A + + + +
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P+L+ Y+++++GLCK G V++A +L MV G P++ ++ +LI CK+G +
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTER 367
Query: 364 SKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L +++ + Y P+ T ++ GY KE +L A L ++ G+ + + Y LI
Sbjct: 368 AFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLI 427
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ A L+E + +G+ P+ YN +++ LCK +A L + I+
Sbjct: 428 DGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIE 487
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY LI C +A+ +++M + G PD + LI +C + + +E L
Sbjct: 488 ADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKL 547
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K E+Y ++ + + +S ++ ++ G AP++++ +I L K
Sbjct: 548 FDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCK 607
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 5/355 (1%)
Query: 182 KVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G +F+ F K + ++P++ + +++G K + + ++E M G+ PNT
Sbjct: 361 KKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNT 420
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L CK G+ K +E + EGF P+ TYN+++ CK+GR +AF L
Sbjct: 421 NTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNT 480
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
++ + D VTYT L++ CK + +A ++M G PDI Y TLI A+C++
Sbjct: 481 GFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM 540
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M++S+ L E++ G+ P T ++ GY +E ++ A+ ++ G + Y
Sbjct: 541 MKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGA 600
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+++R A L + + G P L CK + A A+++ + + N
Sbjct: 601 LISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL---N 657
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
K + T LI C + A ++L+ + D ++ N C+E +
Sbjct: 658 KKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVD-RVTLAAFNTACIESN 711
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 197/414 (47%), Gaps = 4/414 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I E+ + FR+ QP + + L+ GL ++ + ++M +G P
Sbjct: 208 GFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRP 263
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T + L ++C+ ++ L ++ + G P +VT ++++YC++GR++ A ++
Sbjct: 264 TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVF 323
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P++ TY ++ G C GKV +A L +M G+ PD+V+YN LI C +
Sbjct: 324 ESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + LL M GNG+ D +T +++ K G++ A +L L+ G+ + +
Sbjct: 384 GHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LC+ + A + LE + GY P Y+ +E+LCK + L DEM+
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KPS Y +I G A + +M+ G PD + YC E +++
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE ++ K I D +YN + + G + + + K + PN+ T
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFT 617
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 165/357 (46%), Gaps = 4/357 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ + N L+ L + + + M R G P+ TFN L +C+ ++ +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ GF D V+Y LI +C+ GR+++A L+R M + PD+ T+ L+ GLC
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ E + +M G P +Y L+ +C+E K +E++ +L EM +G+ P T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C I+V Y +EGR+ A+ + ++ G + Y+ ++ C + + A +LL+++
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + YN L+ C + A L M + TY LI C G+
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
EA SL D + G+ P+S +ING C + A L DT +Y+
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYS 479
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 159/331 (48%), Gaps = 4/331 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P TYN LI + C++ L A +M R PD T+ +L+ G C+ ++ AH L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F +M RG S D VSY LI +C+ G++ E+ L EM PD +T +V+G
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCD 242
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
GR L ++ +++ G + Y L+ C++ + A +L + G +P +
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
++ + C+ ++ A+ + + M + +P++ TY A++ FC G+ +A++L+D+M
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
E G+ PD +LI G C++ + A LL D +YN + + + G +
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ L G PN++T +I+ L K
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKA 453
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 24/406 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F+ R G + N L++ L K +D+ +++ + GI PN+ TF
Sbjct: 384 GHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CK G D FLE + G+ PD TY+ I + CK + + M +
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++V P V YT ++N L E A +++ +MV +G SPD+V+Y T + AYC EG++ E
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+++++ EM D ++ G+ G+ A+ ++ + GV+ + + + I+
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMT--GVASMPNHFTFFIL 621
Query: 424 ALC------QDNRPFAATS------------LLERIGQDGYVPSLEIYNELMESLCKCDS 465
++ P ATS L E + ++ S Y ++E +
Sbjct: 622 LRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERR 681
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ + L M + N+ + Y AL+ CFC + +A +L+ M+ G LP+ +
Sbjct: 682 LDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQY 741
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTES--YNAVFNMFAEDG 569
L++G E ++A+ + F + +++ Y+T+ + + + F G
Sbjct: 742 LLSGLTAEGQADRAKEI--FRSSRWKEYNTDEIVWKVIIDGFIRKG 785
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
H H +P +YN LI A C+ ++ ++ L M+ +G PD FT ++ GY +
Sbjct: 118 HMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRT 177
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
+L A +L ++ G S Y LI C+ R A L + Q P + +
Sbjct: 178 QQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTH 233
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L++ LC + L + +M + +P+ Y AL+ +C ++ EA +++EM +
Sbjct: 234 AALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFD 293
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
SG++P C +++N YC E ++ A + K + +YNA+ F G + K
Sbjct: 294 SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYK 353
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHS 599
M L + G P+ +T +I
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRG 379
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 30/341 (8%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++KP++ NY ++++ L + A ++ ++V + C S DV S CN
Sbjct: 505 DVKPSTVNYTIVINRLFNERNYGLATRIWGQMVS--QGC--SPDVVTYTTSVRAYCNEGR 560
Query: 181 V-KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + + K R +D ++ N L++G + D+ + + M + PN
Sbjct: 561 LDEAENVVTEMKKCRTIVDA------MAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TF IL + + V P T S K L D F L+
Sbjct: 615 HFTFFILLRHLLQRRLAEHV-------------PLKAT------SVWKTIELADVFELFE 655
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + +V TY +++ G +E ++ E L M L + YN L+ +CK
Sbjct: 656 LMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLR 715
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ +LL M+G+G P+ Q ++ G EG+ A + + + ++
Sbjct: 716 MYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWK 775
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+I + ++ + Q PS E Y L E L
Sbjct: 776 VIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 230/507 (45%), Gaps = 12/507 (2%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
+LR Q+D AL FF W Y ++ +L+ A ++L +
Sbjct: 172 AVLRSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGI 231
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
+CP + F ++ +Y + G +R + + G +PS+ CN + L+K
Sbjct: 232 ECPP--EAFGYVMV-------SYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVK 282
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+++ + E M GI P+ T+N L +C ++ + + +G PD V+
Sbjct: 283 GGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVS 342
Query: 278 YNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
Y T++ CK+ ++ + L ++++ N++PD VTY TL++ L K G +A
Sbjct: 343 YYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 402
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+G D V Y+ ++ ++C++G+M E+KSL+ +M G PD T IV G+ + GR+
Sbjct: 403 QDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRI 462
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A ++ ++ + G + Y L+ LC + A ++ + + P+ Y +
Sbjct: 463 DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAV 522
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
M L + +++A L EMV++ P+ LI C + EA ++E L G
Sbjct: 523 MHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGC 582
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+ +I+G+C D+ A ++L + D +Y A+F+ + G L + E
Sbjct: 583 AINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAE 642
Query: 577 LQKRFLRLGFAPNNLTCKYMIH--SLW 601
L + L G P +T + +IH S W
Sbjct: 643 LIVKMLSKGLDPTPVTYRSVIHRYSQW 669
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 186/392 (47%), Gaps = 2/392 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P V+ N L++ L K D +E G + ++ + H FC+ G +D+
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ + G +PD+VTY ++ +C+ GR+++A + + MY+ P+ V+YT L+NGLC
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH 493
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK EA ++ + +P+ ++Y ++ +EGK+ E+ L EM+ G +P
Sbjct: 494 SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVE 553
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++Q + +++ A + E G +I+ + +I CQ AA S+L+ +
Sbjct: 554 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMY 613
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P Y L ++L K + +A L +M+ + + P+ TYR++I + GR
Sbjct: 614 LSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVD 673
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+ ++L+++ML+ P + +I C ++ +AE LLG + D + + +
Sbjct: 674 DMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLM 731
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+ + G ++ R R P+ C+
Sbjct: 732 ESYLKKGVAISAYKVACRMFRRNLTPDLKLCE 763
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 170/341 (49%), Gaps = 7/341 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ +++G +L ID+ ++ ++M + G PNT ++ L + C +G +
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ EE + P+ +TY ++ ++G+L++A L R M + P V L+
Sbjct: 501 REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ KV EA + +++G + ++V++ T+I +C+ G M+ + S+L +M +G +PD
Sbjct: 561 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T + GK+GRL A L+V++ G+ + Y +I Q R +LLE
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE 680
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ + P +YN+++E LC ++ +A L +++ K +T L+ + G
Sbjct: 681 KMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKG 738
Query: 500 RSGEAVSLMDEMLESGMLPDSQIC-----RVLINGYCMEKD 535
+ A + M + PD ++C +++++G +E D
Sbjct: 739 VAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEAD 779
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 2/262 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ R+ ++ GF P+ V N L+ L + + + + EE G N F
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 589
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ H FC+ GD++ L+ + G PD VTY L + KKGRL++A L M
Sbjct: 590 TTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 649
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P VTY ++++ + G+V + L +M+ R P YN +I C G ++E
Sbjct: 650 KGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEE 707
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ LL +++ D TC ++++ Y K+G +SA + + R ++ + + +
Sbjct: 708 AEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSK 767
Query: 424 ALCQDNRPFAATSLLERIGQDG 445
L D + A +L+ R + G
Sbjct: 768 KLVLDGKLVEADNLMLRFVERG 789
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 2/163 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + E+ + K L G P+ V+ +++ + +D + E+M + P
Sbjct: 630 ALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKM--LKRQP 687
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+N + C G++++ L K+ D T + L+ SY KKG A+ +
Sbjct: 688 FRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVA 747
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
M+RRN+ PDL + L +GK+ EA L R V RG+
Sbjct: 748 CRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 258/574 (44%), Gaps = 70/574 (12%)
Query: 25 SSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLK 84
S S +L + E S P +NP KI D+IC + + T LQN ++
Sbjct: 57 GSPSEPGNLTAAEAGEKASPRTPRGKL----RNPEKIEDIICRMMAN-RAWTTRLQNSIR 111
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
L+P H + +L +S AL FF WV+ + + I+ IL +K +
Sbjct: 112 SLVPQFD-HSLVWNVLHGSRNSDHALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNH 170
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A C L+++ K V+ +DL D +Y K G+++ES K F+K ++G + +
Sbjct: 171 AR---CILLDMPK---KGVEWDEDLFVLLID---SYGKAGIVQESVKVFQKMKELGVERT 221
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
I S + L +L+ + + M G+ P HT+NI+ F + V+ N F E
Sbjct: 222 IKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETANRFFE 281
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+++E PD+VTYNT+I+ Y + ++ +A + M RN+ P +++YTT++ G G
Sbjct: 282 EMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGYVSVG 341
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM-------GNGIY 377
+V + +LF M G+ P+ V+Y+TL+ C KM E+++++ EM+ N I+
Sbjct: 342 RVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPKDNSIF 401
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
TCQ K G+L +A +++ + R + Y LI C+ A L
Sbjct: 402 MRLITCQC------KAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKL 455
Query: 438 LERIGQDGYV----PSLEI----YNELMESLCKCDSVADALLLKDEMVDRNIKPSLS--- 486
L+++ + + SLE+ YN ++E LC + A L +++ + ++ ++
Sbjct: 456 LDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQDPIAFNN 515
Query: 487 -------------------------------TYRALICCFCGIGRSGEAVSLMDEMLESG 515
YR LI F G +A + +D M+E+G
Sbjct: 516 LIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENG 575
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+PDS + R ++ + + A ++ +K
Sbjct: 576 HIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEK 609
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/515 (22%), Positives = 230/515 (44%), Gaps = 28/515 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
+V+LR + + A +FN + N+ + PT C +I+ W S ++ E +
Sbjct: 230 KVILR-RGRYMMAKRYFNAMLNE-GVMPT----CHTYNIMIWGFFLSLKVETANRFFEEM 283
Query: 157 KDCPHSVDV--FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
K+ S DV + +I+ Y ++ + E+ K F + +P+++S ++ G
Sbjct: 284 KERRISPDVVTYNTMIN-------GYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKG 336
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP- 273
+ + +D +++EEM GI PN T++ L C + + ++++ E P
Sbjct: 337 YVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPK 396
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D + LI+ CK G+L+ A + + M R ++ + Y L+ CK G A +L
Sbjct: 397 DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLL 456
Query: 334 HRMVHR--------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+++ + L + YN +I C G+ ++++L ++M G+ D
Sbjct: 457 DKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGVQ-DPIAFNN 515
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+++G+ KEG SA ++ + R V D Y LI + + P A + L+ + ++G
Sbjct: 516 LIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIENG 575
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
++P ++ +MESL + + A + + MV++ +K ++ ++ G EA+
Sbjct: 576 HIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEAL 635
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+D ++ +G PD L++ C + A LL F ++ SY V +
Sbjct: 636 GRIDLLMNNGCEPDFD---GLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDAL 692
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + + ++ G A + +CK +I SL
Sbjct: 693 LTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSL 727
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 175/408 (42%), Gaps = 48/408 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL---------------------- 216
YV VG + + + F + G +P+ V+ + LL GL
Sbjct: 336 GYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAP 395
Query: 217 --------------KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
K +D V + M R+ I + +L FCK+G D+
Sbjct: 396 KDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKL 455
Query: 263 LEK-IEEE-------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
L+K IE+E + + YN +I C G+ + A L+R + ++ V D + +
Sbjct: 456 LDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLMKKGV-QDPIAFN 514
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L+ G KEG A ++ M R + + +Y LI ++ K+G+ ++K+ L M+ N
Sbjct: 515 NLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPADAKTALDGMIEN 574
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G PD+ + +++ ++GR+ +A ++ + GV + D+ ++ AL A
Sbjct: 575 GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
++ + +G P ++ L+ LC AL L D ++R+ S S+Y ++
Sbjct: 635 LGRIDLLMNNGCEPD---FDGLLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDA 691
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
G++ A S++ ++++ G D C+ LI E + +A+ L
Sbjct: 692 LLTAGKTLNAYSILCKIMQKGGATDWSSCKDLIRSLNEEGNTKQADIL 739
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 214/453 (47%), Gaps = 44/453 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYV 181
P + Y ++H L + A +L E+ + C V+ F D++ CT
Sbjct: 205 PDTVLYQTVIHALCAQGGVNEAATLLDEM--FLMGCSADVNTFNDIVHGLCT-------- 254
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL----------------KLNCI---- 221
+G +RE+ + + + G P+ ++ FLL GL +LN +
Sbjct: 255 -LGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNT 313
Query: 222 -----------DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+ ++YE MG G P+ HT++IL H CK G + L ++E++G
Sbjct: 314 VIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKG 373
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F P +VTY L+ S+C+ G ++ + +M + + +L Y ++ +CK+ ++ +A
Sbjct: 374 FAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAM 433
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ M +G PDI +YNT+I+ C +M+E++ L ++ G+ + T ++
Sbjct: 434 RFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHAL 493
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+ G A++L ++ G S+ Y+ LI ALC+D + LL + + G P+
Sbjct: 494 LRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNN 553
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ LCK V DAL L EM+++ + P + TY LI C +G A++L+++
Sbjct: 554 VSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEK 613
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ + D +LI+ +C + ++ A LL
Sbjct: 614 LHNEDVHADIITYNILISWHCKARLLHDASMLL 646
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 174/347 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ + + G P + + L++GL KL + ++ EM G P+ T+
Sbjct: 322 GKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTY 381
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
IL H FC+NG D + LE + ++G +L YN +I + CK R++DA + M
Sbjct: 382 TILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKS 441
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ TY T++ LC ++ EA LF ++H G+ + ++YNTLI A + G Q+
Sbjct: 442 QGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQD 501
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ SL +M+ +G D + +++ ++G + ++ L+ E+ G+ + Y+ LI
Sbjct: 502 AISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLIS 561
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R A L + + P + YN L+ LCK + AL L +++ + ++
Sbjct: 562 ELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHA 621
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ TY LI C +A L++ + SG+ P+ + +++ +
Sbjct: 622 DIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNF 668
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 203/470 (43%), Gaps = 67/470 (14%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDK 258
PS S N +L + +C +Y M R + P T TF+I C+ G D+
Sbjct: 131 AVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADE 190
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L + G PD V Y T+I + C +G +N+A L M+ D+ T+ +++
Sbjct: 191 ALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVH 250
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL---------- 368
GLC G++REA +L RM+ RG P+ ++Y L+ C +++E++++L
Sbjct: 251 GLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVL 310
Query: 369 --------------------YEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVE-- 405
YE MG+ G PD T I++ G K GRL SA+ L+ E
Sbjct: 311 FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREME 370
Query: 406 --------------LQRF-------------------GVSISRDIYDYLIVALCQDNRPF 432
L F G+S++ + Y+ +I A+C+D R
Sbjct: 371 DKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMD 430
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A ++ + GY P + YN ++ LC + + +A L + ++ + + TY LI
Sbjct: 431 DAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLI 490
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G +A+SL ++M+ G D LI C + +V+++ LL A+K
Sbjct: 491 HALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIK 550
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ SYN + + + + +EL K L P+ +T +I+ L K
Sbjct: 551 PNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCK 600
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 154/354 (43%), Gaps = 44/354 (12%)
Query: 146 MKMLCELVELV--KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
+K EL E + K CP + LI K+G + + K R+ D GF P
Sbjct: 324 LKEAAELYETMGSKGCPPDAHTYSILIH-------GLCKLGRLGSAMKLLREMEDKGFAP 376
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
SIV+ LL+ + D + E M G+ N +N + CK+ +D F+
Sbjct: 377 SIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFM 436
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL--- 320
++++ +G+ PD+ TYNT+I C ++ +A YL+ + V+ + +TY TL++ L
Sbjct: 437 QEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRN 496
Query: 321 --------------------------------CKEGKVREAHQLFHRMVHRGLSPDIVSY 348
C++G V + L M +G+ P+ VSY
Sbjct: 497 GSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSY 556
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI CK +++++ L EM+ + PD T ++ G K G + +ALNL+ +L
Sbjct: 557 NLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHN 616
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
V Y+ LI C+ A+ LL R G P+ + ++++ +
Sbjct: 617 EDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVR 670
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 137/336 (40%), Gaps = 32/336 (9%)
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAY 355
L ++ +R V P +Y T++ + + L+ RMVHR + P +++ A
Sbjct: 123 LDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARAL 182
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C+ G+ E+ ++L M +G PDT Q ++ +G + A L+ E+ G S
Sbjct: 183 CRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADV 242
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
+ ++ ++ LC R A L++R+ G VP+ Y L++ LC V +A +
Sbjct: 243 NTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGR 302
Query: 476 MVDRNI-------------------------------KPSLSTYRALICCFCGIGRSGEA 504
+ + N+ P TY LI C +GR G A
Sbjct: 303 VPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSA 362
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L+ EM + G P +L++ +C + A+L + K + E YN +
Sbjct: 363 MKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICA 422
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+D + M + G+ P+ T +I+ L
Sbjct: 423 VCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHL 458
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y ++H L N + A+ + ++V + C + + LI A + G +
Sbjct: 485 TYNTLIHALLRNGSWQDAISLANDMV--LHGCSLDIVSYNGLIK-------ALCRDGNVD 535
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
S + + G +P+ VS N L++ L K + ++ +EM + P+ T+N L
Sbjct: 536 RSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLI 595
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK G + LEK+ E D++TYN LIS +CK L+DA L +
Sbjct: 596 NGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGIT 655
Query: 308 PDLVTYTTLMNGLCKE 323
P+ T+ ++ ++
Sbjct: 656 PNERTWGIMVQNFVRK 671
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 191/389 (49%), Gaps = 22/389 (5%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F + +D+ PSIV +L + K+ +Y M G+ P T TFNI
Sbjct: 35 IDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNI 94
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + FC G +D + KI + G P++VT+ TL+ +C ++ DA Y+Y M R
Sbjct: 95 LINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARR 154
Query: 306 VLPDLVTYTTLMNGLCKE--GKVREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKEGKMQ 362
+ D V Y TL+NGLCK GK R A QL +M R L P+++ YNT++ CK+G +
Sbjct: 155 IRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNIN 214
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E++ L +M+ GI+PD FT ++ G + G QR V+ L+
Sbjct: 215 EARVLCSKMIVQGIFPDIFTYSSLIYGLCRAG------------QRKEVT-------SLL 255
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C +N+ A L + + G + YN LM C + V +A L MV+R +
Sbjct: 256 NGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQ 315
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY L+ +C I + EA +L M+E G++PD +LI GYC + V +A L
Sbjct: 316 PDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNL 375
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L K + + +YN+V + + G +
Sbjct: 376 LEDMFLKNLVPNIITYNSVVDGLCKSGGI 404
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 246/528 (46%), Gaps = 32/528 (6%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+ DS+ A+ F+ + D+ P+ + I+ +A ++ A+ L L+E P
Sbjct: 30 CKFDSIDDAVALFHRMV-DMHPLPSIVEFTKILGTIAKMRYYATAID-LYTLMEYKGVVP 87
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V F LI+C + +G + +F K L G +P++V+ L+ G +
Sbjct: 88 FTV-TFNILINC-------FCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDK 139
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN--GDVDKVNGFLEKIEEEGF-DPDLVT 277
+ +Y+EM I + + L + CK+ G L+K+EE P+L+
Sbjct: 140 MLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIM 199
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG------------- 324
YNT++ CK G +N+A L M + + PD+ TY++L+ GLC+ G
Sbjct: 200 YNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFC 259
Query: 325 ---KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KV EA +LF+ M+ RG DI++YN L+ YC K+ E++ L + M+ G PDT
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I++ GY ++ A NL + G+ Y+ LI C+ R A +LLE +
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM-VDRNIKPSLSTYRALICCFCGIGR 500
VP++ YN +++ LCK + DA L DEM P ++TY L+ C I
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIEC 439
Query: 501 SGEAVSLMDEML-ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+A++ ++ E P+ +LI+G C + +++A L K + D +YN
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + L K + L + + G +PN T +I+ L KG K
Sbjct: 500 ILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPK 547
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 146/314 (46%), Gaps = 39/314 (12%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + F ++ G Q I++ N L+NG N + + +++ M G P+T T+ I
Sbjct: 264 VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTI 323
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L H +C VD+ + E G PD+ +YN LI YCK R+ +A L M+ +N
Sbjct: 324 LMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKN 383
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLF-------------------------------- 333
++P+++TY ++++GLCK G + +A +L
Sbjct: 384 LVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKA 443
Query: 334 -----HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
H + R +P++ SYN LI CK ++ E+ +L M + PD T I++
Sbjct: 444 IAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLD 503
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+L A+ L+V++ G+S + Y+ LI L + RP A + + GY P
Sbjct: 504 ALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHP 563
Query: 449 SLEIYNELMESLCK 462
++ Y ++ LCK
Sbjct: 564 DVKTY--IINELCK 575
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 155/320 (48%), Gaps = 22/320 (6%)
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
S CK ++DA L+ M + LP +V +T ++ + K A L+ M ++G+
Sbjct: 27 QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVV 86
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P V++N LI +C G+M + S++ +++ G P+ T +++G+ ++L AL +
Sbjct: 87 PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146
Query: 403 VVELQRFGVSISRDIYDYLIVALCQD--NRPFAATSLLERIGQDGYV-PSLEIYNELMES 459
E+ + +Y LI LC+ +P AA LL+++ + V P+L +YN ++
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LCK ++ +A +L +M+ + I P + TY +LI C G+ E SL+
Sbjct: 207 LCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLL----------- 255
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
NG+C+ V++A L ++ + +D +YN + N + + + + +L
Sbjct: 256 --------NGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFH 307
Query: 580 RFLRLGFAPNNLTCKYMIHS 599
+ G P+ +T ++H
Sbjct: 308 MMVERGEQPDTITYTILMHG 327
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 148/305 (48%), Gaps = 19/305 (6%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
NY ++++ NNK A K+ +VE + D I+ T + Y + +
Sbjct: 285 NYNILMNGYCLNNKVGEARKLFHMMVERGEQ--------PDTITYTILMH-GYCLIDKVD 335
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ F ++ G P + S N L+ G K + + + E+M + PN T+N +
Sbjct: 336 EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVV 395
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGF----DPDLVTYNTLISSYCKKGRLNDAFYLYR-IMY 302
CK+G + + ++E + PD+ TYN L+ S C+ + A ++ +++
Sbjct: 396 DGLCKSGGILDA---WKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIF 452
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R+ P++ +Y L++G CK ++ EA LF+ M + L PDIV+YN L+ A ++
Sbjct: 453 ERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLD 512
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +LL +++ GI P+ T I++ G K GR +A + + L G D+ Y+I
Sbjct: 513 KAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGY--HPDVKTYII 570
Query: 423 VALCQ 427
LC+
Sbjct: 571 NELCK 575
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 40/197 (20%)
Query: 446 YVPSLEIYNELM--ESLCKCDSVADALLLKDEMVDRNIKPSL------------------ 485
YV + ++++ + +S CK DS+ DA+ L MVD + PS+
Sbjct: 13 YVRRIHLHSQPLPSQSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYAT 72
Query: 486 -----------------STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
T+ LI CFC +G+ A S+M ++L+ G P+ L+
Sbjct: 73 AIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMK 132
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED---GDLSKLMELQKRFLRLG 585
G+C+ + A + + +D Y + N + + + LQK R
Sbjct: 133 GFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQL 192
Query: 586 FAPNNLTCKYMIHSLWK 602
PN + ++H L K
Sbjct: 193 VKPNLIMYNTVVHGLCK 209
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 217/449 (48%), Gaps = 16/449 (3%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P+++ ++ +LISC K G++ E+ +++ K + P++VS N +++G K
Sbjct: 8 PNAI-LYNNLISC-------LCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKAR 58
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
I++ EM +G P H ++ + FCK G+V K ++ +G +PD+V +N
Sbjct: 59 NIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFN 118
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
L+S + ++++A L+R M R PD+VTY T++ GLCK K+ EA L RM
Sbjct: 119 VLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQE 178
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
+SP V+Y TLI CK ++Q++ + +M ++ + G+L+ A
Sbjct: 179 DVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEA 238
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQ-DNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ ++ R V ++ + Y +++ L + D A L+ + P Y+ L+
Sbjct: 239 SRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILIN 298
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LCK +A + EM R I P++ TY L+ + +A+ L ML+ G LP
Sbjct: 299 GLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLP 358
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D+ ++I G+C D N+A L K + +T +YN + F +D S L
Sbjct: 359 DTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLF 418
Query: 579 KRFLRLGF-----APNNLTCKYMIHSLWK 602
KR ++ G APN T + +I SL K
Sbjct: 419 KR-MQSGKNDKVPAPNMFTYEILISSLCK 446
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 188/406 (46%), Gaps = 15/406 (3%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K ++++++ F K + + + + L N L + + + +VY +M R +C +
Sbjct: 196 KFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDN 255
Query: 242 TFNILTHVFCK--NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T++++ K G+V+ E + ++ PD Y+ LI+ CK R +A +++
Sbjct: 256 TYSLVVLGLSKMDGGNVEAAKLVTEMMGKK-IAPDFYAYSILINGLCKARRPGEAKEMFQ 314
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + P +VTY TL+ GL K+++A +L + M+ +G PD SYN +I +C G
Sbjct: 315 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANG 374
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD--- 416
E+ L +M+ +GI +T+T ++ G+ K+ SA L +Q S D
Sbjct: 375 DTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQ----SGKNDKVP 430
Query: 417 -----IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
Y+ LI +LC+ ++ A LL + G+VPSL+I+ L+ L + + DA
Sbjct: 431 APNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFE 490
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L EM N + + + L+ G EA + +M ++G++PD L+ G C
Sbjct: 491 LYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLC 550
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+ ++A L+ + + + + + GD E
Sbjct: 551 WQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEF 596
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--GRIG--ICPN 239
G E++ F+ + G + + NF++ G +K W +++ M G+ PN
Sbjct: 374 GDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPN 433
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ IL CK V++ L + ++GF P L + L+S + GRL+DAF LY+
Sbjct: 434 MFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYK 493
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R N + + L++G+ + G V EA +M G+ PD +Y+ L+ C +G
Sbjct: 494 EMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQG 553
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K +++ L+ E++ +G P+ + ++ +G A L GV ++ +++
Sbjct: 554 KADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHN 613
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPS--LEIYNELMESLCKCDSVADALLLKDEMV 477
L+ + C + L+ I Q VP +E + L + + V +D +
Sbjct: 614 TLVTSCCLARK----LDYLDMIEQREGVPDVIVERIEKFRAELFREEEVKIYEETRDRKI 669
Query: 478 DRNI------KPSLSTYRAL 491
R + +P ++++RA+
Sbjct: 670 RRTMAYSEPRRPKIASFRAM 689
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 152/365 (41%), Gaps = 41/365 (11%)
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDA-FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
E G P+ + YN LIS CK G L +A YL R+ ++ P++V+Y +++G CK +
Sbjct: 3 EAGLFPNAILYNNLISCLCKAGMLAEAESYLKRM--PQHCAPNVVSYNIIIDGYCKARNI 60
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A M G P +Y++++ ++CK G + ++ + EM G PD ++
Sbjct: 61 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 120
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G + ++ A L + G Y+ +I LC+ + A LLER+ Q+
Sbjct: 121 LSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 180
Query: 447 VPSLEIYNELMESLCK--------------------CDSVADALLLK------------- 473
P+ Y L++ LCK C A ++L
Sbjct: 181 SPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASR 240
Query: 474 --DEMVDRNIKPSLSTYRALICCFCGI-GRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+M +N+ + +TY ++ + G + EA L+ EM+ + PD +LING
Sbjct: 241 VYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGL 300
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C + +A+ + + +YN + L MEL L G P+
Sbjct: 301 CKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPD- 359
Query: 591 LTCKY 595
TC Y
Sbjct: 360 -TCSY 363
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + E+FK D GF PS+ LL+ L + +D +++Y+EM RI
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 505
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ NIL + G VD+ FL+++ + G PD TY+ L+ C +G+ + A L +
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R P+ L+ LC +G + A++ + + G+ + +NTL+ + C K+
Sbjct: 566 VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKL 625
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 1/236 (0%)
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ GL P+ + YN LI CK G + E++S L + M P+ + II+ GY K
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYL-KRMPQHCAPNVVSYNIIIDGYCKARN 59
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL + E++ G + Y ++ + C+ A + + G P + +N
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ L + + +A L M R KP + TY +I C + EAV L++ M +
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ P LI+ C + +A + A+ +Y+ +FN G L
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKL 235
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 236/517 (45%), Gaps = 49/517 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y +++ L + A ++L E+ E K +V F +I+ +V
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE--KSISPNVVTFSSVIN-------GFV 425
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL+ ++ + R + G P++V+ L++G K D +VY +M G+ N
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKF 485
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + +NG +++ + G D V Y TLI K G + AF + +
Sbjct: 486 IVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQEL 545
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RN+LPD V Y +N LC GK +EA M + GL PD +YNT+I ++C++G+
Sbjct: 546 MDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGET 605
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG-------------------------RL 396
++ LL+EM + I P+ T +V G G R+
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665
Query: 397 LSA------LNLVVELQRF----GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
L A L++++++ + G+ +Y+ L+ LC AT +LE + G
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P +N L+ CK + +A +M+ +NI P+++T+ L+ +GR GEA +
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYNAVFNM 564
++ EM +SG+ P++ +L G+ K NK EA+ + K + +YNA+ +
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGH--GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISD 843
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
F + G +++ EL K + G P + T ++ S W
Sbjct: 844 FTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV-SGW 879
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 221/508 (43%), Gaps = 52/508 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P YC ++ LA + + +L E+V S V DL++ T +W K
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMV--------SRGVVMDLVTYTALMDW-LGKQ 357
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E T R L P+ V+ L++ L K + +D+ QV EM I PN TF
Sbjct: 358 GKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK---------------- 287
+ + + F K G +DK + ++E G +P++VTY TLI + K
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477
Query: 288 -------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G++ +A L++ + D V YTTL++GL K G +
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + ++ R + PD V YN I C GK +E+KS L EM G+ PD T ++
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ ++G AL L+ E++ + + Y+ L+ L A LL + G+ P
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S + ++++ + + L + + M++ + ++ Y L+ C G + +A ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EML SG+ PD+ LI G+C ++ A A + + ++N +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 569 GDLSK----LMELQKRFLRLGFAPNNLT 592
G + + L+E++K G PNNLT
Sbjct: 778 GRIGEAGTVLIEMEKS----GLEPNNLT 801
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 193/420 (45%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E+F + + G +V+ + L+ GL + + + ++ EM ++G PN
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPN 308
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L K G ++ L ++ G DLVTY L+ K+G+ ++ R
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
N+ P+ VTYT L++ LCK V EA Q+ M + +SP++V+++++I + K G
Sbjct: 369 FALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ M GI P+ T ++ G+ K +AL + ++ GV +++ I D
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVD 488
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L Q+ + A +L + G Y L++ L K + A E++DR
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P Y I C C +G+ EA S + EM G+ PD +I +C + + KA
Sbjct: 549 NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL + +YN + G + K L + GF+P++LT + ++ +
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 185/400 (46%), Gaps = 8/400 (2%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
++ N L+ G ++ V + M G+ + +N L FC+ G VD G L+
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E G DP++ TY I YC+ + +AF LY M R VL D+VT + L+ GLC++G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ EA+ LF M G +P+ V+Y TLI + K G+ +E SLL EM+ G+ D T
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRD----IYDYLIVALCQDNRPFAATSLLER 440
++ GK+G+ + V + RF +S + Y LI ALC+ + A +L
Sbjct: 349 ALMDWLGKQGK----TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + P++ ++ ++ K + A K M +R I P++ TY LI F
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A+ + +ML G+ + I L+NG + +A AL + D +Y
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + GD+ + + + P+ + I+ L
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 4/365 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T +NIL + V L ++ + G D VT NTL++ C+ G+++ A L
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ L D++ + TL+ G C+ G A + RM +GL D+V YNTL+ +C+
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ ++ +L M G+ P+ T + Y + + A +L + R GV +
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ LC+D R A +L + + G P+ Y L++SL K + L L EMV
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R + L TY AL+ G++ E + L + P+ VLI+ C +V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVD 396
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+AE +L +K + ++++V N F + G L K E ++ G PN +T +I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456
Query: 598 HSLWK 602
+K
Sbjct: 457 DGFFK 461
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 165/366 (45%), Gaps = 17/366 (4%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+++ ++ L+R + R + +P+ V+ N LL L + V EM + G+
Sbjct: 81 YSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVP 132
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP-DLVTYNTLISSYCKKGRLNDAFY 296
+ T N L C+NG VD ++ G D++ +NTLI+ YC+ G A
Sbjct: 133 FDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGDTPAALS 190
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ M + + D+V Y TL+ G C+ G+V A + M G+ P++ +Y I YC
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYC 250
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ ++E+ L M+ NG+ D T +V G ++GR A L E+ + G + +
Sbjct: 251 RTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHV 310
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL---CKCDSVADALLLK 473
Y LI +L + R SLL + G V L Y LM+ L K D V D L
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFA 370
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+ N+ P+ TY LI C EA ++ EM E + P+ +ING+
Sbjct: 371 ---LSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 534 KDVNKA 539
++KA
Sbjct: 428 GLLDKA 433
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 141/329 (42%), Gaps = 39/329 (11%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P++++ N L+ GL +++ + EM G P++ T + ++ +D +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
E + G D+ YNTL+ C G A + M + PD +T+ L+ G
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK + A + +M+H+ +SP+I ++NTL+ G++ E+ ++L EM +G+ P+
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T I+ G+GK+ + A+ L E+
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEM---------------------------------- 825
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+G+ G+VP + YN L+ K + A L +M R + P+ TY L+ + I
Sbjct: 826 VGK-GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884
Query: 501 SGEAVSLMDEMLESGMLPD----SQICRV 525
E + +M E G P S ICR
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRA 913
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 214/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S A+ ++ +V+ + C ++ + +++ K
Sbjct: 111 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN-------GLCK 161
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I +F K + +V N +++ L K +D +++EM GI PN T
Sbjct: 162 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 221
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E+ +P+LVT+N LI ++ K+G+ +A L+ M
Sbjct: 222 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 281
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD+ TY +L+NG C ++ +A Q+F MV + PD+ +YNTLI +CK +++
Sbjct: 282 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 341
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ DT T ++QG +G +A + ++ GV Y L+
Sbjct: 342 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + + A + + + + + IY ++E +CK V D L + + +K
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 461
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY +I C EA +L+ +M E G LPDS LI + + D + L
Sbjct: 462 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 521
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 522 IREMRSCRFVGDASTIGLVANML-HDGRLDK 551
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 194/416 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K ID + + +M I + FN +
Sbjct: 132 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK VD +++E +G P++VTY++LIS C GR +DA L M + +
Sbjct: 192 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 251
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+LVT+ L++ KEGK EA +L M+ R + PDI +YN+LI +C ++ ++K +
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ L E+ G+ Y LI L
Sbjct: 312 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 371
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D A + +++ DG P + Y+ L++ LC + AL + D M IK +
Sbjct: 372 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 431
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ +I+G C ++ + +A ALL
Sbjct: 432 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 491
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + D+ +YN + DGD + EL + F + T + + L G
Sbjct: 492 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 547
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 190/414 (45%), Gaps = 4/414 (0%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
S K + +G++PSIV+ + LLNG I + ++M +G P+T TF L H
Sbjct: 63 SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 122
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+ + ++++ + G P+LVTY +++ CK+G ++ AF L M +
Sbjct: 123 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 182
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+V + T+++ LCK V +A LF M +G+ P++V+Y++LI C G+ ++ LL
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALC 426
+M+ I P+ T ++ + KEG+ + A L ++ + SI DI+ Y LI C
Sbjct: 243 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK--RSIDPDIFTYNSLINGFC 300
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+R A + E + P L+ YN L++ CK V D L EM R +
Sbjct: 301 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 360
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LI G A + +M+ G+ PD +L++G C + KA + +
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D Y + + G + +L G PN +T MI L
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 176/382 (46%), Gaps = 2/382 (0%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN--GFLEKIEEEGFDPDLVTY 278
+D ++ M + P+ FN L K D V L K+ + G++P +VT
Sbjct: 23 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
++L++ YC R++DA L M PD +T+TTL++GL K EA L RMV
Sbjct: 83 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG P++V+Y ++ CK G + + +LL +M I D I+ K +
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
ALNL E++ G+ + Y LI LC R A+ LL + + P+L +N L++
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ K +A L D+M+ R+I P + TY +LI FC R +A + + M+ P
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D LI G+C K V L + + + DT +Y + DGD ++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
K+ + G P+ +T ++ L
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGL 404
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 161/331 (48%), Gaps = 2/331 (0%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRI--MYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P + +N L+S+ K + + L + M + P +VT ++L+NG C ++ +A
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD +++ TLI K E+ +L+ M+ G P+ T ++V G
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + A NL+ +++ + I++ +I +LC+ A +L + + G P++
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC +DA L +M+++ I P+L T+ ALI F G+ EA L D+
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 279
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD LING+CM ++KA+ + F K D ++YN + F +
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ EL + G + +T +I L+
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 239/504 (47%), Gaps = 45/504 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y IV+ L + + S A ++L E+ ++ D H + LI + K
Sbjct: 271 PDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVA--YTTLID-------SLFKA 321
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+F + + G +V C L++GL K + + ++ + ++ + PN+ T+
Sbjct: 322 GSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITY 381
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L +CK GD+++V L+++EE+ +P+++TY+++I+ Y KKG L++A + + M
Sbjct: 382 TALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLD 441
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+N++P+ Y L++G CK GK A L++ M GL + V ++ L+ + +M E
Sbjct: 442 QNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDE 501
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++ LL ++ G+ D ++ G+ K G+ +ALN+V E+ + Y+ LI
Sbjct: 502 AEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLIN 561
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
L + + + A S+ + + G P+ YN ++++ CK + +AL L +EM I P
Sbjct: 562 GLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMP 620
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING-------------- 529
S T L+ G +A+++++EM G+ P+ I RVL+N
Sbjct: 621 SSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMH 680
Query: 530 ---------------------YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+C + KA ++L + + + DT +YNA+ + E
Sbjct: 681 EQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCES 740
Query: 569 GDLSKLMELQKRFLRLGFAPNNLT 592
+ K + + L G +PN +T
Sbjct: 741 SHVKKALATYTQMLNEGVSPNIVT 764
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 213/457 (46%), Gaps = 42/457 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++ E+ +K LD P+ L++G K + +Y EM G+
Sbjct: 422 GYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKV 481
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N F++L + + +D+ L+ + G D V Y +L+ + K G+ + A +
Sbjct: 482 NNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMV 541
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +++ D+VTY L+NGL + GK EA ++ M+ GL+P+ +YN +I AYCK+
Sbjct: 542 EEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQ 600
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV------- 411
G++ + L EM + I P + TC +V G + G + A+N++ E+ G+
Sbjct: 601 GELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIH 660
Query: 412 ----------------------------SISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+++ Y+ LIV C+ ATS+L+ + +
Sbjct: 661 RVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIR 720
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
DG+V YN L+ C+ V AL +M++ + P++ TY L+ G G E
Sbjct: 721 DGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAE 780
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF---FAKKFQIYDTESYNA 560
L D+M E+G+ PD+ LI+GY K NK E++ + A+ F + T +YN
Sbjct: 781 RDELFDKMKENGLNPDASTYDTLISGYG--KIGNKKESIRLYCEMVAQGF-VPKTSTYNV 837
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + FA+ G + + EL G P++ T +I
Sbjct: 838 LISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILI 874
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 221/503 (43%), Gaps = 60/503 (11%)
Query: 162 SVDVFQDLISCTEDCNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
S+ V +D T CN + ++GL + + + G ++ N L++G K
Sbjct: 101 SIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKA 160
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE--------- 269
+ + E M + G+ + ++N L + FCK G+ DK L +I E
Sbjct: 161 GEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFF 220
Query: 270 ------------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ DL+TY T+IS+YCK+ L +A LY M LPD+VTY++++
Sbjct: 221 NIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIV 280
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
NGLCK+G++ EA +L M G+ P+ V+Y TLI + K G E+ + +++ G+
Sbjct: 281 NGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMT 340
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
D C +V G K + A ++ L + + + Y LI C+ SL
Sbjct: 341 LDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESL 400
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L+ + + P++ Y+ ++ K + +A+ + +M+D+NI P+ Y LI +C
Sbjct: 401 LQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCK 460
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-------------- 543
G+ A L +EM SG+ ++ + VL+N K +++AE LL
Sbjct: 461 AGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVN 520
Query: 544 ------GFF---------------AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
GFF +K +D +YN + N E G + + +
Sbjct: 521 YTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMI 579
Query: 583 RLGFAPNNLTCKYMIHSLWKGME 605
+G APN T MI + K E
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGE 602
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 190/409 (46%), Gaps = 59/409 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K+G + + R +V + V+ N ++ G + ++Q + M + C
Sbjct: 54 AWCKMGNLILALDLLR---NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCF 110
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T NIL FC+ G ++ + G D++ +NTLI YCK G ++ A L
Sbjct: 111 DTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLV 170
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RG----------------- 340
M + +L D+V+Y TL+NG CK G+ +A L H + RG
Sbjct: 171 ERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDD 230
Query: 341 ---LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
L D+++Y T+I YCK+ ++E+++L EM+ NG PD T IV G K+GRL
Sbjct: 231 NLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLS 290
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVAL-----------CQ------------------- 427
A L+ E+++ GV + Y LI +L CQ
Sbjct: 291 EAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLV 350
Query: 428 -----DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
++P A + + + +P+ Y L++ CK + L EM +++I
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHIN 410
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P++ TY ++I + G EA+++M +ML+ ++P++ + +LI+GYC
Sbjct: 411 PNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYC 459
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 193/421 (45%), Gaps = 24/421 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+++ N L+ + Q +Y EM + PN +T N+L H +CK G++
Sbjct: 8 PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ E D VTYNT+I +C+ G +N AF IM +++ D +T L+ G C+
Sbjct: 68 LRNVDVE---VDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCR 124
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + ++ +V G D++ +NTLI YCK G+M + L+ M G+ D +
Sbjct: 125 IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS 184
Query: 383 CQIIVQGYGKEGRLLSALNLVVEL-QRFGVS----------ISRD----------IYDYL 421
++ G+ K G A +L+ E+ + GV I +D Y +
Sbjct: 185 YNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTI 244
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ + A +L E + +G++P + Y+ ++ LCK +++A L EM +
Sbjct: 245 ISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV 304
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ Y LI G + EA + +++ GM D +C L++G +AE
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ +K I ++ +Y A+ + + + GD+ ++ L + PN +T +I+
Sbjct: 365 MFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYT 424
Query: 602 K 602
K
Sbjct: 425 K 425
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 3/385 (0%)
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
K + E EL+KD S + D ++ T + + K G + + + +V
Sbjct: 497 KRMDEAEELLKDVT-SRGLLLDHVNYTSLMD-GFFKAGKESAALNMVEEMTEKSIPFDVV 554
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L+NGLL+ + VY M +G+ PN T+NI+ +CK G++D ++
Sbjct: 555 TYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEM 613
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ P +T NTL+ + G + A + M + P+LV + L+N K GK
Sbjct: 614 KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKA 673
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
Q+ ++V GL + +YN LI +C+ +++ S+L M+ +G DT T +
Sbjct: 674 NAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNAL 733
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
++GY + + AL ++ GVS + Y+ L+ L L +++ ++G
Sbjct: 734 IRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGL 793
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P Y+ L+ K + +++ L EMV + P STY LI F +G+ +A
Sbjct: 794 NPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARE 853
Query: 507 LMDEMLESGMLPDSQICRVLINGYC 531
L++EM G+ P S +LI G+C
Sbjct: 854 LLNEMQVRGVPPSSSTYDILICGWC 878
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 140/324 (43%), Gaps = 24/324 (7%)
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + N++P L+ + L+ G V + ++ M+ + P++ ++N L+ A+CK G
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + LL + + DT T ++ G+ + G + A + + + +
Sbjct: 61 LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ C+ +++ + G + +N L++ CK ++ AL L + M
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV--------------- 525
+ + +Y LI FC G +A SL+ E+ ES + DS +
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237
Query: 526 ------LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+I+ YC + + +A AL + D +Y+++ N +DG LS+ EL +
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297
Query: 580 RFLRLGFAPNNLTCKYMIHSLWKG 603
++G PN++ +I SL+K
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKA 321
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 23/228 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + ++++ T+ + L+ G P+IV+ N LL GLL + + +++++M G+ P
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNP 795
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ L + K G+ + ++ +GF P TYN LIS + K G+++ A L
Sbjct: 796 DASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELL 855
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R V P TY L+ G C K H R + + D
Sbjct: 856 NEMQVRGVPPSSSTYDILICGWCNLSK----HPDLDRTLKKIYRTD-------------- 897
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+K+L+ EM G P T I + + G++L A L+ E+
Sbjct: 898 -----AKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 218/493 (44%), Gaps = 49/493 (9%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D + P Y ++H + ++ A KM E+ L+ D S + F D
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIV-SWNSFMD-------- 229
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ K G +E+ + F G +P+IV+ LL+G C + M GI
Sbjct: 230 --SLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGI 287
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
N F IL + K G +D+ L +++ +G PD+ TY+TLIS+ C+ GRL DA
Sbjct: 288 VANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVD 347
Query: 297 LYRIMYRRNVLPDLVTYTTLMNG------------------------------------L 320
+ M V P+ V Y +L+ G +
Sbjct: 348 KFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSI 407
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CKEG+V +AH +F + G DI+ +NTLI YC G+M ++ S+L M+ GI PDT
Sbjct: 408 CKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT +V GY K GR+ LNL E+ + + Y+ ++ L + R AA +L
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G SL YN +++ LC+ + +A+++ ++ N+K +++T +I + R
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L + +SG++P++ ++I E V +A+ + K + N
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647
Query: 561 VFNMFAEDGDLSK 573
E G++ K
Sbjct: 648 TIRTLLEKGEIVK 660
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 189/403 (46%), Gaps = 36/403 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ N +++G K I + +Y EM + G P+ T N + + CK VD
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELL 173
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ + G P+ VTY ++I Y GR +A ++R M R ++PD+V++ + M+ LCK
Sbjct: 174 LRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCK 233
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSY------------------------------NTLI 352
G+ +EA ++F+ M +G P+IV+Y N L+
Sbjct: 234 HGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLV 293
Query: 353 F-----AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
F AY K G M E+ +L EM G G+ PD FT ++ + GRL A++ ++
Sbjct: 294 FTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMI 353
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSV 466
GV + +Y LI C A L+ + +G P++ +N ++ S+CK V
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA + D + D + + + LI +C +G G+A S++D M+ +G+ PD+ L
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+NGY ++ L + K T +YN + + G
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 201/413 (48%), Gaps = 3/413 (0%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-GIC-PNTHTFNILTHVF 250
R+ ++G P S +L L N Q + M + G+C P+ T+N + H F
Sbjct: 67 LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGF 126
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
K G + K ++ ++GF PD+VT+N++I++ CK +++A L R M V P+
Sbjct: 127 FKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNK 186
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
VTYT++++G G+ EA ++F M RGL PDIVS+N+ + + CK G+ +E+ + Y
Sbjct: 187 VTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYS 246
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G P+ T I++ GY EG ++ ++ G+ + ++ LI A +
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGM 306
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A +L + G P + Y+ L+ +LC+ +ADA+ ++M+ ++P+ Y +
Sbjct: 307 MDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHS 366
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGM-LPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI FC G +A L+ EM+ +G+ P+ +++ C E V A +
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDI 426
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +N + + + G++ K + + G P+ T +++ +K
Sbjct: 427 GERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFK 479
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 172/380 (45%), Gaps = 40/380 (10%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC--KNGDVDKVN 260
P+I + ++NG + + + + R G+ + N + C K D D V
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD-DAVK 64
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL--PDLVTYTTLMN 318
L ++ E G PD +Y ++ C R A L R+M + + PD+VTY T+++
Sbjct: 65 VLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIH 124
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G KEGK+ +A L+H M+ +G PD+V++N++I A CK + ++ LL +M+ NG+ P
Sbjct: 125 GFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPP 184
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ GY GR A + E+ G+ ++ + +LC+ R A +
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVAD------------------------------ 468
+ G+ P++ Y L+ AD
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304
Query: 469 -----ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
A+L+ EM + + P + TY LI C +GR +AV ++M+ +G+ P++ +
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364
Query: 524 RVLINGYCMEKDVNKAEALL 543
LI G+C D+ KA+ L+
Sbjct: 365 HSLIQGFCTHGDLVKAKELV 384
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 198/420 (47%), Gaps = 14/420 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAY 180
+P Y +++H A F+ M + +V +C VF LI AY
Sbjct: 253 RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL----VFTILID-------AY 301
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G++ E+ + G P + + + L++ L ++ + + +M G+ PNT
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L FC +GD+ K + ++ G P++ +N+++ S CK+GR+ DA +++
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFD 421
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
++ D++ + TL++G C G++ +A + M+ G+ PD +YNTL+ Y K G
Sbjct: 422 LVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSG 481
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + +L EM I P T T II+ G + GR ++A ++ E+ G ++S Y+
Sbjct: 482 RIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYN 541
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC++N A + +++ ++ N ++ S+ +A L + D
Sbjct: 542 IILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDS 601
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ STY +I G EA ++ M +SG P S++ I + ++ KA
Sbjct: 602 GLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 3/302 (0%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R P + TY +MNG C+ + F R++ GL D + NT++ C + +
Sbjct: 2 RVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDD 61
Query: 364 S-KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDY 420
+ K LL M G PD F+ I+++ + R AL+L+ + + S D+ Y+
Sbjct: 62 AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I ++ + A +L + Q G+VP + +N ++ +LCK +V +A LL +MVD
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P+ TY ++I + +GR EA + EM G++PD ++ C +A
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ A K + +Y + + +A +G + +M G N L +I +
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301
Query: 601 WK 602
K
Sbjct: 302 AK 303
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 179/458 (39%), Gaps = 50/458 (10%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSA 109
+P+ + N +D +C + ++ K P++ + I +
Sbjct: 216 GLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADM 275
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF--Q 167
++FFN +K D I + +++ A AM +L E+ + S DVF
Sbjct: 276 MSFFNTMKGD-GIVANCLVFTILIDAYAKRGMMDEAMLILSEM----QGQGLSPDVFTYS 330
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LIS A ++G + ++ F + + G QP+ V + L+ G + + ++
Sbjct: 331 TLIS-------ALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKEL 383
Query: 228 YEEMGRIGIC-PNTHTFNILTHVFCKNGDV------------------------------ 256
EM GI PN FN + H CK G V
Sbjct: 384 VYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYC 443
Query: 257 -----DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K L+ + G PD TYNTL++ Y K GR++D L+R M + + P V
Sbjct: 444 LVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTV 503
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY +++GL + G+ A ++ H M+ G + + +YN ++ C+ E+ + ++
Sbjct: 504 TYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKL 563
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ + T ++ R A +L + G+ + Y +I L ++
Sbjct: 564 CTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSV 623
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
A ++ + + G P + N+ + +L + + A
Sbjct: 624 EEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I + FR+ D +P+ V+ N +L+GL + ++ EM G
Sbjct: 476 GYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTV 535
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+NI+ C+N D+ +K+ ++ T NT+I+S R +A L+
Sbjct: 536 SLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLF 595
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P+ TY ++ L KEG V EA +F M G +P N I ++
Sbjct: 596 SAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEK 655
Query: 359 GKMQESKSLLYEMMGNGI 376
G++ ++ + + ++ G I
Sbjct: 656 GEIVKAGNYMSKVDGKSI 673
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/455 (26%), Positives = 217/455 (47%), Gaps = 8/455 (1%)
Query: 156 VKDCPHSVDVFQDLIS-----CTEDCNWAYVKVGLIRE---SFKTFRKTLDVGFQPSIVS 207
VK ++D + +++ C +D N + V ++ + + +G +P++ +
Sbjct: 4 VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVST 63
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N ++N L +LN + V M +IG+ P+ TF + + C G+V + F++ ++
Sbjct: 64 HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+ G++ D T +I+ CK G + A + M +N D+ Y+ +++GLCK+G V
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVF 183
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA LF +M +G+ P++ +YN LI C + +E+ LL MM GI PD T +I
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIA 243
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ K G + A ++ + G+ + Y+ +I A C N+ A + + + + G +
Sbjct: 244 GRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCL 303
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ YN L+ C+ ++ A+ EMV+ + P + T+ LI FC G+ A L
Sbjct: 304 PNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKEL 363
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M + G LPD Q C ++++G ++A +L K D Y+ + N
Sbjct: 364 FFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCS 423
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L+ +EL G + +T MI+ L K
Sbjct: 424 SGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCK 458
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ F + G QP++ + N L++GL + + + M R GI P+
Sbjct: 178 KDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 237
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN++ F K G + + + G + ++VTYN++I ++C ++ DA ++ +M
Sbjct: 238 TFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLM 297
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ LP++VTY +L++G C+ + +A MV+ GL PD+V+++TLI +CK GK
Sbjct: 298 IRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKP 357
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+K L + M +G PD TC II+ G K A++L EL++ + IY +
Sbjct: 358 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 417
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ +C + A L + G + YN ++ LCK + DA L +M +
Sbjct: 418 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 477
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY + ++ + M G ++ ++LIN + NK
Sbjct: 478 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYF----SANKENR 533
Query: 542 LLGFFAKKF 550
F +KF
Sbjct: 534 AFQVFLQKF 542
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 213/493 (43%), Gaps = 14/493 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCN 177
+ +KP S + ++++ L N F +L + ++ S+ F +++ C E
Sbjct: 55 IGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKI--GVEPSIVTFTTIVNGLCVE--- 109
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
G + ++ + D+G++ + ++NGL K+ ++M
Sbjct: 110 ------GNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCN 163
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ + CK+G V + ++ +G P+L TYN LI C R +A L
Sbjct: 164 LDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPL 223
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M R+ ++PD+ T+ + K G + A +F M H G+ ++V+YN++I A+C
Sbjct: 224 LANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCM 283
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+M+++ + M+ G P+ T ++ G+ + + A+ + E+ G+
Sbjct: 284 LNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVT 343
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ LI C+ +P AA L + + G +P L+ +++ L KC ++A+ L E+
Sbjct: 344 WSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE 403
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
N + Y ++ C G+ +A+ L + G+ D ++ING C E ++
Sbjct: 404 KMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLD 463
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AE LL + D +YN ++SK + GF N T K +I
Sbjct: 464 DAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI 523
Query: 598 HSLWKGME-RKFQ 609
+ E R FQ
Sbjct: 524 NYFSANKENRAFQ 536
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 187/383 (48%), Gaps = 7/383 (1%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ CP +V + +I+ + G + +++ F + +D G QP++V+ +++GL
Sbjct: 197 RSCPPNVVSYAIVIN-------GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K +D+ V+++M G+ P+ T+N L H + G +V LE++ G PD
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TY +L++ C GR +A +L+ M R+ + P++ Y L++G +G + E H L + M
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V GLSPD +N + AY K+ + E+ + +M G+ PD ++ K GR+
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A+ ++ GV+ + +++ L+ LC ++ A + G P + +N +
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ +LC V A L D M +P + +Y LI C +GR EA +D ML G+
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549
Query: 517 LPDSQICRVLINGYCMEKDVNKA 539
PD L++GYC ++ A
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDA 572
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 197/454 (43%), Gaps = 42/454 (9%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM----GRIGICPNTHTFNILTHV 249
++ ++G P +VS N LL G ++ ++ M GR PN ++ I+ +
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR-SCPPNVVSYAIVING 212
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK--------------------- 288
F G VDK ++ + G P++VTY T+I CK
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272
Query: 289 --------------GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
G+ + + M + PD TY +L+N LC G+ REA LF
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFD 332
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M+ +G+ P++ Y LI Y +G + E LL M+ NG+ PD II Y K+
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ A+++ ++++ G+S Y LI ALC+ R A ++ +G P++ ++N
Sbjct: 393 MIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN 452
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ LC D A EM+++ I+P + + ++C C G+ +A L+D M
Sbjct: 453 SLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERV 512
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G P LI G+C+ +++A L D +YN + + + G +
Sbjct: 513 GTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDA 572
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ + LR G P +T ++H L+ R+F
Sbjct: 573 YGVFREMLRNGITPGVVTYSTILHGLFT--TRRF 604
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 192/415 (46%), Gaps = 2/415 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+ +G +E + + G +P + LLN L + +++ M R GI P
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKP 341
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + IL H + G + +++ L + E G PD +N + ++Y KK +++A +++
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + PD+V Y L++ LCK G+V +A F++M++ G++P+I +N+L++ C
Sbjct: 402 NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +++K +EM+ GI PD I+ +G+++ A L+ ++R G Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISY 521
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C R A L+ + G P YN L+ C+ + DA + EM+
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P + TY ++ R EA L M+ SG + I +++NG V++
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641
Query: 539 AEALL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
A L +K FQ+ + ++N + + G M L G P+ T
Sbjct: 642 AFKLFQSLCSKDFQL-EITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 191/422 (45%), Gaps = 9/422 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP + Y +++H A S +L +VE H + F + + AY
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI--FNIIFT-------AYA 389
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K +I E+ F K G P +V+ L++ L KL +D + +M G+ PN
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L + C +K F ++ +G PD+V +NT++ + C KG++ A L +M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R P +++YTTL+ G C G++ EA + M+ GL PD +YNTL+ YC+ G++
Sbjct: 510 ERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ + EM+ NGI P T I+ G R A L + + G + IY+ +
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L ++N A L + + + + +N ++ +L K DA+ L + +
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + TY + G E L M +SG P+S++ L+ D+ +A A
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749
Query: 542 LL 543
L
Sbjct: 750 YL 751
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 4/334 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ- 331
PD TY+ LI +C+ GRL F + ++ + + + L+ GLC ++ EA
Sbjct: 92 PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM---MGNGIYPDTFTCQIIVQ 388
L RM G +PD+VSYNTL+ +C E + +E+ LL+ M G P+ + I++
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ EG++ A NL +E+ G+ + Y +I LC+ A + +++ G P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ YN L+ + + + +EM +KP TY +L+ C GR EA L
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D M+ G+ P+ I +LI+GY + +++ LL + D +N +F +A+
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + M + + + G +P+ + +I +L K
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCK 425
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 211/523 (40%), Gaps = 118/523 (22%)
Query: 154 ELVKDCPHSVD----VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN 209
++++C V + LI C + ++G + F TF L G++ + N
Sbjct: 81 RMIRECTIKVTPDPCTYSILIGC-------FCRMGRLEHGFATFGLILKSGWRVN----N 129
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
++N LLK G+C C+ D+ ++++ E
Sbjct: 130 IVINQLLK-----------------GLCDAKR--------LCEAMDI-----LVKRMPEL 159
Query: 270 GFDPDLVTYNTLISSYCK--------------------------------------KGRL 291
G PD+V+YNTL+ +C +G++
Sbjct: 160 GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQV 219
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+ A+ L+ M R + P++VTYTT+++GLCK V A +F +M+ +G+ PD +YN L
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFT-------------CQ-------------- 384
I Y GK +E +L EM +G+ PD +T C+
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGI 339
Query: 385 --------IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
I++ GY +G L +L+ + G+S I++ + A + A
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+ ++ Q G P + Y L+++LCK V DA+L ++M++ + P++ + +L+ C
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+ + +A EML G+ PD ++ C + V KA+ L+ +
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
SY + G + + + L +G P+ T ++H
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHG 562
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 178/437 (40%), Gaps = 22/437 (5%)
Query: 4 ISPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVD 63
+SP F I F + + A + I + + LS P+ N ++D
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEA-----MHIFNKMKQQGLS-------PDVVNYGALID 421
Query: 64 LICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIK 123
+C + D+ L Q + + P++ S V C D F + + I+
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN-SLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + I+ L + A +++ +L+E V P V + LI + V
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRP-GVISYTTLIG-------GHCLV 531
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ K+ L VG +P + N LL+G + ID + V+ EM R GI P T+
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + H + + G ++ YN +++ K +++AF L++ +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++ ++ T+ ++ L K G+ +A LF + GL PD+ +Y + +EG ++E
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
L M +G P++ +V+ G + A + +L S+ LI
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771
Query: 424 ALCQDNRPFAATSLLER 440
L +D ATSL E+
Sbjct: 772 LLSRDEYHHHATSLPEK 788
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 181/339 (53%), Gaps = 1/339 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ K +++G++P IV+ N +++ L K ++ ++E+GR GI PN T+
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + C +G + L + + P+++TY+ L+ ++ K G++ +A ++ M R +
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD+VTY++L+NGLC ++ EA+Q+F MV +G PD+VSYNTLI +CK ++++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGM 350
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L +M G+ +T T ++QG+ + G + A ++ FGVS Y+ L+ L
Sbjct: 351 KLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGL 410
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C + A + E + + + Y +++ +CK V DA L + + +KP +
Sbjct: 411 CDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDI 470
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLP-DSQIC 523
TY ++ C G E +L +M + G++ DS +C
Sbjct: 471 VTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLC 509
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 193/401 (48%), Gaps = 6/401 (1%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ K L +G++P V+ L+NG + N + + ++M IG P+ +N +
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIID 198
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK V+ F ++I +G P++VTY L++ C GR NDA L R M +R + P
Sbjct: 199 SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+++TY+ L++ K GKV EA ++F MV + PDIV+Y++LI C ++ E+ +
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M+ G +PD + ++ G+ K R+ + L ++ + G+ + Y+ LI Q
Sbjct: 319 DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A ++ G P + YN L+ LC + AL++ ++M + + TY
Sbjct: 379 GDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I C G+ +A L + G+ PD +++G C + ++ EAL K
Sbjct: 439 TTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKM-K 497
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ + +S + DGD++ EL K+ L G+AP+
Sbjct: 498 QEGLMKNDSM-----LCLGDGDITISAELIKKMLSCGYAPS 533
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 196/425 (46%), Gaps = 1/425 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ FR+ + PSIV N LL+ ++K+ D + ++M +GI + +TFNI
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + FC V L K+ + G++PD VT +L++ +C++ R++DA L M
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+V Y +++ LCK +V +A F + +G+ P++V+Y L+ C G+ ++
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA 245
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL +M+ I P+ T ++ + K G++L A + E+ R + Y LI L
Sbjct: 246 RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGL 305
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C +R A + + + G P + YN L+ CK V D + L +M R + +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNT 365
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY LI F +G +A +M G+ PD +L+ G C + KA +
Sbjct: 366 VTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFED 425
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WKGM 604
K D +Y V + G + L G P+ +T M+ L KG+
Sbjct: 426 MQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 605 ERKFQ 609
+ + +
Sbjct: 486 QHEVE 490
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 144/280 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + ++ F++ G +P++V+ L+NGL + ++ +M + I PN
Sbjct: 202 KTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVI 261
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F KNG V + E++ DPD+VTY++LI+ C R+++A ++ +M
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD+V+Y TL+NG CK +V + +LF +M RGL + V+YNTLI + + G +
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +M G+ PD +T I++ G G L AL + ++Q+ + + Y +
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
I +C+ + A L + G P + Y +M LC
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+L+DA L+R M + P +V + L++ + K K L +M G+ D+ ++N
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I +C ++ + S+L +M+ G PD T +V G+ + R+ A++LV ++
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G Y+ +I +LC+ R A + IG+ G P++ Y L+ LC DA
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +M+ R I P++ TY AL+ F G+ EA + +EM+ + PD LING
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C+ +++A + K D SYN + N F + + M+L ++ + G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNN 364
Query: 590 NLTCKYMIHSLWK 602
+T +I ++
Sbjct: 365 TVTYNTLIQGFFQ 377
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 19/351 (5%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V+ AL FF + I+P Y +V+ L + +++ A ++L ++++ +
Sbjct: 201 CKTRRVNDALDFFKEIGRK-GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK--RKIT 257
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + L+ A+VK G + E+ + F + + + P IV+ + L+NGL +
Sbjct: 258 PNVITYSALLD-------AFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID+ Q+++ M G P+ ++N L + FCK V+ K+ + G + VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNT 370
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI + + G ++ A + M V PD+ TY L+ GLC G + +A +F M
Sbjct: 371 LIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSE 430
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ DIV+Y T+I CK GK++++ L + G+ PD T ++ G +G
Sbjct: 431 MDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVE 490
Query: 401 NLVVELQRFGVSISRDIYDYLIVALC-QDNRPFAATSLLERIGQDGYVPSL 450
L ++++ G+ + + LC D + L++++ GY PSL
Sbjct: 491 ALYTKMKQEGLMKNDSM-------LCLGDGDITISAELIKKMLSCGYAPSL 534
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%)
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
D+ + L +D + A +L + + PS+ +N L+ ++ K + L +
Sbjct: 51 DLRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKK 110
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M I+ L T+ +I CFC + A+S++ +ML+ G PD L+NG+C
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
V+ A +L+ + D +YNA+ + + ++ ++ K R G PN +T
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230
Query: 596 MIHSL 600
+++ L
Sbjct: 231 LVNGL 235
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 220/469 (46%), Gaps = 37/469 (7%)
Query: 170 ISCTEDC----NWAYVKVGLIRESFKTFRKTLDVGFQ-PSIVSCNFLLNGLLKLNCIDQC 224
++CTED A+ + G + KTF + D+G + P + N LL+ LL+ N +
Sbjct: 82 VACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAV 141
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
VY+ M + G+ PN +T+N+L C+N VD L+++ +G PD V++ T++S
Sbjct: 142 VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 201
Query: 285 YCKKGRLNDA------------------------FYLYRI------MYRRNVLPDLVTYT 314
CK GR+ +A F ++ + M +R + P++VTYT
Sbjct: 202 MCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 261
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T+++ CK ++R A + RMV G +P+++++ L+ + ++GK+ ++ S+ + M+
Sbjct: 262 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 321
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G P T + ++++G G L AL+ ++R + + Y L+ A
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + G P++ +Y +++ LCK A L D+M+ N P+ T+ LI
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL-LGFFAKKFQIY 553
C GR G A+++ M +G P+ + L++G E + A A+ + F++
Sbjct: 442 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFEL- 500
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN V N + M L R + G P+ T +IH+ K
Sbjct: 501 SLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCK 549
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 184/407 (45%), Gaps = 9/407 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E P ++Y +VH L + ++ E+V+ + +V + ++ A+
Sbjct: 217 ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQ--RGLQPNVVTYTTIVD-------AF 267
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K +R + + + +G P++++ L+ G + + ++ M G P+T
Sbjct: 268 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 327
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++N+L C GD+ F ++ P+ TY+TL+ + G L+ A ++
Sbjct: 328 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 387
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M P++V YT +++ LCK+ +A L +M+ P+ V++NTLI C G+
Sbjct: 388 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 447
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + ++ + M NG +P+ T ++ G +EG A +V+E+ G +S Y+
Sbjct: 448 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 507
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LCQ A LL R+ G P +N ++ + CK V+ A L +M N
Sbjct: 508 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 567
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ Y LI C G+ A+ + +ML G+ P+ VL+
Sbjct: 568 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 44/374 (11%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y IV + A +L +V + C +V F L+ +
Sbjct: 253 LQPNVVTYTTIVDAFCKARELRMACAILARMVSM--GCTPNVLTFTALVK-------GFF 303
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + ++ + +D G+ PS +S N L+ GL + + + M R + PN
Sbjct: 304 EDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNAT 363
Query: 242 TFNILTHVFCKNGDVD-----------------------------------KVNGFLEKI 266
T++ L F GD+D + ++K+
Sbjct: 364 TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM 423
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ P+ VT+NTLI C GR+ A ++ M R P+ TY L++GL +EG
Sbjct: 424 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNH 483
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++A + M++ G +V+YNT+I C+ + + LL MM GI PD FT I
Sbjct: 484 KDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ Y KEG++ A L+ ++ + Y LI LC + A L ++ +G
Sbjct: 544 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 603
Query: 447 VPSLEIYNELMESL 460
P+ +N L+ ++
Sbjct: 604 CPNEATWNVLVRAI 617
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V +++ L K DQ + ++M PNT TFN L C G V +
Sbjct: 392 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 451
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ G P+ TYN L+ ++G DAF + M LVTY T++N
Sbjct: 452 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 511
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ + A L RM+ +G+ PD ++N +I AYCKEGK+ + LL +M +
Sbjct: 512 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 571
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ +G+L +A+ ++++ G+ + ++ L+ A+ + L +
Sbjct: 572 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 631
Query: 440 RIGQD 444
I +D
Sbjct: 632 YIVED 636
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 192/398 (48%), Gaps = 1/398 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK+ + + +G +P + + ++N L LN + V M +IG+ P
Sbjct: 82 VKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTV 141
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA-FYLYR 299
TF L + C G+V + F + +E+ G + TY +I+ CK G + A YL +
Sbjct: 142 VTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEK 201
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
I R L ++ Y+T+M+ LCK+G V EA LF M +G+ PD+V+YN+LI C G
Sbjct: 202 IKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFG 261
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ +E+ +LL MM GI P+ T ++V + K+G + A ++ + GV Y+
Sbjct: 262 RWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYN 321
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C ++ A + E + G++P+L Y+ L+ CK ++ AL L EMV+
Sbjct: 322 SVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNS 381
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P + T+ LI FC G+ A L M E P+ Q C ++++G + ++A
Sbjct: 382 GLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEA 441
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+L K + YN V + G L+ EL
Sbjct: 442 ISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQEL 479
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 10/372 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E+ F G QP +V+ N L++GL + + M R GI PN
Sbjct: 224 KDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQ 283
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN+L FCK+G + + + + G +PD+VTYN++IS +C ++ DA ++ +M
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM 343
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ LP+LVTY++L++G CK + +A L MV+ GL+PD+V+++TLI +CK GK
Sbjct: 344 IHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKP 403
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ +K L M + +P+ TC II+ G K A++L E+++ + ++ IY+ +
Sbjct: 404 EAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIV 463
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ +C + A L + G + Y +++ LCK + DA L +M +
Sbjct: 464 LDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGC 523
Query: 482 KPSLSTYRALICCFC---GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P+ TY + I RS + + LM G+ D+ +LI+ + NK
Sbjct: 524 LPNEFTYNVFVRGLLQRYDISRSTKYLLLMK---GKGLSADATTTELLISYF----SANK 576
Query: 539 AEALLGFFAKKF 550
+ L F ++F
Sbjct: 577 ENSALHVFLQEF 588
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 186/421 (44%), Gaps = 36/421 (8%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F +G P++V+ L+NGL + + + + + +G N++T+ + +
Sbjct: 125 GFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIIN 184
Query: 249 VFCKNGDVDKVNGFLEKIE------------------------------------EEGFD 272
CK GD +LEKI+ +G
Sbjct: 185 GLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQ 244
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PDLV YN+LI C GR +A L M R+ ++P++ T+ L++ CK+G + A +
Sbjct: 245 PDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTI 304
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
MVH G+ PD+V+YN++I +C +M ++ + M+ G P+ T ++ G+ K
Sbjct: 305 MGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCK 364
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ AL L+ E+ G++ + LI C+ +P AA L + + P+L+
Sbjct: 365 TKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQT 424
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+++ L KC ++A+ L EM N++ ++ Y ++ C G+ +A L +
Sbjct: 425 CAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLP 484
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ D +I G C E ++ AE LL + + + +YN + D+S
Sbjct: 485 SKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDIS 544
Query: 573 K 573
+
Sbjct: 545 R 545
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 171/393 (43%), Gaps = 1/393 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L+ + L + + +M + P F L + K ++ I G
Sbjct: 42 FLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLG 101
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD+ T +I+ C F + +M++ V P +VT+ TL+NGLC EG V A
Sbjct: 102 IKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAA 161
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC-QIIVQG 389
+ + G + +Y +I CK G + L ++ G D I+
Sbjct: 162 RFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDS 221
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K+G + ALNL + G+ Y+ LI LC R AT+LL + + G +P+
Sbjct: 222 LCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPN 281
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
++ +N L+++ CK ++ A + MV ++P + TY ++I C + + G+AV + +
Sbjct: 282 VQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFE 341
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M+ G LP+ LI+G+C K++NKA LLG D +++ + F + G
Sbjct: 342 LMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAG 401
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL PN TC ++ L+K
Sbjct: 402 KPEAAKELFCTMHEHDQHPNLQTCAIILDGLFK 434
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 235/517 (45%), Gaps = 50/517 (9%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR L FF+WV N ++ L++ L + A L + C
Sbjct: 75 LRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGC 133
Query: 160 PHSVD-VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
D F LI +Y GL +ES K F+ +G PS+++ N LL+ LLK
Sbjct: 134 VKLQDRYFNSLIR-------SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 219 NCIDQCWQVYEEMGRI-GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+++EM R G+ P+++TFN L + FCKN VD+ + +E +PD+VT
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
YNT+I C+ G++ A + M ++ +V P++V+YTTL+ G C + ++ EA +FH
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY----PDTFTCQIIVQGYG 391
M+ RGL P+ V+YNTLI + + E K +L + GN + PD T I+++ +
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHC 364
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G L +A+ + E+ + Y LI LC N A +L
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL-------------- 410
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+NEL E + LL KDE KP + Y + C G++ +A + ++
Sbjct: 411 -FNELFEK--------EVLLGKDE-----CKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
++ G + D + LI G+C E A LL ++ + D E+Y + + + G+
Sbjct: 457 MKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ +R LR + P T ++ L K RKF
Sbjct: 516 LLAHDTLQRMLRSSYLPVATTFHSVLAELAK---RKF 549
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 197/484 (40%), Gaps = 70/484 (14%)
Query: 48 LYNFLPETQNPNKIVDLICSSLKKGDSH--LTLLQNDLKPLLPHLGAHE-ISRVLLRCQS 104
LY+ P+ N I+D +C + K +H L+ + + P++ ++ + R Q
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
+ L F + + L KP + Y ++ L+ +++ +L +
Sbjct: 297 IDEAVLVFHDMLSRGL--KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
F LI A+ G + + K F++ L++ P S + L+ L N D+
Sbjct: 355 TFNILIK-------AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 225 WQVYEEM-------GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
++ E+ G+ P +N + C NG + ++ + G D +
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPS 466
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y TLI+ +C++G+ A+ L +M RR +PDL TY L++GL K G+ AH RM+
Sbjct: 467 YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML 526
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
P ++++++ K ES L+ M+ E R+
Sbjct: 527 RSSYLPVATTFHSVLAELAKRKFANESFCLVTLML--------------------EKRIR 566
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
++L ++ R S ++ +LIV L DN GY+ +E EL+
Sbjct: 567 QNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDN---------------GYLVKME---ELL 608
Query: 458 ESLCKCDSVADALLL------KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
LC+ + DA L K +MVD + T +I C R EA SL +E+
Sbjct: 609 GYLCENRKLLDAHTLVLFCLEKSQMVD------IDTCNTVIEGLCKHKRHSEAFSLYNEL 662
Query: 512 LESG 515
+E G
Sbjct: 663 VELG 666
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 195/406 (48%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V PD+ TY+ L+NGLCKE K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + D T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 150/272 (55%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+ P
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQP 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK GR++ A +Y
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ DL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCKKGDVWTGSKLLKEMQRDGYMPSV 416
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
++P Y ++++ L +K A ++ E+++ LV P+ V F LI
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLV---PNGV-TFTTLID-------G 250
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + + + +++ L +++ N L+ GL K + Q + +EM G+ P+
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK GD++ + +++ +E D V Y LIS C++GR DA + R
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLR 370
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
M + P++ TYT ++N CK+G V +L M G P +V+
Sbjct: 371 EMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 131/327 (40%), Gaps = 35/327 (10%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+ ++ LI++Y + G L DA YR+ T ++ L K + +
Sbjct: 65 DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ G + +N L+ ++ KEG+++ ++S+ + + P + ++ GY K
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G L L +Q GV P + Y
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+ L+ LCK + DA L DEM+D + P+ T+ LI C GR A+ + +ML
Sbjct: 210 SVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ D LI G C + D+ +A+ L+ + K D +Y + + ++GDL
Sbjct: 270 QSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLET 329
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSL 600
E +KR ++ +++ +I L
Sbjct: 330 AFEYRKRMIKENIRLDDVAYTALISGL 356
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 20/307 (6%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR------------------GLSPDIVSYNTL 351
L +Y T+++ LC + EA L +V R DI ++ L
Sbjct: 13 LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTF-TCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I AY + G ++++ Y + + F TC+ +++ K E G
Sbjct: 73 ITAYLESGFLRDAIEC-YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S ++ L+ + ++ A S+ + I + PS+ +N LM K + +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK+ M ++P + TY LI C + +A L DEML++G++P+ LI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V+ A + + D +YN + + GDL + +L G P+
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311
Query: 591 LTCKYMI 597
+T +I
Sbjct: 312 ITYTTLI 318
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM S K + A + D + +++PS+ ++ L+ + +G E
Sbjct: 131 GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEG 190
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L + M SG+ PD VLING C E ++ A L + + ++ + +
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDG 250
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G + ME+ K+ L + + +T +I+ L K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCK 288
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 188/400 (47%), Gaps = 6/400 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +L L + ++ +M R PN T+N + FC G V + ++ E
Sbjct: 158 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 213
Query: 269 EG-FDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G P+ TY T+IS +CK GR+++A ++ ++ + V P+ V Y L+ G C +GK+
Sbjct: 214 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 273
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A RMV RG++ + +YN L+ A +G+ E+ L+ EM G G+ D FT I+
Sbjct: 274 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNIL 333
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ KEG + AL + + R GV + Y LI AL + + L + + G
Sbjct: 334 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGI 393
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P L +YN L+ S ++ A + EM + I P TY L+ C +GR EA
Sbjct: 394 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 453
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+DEM + G+ PD LI+GY M+ DV A + K +YNA+
Sbjct: 454 LIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 513
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
++G + K + G P++ T +I L ER
Sbjct: 514 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDER 553
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 175/337 (51%), Gaps = 1/337 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDK 258
G P+ + +++G K+ +D+ +V++EM G + P +N L +C G +D
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+ +++ E G + TYN L+ + GR +A+ L M + + D+ TY L+N
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CKEG V++A ++F M RG+ +V+Y +LI+A K+G++QE+ L E + GI P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++ + G + A ++ E+++ ++ Y+ L+ LC R A L+
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G P L YN L+ V DAL +++EM+++ P+L TY ALI C
Sbjct: 456 DEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKN 515
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G+ +A +++ EM+E+G+ PD LI G E +
Sbjct: 516 GQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 9/321 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + E+KP + Y ++ K A+ +VE + +V +
Sbjct: 240 AVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE--RGVAMTVATYNL 297
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ A G E+++ + G + + N L+NG K + + +++
Sbjct: 298 LV-------HALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIF 350
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M R G+ T+ L + K G V + + ++ G PDLV YN LI+S+
Sbjct: 351 ENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 410
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G ++ AF + M ++ + PD VTY TLM GLC G+V EA +L M RG+ PD+V+Y
Sbjct: 411 GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTY 470
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NTLI Y +G ++++ + EMM G P T ++QG K G+ A N+V E+
Sbjct: 471 NTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVE 530
Query: 409 FGVSISRDIYDYLIVALCQDN 429
G++ Y LI L ++
Sbjct: 531 NGITPDDSTYISLIEGLTTED 551
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+AL ++ I P Y ++ + A+K+ E++ + P +V ++
Sbjct: 203 AALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAV-MYN 261
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI Y G + + + ++ G ++ + N L++ L + +++
Sbjct: 262 ALIG-------GYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYEL 314
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EEMG G+ + T+NIL + CK G+V K E + G +VTY +LI + K
Sbjct: 315 VEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSK 374
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
KG++ + L+ RR + PDLV Y L+N G + A ++ M + ++PD V+
Sbjct: 375 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVT 434
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTL+ C G++ E++ L+ EM GI PD T ++ GY +G + AL + E+
Sbjct: 435 YNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM 494
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + + Y+ LI LC++ + A ++++ + ++G P Y L+E L D A
Sbjct: 495 NKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDERA 554
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 6/324 (1%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T+N ++ C G+ A L R M R P+ VTY T++ G C G+V+ A +
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMRE 210
Query: 336 MVHR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKE 393
M R G++P+ +Y T+I +CK G++ E+ + EM+ G + P+ ++ GY +
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+L +AL + GV+++ Y+ L+ AL D R A L+E +G G + Y
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ CK +V AL + + M R ++ ++ TY +LI G+ E L DE +
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD + LIN + ++++A ++G KK D +YN + G + +
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+L + G P+ +T +I
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLI 474
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N ++ LC A AL E++ + +P+ TY +I FC GR A+ +M EM
Sbjct: 157 FNIMLRHLCSAGKPARAL----ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 212
Query: 513 E-SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDGD 570
E G+ P+ +I+G+C V++A + K ++ + YNA+ + + G
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + + R + G A T ++H+L+
Sbjct: 273 LDTALLYRDRMVERGVAMTVATYNLLVHALF 303
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 185/367 (50%), Gaps = 1/367 (0%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S D D+ +CT N K G + E+ + F + +G P+ V+ L++G
Sbjct: 31 SGDAALDVTACTALVN-GCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR 89
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
++ + ++EEM R G+ PN +T+N L +C+ G+ ++ +++ G ++V+YNTL
Sbjct: 90 EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ C+ G+L DA L +M P ++T+ L++G K GK+ A F++M G
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P V+YN LI +C+ M + L +M G+ P T I++ + +E + A
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
++ +++ G+ + Y L+ ALC + A L + +G+ G PS IY+ ++
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+ S AL L EM + + P+ ++Y I C + EA +L+D+M+ +G+
Sbjct: 330 REGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSES 389
Query: 522 ICRVLIN 528
IC+ L++
Sbjct: 390 ICQALLD 396
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 171/339 (50%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ +C L+NG K + + +V++EM +G+ PN T+ L H + +G +K E
Sbjct: 38 VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ G +P+L TYN LI +C+ G A L+ M R ++ ++V+Y TL+ GLC+ G
Sbjct: 98 EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ +A +L M G P I+++N L+ Y K GKM + +M G P T
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ G+ + + A + +++ G+ ++ Y LI + ++N A +L + +
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G Y L+ +LC ++ DA L M ++ ++PS Y +I + G S +A
Sbjct: 278 GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKA 337
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ L+ EM + G++P+S + I C + +AEALL
Sbjct: 338 LKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALL 376
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 157/349 (44%)
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK GDV + +++ G P+ VTY L+ Y G+ F L+ M R V P+L
Sbjct: 49 CKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNL 108
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
TY L+ C+ G+ A LF M RG+ ++VSYNTLI C+ GK+ ++ LL
Sbjct: 109 YTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDM 168
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M G P T ++V GYGK G++ +AL +++ G S Y+ LI C+
Sbjct: 169 MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARD 228
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A L + + G P+ Y L++S + + + A + M ++ TY
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ C G +A L M E G+ P + I ++I GY E KA L+ +K
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
I ++ SY + +D + L +R G + C+ ++ +
Sbjct: 349 LIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDA 397
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G ++VS N L+ GL + + ++ + M G P+ TFN+L + K G +
Sbjct: 138 GIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNA 197
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +++ GF P VTYN LI+ +C+ + A M R + P VTYT L++
Sbjct: 198 LPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+E + +A ++ M GL D +Y L+ A C EG M++++ L M G+ P
Sbjct: 258 FARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS 317
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+++ GYG+EG AL L++E+++ G+ + Y I LC+D++ A +LL+
Sbjct: 318 NVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLD 377
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ + G S I L+++ + A+
Sbjct: 378 DMVRAGLQTSESICQALLDAKARLRGSAN 406
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 159/358 (44%), Gaps = 9/358 (2%)
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDP-DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C GDV L + + G D+ L++ CK G + +A ++ M + P
Sbjct: 12 LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ VTYT LM+G G+ + LF M G+ P++ +YN LI +C+ G+ + ++SL
Sbjct: 72 NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM GI + + ++ G + G+L A L+ ++ G S ++ L+ +
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A ++ G+ PS YN L+ C+ + A +M +R ++P+ TY
Sbjct: 192 GKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY 251
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
LI F G+A ++ M ++G+ D+ VL+ CME ++ A L +
Sbjct: 252 TILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE 311
Query: 549 KFQIYDTESYNAVFNM----FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K E N +++M + +G K ++L + G PN+ + I L K
Sbjct: 312 K----GVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCK 365
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 193/410 (47%), Gaps = 4/410 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ SCN LL LL + + + G P+T +N GD+D+
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 263 LEKI--EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L ++ E PD +YN +I+ + G+ +DA ++ M R V P+ +TY T+++G
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K G + +L +M+ G P++V+YN L+ C+ G+M E+++L+ EM + PD
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT I+ G + G + L+L E + GV I L+ LC+D + A +LE
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G VP+ IYN L+ C+ + A + ++M R+I+P TY ALI C +
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
EA L+ EM +SG+ P + LI+ Y + K +L K + S+ +
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK--GMERKF 608
V F ++G + + + + + PN +I + + G E+ F
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 207/419 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++ K F + +D G P+ ++ N +++G +K ++ +++ ++M + G PN
Sbjct: 207 RSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVV 266
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L C+ G +D+ ++++ PD TY+ L + G L+
Sbjct: 267 TYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGES 326
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ V+ T + L+NGLCK+GKV +A Q+ +VH GL P YNTLI YC+ +
Sbjct: 327 LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDL 386
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q + S+ +M I PD T ++ G K + A +LV+E+++ GV S + ++ L
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTL 446
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A + + ++L + G ++ + ++++ CK + +A+ + D+M+ +++
Sbjct: 447 IDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDV 506
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ Y ++I + G + +A L+++M SG+ +L+ G C +++AE
Sbjct: 507 VPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEE 566
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L+ + D SYN + + GD + +EL + + P T ++ +L
Sbjct: 567 LIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 229/499 (45%), Gaps = 50/499 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y +++ L + K S A+K+ E+V+ P+ + + +I +VK
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR-GVAPNQI-TYNTMID-------GHVKG 243
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F+ + L G +P++V+ N LL+GL + +D+ + +EM + P+ T+
Sbjct: 244 GDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTY 303
Query: 244 -----------------------------------NILTHVFCKNGDVDKVNGFLEKIEE 268
+IL + CK+G V K LE +
Sbjct: 304 SILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 363
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P YNTLI+ YC+ L AF ++ M R++ PD +TY L+NGLCK + E
Sbjct: 364 TGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITE 423
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L M G+ P + ++NTLI AY + G++++ ++L +M GI + + +V+
Sbjct: 424 AEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVK 483
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ K G++ A+ ++ ++ V + +Y+ +I A + A L+E++ G
Sbjct: 484 AFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSA 543
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S+ YN L++ LCK + +A L + ++ ++P + +Y +I C G + A+ L+
Sbjct: 544 SIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELL 603
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM + + P + L++ V+ E L K + E ++++ E+
Sbjct: 604 QEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK----NVEPSSSIYGTRCEN 659
Query: 569 GDLSKLMELQKRFLRLGFA 587
SK+ L+K G A
Sbjct: 660 E--SKVASLKKEMSEKGIA 676
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 8/304 (2%)
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R+ LP L + L+ L G+ + F +V G PD ++N + A G + E
Sbjct: 117 RSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDE 176
Query: 364 SKSLLYEM--MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ ++L M PD F+ +++ G + G+ AL + E+ GV+ ++ Y+ +
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + A L +++ QDG P++ YN L+ LC+ + + L DEM ++
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296
Query: 482 KPSLSTYRALICCFCGIGRSGEA---VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
P TY L F G+ R+G++ +SL E L+ G++ + C +L+NG C + V K
Sbjct: 297 LPDGFTYSIL---FDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAK 353
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
AE +L + T YN + N + + DL + ++ P+++T +I+
Sbjct: 354 AEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALIN 413
Query: 599 SLWK 602
L K
Sbjct: 414 GLCK 417
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 102 CQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
CQ D A + F +K+ I+P Y +++ L M+M+ E +LV +
Sbjct: 381 CQVRDLQGAFSIFEQMKSR-HIRPDHITYNALINGLC-------KMEMITEAEDLVMEME 432
Query: 161 HS-----VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
S V+ F LI AY + G + + F D G + +++S ++
Sbjct: 433 KSGVDPSVETFNTLID-------AYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAF 485
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K I + + ++M + PN +N + + ++G ++ +EK++ G +
Sbjct: 486 CKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASI 545
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
TYN L+ CK ++++A L + + + PD+V+Y T+++ C +G A +L
Sbjct: 546 FTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQE 605
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
M + P + +Y+ L+ A G++ + + L M+ + P +
Sbjct: 606 MHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSS 650
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 200/412 (48%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ +F + + + +PS V L + K + +M G+ N +T NI
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + C+ + L K+ + G PD VT+ TLI+ C +GR+ +A L+ M R+
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+P+ VT+T L++ LCK+G V EA +F M +G+ P+I +YN L+ YC +M ++
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ M+G G P + I++ GY K R+ A L+ ++ + + Y+ L+ L
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C + A L +++ G +P+L Y+ L++ LCK + +AL L M +R ++P +
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y LI G+ A L ++ +G+ P + ++I G E ++A L
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ D+ SYN + F ++ D S ++L + F+ ++ T K ++
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 170/347 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++ I + K +G QP V+ L+NGL I + +++ EM PNT
Sbjct: 133 RLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTV 192
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF IL V CK G V + E + E+G +P++ TYN L++ YC + +NDA ++ IM
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P + +Y+ L+NG CK ++ EA L +M + L P+ V+YNTL+ C +
Sbjct: 253 VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL 312
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ L +M +G+ P+ T I++ G K G L AL L+ +Q + +Y+ L
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNIL 372
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + + A L ++ +G PS+ YN +++ L K +A L +M D
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P +Y +I F A+ L+DEM+ DS ++L++
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 182/369 (49%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+ N L+N L +L+ I V +M ++GI P++ TF L + C G + + ++
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
P+ VT+ L+ CKKG +++A ++ M + V P++ TY LMNG C ++
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A ++F MV +G +P + SY+ LI YCK ++ E+K+LL +M + P+T T +
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+QG LL A L ++ G+ + Y L+ LC+ A LL + +
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + +YN L++ + + A L ++ I+PS+ TY +I G S EA
Sbjct: 363 EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L +M + G LPDS V+I G+ +D + A L+ + D+ ++ + ++ +
Sbjct: 423 LFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLES 482
Query: 567 EDGDLSKLM 575
D +S+ M
Sbjct: 483 HDEIISRFM 491
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 141/330 (42%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P V + S KK + + L M V + T L+N LC+ + A +
Sbjct: 84 PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M G+ PD V++ TLI C EG+++E+ L EM G P+T T I+V K
Sbjct: 144 LSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCK 203
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+G + A + + GV + Y+ L+ C A+ + E + G PS+
Sbjct: 204 KGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHS 263
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ CK + +A L +M ++ + P+ TY L+ C EA L +M
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMC 323
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
SGMLP+ + +L++G C + +A LL ++ D YN + G L
Sbjct: 324 SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLE 383
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL + G P+ T MI L K
Sbjct: 384 VAKELFSKLFANGIRPSVRTYNIMIKGLLK 413
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 129/277 (46%)
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ +A F+RM+H P V + + K+ + SL +M G+ + +T I
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ + + A++++ ++ + G+ + LI LC + R A L +
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+P+ + L++ LCK V++A + + M ++ ++P++ TY AL+ +C +A
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ + M+ G P +LINGYC + +++A+ALL ++K I +T +YN +
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + EL K+ G PN T ++ L K
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCK 343
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 193/397 (48%), Gaps = 8/397 (2%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K L +G++P V+ L+NG + N + + ++M IG P+ +N + CK
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V+ F ++IE +G P++VTY L++ C R +DA L M ++ + P+++TY+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ K GKV EA +LF MV + PDIV+Y++LI C ++ E+ + M+
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G D + ++ G+ K R+ + L E+ + G+ + Y+ LI Q A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
++ G P + YN L+ LC + AL++ ++M R + + TY +I
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G+ EA SL + G+ PD +++G C + +++ EAL ++ + +
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ + DGD++ EL K+ L G+AP+ L
Sbjct: 505 DCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 184/398 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ ++KL D + ++M +GI + +TFNI+ + FC V
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD VT +L++ +C++ R++DA L M PD+V Y +++ LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V +A F + +G+ P++V+Y L+ C + ++ LL +M+ I P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ + K G++L A L E+ R + Y LI LC +R A + + +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G + + YN L+ CK V D + L EM R + + TY LI F G
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A +M G+ PD +L+ G C ++ KA + K+ D +Y V
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G + + L G P+ +T M+ L
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 145/280 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + ++F F++ G +P++V+ L+NGL + ++ +M + I PN
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F KNG V + E++ DPD+VTY++LI+ C R+++A ++ +M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ L D+V+Y TL+NG CK +V + +LF M RGL + V+YNTLI + + G +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +M GI PD +T I++ G G L AL + ++Q+ + + Y +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
I +C+ + A SL + G P + Y +M LC
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 164/337 (48%), Gaps = 18/337 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSD--SV 107
+ P+ N I+D +C + + D+ + + K + P++ + + V C S S
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT-ALVNGLCNSSRWSD 243
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+A + +K +I P Y ++ N K A ++ E+V + D P V +
Sbjct: 244 AARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIV-TYS 299
Query: 168 DLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
LI+ C D I E+ + F + G +VS N L+NG K ++
Sbjct: 300 SLINGLCLHD---------RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+++ EM + G+ NT T+N L F + GDVDK F +++ G PD+ TYN L+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C G L A ++ M +R + D+VTYTT++ G+CK GKV EA LF + +GL PDI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
V+Y T++ C +G + E ++L +M G+ + T
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 21/362 (5%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V+ A FF ++ I+P Y +V+ L ++++S A ++L ++++ K
Sbjct: 201 CKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK--KKIT 257
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + L+ A+VK G + E+ + F + + + P IV+ + L+NGL +
Sbjct: 258 PNVITYSALLD-------AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID+ Q+++ M G + ++N L + FCK V+ ++ + G + VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI + + G ++ A + M + PD+ TY L+ GLC G++ +A +F M R
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ DIV+Y T+I CK GK++E+ SL + G+ PD T ++ G +G L
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L ++++ G+ + D D + L++++ GY PSL ++ +
Sbjct: 491 ALYTKMKQEGL-MKND-------CTLSDGDITLSAELIKKMLSCGYAPSL--LKDIKSGV 540
Query: 461 CK 462
CK
Sbjct: 541 CK 542
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 148/314 (47%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+LNDA L+ M + P +V + L++ + K K L +M G+ D+ ++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I +C ++ + S+L +M+ G PD T +V G+ + R+ A++LV ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G Y+ +I +LC+ R A + I + G P++ Y L+ LC +DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +M+ + I P++ TY AL+ F G+ EA L +EM+ + PD LING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C+ +++A + K + D SYN + N F + + M+L + + G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 590 NLTCKYMIHSLWKG 603
+T +I ++
Sbjct: 365 TVTYNTLIQGFFQA 378
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 216/458 (47%), Gaps = 36/458 (7%)
Query: 179 AYVKVGLIRESFKTFRK-TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A V G + E+ R+ D P+ S N ++ G+ + +V++EM +
Sbjct: 36 ACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVL 95
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+N + K GD++ +++ G P+ +TYN L+S C+ GR+ + L
Sbjct: 96 PNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSAL 155
Query: 298 YRIMYRRNVLPDLVTYTTL-----------------------------------MNGLCK 322
M + ++PD TY+ L +NGLCK
Sbjct: 156 LDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 215
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+GKV A ++ +V+ GL P V YNTLI YC+ G+++ + S +M I PD T
Sbjct: 216 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 275
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G K R+ +A +L++E+Q GV+ + + ++ LI A + + +L +
Sbjct: 276 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 335
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G P++ Y ++ + CK + +A+ + D+M +++ P+ Y A+I + G +
Sbjct: 336 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 395
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A L+++M +G+ P +LI G C + +++AE ++ + I D SYN +
Sbjct: 396 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLI 455
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ K ++LQ+R + G T +I L
Sbjct: 456 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL 493
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 176/376 (46%), Gaps = 1/376 (0%)
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF-DP 273
LL L + + + G P+T +N GD+ + G L ++ +G P
Sbjct: 2 LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+ +YN +I+ + GR DA ++ M R VLP+ +TY T+++G K G + +L
Sbjct: 62 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+MV GL P+ ++YN L+ C+ G+M E+ +LL EM + PD FT I+ G +
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + L+L + + GV+I L+ LC+D + A +L+ + G VP+ IY
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ C+ + A +M R+IKP TY ALI C R A L+ EM +
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+G+ P + LI+ Y + K +L + + SY ++ N F ++G + +
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 361
Query: 574 LMELQKRFLRLGFAPN 589
+ + PN
Sbjct: 362 AVAILDDMFHKDVLPN 377
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 205/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G + F+ + + G +P+ ++ N LL+GL + + + + +EM + P
Sbjct: 107 GHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 166
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++IL +NGD + K + G T + L++ CK G+++ A +
Sbjct: 167 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 226
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++P V Y TL+NG C+ G++ A F +M R + PD ++YN LI CK
Sbjct: 227 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 286
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ LL EM NG+ P T ++ YG+ G+L ++ E+Q G+ + Y
Sbjct: 287 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 346
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ A C++ + A ++L+ + +P+ ++YN ++++ + A +L ++M
Sbjct: 347 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 406
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I PS+ TY LI C + EA +++ + ++PD+ LI+ C +++K
Sbjct: 407 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 466
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K +Y+ + + G L+++ L ++ ++ P+N M+
Sbjct: 467 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 526
Query: 599 SLWK 602
+ K
Sbjct: 527 AYSK 530
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 174/362 (48%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F K L G +C+ LLNGL K + +V + + G+ P +N L + +C+
Sbjct: 191 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 250
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G+++ +++ PD +TYN LI+ CK R+ +A L M V P + T
Sbjct: 251 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 310
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ TL++ + G++ + + M GL P++VSY +++ A+CK GK+ E+ ++L +M
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ P+ I+ Y + G A LV +++ G+S S Y+ LI LC ++
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A ++ + +P YN L+ + C ++ AL L+ M IK ++ TY LI
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 490
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G GR E L +M+++ ++P + I +++ Y + KAE L +K
Sbjct: 491 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 550
Query: 553 YD 554
+D
Sbjct: 551 HD 552
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 208/432 (48%), Gaps = 12/432 (2%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ P N ++ +C + + G++ L + + ++P + I L DS +
Sbjct: 127 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186
Query: 109 ALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
L+ F ++KN + I + + ++++ L + K S A ++L LV P V ++
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCS--ILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRV-IYN 242
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y + G + +F TF + +P ++ N L+NGL K I +
Sbjct: 243 TLIN-------GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 295
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM G+ P TFN L + + G ++K L +++E G P++V+Y ++++++CK
Sbjct: 296 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 355
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +A + M+ ++VLP+ Y +++ + G +A L +M G+SP IV+
Sbjct: 356 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 415
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN LI C + ++ E++ ++ + + + PD + ++ G + AL+L +
Sbjct: 416 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 475
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
++G+ + Y LI L R L +++ Q+ VPS I+N ++E+ K +
Sbjct: 476 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 535
Query: 468 DALLLKDEMVDR 479
A L+ EM+ +
Sbjct: 536 KAEDLRKEMLQK 547
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 1/226 (0%)
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI-YDYLIVALCQDNRPFA 433
G PDTF VQ G L A+ ++ + R G Y+ +I + + R
Sbjct: 22 GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 81
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + + + + +P+ YN +++ K + L+D+MV +KP+ TY L+
Sbjct: 82 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 141
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C GR GE +L+DEM M+PD +L +G D +L G + K
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 201
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + + N +DG +S E+ + + G P + +I+
Sbjct: 202 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 247
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 215/424 (50%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G ++E+ + + G PS + N +L+ + + ++ ++ EM + G+ P+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+F ++ C G V + +L + E GF D T +I ++C+KG +N +
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + P+++ +T L+NGLCK+G +++A +L MV RG P++ ++ TLI CK+G
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343
Query: 360 KMQESKSLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ L +++ +G P+ T ++ GY KE +L A L+ +Q G+ + + Y
Sbjct: 344 WTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY 403
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L++ +G++G+ P++ YN +++ LCK S+ +A L +++
Sbjct: 404 TTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ TY L+ C + ++ ++ML+ G PD LI+ +C +K + +
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKE 523
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+E L I ++Y ++ + G+ S ++L +R G AP+++T +I
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALIS 583
Query: 599 SLWK 602
L K
Sbjct: 584 GLCK 587
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 1/361 (0%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G + E+ + ++ GF +C +++ + +++ + +M +G+ PN
Sbjct: 237 MGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN 296
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F L + CK G + + LE++ G+ P++ T+ TLI CKKG AF L+ +
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356
Query: 303 RRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P++ TYT ++NG CKE K+ A L RM +GL P+ +Y TLI +CK G
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ M G P+ +T I+ G K+G L A L+ ++ G+ Y L
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C+ + ++ + G+ P + Y L+ + C+ + ++ L +E V +
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGL 536
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ TY ++IC +C G + AV L M G PDS LI+G C E ++ A
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596
Query: 542 L 542
L
Sbjct: 597 L 597
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 207/461 (44%), Gaps = 35/461 (7%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
CQ V+ + + W ++ + P N+ +++ L A ++L E+V +
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR--RGWKP 327
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNC 220
+V LI K G ++F+ F K + G++P++ + ++NG K +
Sbjct: 328 NVYTHTTLID-------GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+++ + M G+ PNT+T+ L CK G+ + ++ + +EGF P++ TYN
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+I CKKG L++A+ L + + D VTYT LM+ C++ + F++M+ G
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+PDI SY TLI +C++ +M+ES+ L E + G+ P T ++ GY + G A+
Sbjct: 501 FTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L + G + Y LI LC++++ A +L + + G P L
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEY 620
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK D + A+ + D + R + T L+ C G+ A ++L+
Sbjct: 621 CKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDK------ 671
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
E +VN+ LLGF K Y++ Y V
Sbjct: 672 ------------EPNVNRV-TLLGFMNK---CYESNKYGLV 696
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ ++ + G+L +A + M + ++P T +++ G V A +F M RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+SPD VS+ ++ A C G++ E++ L M+ G D TC +I+ + ++G + +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ G++ + + LI LC+ A LLE + + G+ P++ + L++ L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Query: 461 CKCDSVADALLLKDEMVDRN-IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK A L ++V + KP++ TY A+I +C + A L+ M E G++P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ LI+G+C + +A L+ K+ + +YNA+ + + G L + L
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459
Query: 580 RFLRLGFAPNNLT 592
+ G + +T
Sbjct: 460 KVSVHGLQADGVT 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 71/290 (24%)
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFG--------------------VSISRDI------ 417
Q +V + + G+L A+N+VVE+Q G V I+ ++
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217
Query: 418 ---------YDYLIVALCQDNRPFAA-------------------TSLLERIGQDGYV-- 447
+ ++VA C R A T +++ Q GYV
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277
Query: 448 --------------PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
P++ + L+ LCK S+ A L +EMV R KP++ T+ LI
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337
Query: 494 CFCGIGRSGEAVSLMDEMLES-GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G + +A L +++ S G P+ +INGYC E +N+AE LL ++ +
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+T +Y + + + G+ + EL + GF+PN T +I L K
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 25/292 (8%)
Query: 51 FLPETQNPNKIVDLICSSLKKG--DSHLTLLQNDLKPLLPHLGAHEISRVLL---RC-QS 104
F P N I+D +C KKG D LL K + L A ++ +L C Q+
Sbjct: 431 FSPNIYTYNAIIDGLC---KKGSLDEAYRLLN---KVSVHGLQADGVTYTILMSVHCRQA 484
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D+ +L FFN + + P +Y ++ + + ++ E V L +
Sbjct: 485 DTNRSLVFFNKMLK-VGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSL--GLIPTKK 541
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ +I Y + G + K F++ + G P ++ L++GL K + +D
Sbjct: 542 TYTSMIC-------GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+Y+ M G+ P T L + +CK D L+++E+ + + T NTL+
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRK 651
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
C +G+L+ A + + + + VT MN + K +L R+
Sbjct: 652 LCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERI 703
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 449 SLEIYNELME----SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+LE NE+M+ + + + +A+ + EM ++ + PS T ++ G+G A
Sbjct: 149 NLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIA 208
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++ EM + G+ PD ++++ C V +AE L ++ I D + + +
Sbjct: 209 ENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDA 268
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + G +++++ + + +G APN + +I+ L K
Sbjct: 269 FCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 1/380 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + G R+ F + +++G P++V+ ++GL K + Q + V EEM G+ P
Sbjct: 225 AFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKP 284
Query: 239 NTHTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +T L CK G ++ FL+ ++ + P++ TY +I YCK+G+L A L
Sbjct: 285 NVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 344
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + + P+ TYTTL++G C+ G A +L ++M G P+I +YN +I +CK
Sbjct: 345 LGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK 404
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+GK+Q++ +L G+ PD T +++ + K+G + AL+L ++ D
Sbjct: 405 KGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDT 464
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y +I CQ + + L ++ G VP+ + Y ++ C+ AL + + MV
Sbjct: 465 YTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMV 524
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P TY ALI C R EA +L + ML+ M+P C L YC
Sbjct: 525 QHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTT 584
Query: 538 KAEALLGFFAKKFQIYDTES 557
A + L K+ Q + ++
Sbjct: 585 IAVSFLDGLDKRQQAHAADA 604
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 194/448 (43%), Gaps = 46/448 (10%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLN-GLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
+RE+ + G + + N++L GL + + Q ++ MG + P+ +F
Sbjct: 129 LREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMG---VRPDARSFR 185
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L C+ G ++ + L + EGF D T ++ ++C++GR D L+ M
Sbjct: 186 ALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEM 245
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV------------------ 346
P++V YT ++GLCK G V++A + MV +GL P++
Sbjct: 246 GNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERA 305
Query: 347 ------------------SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+Y +I YCKEGK+ ++ LL M+ G+ P+T T ++
Sbjct: 306 FRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLID 365
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ + G A L+ +++ G + Y+ +I C+ + A +L G P
Sbjct: 366 GHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCP 425
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
Y L+ CK + AL L ++M + + P + TY +I +C + ++ L
Sbjct: 426 DKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLF 485
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ---IYDTESYNAVFNMF 565
D+ L G++P Q +I GYC V K+ + L F + Q + D +Y A+ +
Sbjct: 486 DKCLSIGLVPTKQTYTSMIAGYCR---VGKSTSALKVFERMVQHGCLPDPITYGALISGL 542
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTC 593
++ L + L + L P ++TC
Sbjct: 543 CKESRLEEARALFETMLDKHMVPCDVTC 570
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 7/383 (1%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ CP +V + +I+ + G + +++ F + +D G QP++V+ +++GL
Sbjct: 197 RSCPPNVVSYATVIN-------GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC 249
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K +D+ V+++M G+ P+ T+N L H + G +V LE++ G PD
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TY +L++ C GR +A + + M R+ + P++ Y L++G +G + E H L + M
Sbjct: 310 TYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V GLSPD +N + AY K+ + E+ + +M G+ PD ++ K GR+
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRV 429
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A+ ++ GV+ + +++ L+ LC ++ A + G P + +N +
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ +LC V A L D M +P + +Y LI C +GR EA +D ML G+
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549
Query: 517 LPDSQICRVLINGYCMEKDVNKA 539
PD L++GYC ++ A
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDA 572
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 194/428 (45%), Gaps = 9/428 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP + Y +++H A S +L +VE H + F + + AY
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI--FNIIFT-------AYA 389
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K +I E+ F K G P +V+ L++ L KL +D + +M G+ PN
Sbjct: 390 KKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIF 449
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L + C +K F ++ +G PD+V +NT++ + C KG++ A L +M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R PD+++YTTL+ G C G++ EA + M+ GL PD +YNTL+ YC+ G++
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ + EM+ NGI P T I+ G R A L + + G + IY+ +
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ L ++N A L + + + + +N ++ +L K DA+ L + +
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + TY + G E L M +SG P+S++ L+ D+ +A A
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749
Query: 542 LLGFFAKK 549
L +K
Sbjct: 750 YLSKLDEK 757
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 200/463 (43%), Gaps = 43/463 (9%)
Query: 186 IRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM----GRIGICPNT 240
+RE+ K + ++G P +VS N LL G ++ ++ M GR PN
Sbjct: 145 LREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR-SCPPNV 203
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK------------ 288
++ + + F G VDK ++ + G P++VTY T+I CK
Sbjct: 204 VSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQ 263
Query: 289 -----------------------GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
G+ + + M + PD TY +L+N LC G+
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
REA F M+ +G+ P++ Y LI Y +G + E LL M+ NG+ PD I
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
I Y K+ + A+++ ++++ G+S + LI ALC+ R A ++ +G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P++ ++N L+ LC D A EM+++ I+P + + ++C C G+ +A
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+D M G PD LI G+C+ +++A L D +YN + + +
Sbjct: 504 RLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
G + + + LR G P +T ++H L+ R+F
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT--TRRF 604
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 191/415 (46%), Gaps = 2/415 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+ +G +E + + G +P + LLN L + ++ M R GI P
Sbjct: 282 GYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKP 341
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + IL H + G + +++ L + E G PD +N + ++Y KK +++A +++
Sbjct: 342 NVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIF 401
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ + PD+V + L++ LCK G+V +A F++M++ G++P+I +N+L++ C
Sbjct: 402 NKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTV 461
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K +++K +EM+ GI PD I+ +G+++ A L+ ++R G Y
Sbjct: 462 DKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISY 521
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C R A L+ + G P YN L+ C+ + DA + EM+
Sbjct: 522 TTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLR 581
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I P + TY ++ R EA L M+ SG + I +++NG V++
Sbjct: 582 NGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDE 641
Query: 539 AEALL-GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
A L +K FQ+ + ++N + + G M L G P+ T
Sbjct: 642 AFKLFQSLCSKDFQL-EITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 4/334 (1%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ- 331
PDL TY+ LI +C+ GRL F + ++ + + + L+ GLC ++REA
Sbjct: 92 PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM---MGNGIYPDTFTCQIIVQ 388
L RM G +PD+VSYNTL+ +C E + +E+ LL+ M G P+ + ++
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ EG++ A NL +E+ G+ + Y +I LC+ A + +++ G P
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ YN L+ + + + +EM +KP TY +L+ C GR EA
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D M+ G+ P+ I +LI+GY + +++ LL + D +N +F +A+
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + M + + + G +P+ + +I +L K
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCK 425
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
VG +P ++S L+ G + ID+ + + M +G+ P+ T+N L H +C+ G +D
Sbjct: 512 VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDD 571
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
G ++ G P +VTY+T++ R ++A LY M ++ Y ++N
Sbjct: 572 AYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILN 631
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GL K V EA +LF + + +I ++N +I A K G+ +++ L + G+ P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D FT +I + +EG L +L +++ G + + + + L+ L A + L
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYL 751
Query: 439 ERIGQDGYVPSLEIYNELM 457
++ + + SLE M
Sbjct: 752 SKLDEKNF--SLEASTTAM 768
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 179/437 (40%), Gaps = 22/437 (5%)
Query: 4 ISPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVD 63
+SP F I F + + A + I + + LS P+ N ++D
Sbjct: 374 LSPDHHIFNIIFTAYAKKAMIDEA-----MHIFNKMKQQGLS-------PDVVNFGALID 421
Query: 64 LICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIK 123
+C + D+ L Q + + P++ S V C D F + + I+
Sbjct: 422 ALCKLGRVDDAVLKFNQMMNEGVAPNIFVFN-SLVYGLCTVDKWEKAKEFYFEMLNQGIR 480
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + I+ L + A +++ +L+E V P D+IS T + V
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLI-DLMERVGTRP-------DVISYTTLIG-GHCLV 531
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ K+ L VG +P + N LL+G + ID + V+ EM R GI P T+
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + H + + G ++ YN +++ K +++AF L++ +
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++ ++ T+ ++ L K G+ +A LF + GL PD+ +Y + +EG ++E
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
L M +G P++ +V+ G + A + +L S+ LI
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771
Query: 424 ALCQDNRPFAATSLLER 440
L +D ATSL E+
Sbjct: 772 LLSRDEYHHHATSLPEK 788
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 58/162 (35%), Gaps = 39/162 (24%)
Query: 481 IKPSLSTYRALICCFCGIGR-------------SGEAVS--------------------- 506
+ P L TY LI CFC +GR SG V+
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 507 --LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK---KFQIYDTESYNAV 561
L+ M E G PD L+ G+C EK +A LL A + + SY V
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
N F +G + K L + G PN +T +I L K
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKA 251
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 223/537 (41%), Gaps = 105/537 (19%)
Query: 170 ISCTEDC----NWAYVKVGLIRESFKTFRKTLDVGFQ-PSIVSCNFLLNGLLKLNCIDQC 224
++CTED A+ + G + KTF + D+G + P + N LL+ LL+ N +
Sbjct: 29 VACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAV 88
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
VY+ M + G+ PN +T+N+L C+N VD L+++ +G PD V++ T++S
Sbjct: 89 VPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSG 148
Query: 285 YCKKGRLNDA------------------------FYLYRI------MYRRNVLPDLVTYT 314
CK GR+ +A F ++ + M +R + P++VTYT
Sbjct: 149 MCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYT 208
Query: 315 TLMNGLCK-----------------------------------EGKVREAHQLFHRMVHR 339
T+++ CK +GKV +A ++H MV
Sbjct: 209 TIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE 268
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G +P +SYN LI C G ++ + M N + P+ T +V G+ G L A
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+ + E++ G + +Y +I LC+ A SL++++ D P+ +N L+
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 388
Query: 460 LCKCDSVA-----------------------------------DALLLKDEMVDRNIKPS 484
LC C V DA + EM++ + S
Sbjct: 389 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 448
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
L TY +I C C + A+ L+ M+ G+ PD+ +I+ YC E V+ A LLG
Sbjct: 449 LVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLG 508
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ +Y + + G LS M + L G PN T ++ +++
Sbjct: 509 QMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 184/407 (45%), Gaps = 9/407 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E P ++Y +VH L + ++ E+V+ + +V + ++ A+
Sbjct: 164 ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQ--RGLQPNVVTYTTIVD-------AF 214
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K +R + + + +G P++++ L+ G + + ++ M G P+T
Sbjct: 215 CKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPST 274
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++N+L C GD+ F ++ P+ TY+TL+ + G L+ A ++
Sbjct: 275 ISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNE 334
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M P++V YT +++ LCK+ +A L +M+ P+ V++NTLI C G+
Sbjct: 335 MKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGR 394
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + ++ + M NG +P+ T ++ G +EG A +V+E+ G +S Y+
Sbjct: 395 VGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNT 454
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LCQ A LL R+ G P +N ++ + CK V+ A L +M N
Sbjct: 455 VINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVN 514
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ Y LI C G+ A+ + +ML G+ P+ VL+
Sbjct: 515 CPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V +++ L K DQ + ++M PNT TFN L C G V +
Sbjct: 339 GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 398
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ G P+ TYN L+ ++G DAF + M LVTY T++N
Sbjct: 399 LNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINC 458
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ + A L RM+ +G+ PD ++N +I AYCKEGK+ + LL +M +
Sbjct: 459 LCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 518
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ +G+L +A+ ++++ G+ + ++ L+ A+ + L +
Sbjct: 519 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 578
Query: 440 RIGQD 444
I +D
Sbjct: 579 YIVED 583
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 186/355 (52%), Gaps = 5/355 (1%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
FK F+ G P++ + N L+N L I + V+ + + G P+ T N L
Sbjct: 116 FKQFQSN---GVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKG 172
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C G++ + F +K+ +GF D V+Y TLI+ CK G L R + +V PD
Sbjct: 173 LCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPD 232
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+V YTT+++ LCK +V +A L+ M+ +G+SP++ +YNTLI+ +C G ++E+ SLL
Sbjct: 233 VVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLN 292
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM I PD +T I++ GKEG++ A++L E++ + + Y LI LC+++
Sbjct: 293 EMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNH 352
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A +L +++ + G P + Y L+++LCK + +A ++ + ++ TY
Sbjct: 353 HLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYN 412
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAEALL 543
+I C G G+ + L +M G +PD+ + +I EKD N KAE L
Sbjct: 413 VMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICAL-FEKDENDKAEKFL 466
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 11/351 (3%)
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+C C+ A++ +F F L G+ P ++ N L+ GL I + +
Sbjct: 134 LINCF--CHLAHITF-----AFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFH 186
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+++ G + ++ L + CK G+ V L K+E PD+V Y T+I CK
Sbjct: 187 DKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKN 246
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
R+ DA LY M + + P++ TY TL+ G C G ++EA L + M + ++PD+ ++
Sbjct: 247 KRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTF 306
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N LI A KEGK+ E+ SL EM ++P+ T ++ G K L A+ L +++
Sbjct: 307 NILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 366
Query: 409 FGVSISRDIYDYLIV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G I D+Y Y I+ ALC+ R A + + GY ++ YN ++ LCK
Sbjct: 367 QG--IQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 424
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
D + LK +M + P T++ +IC + +A + EM+ G+L
Sbjct: 425 GDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 174/368 (47%), Gaps = 1/368 (0%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P H NIL+ + KN V ++ + G P+L T N LI+ +C + AF +
Sbjct: 92 PTFHFDNILSSLV-KNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ + +R PD +T TL+ GLC G+++ A ++V +G D VSY TLI CK
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ + LL ++ G+ + PD I+ K R+ A +L E+ G+S +
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI C A SLL + P + +N L+++L K + +A+ L +EM
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+N+ P++ TY +LI C A++L +M E G+ PD +L++ C +
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A+ K + +YN + N + G +M+L+ + G P+ +T K +I
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450
Query: 598 HSLWKGME 605
+L++ E
Sbjct: 451 CALFEKDE 458
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 143/331 (43%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ ++SS K L++ V P+L T L+N C + A +
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F ++ RG PD ++ NTLI C G+++ + +++ G D + ++ G K
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + L+ +L+ V +Y +I LC++ R A L + G P++
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ C ++ +A L +EM +NI P + T+ LI G+ EA+SL +EM
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
M P+ LI+G C + +A AL ++ D SY + + + G L
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + L G+ N T MI+ L K
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKA 421
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 9/255 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y I+H L N + A + E++ VK +V + LI + +
Sbjct: 229 VKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI--VKGISPNVFTYNTLI-------YGFC 279
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+G ++E+F + P + + N L++ L K ID+ ++EEM + PN
Sbjct: 280 IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIV 339
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L CKN +++ +K++E+G PD+ +Y L+ + CK GRL +A ++ +
Sbjct: 340 TYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHL 399
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ ++ TY ++NGLCK G + L +M +G PD +++ T+I A ++ +
Sbjct: 400 LVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDEN 459
Query: 362 QESKSLLYEMMGNGI 376
+++ L EM+ G+
Sbjct: 460 DKAEKFLREMIARGL 474
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 207/427 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G + + FR+ +++ + ++ S +L+GL K ++ ++ +E+ G+
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N + K D+ V L +E+EG ++VTY LI + G++ +A L+
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + D+ YT++++ C+ G V+ A LF M +GL P +Y LI CK
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M+ ++ L+ EM G GI + ++ GY + G + AL L V +++ G+ Y
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ + LC+ NR A LL + + G P+ + L++ CK + +A + EM +
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P++ TY LI + G EA L DE+ G++PD C LI+G C++ V+
Sbjct: 503 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDM 562
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L ++ + + +Y A+ + ++DG + +L G P++ ++
Sbjct: 563 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 622
Query: 599 SLWKGME 605
SL E
Sbjct: 623 SLHSADE 629
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 193/423 (45%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + E+ + F GF SC L L + +D C + + M + +
Sbjct: 169 YADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 228
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ I+ CK GDV+ ++++ +G ++VTYN I Y K+ L +
Sbjct: 229 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 288
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + V ++VTYT L++G GK+ EA +LF M +G+ D+ Y ++I C+ G
Sbjct: 289 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 348
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + L EM G+ P T ++ G K G++ +A LV E+Q G+ ++ I++
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C+ A L + + G + YN + LCK + +A L MV+R
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 468
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ ++ LI +C G EA + EM E G +P+ VLI+GY ++ +A
Sbjct: 469 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 528
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L + I D + ++ + DG + ++L + G PN +T MI
Sbjct: 529 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 588
Query: 600 LWK 602
L K
Sbjct: 589 LSK 591
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 168/336 (50%), Gaps = 9/336 (2%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y L++H + K A ++ E+ E K V V+ +ISC +C VK L+
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMRE--KGIEADVYVYTSIISC--NCRSGNVKRALV-- 355
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F + D G PS + L++G+ K ++ + EM GI N FN L
Sbjct: 356 ---LFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 412
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+C++G VD+ +E++G + D+ YN++ S CK R ++A L M R V P
Sbjct: 413 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 472
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ +++TTL++ CKEG EA ++F M +G P+I++YN LI Y K G M+E+ L
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 532
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
E+ G+ PD +TC ++ G +G++ AL L E+ + G+ + Y +I L +D
Sbjct: 533 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 592
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
R A L + + + G P +Y+ L+ SL D
Sbjct: 593 GRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAD 628
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 172/392 (43%), Gaps = 35/392 (8%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L V+ N + E +E++GF D + + + + G+++ +R M
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE---- 358
+V + + T +++GLCK G V +L + +G+ ++V+YN I Y K
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281
Query: 359 -------------------------------GKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
GK++E++ L EM GI D + I+
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ G + AL L E+ G+ S Y LI +C+ + AA L+ + G
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ I+N L++ C+ V +AL L+ M + ++ + Y ++ C + R EA L
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M+E G+ P++ LI+ YC E + +A+ + +K + + +YN + + +++
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G++ + +L+ G P+ TC +IH
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 553
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 218/479 (45%), Gaps = 33/479 (6%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FF +N L +K S +L SF ++ C E++++ HS+
Sbjct: 2 AMRFFQLHRNRL-VKGNSGKALSFSRLL----DLSFWVRAFCNYREILRNGLHSLQ---- 52
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
E+ F ++ PSI+ LLN + K+ D +
Sbjct: 53 -----------------FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLC 95
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ + +G+ + +T N+L + FC++ + FL K+ + GF+PD+VT+ +LI+ +C
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLG 155
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
R+ +A + M + PD+V YTT+++ LCK G V A LF +M + G+ PD+V Y
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+L+ C G+ +++ SLL M I PD T ++ + KEG+ L A L E+ R
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
++ + Y LI C + A + + G P + Y L+ CKC V D
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+ + EM + + + TY LI F +G+ A + M+ G+ P+ + VL++
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 529 GYCMEKDVNKAEALLGFFAKKFQ---IYDTESYNAVFNMFAEDGDLSKLM----ELQKR 580
C V KA + K+ + +YN + + +G L K + +++KR
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 185/361 (51%), Gaps = 3/361 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + +++G +P +V +++ L K ++ ++++M GI P+ +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + C +G + L + + PD++T+N LI ++ K+G+ DA LY M R +
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P++ TYT+L+NG C EG V EA Q+F+ M +G PD+V+Y +LI +CK K+ ++
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
+ YEM G+ +T T ++QG+G+ G+ A + + GV + Y+ L+ L
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 426 CQDNRPFAATSLLERIGQ---DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C + + A + E + + DG P++ YN L+ LC + AL++ ++M R +
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +I C G+ AV+L + G+ P+ +I+G E ++A L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 543 L 543
Sbjct: 518 F 518
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 151/328 (46%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ + L++ K + + L + V DL T LMN C+ + A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M+ G PDIV++ +LI +C +M+E+ S++ +M+ GI PD I+ K
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + AL+L +++ +G+ +Y L+ LC R A SLL + + P +
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+++ K DA L +EM+ +I P++ TY +LI FC G EA + M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G PD LING+C K V+ A + ++K +T +Y + F + G +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSL 600
E+ + G PN T ++H L
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 14/348 (4%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V+ AL+ F+ ++N I+P Y +V+ L + ++ A +L + + +
Sbjct: 188 CKNGHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK--RKIK 244
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
V F LI A+VK G ++ + + + + + P+I + L+NG C
Sbjct: 245 PDVITFNALID-------AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ Q++ M G P+ + L + FCK VD ++ ++G + +TY T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR- 339
LI + + G+ N A ++ M R V P++ TY L++ LC GKV++A +F M R
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 340 --GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G++P+I +YN L+ C GK++++ + +M + T II+QG K G++
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+A+NL L GV + Y +I L ++ A L ++ +DG
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ N+A L+ M LP ++ +T L+N + K K L + G+S D+ + N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
L+ +C+ + + S L +MM G PD T ++ G+ R+ A+++V ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ +Y +I +LC++ A SL +++ G P + +Y L+ LC DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L M R IKP + T+ ALI F G+ +A L +EM+ + P+ LING
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+CME V++A + K D +Y ++ N F + + M++ + G N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 590 NLTCKYMIHSL 600
+T +I
Sbjct: 352 TITYTTLIQGF 362
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F D+++ T N + K + ++ K F + G + ++ L+ G ++ +
Sbjct: 314 FPDVVAYTSLIN-GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE---KIEEEGFDPDLVTYNTLI 282
+V+ M G+ PN T+N+L H C NG V K E K E +G P++ TYN L+
Sbjct: 373 EVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
C G+L A ++ M +R + ++TYT ++ G+CK GKV+ A LF + +G+
Sbjct: 433 HGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
P++V+Y T+I +EG E+ L +M +G+
Sbjct: 493 PNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 16/297 (5%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNW 178
+IKP + ++ KF A ++ E++ + ++ + LI+ C E C
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM--SIAPNIFTYTSLINGFCMEGC-- 297
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ E+ + F G P +V+ L+NG K +D +++ EM + G+
Sbjct: 298 -------VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+ L F + G + + G P++ TYN L+ C G++ A ++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 299 RIMYRR---NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
M +R V P++ TY L++GLC GK+ +A +F M R + I++Y +I
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
CK GK++ + +L + G+ P+ T ++ G +EG A L +++ GVS
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 121/251 (48%), Gaps = 20/251 (7%)
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSA-------LNLVVELQRFGV----------- 411
E++ NG++ F + + + E R L + LN++ ++++F V
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 412 SISRDIY--DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+S D+Y + L+ CQ ++P+ A+S L ++ + G+ P + + L+ C + + +A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ + ++MV+ IKP + Y +I C G A+SL D+M G+ PD + L+NG
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C A++LL K+ D ++NA+ + F ++G EL +R+ APN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 590 NLTCKYMIHSL 600
T +I+
Sbjct: 282 IFTYTSLINGF 292
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 63/150 (42%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y E++ + +AL L MV+ PS+ + L+ + + ++L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ D C +L+N +C A + LG K D ++ ++ N F +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ M + + + +G P+ + +I SL K
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 142/551 (25%), Positives = 242/551 (43%), Gaps = 19/551 (3%)
Query: 58 PNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS-----ALTF 112
P+ V I + L S + L + L L + +S VL +SD + A +F
Sbjct: 64 PSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVL---KSDEIREKPDIAWSF 120
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
F W + + Y +V +LA + E+ + + P +V LI
Sbjct: 121 FCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKF--EFPMTVSAANALIK- 177
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
++ K+G++ E +RK + G +P++ + NFL+NGL+ +D +V+E M
Sbjct: 178 ------SFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVME 231
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
I P+ T+N + +CK G K L +E G + D +TY T+I +
Sbjct: 232 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 291
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
LY+ M + + ++ ++ GLCKEGK+ E + +F M+ +G P++ Y LI
Sbjct: 292 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 351
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
Y K G ++++ LL+ M+ G PD T ++V G K GR+ AL+ + G++
Sbjct: 352 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 411
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
I+ Y LI L + R A L E + + G YN L+++ K V +A+ L
Sbjct: 412 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 471
Query: 473 KDEM-VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
M + ++ TY L+ R+ EA+ L D M++ G+ P + R L G C
Sbjct: 472 FKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 531
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ V +A +L A I D + + N + G + + +L G
Sbjct: 532 LSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLADGITERGREVPGR 590
Query: 592 TCKYMIHSLWK 602
MI++L K
Sbjct: 591 IRTVMINALRK 601
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 121/314 (38%), Gaps = 82/314 (26%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA--------YVKVGLIRESFK 191
+ FS + LC+ +L VF+++I N A Y K G + ++ +
Sbjct: 310 HAFSLVIGGLCKEGKL----NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 365
Query: 192 TFRKTLDVGFQPSIVS-----------------------CNF------------LLNGLL 216
+ +D GF+P +V+ C F L++GL
Sbjct: 366 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 425
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDL 275
K +D+ +++EEM G +++ +N L F K+ VD+ +++EEE G D +
Sbjct: 426 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 485
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL------------------- 316
TY L+S K+ R +A L+ +M + + P + L
Sbjct: 486 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 545
Query: 317 ---------------MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+N LCK G+++EA +L + RG +I A K GK
Sbjct: 546 LAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 605
Query: 362 QESKSLLYEMMGNG 375
+ L++ +G G
Sbjct: 606 DLAMKLMHSKIGIG 619
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 177/351 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + +++ + L+ G +P+ V+ L++G K ++ + V+E+M I P
Sbjct: 473 GHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAP 532
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
HTFN + + K G V + L ++GF +TYN++I + K+G ++ A Y
Sbjct: 533 TDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAY 592
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + PD++TYT+L++GLCK K+ A ++ M ++G+ D+V+Y+ LI +CK
Sbjct: 593 REMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKM 652
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + E++ G+ P+T ++ G+ + +ALNL E+ + V +Y
Sbjct: 653 HDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVY 712
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I L ++ + A L + VP + +Y L+ L + +A + EM
Sbjct: 713 TSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDG 772
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
NI PS+ Y LI G EA L DEML+ G++PD +L+NG
Sbjct: 773 NNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 238/520 (45%), Gaps = 21/520 (4%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
LL +S+ SAL FF+ V+ T L++HIL+ N+K +++ L + D
Sbjct: 67 LLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSSLQFLLNNY-VFGD 125
Query: 159 CPHSVDVFQDLISCTEDCNWAY----------------VKVGLIRESFKTFRKTLDVGFQ 202
S VF + C +C+ Y V+V I ++ + FR L+
Sbjct: 126 ATPSAKVF---VECLLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLV 182
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + N LL +++ N + Q+Y+EM GI + +T +++ K G ++V F
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKF 242
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ + G + D Y+ L+ + C++ LN A L + M +P TYT ++ K
Sbjct: 243 FKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVK 302
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G EA +L MV GL +++ +L+ YC G + + L E++ G+ PD
Sbjct: 303 QGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVI 362
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++ G K G + A L ++ G+ + I + L+ + N A L +
Sbjct: 363 FSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV 422
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G + ++ YN L++ L + V +A L ++MV + I PSL +Y LI C G
Sbjct: 423 EHG-ITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMD 481
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A S++ +LE G+ P++ +LI+G+ + D +A + ++N V
Sbjct: 482 KAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVI 541
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + G +S+ + F++ GF ++T +I +K
Sbjct: 542 NGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFK 581
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 1/418 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+ ++ F + ++ G ++V+ N LL L +L +++ ++E+M GI P+ ++N
Sbjct: 410 LLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYN 468
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L CK G +DK L+ I E G P+ VTY LI + KKG AF ++ M
Sbjct: 469 NLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAA 528
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
N+ P T+ T++NGL K G+V E + + +G ++YN++I + KEG + +
Sbjct: 529 NIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSA 588
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
EM +GI PD T ++ G K ++ AL + +++ G+ + Y LI
Sbjct: 589 LLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDG 648
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
C+ + +A+ + G P+ +YN ++ +++ AL L EM+ +
Sbjct: 649 FCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCD 708
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
L Y ++I G+ A+ L EML ++PD + VLING + A +L
Sbjct: 709 LQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILK 768
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
YN + +G+L + L L G P++ T +++ K
Sbjct: 769 EMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D SA FF + D+ + P + Y ++ N A+ + E+++ P +
Sbjct: 654 DMESASKFFTELL-DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK--NKVPCDLQ 710
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
V+ +I +K G + + + + L P IV L+NGL ++
Sbjct: 711 VYTSIIG-------GLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENA 763
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ +EM I P+ +NIL + G++ + +++ ++G PD TY+ L++
Sbjct: 764 SKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Query: 285 YCK 287
K
Sbjct: 824 KLK 826
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 175/352 (49%), Gaps = 2/352 (0%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
DQ E+ G+ P+ T+N + H +C+ G V+K F K+ E+ F PDL T N L
Sbjct: 246 DQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNIL 305
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ C +G L++A L+ + D VTY T+++GLCKEG+ EA L M + L
Sbjct: 306 LRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKL 365
Query: 342 SPDIVSYNTLIFAYC-KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD +YN ++ A EG+++++ +M+ PD FTC I+++G EG L +AL
Sbjct: 366 GPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 425
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ-DGYVPSLEIYNELMES 459
L G +I Y+ +I LC++ R A LL + + +G VP YN ++
Sbjct: 426 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILG 485
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
C+ V A +++MV+++ KP L T L+ C G +A+ L + + G D
Sbjct: 486 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAID 545
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ +I+G C E +A LL +K D +YNA+ A+ G +
Sbjct: 546 AVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 192/400 (48%), Gaps = 30/400 (7%)
Query: 124 PTSSNYCLIVHILAW---NNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNW 178
P +++Y I+ +L W + K ++ L EL+E LV PH + + +I
Sbjct: 225 PDNASYNTILDVL-WLCRSGKTDQSIDKLNELLESGLV---PHQI-TYNTIIH------- 272
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + ++F+ K ++ F+P + +CN LL GL +D +++ G
Sbjct: 273 GYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI 332
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC-KKGRLNDAFYL 297
+ T+N + CK G ++ L ++EE+ PD TYN ++ + +G++ AF
Sbjct: 333 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQF 392
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M ++ PDL T L+ GLC EG + A +LF+ + +G + D V+YNT+I CK
Sbjct: 393 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452
Query: 358 EGKMQESKSLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSAL---NLVVELQRFGVSI 413
EG+ +E+ LL EM NG+ PD T I+ GY +EG++ A N +VE S
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVE-----KSF 507
Query: 414 SRDIY--DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
D++ + L+ LC++ A L G YN ++ LCK +A
Sbjct: 508 KPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 567
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
L EM ++ + P TY A++C GR EA M ++
Sbjct: 568 LLAEMKEKKLGPDCYTYNAILCALADAGRM-EAEEFMSKI 606
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 144/293 (49%), Gaps = 16/293 (5%)
Query: 108 SALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVD 164
+AL FN W+ I + Y I+ L +F A +L E+ E L DC
Sbjct: 317 NALKLFNTWISKGKAIDAVT--YNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCY---- 370
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ ++ D G + ++F+ K ++ F+P + +CN LL GL +D
Sbjct: 371 TYNAILCALADAE------GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 424
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDLVTYNTLIS 283
+++ G + T+N + CK G ++ L ++EE+ G PD TYNT+I
Sbjct: 425 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIIL 484
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
YC++G++ AF M ++ PDL T L+ GLC+EG + +A +LF+ + +G +
Sbjct: 485 GYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAI 544
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
D V+YNT+I CKEG+ +E+ LL EM + PD +T I+ GR+
Sbjct: 545 DAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 108 SALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+AL FN W+ I + Y I+ L +F A +L E+ E P +
Sbjct: 423 NALKLFNTWISKGKAIDAVT--YNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQT-TY 479
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+I Y + G + ++F+ K ++ F+P + +CN LL GL + + + +
Sbjct: 480 NTII-------LGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALK 532
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++ G + T+N + CK G ++ L +++E+ PD TYN ++ +
Sbjct: 533 LFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALA 592
Query: 287 KKGRLNDAFYLYRI 300
GR+ ++ +I
Sbjct: 593 DAGRMEAEEFMSKI 606
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 26/219 (11%)
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS--------- 465
R I D I A NRP A + R+ + P+L N L+ +L + S
Sbjct: 135 RVILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKA 194
Query: 466 -------------VADALLLKDEMVDRNIKPSLSTYRAL--ICCFCGIGRSGEAVSLMDE 510
+++A+ L +M D + P ++Y + + C G++ +++ ++E
Sbjct: 195 IFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNE 254
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+LESG++P +I+GYC E V KA +K D + N + +G
Sbjct: 255 LLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGM 314
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
L ++L ++ G A + +T +I L K E +F+
Sbjct: 315 LDNALKLFNTWISKGKAIDAVTYNTIISGLCK--EGRFE 351
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/577 (24%), Positives = 249/577 (43%), Gaps = 84/577 (14%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML 149
L H + +VL+ DS AL FFN++ + T++++ ++VH L N F A +L
Sbjct: 60 LKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLL 119
Query: 150 CELVELVKDCPHSVDVFQDLISCTEDCNWA-----------YVKVGLIRESFKTFRKTLD 198
L+ D VF+ + + C ++ Y++ + ++ R L
Sbjct: 120 HTLLLRGSDPKF---VFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLG 176
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT---------------- 242
P + + + +LNGLL++ W+V++E G+ P+ +T
Sbjct: 177 NTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCR 236
Query: 243 -------------------FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+N+L H CK G V + + + E+G D+VTY TL+
Sbjct: 237 AKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVL 296
Query: 284 SYC-----------------------------------KKGRLNDAFYLYRIMYRRNVLP 308
+C KKG ++ A+ L + R LP
Sbjct: 297 GFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLP 356
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+L Y L+N LCK + +A L+ M L + V+Y+ LI ++CK G + ++S
Sbjct: 357 NLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF 416
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M+ +GI + ++ G+ K G L +A L ++ G+ + + LI C+D
Sbjct: 417 GRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKD 476
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A L + + PS+ + L+ LC + +A+A L DEMV+R IKP+ TY
Sbjct: 477 LQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTY 536
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+I +C +A L+++ML +G++PD+ R LI+G C V+ A+ + K
Sbjct: 537 NVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHK 596
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
K + Y+A+ + + G L++ + ++ G
Sbjct: 597 KNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRG 633
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 196/406 (48%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+++GF P+ + + L++GL K ID + + ++GR G PN +N L + CK D+
Sbjct: 315 VELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDL 374
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
DK + + + VTY+ LI S+CK+G L+ A + M + + Y +L
Sbjct: 375 DKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSL 434
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+NG CK G + A L+ +M++ GL P ++ TLI YCK+ +++++ L EM I
Sbjct: 435 INGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P +T ++ G + A L E+ + + Y+ +I C+ + A
Sbjct: 495 APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFE 554
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LLE + +G VP Y L+ LC V+ A D++ +N+K + Y AL+ +C
Sbjct: 555 LLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYC 614
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G GR EA+S EM++ G+ D VLI+G ++D+ + LL + D+
Sbjct: 615 GQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSV 674
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y ++ + ++++G K E + PN +T ++ L K
Sbjct: 675 IYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCK 720
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 209/450 (46%), Gaps = 23/450 (5%)
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ F LIS Y K + ++FK +R+ + PS+ + L+ GL N +
Sbjct: 462 TATTFTTLIS-------GYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++++EM I P T+N++ +CK ++DK LE + G PD TY L
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
IS C GR++ A ++++N+ + + Y+ L++G C +G++ EA M+ RG+
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA-- 399
+ D+V + LI K+ M+ LL +M G+ PD+ ++ Y KEG +
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGE 694
Query: 400 -LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L+L+V + F ++ Y + LC+ A L E++ P+ Y ++
Sbjct: 695 CLDLMVTEKCFPNVVT---YTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLD 751
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
SL K ++ +A L EM+ + + + +TY LI FC +GR EA ++ EM E+G+ P
Sbjct: 752 SLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +I +C DV A L +K D+ ++N + +G L K EL+
Sbjct: 811 DCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELR 870
Query: 579 KRFLRLGFAPNNL---------TCKYMIHS 599
L G P + C +++H
Sbjct: 871 NDMLSRGLKPRQILQLQKRDLGVCNFLMHG 900
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 212/523 (40%), Gaps = 106/523 (20%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I ++ K GF P++ N L+N L K +D+ +Y+ M + + N
Sbjct: 335 KKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDV 394
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEE--------------------------------- 268
T++IL FCK G +D + ++ E
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM 454
Query: 269 --EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
EG +P T+ TLIS YCK ++ AF LYR M + + P + T+T L+ GLC ++
Sbjct: 455 INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA +LF MV R + P V+YN +I YCK M ++ LL +M+ NG+ PDT+T + +
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS---------- 436
+ G GR+ +A + + +L + + ++ Y L+ C R A S
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634
Query: 437 -------------------------LLERIGQDGYVPSLEIYNELMES------------ 459
LL+++ G P IY ++++
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGE 694
Query: 460 -----------------------LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LCK + A L ++M+ NI P+ TY +
Sbjct: 695 CLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLT 754
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G EA L EML+ G+L ++ +LI G+C + +A +L + D
Sbjct: 755 KEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCI 813
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+Y+ + GD+ +EL LR G P+++ +I+
Sbjct: 814 TYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYG 856
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 194/421 (46%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ + + + G + +V+ L+ G ++ D + EM +G P
Sbjct: 265 KGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEA 324
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L K G++D + K+ GF P+L YN LI++ CK L+ A LY+ M
Sbjct: 325 AVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNM 384
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ N+ + VTY+ L++ CK G + A F RM+ G+ I YN+LI +CK G +
Sbjct: 385 HSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDL 444
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L +M+ G+ P T ++ GY K+ ++ A L E+ ++ S + L
Sbjct: 445 SAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTAL 504
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC N A+ L + + + P+ YN ++E CK ++ A L ++M+ +
Sbjct: 505 IYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGL 564
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TYR LI C GR A +D++ + + + L++GYC + + +A +
Sbjct: 565 VPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALS 624
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
++ D + + + + D+ +L L K+ G P+++ MI +
Sbjct: 625 ASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYS 684
Query: 602 K 602
K
Sbjct: 685 K 685
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 206/438 (47%), Gaps = 10/438 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ +SA F + ++PT++ + ++ + + A K+ E+ E K+
Sbjct: 439 CKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNE--KEIAP 496
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
SV F LI + + E+ K F + ++ +P+ V+ N ++ G K + +
Sbjct: 497 SVYTFTALI-------YGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNM 549
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D+ +++ E+M G+ P+T+T+ L C G V F++ + ++ + + Y+ L
Sbjct: 550 DKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ YC +GRL +A M +R + DLV + L++G K+ ++ L +M +GL
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGL 669
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD V Y ++I AY KEG ++S L M+ +P+ T + G K G + A +
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L ++ +S + Y + +L ++ AT L + + G + + YN L+ C
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFC 788
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + +A + EM + I P TY +I C G G AV L D ML G+ PDS
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSV 848
Query: 522 ICRVLINGYCMEKDVNKA 539
+LI G C+ ++KA
Sbjct: 849 AFNLLIYGCCVNGALDKA 866
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 18/253 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQ----PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY K G SFK + LD+ P++V+ +NGL K+ ID+ ++E+M
Sbjct: 682 AYSKEG----SFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTA 737
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
I PN+ T+ K G++ + ++ + G + TYN LI +CK GRL +A
Sbjct: 738 NISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEA 796
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ M + PD +TY+T++ C+ G V A +L+ M+ +G+ PD V++N LI+
Sbjct: 797 TKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYG 856
Query: 355 YCKEGKMQESKSLLYEMMGNGIYP---------DTFTCQIIVQGYGKEGRLLSALNLVVE 405
C G + ++ L +M+ G+ P D C ++ G G + +AL L
Sbjct: 857 CCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHS 916
Query: 406 LQRFGVSISRDIY 418
+ V +S +++
Sbjct: 917 MLTRAVKLSLEMW 929
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 19/267 (7%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D ++P S Y ++ A++ + SF C + + + C F ++++ T N
Sbjct: 666 DQGLRPDSVIYTSMID--AYSKEGSFKKSGECLDLMVTEKC------FPNVVTYTAFMN- 716
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
KVG I + F K L P+ V+ L+ L K + + ++ EM + G+
Sbjct: 717 GLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLA 775
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+NIL FCK G + + L ++ E G PD +TY+T+I +C+ G + A L+
Sbjct: 776 NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELW 835
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP---------DIVSYN 349
M R+ V PD V + L+ G C G + +A +L + M+ RGL P D+ N
Sbjct: 836 DTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCN 895
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGI 376
L+ C G++ + L + M+ +
Sbjct: 896 FLMHGGCVTGEVDTALRLYHSMLTRAV 922
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 8/397 (2%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K L +G++P V+ L+NG + N + + ++M IG P+ +N + CK
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V+ F ++IE +G P++VTY L++ C R +DA L M ++ + P+++TY+
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ K GKV EA +LF MV + PDIV+Y++L+ C ++ E+ + M+
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G D + ++ G+ K R+ + L E+ + G+ + Y+ LI Q A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
++ G P + YN L+ LC + AL++ ++M R + + TY +I
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
C G+ EA SL + G+ PD +++G C + +++ EAL ++ + +
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ + DGD++ EL K+ L G+AP+ L
Sbjct: 505 DCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 184/398 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ ++KL D + ++M +GI + +TFNI+ + FC V
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD VT +L++ +C++ R++DA L M PD+V Y +++ LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V +A F + +G+ P++V+Y L+ C + ++ LL +M+ I P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ + K G++L A L E+ R + Y L+ LC +R A + + +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G + + YN L+ CK V D + L EM R + + TY LI F G
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A +M G+ PD +L+ G C ++ KA + K+ D +Y V
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G + + L G P+ +T M+ L
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 145/280 (51%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + ++F F++ G +P++V+ L+NGL + ++ +M + I PN
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F KNG V + E++ DPD+VTY++L++ C R+++A ++ +M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ L D+V+Y TL+NG CK +V + +LF M RGL + V+YNTLI + + G +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ +M GI PD +T I++ G G L AL + ++Q+ + + Y +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
I +C+ + A SL + G P + Y +M LC
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 164/337 (48%), Gaps = 18/337 (5%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSD--SV 107
+ P+ N I+D +C + + D+ + + K + P++ + + V C S S
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT-ALVNGLCNSSRWSD 243
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+A + +K +I P Y ++ N K A ++ E+V + D P V +
Sbjct: 244 AARLLSDMIKK--KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID-PDIV-TYS 299
Query: 168 DLIS--CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
L++ C D I E+ + F + G +VS N L+NG K ++
Sbjct: 300 SLVNGLCLHD---------RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+++ EM + G+ NT T+N L F + GDVDK F +++ G PD+ TYN L+
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C G L A ++ M +R + D+VTYTT++ G+CK GKV EA LF + +GL PDI
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
V+Y T++ C +G + E ++L +M G+ + T
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 21/362 (5%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C++ V+ A FF ++ I+P Y +V+ L ++++S A ++L ++++ K
Sbjct: 201 CKTKRVNDAFDFFKEIERK-GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK--KKIT 257
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+V + L+ A+VK G + E+ + F + + + P IV+ + L+NGL +
Sbjct: 258 PNVITYSALLD-------AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR 310
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID+ Q+++ M G + ++N L + FCK V+ ++ + G + VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI + + G ++ A + M + PD+ TY L+ GLC G++ +A +F M R
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ DIV+Y T+I CK GK++E+ SL + G+ PD T ++ G +G L
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L ++++ G+ + D D + L++++ GY PSL ++ +
Sbjct: 491 ALYTKMKQEGL-MKND-------CTLSDGDITLSAELIKKMLSCGYAPSL--LKDIKSGV 540
Query: 461 CK 462
CK
Sbjct: 541 CK 542
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+LNDA L+ M + P +V + L++ + K K L +M G+ D+ ++N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+I +C ++ + S+L +M+ G PD T +V G+ + R+ A++LV ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G Y+ +I +LC+ R A + I + G P++ Y L+ LC +DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L +M+ + I P++ TY AL+ F G+ EA L +EM+ + PD L+NG
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNG 304
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C+ +++A + K + D SYN + N F + + M+L + + G N
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 590 NLTCKYMIHSLWKG 603
+T +I ++
Sbjct: 365 TVTYNTLIQGFFQA 378
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 233/486 (47%), Gaps = 15/486 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P S +H+L N+ A++ L E +++V+ P+ + + LI Y
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFL-ERMQIVEIXPNVI-TYNCLIK-------GYC 250
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPNT 240
+ + ++ + + G P +S ++ L K I + + E+M + + P+
Sbjct: 251 DLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQ 310
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N H+ K+G D+ FL + EE F D V Y+ ++ S+C++GR++ A +
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M+ + +PD+VTYT+++NGLC+E KV +A ++ +M G P+ VSY L+ CK G
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
E++ ++ P+ T +++ G+ +EG+ A +LV E+ + G + +
Sbjct: 431 SLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 490
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI +LCQ+ + A +E+ +G ++ + ++ C+ D + AL L D+M N
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY +I GR EA L +ML G +P R +I+ YC + + E
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCR---MGRVE 607
Query: 541 ALLGFFAKKFQIYDTES-YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL K + + YN V G+L + +L + LR + TC +I S
Sbjct: 608 DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIES 667
Query: 600 -LWKGM 604
L KG+
Sbjct: 668 YLSKGI 673
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/547 (22%), Positives = 248/547 (45%), Gaps = 11/547 (2%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
E ++ + +V IC ++ + L+ +L+ LL L ++ VL + Q+D AL FF
Sbjct: 63 EDESRHPLVREICRLIELRSAWNPKLEGELRHLLRSLKPRQVCAVL-QLQTDERVALRFF 121
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT 173
W + Y ++ IL+ A ++L + + + + F ++
Sbjct: 122 YWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAK--RRIERRPEAFGYVMV-- 177
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
+Y + G +R + + G +P + CN ++ L+ N +D+ + E M
Sbjct: 178 -----SYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQI 232
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ I PN T+N L +C ++ + ++ +G PD ++Y T++ CK+ R+ +
Sbjct: 233 VEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKE 292
Query: 294 AFYLYRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
L M + N+LPD VTY T ++ L K G EA + R D V Y+ ++
Sbjct: 293 LRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIV 352
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
++C+EG+M ++K ++ EM G PD T ++ G +E ++ A ++ ++ + G
Sbjct: 353 HSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCK 412
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y L+ LC++ A ++ + ++P+ Y+ LM + ++A L
Sbjct: 413 PNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDL 472
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EM+ + P+ LI C + EA M++ L +G + +I+G+C
Sbjct: 473 VREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQ 532
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ D+ A +LL + D +Y + + + G + + +L + LR+G+ P +T
Sbjct: 533 KDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVT 592
Query: 593 CKYMIHS 599
+ +IH
Sbjct: 593 YRTVIHQ 599
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 204/437 (46%), Gaps = 17/437 (3%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL---VKDCPHSVDVFQDLISCTED 175
D + P Y VH+L+ + A++ L E E V +S V
Sbjct: 303 DSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVH--------- 353
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
++ + G + ++ + + G P +V+ ++NGL + +DQ ++ +M + G
Sbjct: 354 ---SFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PNT ++ L + CKNG+ + + EE + P+ +TY+ L+ + ++G+ ++A
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEAC 470
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L R M ++ P V L+ LC+E KV EA + + ++ G + ++V++ T+I +
Sbjct: 471 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
C++ ++ + SLL +M + +PD T I+ GK+GR+ A L +++ R G +
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTP 590
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y +I C+ R LLE++ + YN+++E LC ++ A L +
Sbjct: 591 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT--AYNQVIEKLCSFGNLEQAYKLLGK 648
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
++ K +T LI + G + ++ M ++PD ++C + +E
Sbjct: 649 VLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGK 708
Query: 536 VNKAEALLGFFAKKFQI 552
+A+ L+ F ++ +I
Sbjct: 709 SEEADKLILRFVERGRI 725
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 195/405 (48%), Gaps = 5/405 (1%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ R G + +V+ L+ GL +D ++ EM G+ PN ++ L
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLL 192
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+C++G V+ E++ G +PD++ + I CKKGR+ A + IM +R +
Sbjct: 193 RGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VTY L+N LCKEG VREA L + M +G++PD+V+YNTLI +M + L
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312
Query: 368 LYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM+ + PD T ++ G K GR+ A+++ + G + Y+YLI
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGF 372
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ ++ A +L+ + G P Y+ L+ K V A + M R I+ L
Sbjct: 373 LRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAEL 432
Query: 486 STYRALICCFCGIGRSGEAVSLMDEM-LESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
Y L+ C +G +A+ L +EM + G+ D+ ++ G C D+ A+ LL
Sbjct: 433 FHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQ 490
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D +Y+ + NMFA+ GDL + + K+ GF P+
Sbjct: 491 DMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPD 535
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 185/362 (51%), Gaps = 3/362 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G ++ K F + +G +P ++ ++ L K I + +V + M + G+ P
Sbjct: 194 GYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEP 253
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N+L + CK G V + +++++G PD+VTYNTLI+ ++ A L
Sbjct: 254 NVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLL 313
Query: 299 RIMYRRNVL--PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M + + L PD+VT+ ++++GLCK G++R+A + M RG ++V+YN LI +
Sbjct: 314 EEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFL 373
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ K+ + +L+ E++ +G+ PD+FT I++ G+ K + A + + + G+
Sbjct: 374 RVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELF 433
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+ ALCQ A L + + + ++ Y+ +M CK + A L +M
Sbjct: 434 HYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVA-YSTMMYGACKSGDIKAAKQLLQDM 492
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+D + P TY LI F +G EA ++ +M SG +PD + LI GY E +
Sbjct: 493 LDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQI 552
Query: 537 NK 538
NK
Sbjct: 553 NK 554
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 165/338 (48%), Gaps = 9/338 (2%)
Query: 274 DLVTYNTLISSYCKKG-RLNDAFYLYRIMYRRN---VLPDLVTYTTLMNGLCKEGKVREA 329
D V+YN ++++ C++G L A L M R P+ V+YT +M GLC + EA
Sbjct: 75 DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L M G+ D+V+Y TLI C ++ + LL EM G+G++P+ +++G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y + GR + E+ R GV ++ I LC+ R A + + + Q G P+
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN L+ LCK SV +AL L++EM D+ + P + TY LI G+ A+ L++
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314
Query: 510 EMLESGML--PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
EM++ L PD +I+G C + +A ++ A++ + + +YN + F
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS---LWK 602
++ M L + G P++ T +I+ LW+
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+ SV AL N + +D + P Y ++ L+ + AM +L E+++
Sbjct: 266 CKEGSVREALALRNEM-DDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVE 324
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
V F +I K+G +R++ + G ++V+ N+L+ G L+++
Sbjct: 325 PDVVTFNSVIH-------GLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHK 377
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
++ + E+ G+ P++ T++IL + F K +VD+ FL + + G +L Y
Sbjct: 378 VNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIP 437
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+++ C+ G + A L+ M N D V Y+T+M G CK G ++ A QL M+ G
Sbjct: 438 LLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEG 496
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L+PD V+Y+ LI + K G ++E++ +L +M +G PD +++GY EG++ L
Sbjct: 497 LAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKIL 556
Query: 401 NLVVELQRFGVSI 413
+L+ E++ V+I
Sbjct: 557 DLIHEMRAKNVAI 569
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 5/303 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--GRIGICPN 239
K G +RE+ + D G P +V+ N L+ GL + +D + EEM G + P+
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TFN + H CK G + + E + E G +LVTYN LI + + ++N A L
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ + PD TY+ L+NG K +V A M RG+ ++ Y L+ A C+ G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446
Query: 360 KMQESKSLLYEM-MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+++ L EM M G+ D ++ G K G + +A L+ ++ G++ Y
Sbjct: 447 MMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTY 504
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI + A +L+++ G+VP + +++ L++ + L L EM
Sbjct: 505 SILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRA 564
Query: 479 RNI 481
+N+
Sbjct: 565 KNV 567
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 206/422 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G + + FR+ +++ + ++ S +L+GL K ++ ++ +E+ G+
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N + K D+ V L +E+EG ++VTY LI + G++ +A L+
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + D+ YT++++ C+ G V+ A LF M +GL P +Y LI CK
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M+ ++ L+ EM G GI + ++ GY + G + AL L V +++ G+ Y
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ + LC+ NR A LL + + G P+ + L++ CK + +A + EM +
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P++ TY LI + G EA L DE+ G++PD C LI+G C++ V+
Sbjct: 499 KGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDM 558
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L ++ + + +Y A+ + ++DG + +L G P++ ++
Sbjct: 559 ALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVG 618
Query: 599 SL 600
SL
Sbjct: 619 SL 620
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 193/423 (45%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + E+ + F GF SC L L + +D C + + M + +
Sbjct: 165 YADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 224
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ I+ CK GDV+ ++++ +G ++VTYN I Y K+ L +
Sbjct: 225 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 284
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + V ++VTYT L++G GK+ EA +LF M +G+ D+ Y ++I C+ G
Sbjct: 285 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 344
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ + L EM G+ P T ++ G K G++ +A LV E+Q G+ ++ I++
Sbjct: 345 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 404
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C+ A L + + G + YN + LCK + +A L MV+R
Sbjct: 405 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVER 464
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P+ ++ LI +C G EA + EM E G +P+ VLI+GY ++ +A
Sbjct: 465 GVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEA 524
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L + I D + ++ + DG + ++L + G PN +T MI
Sbjct: 525 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 584
Query: 600 LWK 602
L K
Sbjct: 585 LSK 587
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 169/337 (50%), Gaps = 9/337 (2%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y L++H + K A ++ E+ E K V V+ +ISC +C VK L+
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMRE--KGIEADVYVYTSIISC--NCRSGNVKRALV-- 351
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F + D G PS + L++G+ K ++ + EM GI N FN L
Sbjct: 352 ---LFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLID 408
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+C++G VD+ +E++G + D+ YN++ S CK R ++A L M R V P
Sbjct: 409 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 468
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ +++TTL++ CKEG EA ++F M +G P+I++YN LI Y K G M+E+ L
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 528
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
E+ G+ PD +TC ++ G +G++ AL L E+ + G+ + Y +I L +D
Sbjct: 529 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 588
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
R A L + + + G P +Y+ L+ SL +S
Sbjct: 589 GRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSAES 625
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 172/392 (43%), Gaps = 35/392 (8%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L V+ N + E +E++GF D + + + + G+++ +R M
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE---- 358
+V + + T +++GLCK G V +L + +G+ ++V+YN I Y K
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277
Query: 359 -------------------------------GKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
GK++E++ L EM GI D + I+
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ G + AL L E+ G+ S Y LI +C+ + AA L+ + G
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ I+N L++ C+ V +AL L+ M + ++ + Y ++ C + R EA L
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M+E G+ P++ LI+ YC E + +A+ + +K + + +YN + + +++
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G++ + +L+ G P+ TC +IH
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 549
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 209/440 (47%), Gaps = 7/440 (1%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI+C + ++GL SF F K L GF P+ ++ N L+ GL I Q
Sbjct: 108 FNILINC-------FSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQAL 160
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++++ G + ++ L + CK G + L++++ + P+ V YN +I +
Sbjct: 161 NFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNM 220
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK +NDAF LY M + + PD T +L+ G C G+++EA L H+M+ ++P +
Sbjct: 221 CKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRM 280
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+++ L+ A+CKEGK++E+K +L M I D T ++ GY + A ++
Sbjct: 281 YTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDS 340
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ GV + Y +I LC+ A +L E + +P++ YN L++ L K
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
++ L L DEM DR P++ TY +++ C +A++L+ + + G+ PD V
Sbjct: 401 ISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTV 460
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI G C + A+ + K D +Y + F G + L + G
Sbjct: 461 LIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNG 520
Query: 586 FAPNNLTCKYMIHSLWKGME 605
PN T + +I SL++ E
Sbjct: 521 CIPNAKTYEIVILSLFEKDE 540
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 265/567 (46%), Gaps = 46/567 (8%)
Query: 24 FSSASSSYS-LQIIQDSEHKSLSNPLYNFLPETQNPNKIV---DLICSSLKKGDSHLTLL 79
F S+ S YS L QD E+ +S+ +N L +NP + + I SSL K H T L
Sbjct: 33 FPSSISLYSQLHHHQDEENNLISS--FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTAL 90
Query: 80 ----QNDLKPLLPHLGAHEISRVLLRCQS----DSVSALTFFNWVKNDLEIKPTSSN--- 128
Q +L ++ I L+ C S +S+S F +K + + N
Sbjct: 91 SLHQQMELNGIVSDFFTFNI---LINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLI 147
Query: 129 --YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
CL HI + +F K++ + L D +S N KVG I
Sbjct: 148 KGLCLKGHI---HQALNFHDKVVAQGFHL------------DQVSYGTLIN-GLCKVGRI 191
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ + ++ QP+ V N +++ + K ++ + +Y +M I P+ T N L
Sbjct: 192 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL 251
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+ FC G + + G L K+ E +P + T++ L+ ++CK+G++ +A + + ++++
Sbjct: 252 IYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDI 311
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+ D+VTY +LM+G C ++ +A +F M RG+ ++ SY T+I CK + E+ +
Sbjct: 312 ILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVN 371
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L EM I P+ T ++ G GK G++ L LV E+ G + Y+ ++ ALC
Sbjct: 372 LFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALC 431
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+++ A +LL + G P + Y L++ LC+ + DA + ++++ + +
Sbjct: 432 KNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVY 491
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK-AEALL-- 543
TY +I FC G A++L+ +M ++G +P+++ ++I EKD N AE LL
Sbjct: 492 TYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILS-LFEKDENDMAEKLLRE 550
Query: 544 ----GFFAKKFQIYDTESYNAVFNMFA 566
G +K IY V M A
Sbjct: 551 MIARGLLDEKSYIYLASKETGVMGMGA 577
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 197/407 (48%), Gaps = 12/407 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + N L+N +L + V+ ++ + G PN TFN L C G + +
Sbjct: 100 GIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQA 159
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ +GF D V+Y TLI+ CK GR+ A L + + + V P+ V Y +++
Sbjct: 160 LNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDN 219
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+CK V +A L+ +MV + +SPD + N+LI+ +C G+++E+ LL++M+ I P
Sbjct: 220 MCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPR 279
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI------YDYLIVALCQDNRPFA 433
+T I+V + KEG++ A ++ GV++ +DI Y+ L+ C
Sbjct: 280 MYTFSILVDAFCKEGKVKEAKMML------GVTMKKDIILDVVTYNSLMDGYCLVKEINK 333
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + + + G + +++ Y ++ LCK V +A+ L +EM R I P++ TY +LI
Sbjct: 334 AKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLID 393
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
+G+ + L+DEM + G P+ +++ C V+KA ALL +
Sbjct: 394 GLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRP 453
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D +Y + + G L ++ + L G+ + T MI
Sbjct: 454 DMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGF 500
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 148/303 (48%)
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+++ +N P ++ + +++ L K A L +M G+ D ++N LI + + G
Sbjct: 60 LLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLG 119
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
S S+ +++ G P+ T +++G +G + ALN ++ G + + Y
Sbjct: 120 LNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYG 179
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC+ R AA LL+R+ P+ +YN +++++CK V DA L +MV +
Sbjct: 180 TLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 239
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
I P T +LI FC +G+ EAV L+ +M+ + P +L++ +C E V +A
Sbjct: 240 RISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEA 299
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ +LG KK I D +YN++ + + +++K ++ G N + MI+
Sbjct: 300 KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMING 359
Query: 600 LWK 602
L K
Sbjct: 360 LCK 362
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 163/339 (48%)
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++E G D T+N LI+ + + G + +F ++ + ++ P+ +T+ TL+ GLC +
Sbjct: 94 QQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLK 153
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G + +A ++V +G D VSY TLI CK G++ + LL + G + P+
Sbjct: 154 GHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMY 213
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+I+ K + A +L ++ +S + LI C + A LL ++
Sbjct: 214 NMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMIL 273
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+ P + ++ L+++ CK V +A ++ + ++I + TY +L+ +C + +
Sbjct: 274 ENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINK 333
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A + D M G++ + Q +ING C K V++A L + I + +YN++ +
Sbjct: 334 AKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLID 393
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G +S +++L G PN +T ++ +L K
Sbjct: 394 GLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCK 432
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 221/495 (44%), Gaps = 11/495 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +FF W + + Y +V +LA + E+ + + P +V
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKF--EFPMTVSAANA 192
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI ++ K+G++ E +RK + G +P++ + NFL+NGL+ +D +V+
Sbjct: 193 LIK-------SFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M I P+ T+N + +CK G K L +E G + D +TY T+I +
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
LY+ M + + ++ ++ GLCKEGK+ E + +F M+ +G P++ Y
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
LI Y K G ++++ LL+ M+ G PD T ++V G K GR+ AL+ +
Sbjct: 366 TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRF 425
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G++I+ Y LI L + R A L E + + G YN L+++ K V +
Sbjct: 426 DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDE 485
Query: 469 ALLLKDEM-VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A+ L M + ++ TY L+ R+ EA+ L D M++ G+ P + R L
Sbjct: 486 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C+ V +A +L A I D + + N + G + + +L G
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLADGITERGRE 604
Query: 588 PNNLTCKYMIHSLWK 602
MI++L K
Sbjct: 605 VPGRIRTVMINALRK 619
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 104/267 (38%), Gaps = 70/267 (26%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVS-----------------------CNF----- 210
Y K G + ++ + + +D GF+P +V+ C F
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 211 -------LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
L++GL K +D+ +++EEM G +++ +N L F K+ VD+
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 264 EKIEEE-GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL------ 316
+++EEE G D + TY L+S K+ R +A L+ +M + + P + L
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 317 ----------------------------MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
+N LCK G+++EA +L + RG
Sbjct: 551 SGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIR 610
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNG 375
+I A K GK + L++ +G G
Sbjct: 611 TVMINALRKVGKADLAMKLMHSKIGIG 637
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 223/483 (46%), Gaps = 16/483 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y ++ KF A +L + + C SV + +++C K
Sbjct: 336 PCAYAYNTMIMGYGSAGKFDEAYSLLER--QKARGCIPSVIAYNCILTCLG-------KK 386
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ +TF + + P++ + N L++ L K ++ ++V + M G+ PN T
Sbjct: 387 GRLGEALRTFEE-MKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTV 445
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ CK +D+ E + + PD VT+ +LI K+GR++DA+ LY M
Sbjct: 446 NIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ +P+ V YT+L+ K G+ + H++F M+HRG SPD+ N + K G+ +
Sbjct: 506 SDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGK 565
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
++L E+ G PD + I++ G K G L ++ G + Y+ I
Sbjct: 566 GRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFID 625
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ + A LLE + G P++ Y +++ L K D + +A +L +E ++
Sbjct: 626 GFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLEL 685
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ Y +LI F +GR EA +M+E+++ G+ P+ L++ +++N EAL+
Sbjct: 686 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN--EALV 743
Query: 544 GFFAKKFQIYDTE---SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F K + T +Y+ + N +K + + G PN +T MI L
Sbjct: 744 CFQNMK-NLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGL 802
Query: 601 WKG 603
K
Sbjct: 803 AKA 805
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 249/554 (44%), Gaps = 20/554 (3%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
++ ++VD +C L+ G+ + +N L + + VL R + D A+++F
Sbjct: 58 KSGTAKEVVDDVCKILESGNWGPDV-ENALSLFVESPKTDLVIGVLRRAK-DVNQAISYF 115
Query: 114 NWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
W K D + P + + L+V +A N KF + ++L E+ + P + + ++S
Sbjct: 116 RWTERKTDQALCPEAYDSLLLV--MAKNVKFDYFEQILGEM-SIAGFGPSTKTCIELILS 172
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C +K +RE F + F+P+ + L+ L + D ++ +M
Sbjct: 173 C--------IKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQM 224
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+G + H F + VF + G +D L++++ D+V YN I + K G++
Sbjct: 225 QELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKV 284
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+ A+ + + +LPD VTYT+++ LCK ++ EA ++F +M P +YNT+
Sbjct: 285 DMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM 344
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I Y GK E+ SLL G P I+ GK+GRL AL E+++
Sbjct: 345 IMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-DA 403
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ + Y+ LI LC+ AA + + + + G P++ N +++ LCK + +A
Sbjct: 404 APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACS 463
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY- 530
+ + M + P T+ +LI GR +A L ++ML+S +P++ + LI +
Sbjct: 464 IFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFF 523
Query: 531 -CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C K+ + + D NA + + G+ K L + GF P+
Sbjct: 524 KCGRKE--DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD 581
Query: 590 NLTCKYMIHSLWKG 603
++ +IH L K
Sbjct: 582 VMSYSILIHGLVKA 595
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 205/473 (43%), Gaps = 45/473 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ Y I+ L + A++ E+ KD ++ + LI K
Sbjct: 371 PSVIAYNCILTCLGKKGRLGEALRTF---EEMKKDAAPNLSTYNVLID-------MLCKA 420
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + +FK + G P++++ N +++ L K +D+ ++E M P+ TF
Sbjct: 421 GEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTF 480
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L K G VD E++ + P+ V Y +LI S+ K GR D +++ M
Sbjct: 481 CSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIH 540
Query: 304 RN-----------------------------------VLPDLVTYTTLMNGLCKEGKVRE 328
R +PD+++Y+ L++GL K G RE
Sbjct: 541 RGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARE 600
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
++LF+ M +G D +YNT I +CK GK+ ++ LL EM G P T ++
Sbjct: 601 TYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVID 660
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G K RL A L E + G+ ++ IY LI + R A ++E + Q G P
Sbjct: 661 GLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 720
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ +N L+++L K + + +AL+ M + P+ TY LI C + + +A
Sbjct: 721 NVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFW 780
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
EM + G+ P++ +I G ++ +A +L F + D+ SYNA+
Sbjct: 781 QEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 152/310 (49%), Gaps = 19/310 (6%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD--C---PHSVDVFQDLISCTEDCNW 178
P +Y +++H L K FA + EL +K+ C H+ + F D
Sbjct: 580 PDVMSYSILIHGLV---KAGFARETY-ELFYAMKEQGCVLDTHAYNTFID---------- 625
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + ++++ + G QP++V+ +++GL K++ +D+ + ++EE G+
Sbjct: 626 GFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLEL 685
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++ L F K G +D+ +E++ ++G P++ T+N L+ + K +N+A +
Sbjct: 686 NVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCF 745
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M P+ +TY+ L+NGLC+ K +A + M +GL P+ ++Y T+I K
Sbjct: 746 QNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKA 805
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E+ SL NG PD+ + I++G R + A + E + G +I
Sbjct: 806 GNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTC 865
Query: 419 DYLIVALCQD 428
L+ AL +D
Sbjct: 866 IALLDALQKD 875
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 4/367 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV + LL + ++ +Y++M GI NT+T NIL + FC +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L I + G+ P T+ TLI C +G++ +A L+ M PD++TY TL+NGLCK
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ ++ EA LF M+ +G+SP+ +Y++LI C G +E+ L Y M+ I PD T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 383 CQIIVQGYGKEGRLL---SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+V KEG + A+ L E+ + G+ Y+ LI LC R A +L
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G +P L Y L + LCK +A+A++L + N+ P + Y ++ C G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK-FQIYDTESY 558
A L ++ G+ PD + ++ING C + + +A L G + + Y T S
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFSR 367
Query: 559 NAVFNMF 565
NA +F
Sbjct: 368 NAFKGIF 374
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 183/373 (49%), Gaps = 11/373 (2%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
P VD + L S T +++ V +++ G + + N L+N LN
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTV--------LSLYKQMDSFGIPHNTYTLNILINSFCHLN 59
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ + V ++ ++G P+T TF L C G + + +K+ EGF PD++TY
Sbjct: 60 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 119
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
TLI+ CK +L +A L+ M + + P+ TY++L++GLC G +EA +LF+ M+HR
Sbjct: 120 TLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 179
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQ---ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ PD +++NTL+ A CKEG +Q ++ L EM G+ PDT T ++ G GRL
Sbjct: 180 KIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A+ L E+ +G Y L LC+++R A LL+ I P + IY+ +
Sbjct: 240 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 299
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
M+ +C+ + A L ++ + + P + TY +I C G EA L EM E+ +
Sbjct: 300 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359
Query: 517 LPDSQICRVLING 529
S R G
Sbjct: 360 ESYSTFSRNAFKG 372
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 16/310 (5%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNWAYVKVGLIRESFKTFRKTL 197
N+ FA +L ++++L S F LI C E G I E+ + F K
Sbjct: 59 NRLGFAFSVLGDILKL--GYQPSTATFTTLIRGLCVE---------GKIGEALQLFDKMT 107
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
GFQP +++ L+NGL K + + ++ +M GI PN T++ L H C G
Sbjct: 108 GEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWK 167
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR---LNDAFYLYRIMYRRNVLPDLVTYT 314
+ + PD +T+NTL+ + CK+G ++ A L+ M ++ ++PD VTY
Sbjct: 168 EAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYN 227
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
TL++GLC G++R+A LFH MV G PD+V+Y L CK ++ E+ LL + G
Sbjct: 228 TLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGT 287
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
+ PD I++ G + G L +A +L +L G+ Y +I LCQ A
Sbjct: 288 NLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEA 347
Query: 435 TSLLERIGQD 444
+ L + ++
Sbjct: 348 SKLFGEMDEN 357
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 125/310 (40%), Gaps = 38/310 (12%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P +V ++ L++S + + LY+ M + + T L+N C ++ A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
++ G P ++ TLI C EGK+ E+ L +M G G PD T
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLT---------- 117
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
Y LI LC+D + A SL + G P+
Sbjct: 118 -------------------------YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFT 152
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR---SGEAVSLMD 509
Y+ L+ LC +A+ L M+ R I P T+ L+ C G +A+ L +
Sbjct: 153 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFE 212
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM + G++PD+ LI+G C + A AL QI D +Y +F+ ++
Sbjct: 213 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 272
Query: 570 DLSKLMELQK 579
L++ M L K
Sbjct: 273 RLAEAMVLLK 282
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++H L + A+++ ++ K P + F L+ C +
Sbjct: 146 ISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIH-RKIMPDQL-TFNTLVDAL--CKEGMI 201
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++ + ++ F + G P V+ N L++GL + + ++ EM G P+
Sbjct: 202 QI--MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLV 259
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL CKN + + L+ IE DPD+ Y+ ++ C+ G L A L+ +
Sbjct: 260 TYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKL 319
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+ + PD+ TYT ++NGLC++G + EA +LF M DI SY+T
Sbjct: 320 SSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN----DIESYST 364
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ S C + + A + +++ +PS +T+ LI C G+ GEA+ L D+M
Sbjct: 49 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 108
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G PD LING C ++ + +A +L K + +Y+++ + G +
Sbjct: 109 EGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKE 168
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + P+ LT ++ +L K
Sbjct: 169 AIRLFYAMIHRKIMPDQLTFNTLVDALCK 197
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 180/368 (48%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++V+ N L++GL K + ++EM G+ P+ T+N L + +CK G++ +
Sbjct: 330 GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQA 389
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ G P ++TYN LI YC+ G L A L M + LPD+ TYT LMNG
Sbjct: 390 LCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNG 449
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C + F M+ +GL PD +YNT I A G + + L EMM GI D
Sbjct: 450 SCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSD 509
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T T +++ G K G L A L +++ G+ + Y LI A C+ R A ++ +
Sbjct: 510 TVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFD 569
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G PS+ Y + + C+ ++ A +M++ ++P+ TY L+ C +G
Sbjct: 570 GMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMG 629
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R+ A EMLE G++P+ +LI+G C E + A L +K D ++N
Sbjct: 630 RTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHN 689
Query: 560 AVFNMFAE 567
A+F F E
Sbjct: 690 ALFKGFGE 697
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 184/414 (44%), Gaps = 3/414 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
+ F++ G P + CN +L L D VY +M ++G+ P+ T+N L
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236
Query: 248 HVFCKNGDVDKVNGFLEKIEEE--GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
FCK G +D+ L+ +E G P+ VTYN +I+ +KG L A L IM R +
Sbjct: 237 DSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLS 295
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
TY L+ GL V +A L M + G+ P +V+YNTLI K G + ++
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
EM G+ PD T ++ GY K G L AL L +L+R G+ + Y+ LI
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ A L E + ++ +P + Y LM C ++A + DEM+ + ++P
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDC 475
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y I IG A L +EM+ G+ D+ VLI+G C + A L
Sbjct: 476 FAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMK 535
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
D +Y + + E G L + + + G +P+ +T IH+
Sbjct: 536 MVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHT 589
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 176/348 (50%), Gaps = 2/348 (0%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ DLI+ N Y K G ++++ F G P++++ N L++G +L ++
Sbjct: 366 LLPDLITYNSLIN-GYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGA 424
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ EEM P+ T+ IL + C ++ V F +++ +G +PD YNT IS+
Sbjct: 425 RRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISA 484
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
G + +AF L M R + D VTY L++GLCK G +++A+ L+ +MV GL D
Sbjct: 485 ELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLD 544
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V+Y LI A+C+ G++ E+K++ M+ +G+ P T I + Y + G L A
Sbjct: 545 CVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFR 604
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ GV + Y+ L+ ALC+ R +A + + G VP+ Y L++ CK
Sbjct: 605 KMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEG 664
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ A+ L EM + I P T+ AL F G G +AV ++ ++
Sbjct: 665 NWVHAIRLYCEMHQKGIHPDHCTHNALFKGF-GEGHMYDAVQYLENVV 711
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 3/342 (0%)
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ G P + N ++ R +D +Y M + V P + TY TL++ CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241
Query: 323 EGKVREAHQLFHRMVHR--GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
G++ +A L M R G P+ V+YN +I ++G+++++ L+ ++M
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLSKKASA 300
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT ++ G + A L++E++ G+ + Y+ LI L + AA +
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ G +P L YN L+ CK ++ AL L ++ + P++ TY LI +C +G
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L +EM E LPD +L+NG CM +++ K D +YN
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNT 480
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G ++ +L++ + G + + +T +I L K
Sbjct: 481 RISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCK 522
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 215/481 (44%), Gaps = 17/481 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +I+ F A+++L +L H+ D+ +C N A
Sbjct: 192 PIPPMYHVILEAACRGGGFRSAVRVLEDL--------HARGCALDVGNCNLVLN-AICDQ 242
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW----QVYEEMGRIGICPN 239
G + E+ R G +P +VS N +L GL C+ + W ++ EEM R+ PN
Sbjct: 243 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL----CMAKRWGCVQELMEEMVRMACPPN 298
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TFN L C+NG ++V+ L ++ E G PD+ Y T+I CK+G L A +
Sbjct: 299 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 358
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + P++V Y TL+ GLC + E +L M + D V++N L+ +C+ G
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 418
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ LL +M+ +G PD T ++ G+ KEG + A+ L+ + G + Y
Sbjct: 419 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 478
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC R A L+ ++ Q G + +N L+ LCK V A+ L +M+
Sbjct: 479 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P L +Y +I G++ EA+ L++ M+ GM P++ I + + E +NK
Sbjct: 539 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ D YNAV + + G+ + +E + G PN T +I
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 658
Query: 600 L 600
L
Sbjct: 659 L 659
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 206/428 (48%), Gaps = 40/428 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS----------- 171
+P +Y ++ L ++ +++ E+V + CP ++ F LIS
Sbjct: 261 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA--CPPNIVTFNTLISYLCRNGLFERV 318
Query: 172 -----------CTEDCN-WAYVKVGLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLNG 214
CT D +A + G+ +E + + + G +P++V N LL G
Sbjct: 319 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 378
Query: 215 LLKLNCIDQCWQVYEEMGRIGI---CP-NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L C + W+ EE+ CP + TFNIL FC+NG VD+V LE++ E G
Sbjct: 379 L----CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD++TY T+I+ +CK+G +++A L + M P+ ++YT ++ GLC + +A
Sbjct: 435 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 494
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +M+ +G + +++NTLI CK+G ++++ LL +M+ NG PD + ++ G
Sbjct: 495 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 554
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
GK G+ AL L+ + G+S + IY + AL ++ R + + I QD + S
Sbjct: 555 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI-QDTTIRSD 613
Query: 451 EI-YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN ++ SLCK A+ MV P+ STY LI G EA ++
Sbjct: 614 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 673
Query: 510 EMLESGML 517
E+ G L
Sbjct: 674 ELCSKGAL 681
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 158/369 (42%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +T+ + C G + L+++ G P Y+ ++ + C+ G
Sbjct: 153 VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 212
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A + ++ R D+ ++N +C +G V EA L + G PD+VSYN ++
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 272
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 273 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 332
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN L++ LC + + L
Sbjct: 333 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 392
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM D++ T+ L+ FC G + L+++MLE G +PD +ING+C E
Sbjct: 393 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKE 452
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL +T SY V +L + ++ G N +T
Sbjct: 453 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 513 NTLINFLCK 521
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN +++ YC+ G+L A R+ V P+ TY ++ LC G++ +A + M
Sbjct: 130 YNAMVAGYCRAGQLESA---RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
RG +P Y+ ++ A C+ G + + +L ++ G D C +++ +G +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL+L+ +L FG Y+ ++ LC R L+E + + P++ +N L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ + +MV+ P + Y +I C G A +++ M G+
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ L+ G C + + E LL K D ++N + + F ++G + +++EL
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
++ L G P+ +T +I+ K
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCK 451
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 236/511 (46%), Gaps = 49/511 (9%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y +++ L + A ++L E+ E K +V F +I+ +VK GL+
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEMEE--KSISPNVVTFSSVIN-------GFVKRGLLD 431
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + R + G P++V+ L++G K D +VY +M G+ N + L
Sbjct: 432 KATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLV 491
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ +NG +++ + G D V Y TLI K G + AF + + RN+L
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD V Y +N LC GK +EA + M + GL PD +YNT+I ++C++G+ ++ L
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEG-------------------------RLLSA--- 399
L+EM + I P+ T +V G G R+L A
Sbjct: 612 LHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQ 671
Query: 400 ---LNLVVELQRF----GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
L++++++ + G+ +Y+ L+ LC AT +LE + G P
Sbjct: 672 SRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTIT 731
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+ CK + +A +M+ +NI P+++T+ L+ +GR GEA +++ EM
Sbjct: 732 FNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEME 791
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYNAVFNMFAEDGD 570
+SG+ P++ +L+ G+ K NK EA+ + K + +YNA+ + F + G
Sbjct: 792 KSGLEPNNLTYDILVTGH--GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+++ EL K + G P + T ++ S W
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILV-SGW 879
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 223/513 (43%), Gaps = 52/513 (10%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P YC ++ LA + + +L E+V S V DL++ T +W K
Sbjct: 307 PNHVTYCTLIDSLAKAGRGKELLSLLGEMV--------SRGVVMDLVTYTALMDW-LGKQ 357
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E T R L + V+ L++ L K + +D+ QV EM I PN TF
Sbjct: 358 GKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTF 417
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK---------------- 287
+ + + F K G +DK + ++E G +P++VTY TLI + K
Sbjct: 418 SSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLC 477
Query: 288 -------------------KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G++ +A L++ + D V YTTL++GL K G +
Sbjct: 478 EGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + ++ R + PD V YN I C GK +E+KS+L EM G+ PD T ++
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIV 597
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ ++G AL L+ E++ + + Y+ L+ L A LL + G+ P
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S + ++++ + + L + + M++ + ++ Y L+ C G + +A ++
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+EML SG+ PD+ LI G+C ++ A A + + ++N +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 569 GDLSK----LMELQKRFLRLGFAPNNLTCKYMI 597
G + + L+E++K G PNNLT ++
Sbjct: 778 GRIGEAGTVLIEMEKS----GLEPNNLTYDILV 806
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 193/420 (45%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E+F + + G +V+ + L+ GL + + + ++ EM ++G PN
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPN 308
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L K G ++ L ++ G DLVTY L+ K+G+ ++ R
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR 368
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
N+ + VTYT L++ LCK V EA Q+ M + +SP++V+++++I + K G
Sbjct: 369 FALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRG 428
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ M GI P+ T ++ G+ K +AL + ++ GV +++ I D
Sbjct: 429 LLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVD 488
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L Q+ + A +L + G Y L++ L K + A E++DR
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P Y I C C +G+ EA S++ EM G+ PD +I +C + + KA
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL + +YN + G + K L + GF+P++LT + ++ +
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 185/400 (46%), Gaps = 8/400 (2%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
++ N L+ G ++ V + M G+ + +N L FC+ G VD G L+
Sbjct: 169 VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++E G DP++ TY I YC+ + +AF LY M R VL D+VT + L+ GLC++G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ EA+ LF M G P+ V+Y TLI + K G+ +E SLL EM+ G+ D T
Sbjct: 289 RFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFG----VSISRDIYDYLIVALCQDNRPFAATSLLER 440
++ GK+G+ + V + RF +S++ Y LI ALC+ + A +L
Sbjct: 349 ALMDWLGKQGK----TDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLE 404
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + P++ ++ ++ K + A K M +R I P++ TY LI F
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A+ + +ML G+ + I L+NG + +A AL + D +Y
Sbjct: 465 QDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + GD+ + + + P+ + I+ L
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 169/365 (46%), Gaps = 4/365 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P T +NIL + V L ++ + G D VT NTL++ C+ G+++ A L
Sbjct: 101 PTTVAYNILLAALSDHAHAPAV---LAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ L D++ + TL+ G C+ G A + RM +GL D+V YNTL+ +C+
Sbjct: 158 ADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCR 216
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ ++ +L M G+ P+ T + Y + + A +L + R GV +
Sbjct: 217 AGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVT 276
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
L+ LC+D R A +L + + G VP+ Y L++SL K + L L EMV
Sbjct: 277 LSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMV 336
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R + L TY AL+ G++ E + L + + VLI+ C +V+
Sbjct: 337 SRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVD 396
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+AE +L +K + ++++V N F + G L K E ++ G PN +T +I
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456
Query: 598 HSLWK 602
+K
Sbjct: 457 DGFFK 461
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 39/329 (11%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+P++++ N L+ GL +++ + EM G P++ T + ++ +D +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
E + G D+ YNTL+ C G A + M + PD +T+ L+ G
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK + A + +M+H+ +SP+I ++NTL+ G++ E+ ++L EM +G+ P+
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T I+V G+GK+ + A+ L E+
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCEM---------------------------------- 825
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+G+ G+VP + YN L+ K + A L +M R + P+ TY L+ + I
Sbjct: 826 VGK-GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRN 884
Query: 501 SGEAVSLMDEMLESGMLPD----SQICRV 525
E + +M E G P S ICR
Sbjct: 885 GTEVKKCLKDMKEKGFSPSKGTLSFICRA 913
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 225/529 (42%), Gaps = 83/529 (15%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D I P Y LI+ L + A ++L ++VE P+S+ + LI
Sbjct: 273 DSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE-AGTRPNSI-TYNSLIH------- 323
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK------LNCI----------- 221
Y G+ ES + F++ G P++ +CN ++ L K CI
Sbjct: 324 GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKP 383
Query: 222 -------DQCW--------------QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ W ++ M GI PN H FNIL + + + G +DK
Sbjct: 384 DIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAM 443
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY------- 313
E ++ +G PD VT+ T+ISS C+ GRL+DA + + M V P Y
Sbjct: 444 LIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGC 503
Query: 314 -----------------------------TTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
++++N LCKEG+V E + MV G P+
Sbjct: 504 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPN 563
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V++N+L+ YC G M+E+ +LL M GI P+ + +V GY K GR+ AL +
Sbjct: 564 VVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFR 623
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ GV + +Y ++ L Q R AA + + + G S+ Y ++ LC+ +
Sbjct: 624 DMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNN 683
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+A +L +++ N+K + T+ +I +GR EA L D + G++P+ Q
Sbjct: 684 CTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYS 743
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
++I E+ +A+ L K D+ N + M +++K
Sbjct: 744 MMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAK 792
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 191/401 (47%), Gaps = 39/401 (9%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+ +VK G + ++ F + ++ G P I+ CN ++ L K+ +D+ + ++M GI
Sbjct: 218 YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIA 277
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T++++ CK+ +DK LE++ E G P+ +TYN+LI Y G N++ +
Sbjct: 278 PDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRV 337
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT------- 350
++ M V+P + + ++ L K G+ EA +F MV +G PDI+SY+T
Sbjct: 338 FKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCY 397
Query: 351 -------------------------------LIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LI AY + G M ++ + +M G+ PD
Sbjct: 398 WYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 457
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL- 438
T T ++ + GRL AL+ + GV S +Y LI C A L+
Sbjct: 458 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 517
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + +D P ++ ++ ++ +LCK VA+ + D MV +P++ T+ +L+ +C +
Sbjct: 518 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 577
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
G EA +L+D M G+ P+ I L++GYC ++ A
Sbjct: 578 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 618
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 200/418 (47%), Gaps = 19/418 (4%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+I + N L++ +++ D + + + G+ P+ +++ L + F K+G+VDK +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E+G P ++ N++I CK ++ A + + M + PDL TY+ +++GLCK
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ +A ++ +MV G P+ ++YN+LI Y G ES + +M G+ P
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352
Query: 383 CQIIVQGYGKEGRLLSAL----NLVV-----ELQRFGVSISRDIYDYLIVALCQDNRPFA 433
C + K GR A ++V+ ++ + + S Y Y+ V + F
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIF- 411
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
+L + G P+ ++N L+ + +C + A+L+ ++M ++ + P T+ +I
Sbjct: 412 -NLMLTK----GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 466
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQI 552
C IGR +A+ + M++ G+ P + LI G C ++ KA+ L+ K
Sbjct: 467 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 526
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS--LWKGMERKF 608
+ ++++ N ++G +++ ++ ++ G PN +T ++ L ME F
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 584
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + ++N L K + + + + M + G PN TFN L +C G++++
Sbjct: 527 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 586
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +P+ Y TL+ YCK GR++DA ++R M + V P V Y+ +++GL +
Sbjct: 587 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 646
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G + I +Y ++ C+ E+ LL ++ + D T
Sbjct: 647 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 706
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ K GR A L + +G+ + Y +I L ++ A +L +
Sbjct: 707 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 766
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G+ + N ++ L VA A + + N+ ST L F G+
Sbjct: 767 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 826
Query: 503 EAVSLM 508
E + L+
Sbjct: 827 EHIKLL 832
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 109/231 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L G +P+ V + +L+GL + +++ EM G
Sbjct: 608 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 667
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ ++ C+N D+ N LEK+ D++T+N +IS+ K GR +A L+
Sbjct: 668 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 727
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P++ TY+ ++ L KE EA LF + G + D N ++ +
Sbjct: 728 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 787
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ ++ + L + N + + T ++ + +EG+ + L+ +F
Sbjct: 788 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLLPAKYQF 838
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 39/170 (22%)
Query: 479 RNIKPSLSTYRALICCF------------------CGIG-------------RSGE---A 504
R+ P++ TY LI C+ G+G + GE A
Sbjct: 170 RHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKDGEVDKA 229
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L EM+E G+LP IC +I C K+++KAE+++ D +Y+ + +
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH-----SLWKGMERKFQ 609
+ + K + ++ + G PN++T +IH +W R F+
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 26/208 (12%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP-HSVDVFQDLI---SCTEDCN 177
+KPTS Y +I+H L + + A KM E++E H+ V + +CT++ N
Sbjct: 630 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 689
Query: 178 W----------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
A KVG +E+ + F G P+I + + ++ L
Sbjct: 690 MLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 749
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K ++ ++ + + G ++ N + + +V K + +L I E +
Sbjct: 750 IKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEA 809
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYR 303
T + L S + ++G+ + L Y+
Sbjct: 810 STISLLASLFSREGKYREHIKLLPAKYQ 837
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 198/407 (48%), Gaps = 4/407 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP+ +S N ++ L ++ +DQ +V+ M + +T++ L H C G +D+
Sbjct: 172 QPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVS 231
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L++++ EG P+ V +N LIS+ CKKG L+ A L M+ + +P+ VTY +L++GLC
Sbjct: 232 LLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLC 291
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+GK+ +A L +RMV P+ +++ TL+ + K G+ + +L + G + F
Sbjct: 292 LKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEF 351
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ ++ G KEG+ + L E+ G + +Y LI LC++ +P A L +
Sbjct: 352 SYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEM 411
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G+ P+ Y+ LM + + A+L+ EM D + Y LI C G+
Sbjct: 412 KNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKL 471
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF---AKKFQIYDTESY 558
EA+ + +ML G+ D +I+G+C + V + L K Q D +Y
Sbjct: 472 KEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP-DVVTY 530
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
N + N F +S+ +++ L G P+ +TC + +L M+
Sbjct: 531 NILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMD 577
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 170/362 (46%), Gaps = 32/362 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +VH L K AM +L +V C + F L+ +VK
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMV--ANKCVPNDITFGTLVD-------GFVKH 328
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + G++ + S + L++GL K + Q+++EM G PNT +
Sbjct: 329 GRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVY 388
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L C+ G D+ +L +++ +G P+ TY++L+ Y + G ++ A +++ M
Sbjct: 389 SALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTD 448
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ V Y+ L+NGLCK GK++EA ++ +M+ RG+ D+V+Y+++I +C +++
Sbjct: 449 NDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQ 508
Query: 364 SKSLLYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS---ISRDIY 418
L +M+ + + PD T I++ + + + A++++ + G I+ DI+
Sbjct: 509 GMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIF 568
Query: 419 ------------------DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
D L+V L + R A++++E + Q +P + ++ L
Sbjct: 569 LKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQL 628
Query: 461 CK 462
CK
Sbjct: 629 CK 630
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 30/195 (15%)
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
DC H + LI+ K G ++E+ +++ L G + +V+ + +++G
Sbjct: 450 DCNHHEVCYSILIN-------GLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCN 502
Query: 218 LNCIDQCWQVYEEM--GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++Q +++ +M + P+ T+NIL + FC V + L + ++G DPD
Sbjct: 503 AQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDF 562
Query: 276 VT---------------------YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+T + L+ K+ R A + +M ++ +LP T+
Sbjct: 563 ITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWA 622
Query: 315 TLMNGLCKEGKVREA 329
+ LCK KVR+
Sbjct: 623 LAVQQLCKPMKVRKT 637
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 197/410 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + + +VG +PS L LL++ W++++++ R G P +TF+ +
Sbjct: 4 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FC+ G + L + + +P+ YN +I++ C +GR +DA + +M R
Sbjct: 64 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P +VT+ T++N CKEG V EA +LF + G SP+ + YNTL+ Y K ++ ++ L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM GI PD T I+V G+ K GR L+ ++ G+ R ++D + LC
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A L + + G PS+ +N ++ + + A MV + PS ST
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
+L+ GR EA L+ +M+E G+ ++ VL++ + DV A++L G
Sbjct: 304 CSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEME 363
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
++ D +++A + ++ G + + + LR G PNN +I
Sbjct: 364 RRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 413
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 216/456 (47%), Gaps = 44/456 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y ++++ + S A+ ++E + C +V F +I+ A+ K
Sbjct: 88 EPNAFAYNIVINACCIRGRTSDALAWFNLMIE--RGCNPTVVTFNTVIN-------AFCK 138
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ K F ++GF P+ + N L+NG +K+ IDQ +YEEM + GI P+ T
Sbjct: 139 EGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT 198
Query: 243 FNIL-----------------------------------THVFCKNGDVDKVNGFLEKIE 267
FNIL C G +D+ FL +
Sbjct: 199 FNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDML 258
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
E+G P ++ +N++I++Y + G + AF Y++M + P T ++L+ GL G+++
Sbjct: 259 EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 318
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA +L +M+ +GLS + +++ L+ + K G + ++SL EM GI+PD +
Sbjct: 319 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 378
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G K+G + A N+ +E+ R G+ + Y+ LI C+ + A L + + G +
Sbjct: 379 DGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLL 438
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P + N ++ LCK + A+ + +M + P + TY LI +C A +L
Sbjct: 439 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 498
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ M SG PD + I+G+C + +N+A +L
Sbjct: 499 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLML 534
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 198/417 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ F ++ G P++V+ N ++N K + + ++++ + +G PN +
Sbjct: 105 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 164
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + + K ++D+ N E++ ++G PD +T+N L+S + K GR D L + +
Sbjct: 165 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 224
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+LPD + ++GLC G++ EA + M+ +GLSP I+++N++I AY + G +
Sbjct: 225 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 284
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ M+ G+ P TC ++ G GRL A L+ ++ G+S++ + L+
Sbjct: 285 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 344
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ A SL + + G P + ++ ++ L K V +A + EM+ + + P
Sbjct: 345 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 404
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +LIC FC G+ EA+ L M G+LPD ++I G C + + A +
Sbjct: 405 NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 464
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D +YN + N + + D+ L R G P+ T IH
Sbjct: 465 MDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 521
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 162/312 (51%), Gaps = 5/312 (1%)
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
IS + C WA G + E+ + L+ G PSI++ N ++ + D+ ++ Y+
Sbjct: 236 ISVSGLC-WA----GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 290
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
M G+ P+ T + L NG + + + ++ E+G + + + L+ + K+G
Sbjct: 291 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 350
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ A L+ M RR + PD+V ++ ++GL K+G V EA+ +F M+ +GL P+ +YN
Sbjct: 351 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 410
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
+LI +CK GK+ E+ L M G+ PD FT +I+ G K+GR+ SA+N+ +++ +
Sbjct: 411 SLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT 470
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+S Y+ LI C+ A +L+ R+ G P L YN + C + A
Sbjct: 471 GLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 530
Query: 470 LLLKDEMVDRNI 481
+L+ DE+V I
Sbjct: 531 VLMLDELVSAGI 542
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 160/326 (49%), Gaps = 9/326 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L + P S + + V L W + AM+ L +++E K S+ F +I+ A
Sbjct: 225 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLE--KGLSPSIIAFNSVIA-------A 275
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + GL ++F+ ++ + G PS +C+ LL GL + + ++ +M G+ N
Sbjct: 276 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVN 335
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
F +L F K GDV ++E G PD+V ++ I K+G + +A+ ++
Sbjct: 336 NMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFL 395
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R+ ++P+ Y +L+ G CK GK+ EA +L M HRGL PDI + N +I CK+G
Sbjct: 396 EMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 455
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M+ + ++ +M G+ PD T ++ GY K +++A NLV + G + Y+
Sbjct: 456 RMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYN 515
Query: 420 YLIVALCQDNRPFAATSLLERIGQDG 445
I C R A +L+ + G
Sbjct: 516 IRIHGFCSSRRMNRAVLMLDELVSAG 541
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 200/425 (47%), Gaps = 6/425 (1%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
++VG +K F+ + G QP + + ++ G + CI + M + PN
Sbjct: 32 LRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNA 91
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+NI+ + C G + + E G +P +VT+NT+I+++CK+G + +A L+
Sbjct: 92 FAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDG 151
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ P+ + Y TLMNG K ++ +A+ L+ M +G++PD +++N L+ + K G+
Sbjct: 152 LKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGR 211
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ LL ++ G+ PD I V G GRL A+ ++++ G+S S ++
Sbjct: 212 EEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNS 271
Query: 421 LIVALCQ---DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+I A Q +++ F A L+ G PS + L+ L + +A L +M+
Sbjct: 272 VIAAYSQAGLEDKAFEAYKLMVHF---GLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 328
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ + + + L+ F G A SL EM G+ PD I+G + V
Sbjct: 329 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 388
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A + +K I + +YN++ F + G L++ ++L+K G P+ T +I
Sbjct: 389 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 448
Query: 598 HSLWK 602
L K
Sbjct: 449 GGLCK 453
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +V+ + ++GL K +++ + V+ EM R G+ PN +N L FCK G +++
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ + G PD+ T N +I CK+GR+ A ++ M++ + PD++TY TL+NG
Sbjct: 426 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 485
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK + A L +RM G +PD+ +YN I +C +M + +L E++ GI
Sbjct: 486 YCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSF 545
Query: 380 TFTCQIIVQGYGKE 393
+F C + + K
Sbjct: 546 SFACPPTLNAHTKH 559
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%)
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
F A +L R+ + G PS L + L + + L +++ R +P T+ +
Sbjct: 3 FQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGI 62
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I FC G SL+ M + P++ ++IN C+ + A A ++
Sbjct: 63 ILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGC 122
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++N V N F ++G++ + +L +GF+PN + +++ K E
Sbjct: 123 NPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMRE 176
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 191/400 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++VS + ++NG +D+ + ++ EM GI P+ T+ + CK D+
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ + G P++ TYN LI Y G+ + + M P+ TY +L+N LCK
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ REA F M+ +G+ P + +Y ++ Y +G + E LL M+ NGI P+
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I Y K G + A+++ ++++ G+S Y LI ALC+ R A ++
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P + +++ L+ LC D L EM++ I P++ + ++C C GR
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
E L+D + G+ PD LI+G+C+ +++A LL D+ SYN +
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G + ++ L G P +T ++H L++
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQ 600
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 133/584 (22%), Positives = 251/584 (42%), Gaps = 76/584 (13%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKN 118
N++++ +C + G++ LLQ +P LG C D+VS +N +
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQR-----MPELG----------CMPDTVS----YNILLK 173
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
L + + ++H++A + +S CP +V + +I+
Sbjct: 174 GLCNEKRAEEALELLHMMADDQVWS---------------CPPNVVSYSTVIN------- 211
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ G + + + F + +D G P +V+ +++GL K D+ V+++M G+ P
Sbjct: 212 GFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L H + G +V LE++ G P+ TY +L++ CK GR +A + +
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFF 331
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL-------------------------- 332
M + + P + TY +++G +G + E H L
Sbjct: 332 DSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKC 391
Query: 333 ---------FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
F++M +GLSPD VSY LI A CK G++ +++ +M+ G+ PD
Sbjct: 392 GIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVF 451
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+V G + L E+ G+ + ++ ++ LC++ R L++ I
Sbjct: 452 SSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIEC 511
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G P + YN L++ C ++ +A L + MV +KP +Y L+ +C GR
Sbjct: 512 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDS 571
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A S +ML +G+ P +++G K ++A+ L +D +YN + N
Sbjct: 572 AYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILN 631
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + + +++ + G N +T MI +L KG ++
Sbjct: 632 GLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKE 675
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 194/427 (45%), Gaps = 35/427 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G RE+ F + G +PS+ + +L+G + + + M GI PN H
Sbjct: 320 KNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHH 379
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FNI + K G +DK K+ ++G PD V+Y LI + CK GR++DA + M
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439
Query: 302 YRRNVLPDLVTYTTLMNG-----------------------------------LCKEGKV 326
V PD+V +++L+ G LCKEG+V
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRV 499
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E +L + G+ PD++SYNTLI +C G + E+ LL M+ G+ PD+F+ +
Sbjct: 500 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTL 559
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K GR+ SA + ++ G++ Y+ ++ L Q R A L + G
Sbjct: 560 LHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 619
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+ YN ++ LCK + V +A+ + + + ++ ++ T+ +I GR +A+
Sbjct: 620 KWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMD 679
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L + +G++ + R+++ E + + ++L K +++ NA+
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 739
Query: 567 EDGDLSK 573
GD+S+
Sbjct: 740 HRGDISR 746
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 206/449 (45%), Gaps = 13/449 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IKP+ + Y +++H A S +L +V H + F S AY
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI--FNIFFS-------AYA 389
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+I ++ F K G P VS L++ L KL +D + +M G+ P+
Sbjct: 390 KCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIV 449
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+ L + C +KV ++ G P++V +NT++ + CK+GR+ + L +
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI 509
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V PD+++Y TL++G C G + EA +L MV GL PD SYNTL+ YCK G++
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ S +M+ NGI P T I+ G + R A L + + G DIY Y
Sbjct: 570 DSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW--DIYTYN 627
Query: 422 IV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I+ LC+ N A + + + G ++ +N ++ +L K DA+ L +
Sbjct: 628 IILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 687
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ ++ TYR ++ G E SL M ++G P+SQ+ L+ D+++A
Sbjct: 688 GLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 747
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAED 568
A L ++ + + + + ++F+ D
Sbjct: 748 GAYLSKLDERNFSVEASTTSMLISIFSSD 776
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 195/430 (45%), Gaps = 28/430 (6%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G +P ++S N L++G ID+ ++ E M +G+ P++ ++N L H +CK G +D
Sbjct: 512 MGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDS 571
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
K+ G P +VTYNT++ + R ++A LY M D+ TY ++N
Sbjct: 572 AYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILN 631
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK V EA ++F + +GL +I+++N +I A K G+ +++ L + NG+
Sbjct: 632 GLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQ 691
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ----------- 427
+ T +++V+ +EG L +L +++ G + + + + L+ L
Sbjct: 692 NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYL 751
Query: 428 ---DNRPFA----ATSLLERI-GQDGY------VPS-LEIYNELMES--LCKCDSVADAL 470
D R F+ TS+L I D Y +P I NE S + K + DA
Sbjct: 752 SKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAY 811
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM+ + + P + TY ++ GR EA L M+ S + +++NG
Sbjct: 812 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGL 871
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C V++A + K + ++N + + G M+L G P+
Sbjct: 872 CKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDV 931
Query: 591 LTCKYMIHSL 600
+T + + +L
Sbjct: 932 VTYRLVAENL 941
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 173/384 (45%), Gaps = 9/384 (2%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
I + PN T++IL FC+ G ++ I + G+ D + N L++ C R+ +
Sbjct: 88 IKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGE 147
Query: 294 AF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL---SPDIVSYN 349
A L + M +PD V+Y L+ GLC E + EA +L H M + P++VSY+
Sbjct: 148 AMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYS 207
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T+I + EG++ + +L EMM GI PD T ++ G K A + ++
Sbjct: 208 TVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN 267
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
GV + D Y+ LI + +LE + G P+ Y L+ LCK +A
Sbjct: 268 GVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREA 327
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
D M+ + IKPS++TY ++ + G E L++ M+ +G+ P+ I + +
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSA 387
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
Y ++KA + ++ D SY A+ + + G + + + G P+
Sbjct: 388 YAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPD 447
Query: 590 NLTCKYMIHSL-----WKGMERKF 608
+ +++ L W+ +E F
Sbjct: 448 IVVFSSLVYGLCTVDKWEKVEELF 471
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 179/423 (42%), Gaps = 28/423 (6%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FRK L G P +V+ N +L+GL + + ++Y M G
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+NI+ + CK+ VD+ + + +G +++T+N +I + K GR DA L+
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++ ++VTY ++ L +EG + E LF M G +P+ N L+
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR 741
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG--------------------------- 391
G + + + L ++ + T +++ +
Sbjct: 742 GDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALI 801
Query: 392 -KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K R+ A +L E+ G++ Y+ ++ L Q R A L + ++
Sbjct: 802 KKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNI 861
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN ++ LCK + V +A + + + ++ ++ T+ +I GR +A+ L
Sbjct: 862 YTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAA 921
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+ +G++PD R++ E + + + L K D+ NA+ + GD
Sbjct: 922 IPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGD 981
Query: 571 LSK 573
+S+
Sbjct: 982 ISR 984
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 166/425 (39%), Gaps = 89/425 (20%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE----------------LVKD--CPHSV 163
I P Y I+H L +FS A ++ ++ L K ++
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI 643
Query: 164 DVFQDLISCTEDCN--------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+FQ+L S N A +K G ++ F G ++V+ ++ L
Sbjct: 644 KMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENL 703
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++ +++ ++ M + G PN+ N L GD+ + +L K++E F +
Sbjct: 704 IEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEA 763
Query: 276 VTYNTLISSYC----------------------------KKGRLNDAFYLYRIMYRRNVL 307
T + LIS + K R++DA+ L+R M + +
Sbjct: 764 STTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLT 823
Query: 308 PDLVTYTT-----------------------------------LMNGLCKEGKVREAHQL 332
PD+VTY T ++NGLCK V EA ++
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F + +GL +I+++N +I A K G+ +++ L + NG+ PD T +++ + +
Sbjct: 884 FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
EG L L + +++ G + + + L+ L Q A + L ++ + +
Sbjct: 944 EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAST 1003
Query: 453 YNELM 457
+EL+
Sbjct: 1004 TSELI 1008
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
ID + ++ EM G+ P+ T+N + H + G + + ++ TYN
Sbjct: 807 IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK +++AF +++ + + + +++T+ ++ L K G+ +A LF + G
Sbjct: 867 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L PD+V+Y + +EG ++E L M +G D+ +V+ + G + A
Sbjct: 927 LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
+ +L S+ LI + A SL E+
Sbjct: 987 AYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEK 1026
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G E+ + + ++ Q +I + N +LNGL K NC+D+ +++++ + G+ N
Sbjct: 838 QTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 897
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNI+ K G + I G PD+VTY + + ++G L + L+ M
Sbjct: 898 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTM 957
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ D L+ L + G + A ++ + S + + + LI + +
Sbjct: 958 EKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQ 1017
Query: 362 QESKSL 367
+KSL
Sbjct: 1018 HHAKSL 1023
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 49/109 (44%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A +K G ++ F G P +V+ + L++ +++ ++ M + G
Sbjct: 905 ALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPL 964
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++ N L + GD+ + +L K++E+ F + T + LIS + +
Sbjct: 965 DSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSR 1013
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 213/448 (47%), Gaps = 6/448 (1%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H DV Q + C K ++++ + + G P S FL+N L K
Sbjct: 93 HKPDVVQATQLLYDLC-----KSNKMKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGN 147
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ Q+ E+M G NT T+N L C +G+++K FL+++ ++G P+ TY++
Sbjct: 148 VGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSS 207
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ + K+ +N+A L + + P+LV+Y L+ GLCKEG++ EA +LF + +G
Sbjct: 208 LLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKG 267
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
SP++VSYN L+ + C EG+ +E+ LL EM G P T I++ G++ AL
Sbjct: 268 FSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQAL 327
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ E+ + Y+ +I LC++ + A + L+++ P+ +N + L
Sbjct: 328 QVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAI-AVL 386
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C V +A L + ++ Y+ ++ C C G + A L+ EM + G PDS
Sbjct: 387 CYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDS 446
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LI G C+E + +A + + D +++NA+ F + +E+ +
Sbjct: 447 YTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEM 506
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ G+ P+ T ++ + E++
Sbjct: 507 MIEKGYTPSETTYTILVEGIIHEEEKEL 534
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 231/501 (46%), Gaps = 52/501 (10%)
Query: 94 EISRVLLRCQ---SDSVSALTFFNWV--KNDLEIKP--TSSNYCLIVHILAWNNKFSF-- 144
+ +RVL Q S S +T NW KND + S + + HI+ +K
Sbjct: 40 DFTRVLASTQITISPKDSVITLPNWRSGKNDQRNRDMRISDAFFHLEHIVKNGHKPDVVQ 99
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISC---TEDCNWAYV-----KVGLIRESFKTFRKT 196
A ++L +L + K ++ V + +ISC + ++ ++ K G + + + K
Sbjct: 100 ATQLLYDLCKSNK-MKKAIRVMEMMISCGIIPDAASYTFLVNHLCKRGNVGYAMQLVEKM 158
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
D G+ + V+ N L+ GL +++ Q + + + G+ PN T++ L K V
Sbjct: 159 EDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGV 218
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
++ L++I +G P+LV+YN L++ CK+GR+ +A L++ + + P++V+Y L
Sbjct: 219 NEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNIL 278
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ LC EG+ EA++L M R SP IV+YN LI + GK++++ ++ EMM
Sbjct: 279 LRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPF 338
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVEL------------------------------ 406
P + I+ KEG++ + +N + ++
Sbjct: 339 KPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSL 398
Query: 407 -QRFGVSISRDIYDY---LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
Q G + I+DY ++ LC+ + A LL + + G+ P Y+ L+ LC
Sbjct: 399 IQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCI 458
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A+ + + + + +P + + ALI FC R+ ++ + + M+E G P
Sbjct: 459 EGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETT 518
Query: 523 CRVLINGYCMEKDVNKAEALL 543
+L+ G E++ A +L
Sbjct: 519 YTILVEGIIHEEEKELAAEVL 539
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 141/348 (40%), Gaps = 47/348 (13%)
Query: 252 KNGDVDKVNGF--LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
+N D+ + F LE I + G PD+V L+ CK ++ A + +M ++PD
Sbjct: 72 RNRDMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPD 131
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+YT L+N LCK G V A QL +M G + V+YNTL+ C G + +S L
Sbjct: 132 AASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLD 191
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M G+ P+ FT Y L+ A ++
Sbjct: 192 RLMQKGLVPNAFT-----------------------------------YSSLLEAAYKER 216
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A LL+ I G P+L YN L+ LCK + +A+ L + + P++ +Y
Sbjct: 217 GVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYN 276
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-----EALLG 544
L+ C GR EA L+ EM P +LI + +A E ++G
Sbjct: 277 ILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMG 336
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
F SYN + ++G + ++ + + +PN T
Sbjct: 337 PFKPT-----ATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGT 379
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)
Query: 326 VREAHQLFH--RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
+R + FH +V G PD+V L++ CK KM+++ ++ M+ GI PD +
Sbjct: 76 MRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASY 135
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+V K G + A+ LV +++ G + Y+ L+ LC + L+R+ Q
Sbjct: 136 TFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQ 195
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G VP+ Y+ L+E+ K V +A+ L DE++ + +P+L +Y L+ C GR E
Sbjct: 196 KGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEE 255
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ L + G P+ +L+ C E +A LL + + +YN +
Sbjct: 256 AIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIG 315
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
A G + + +++ + F P + +I L K
Sbjct: 316 SLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCK 354
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 17/232 (7%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-------LNCIDQCWQVYEEMGRIGI 236
G I ++ + + + F+P+ S N ++ L K +NC+DQ G
Sbjct: 321 GKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMI--------FGR 372
Query: 237 C-PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
C PN TFN + V C G V + ++ + + Y ++S CKKG AF
Sbjct: 373 CSPNEGTFNAIA-VLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAF 431
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M + PD TY++L+ GLC EG + EA ++F + PDI ++N LI +
Sbjct: 432 LLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGF 491
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
CK + S + M+ G P T I+V+G E A ++ EL
Sbjct: 492 CKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELH 543
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 1/239 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV+ N L+ L I+Q QV +EM P ++N + CK G V+ V
Sbjct: 305 PSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNC 364
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+++ P+ T+N I+ C +G++ +AF L + + + Y +++ LCK
Sbjct: 365 LDQMIFGRCSPNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCK 423
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G A L + M G +PD +Y++LI C EG + E+ + + + PD
Sbjct: 424 KGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDN 483
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
++ G+ K R +L + + G + S Y L+ + + A +L +
Sbjct: 484 FNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLREL 542
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 195/392 (49%), Gaps = 30/392 (7%)
Query: 170 ISCTEDCNWAYVK----VGLIRESFKTF-RKTLDVGFQPSIVSCNFLLN----------- 213
I C +D + ++ G R + KTF R + QPS+ N LLN
Sbjct: 82 IKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLV 141
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
G NC D + G+ PN +FNIL CK DV+ +++ G P
Sbjct: 142 GSTLKNCKD----------KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIP 191
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+LVTY T++ + +G L +A ++ + + LPD TYT LM G CK+G++ +A ++
Sbjct: 192 NLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVM 251
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M + G+ P+ V+Y +I AYCKE K E+++L+ +M+ P + C ++ ++
Sbjct: 252 DNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCED 311
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G++ +A +L + I LI LC++ + + A L + Q G +PSL Y
Sbjct: 312 GKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQ-GTIPSLMTY 370
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ +C+ + +A L D+MV++ +P+ TY LI F G E V +++EML+
Sbjct: 371 NTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLD 430
Query: 514 SGMLPDSQICRVLINGY---CMEKDVNKAEAL 542
+G LP+ +LI G ME DV+K ++
Sbjct: 431 NGCLPNKSTYTLLIEGLQESGMEGDVDKVMSM 462
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 167/344 (48%), Gaps = 5/344 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ N L +VF +N V L+ +++ G P++ ++N LI + CKK + +A
Sbjct: 120 PSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALK 179
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++P+LVTYTT++ G G + A ++F + +G PD +Y L+ YC
Sbjct: 180 VFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYC 239
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K+G++ ++ ++ M NG+ P+ T +++ Y KE + A NL+ ++ S
Sbjct: 240 KQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSST 299
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ +I LC+D + A L +R+ + +P I + L+ LCK V +A L DE
Sbjct: 300 LCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEF 359
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I PSL TY LI C G EA L D+M+E P++ +LI G+ V
Sbjct: 360 EQGTI-PSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVV 418
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAE---DGDLSKLMEL 577
+ +L + + +Y + E +GD+ K+M +
Sbjct: 419 KEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSM 462
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 164/341 (48%), Gaps = 3/341 (0%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLN-DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
EE P + NTL++ + + R + L + VLP++ ++ L+ LCK+
Sbjct: 114 EEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKND 173
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V A ++F M G+ P++V+Y T++ + G + ++ + E+ G PD T +
Sbjct: 174 VENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTV 233
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ GY K+GRL A+ ++ ++ GV + Y +I A C++ + A +L++ +
Sbjct: 234 LMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKK 293
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
++PS + ++++ LC+ V +A L M+++N P + LI C G+ EA
Sbjct: 294 FLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEAR 353
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L DE E G +P LI G C ++N+A L +K + +YN + F
Sbjct: 354 KLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGF 412
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK-GME 605
+ G + + + + + L G PN T +I L + GME
Sbjct: 413 MKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGME 453
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 44/352 (12%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F +K + ++P+ ++++ N ++ L K+C V +
Sbjct: 105 ALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTL-------KNCKDKYGVLPN 157
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+ S A K + + K F + +G P++V+ +L G + + +V+
Sbjct: 158 VFSFNILIK-ALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVF 216
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E+ G P+ T+ +L +CK G + ++ +E G +P+ VTY +I +YCK+
Sbjct: 217 SEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKE 276
Query: 289 -----------------------------------GRLNDAFYLYRIMYRRNVLPDLVTY 313
G++ +A +L++ M +N LPD
Sbjct: 277 KKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIM 336
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+TL++ LCKEGKV EA +LF +G P +++YNTLI C+ G++ E+ L +M+
Sbjct: 337 STLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVE 395
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
P+ FT ++++G+ K G + + ++ E+ G ++ Y LI L
Sbjct: 396 KRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 3/326 (0%)
Query: 280 TLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
++I +Y GR A + RI ++ P + TL+N + +
Sbjct: 91 SVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKD 150
Query: 339 R-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+ G+ P++ S+N LI A CK+ ++ + + EM G+ P+ T I+ G+ G L+
Sbjct: 151 KYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLV 210
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+A + E+ G Y L+V C+ R A +++ + +G P+ Y ++
Sbjct: 211 NAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMI 270
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
++ CK +A L D+M+D+ PS + +I C G+ A L MLE L
Sbjct: 271 DAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCL 330
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD+ I LI+ C E V +A L F ++ I +YN + E G+L++ L
Sbjct: 331 PDNAIMSTLIHWLCKEGKVWEARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRL 389
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ PN T +I K
Sbjct: 390 WDDMVEKRCRPNAFTYNMLIKGFMKA 415
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 208/428 (48%), Gaps = 35/428 (8%)
Query: 147 KMLCELVELVKDCPHSVDVFQDL-----------ISCTEDCNWAYVKVGLIRESFKTFRK 195
K+L LV+L K P + +F L +S +C Y +G +R +F F K
Sbjct: 76 KILSSLVKL-KHYPTVISLFYQLEFNGIKPNIVSLSILINC---YCHLGQMRFAFSIFAK 131
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
L +G+ P+ ++ L+ G + + + ++ + +G N ++ L + CK G+
Sbjct: 132 ILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGE 191
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
L +IE + D+V Y+T+I CK +NDA+ LY M + + P +VT +
Sbjct: 192 TRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNS 251
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L+ G C G+ +EA L MV + ++PD+ ++N L+ A CKEGK++E+KS + MM G
Sbjct: 252 LIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEG 311
Query: 376 IYPDTFT--------C------------QIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ PD T C I++ G+ K + AL+L E++ ++
Sbjct: 312 VMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDT 371
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI LC+ R A L++ + G + YN L+++LCK V A+ L +
Sbjct: 372 VTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKK 431
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
+ D+ I+ + TY LI C GR +A + ++L G ++ING C+E
Sbjct: 432 IKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGL 491
Query: 536 VNKAEALL 543
+N+AE LL
Sbjct: 492 LNEAETLL 499
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 205/423 (48%), Gaps = 20/423 (4%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+IVS + L+N L + + ++ ++ ++G PNT T L FC N V +
Sbjct: 101 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 160
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F + + GF + V+Y TLI+ CK G A + R + + V D+V Y+T+++G
Sbjct: 161 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDG 220
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ V +A++L+ M+ + +SP +V+ N+LI+ YC G+ +E+ LL EM+ I PD
Sbjct: 221 LCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPD 280
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFG--------------------VSISRDIYD 419
+T I+V KEG++ A + + + + G V+ ++ +Y
Sbjct: 281 VYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYS 340
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C+ A SL + P YN L++ LCK ++ A L DEM D
Sbjct: 341 IVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDS 400
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ TY +LI C +A++L+ ++ + G+ D +LI+G C + + A
Sbjct: 401 GQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDA 460
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + K +Y + N +G L++ L + G P+ +TC+ +I +
Sbjct: 461 QVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRA 520
Query: 600 LWK 602
L++
Sbjct: 521 LFE 523
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 179/383 (46%), Gaps = 57/383 (14%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + + R+ +V + +++GL K ++ +++Y EM I P
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVV 247
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T N L + +C G + G L ++ + +PD+ T+N L+ + CK+G++ +A +M
Sbjct: 248 TLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVM 307
Query: 302 YRRNVLPDLVTYTTLM--------------------NGLCKEGKVREAHQLFHRMVHRGL 341
+ V+PD+VTY++LM NG CK V +A LF+ M R +
Sbjct: 308 MKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRI 367
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+PD V+YN+LI CK G++ + L+ EM +G D T
Sbjct: 368 APDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIIT------------------- 408
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
Y+ LI ALC+++ A +L+++I G + YN L++ LC
Sbjct: 409 ----------------YNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLC 452
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + DA ++ +++ + ++ TY +I C G EA +L+ +M ++G +PD+
Sbjct: 453 KQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAV 512
Query: 522 ICRVLINGYCMEKDVN-KAEALL 543
C +I E D N +AE LL
Sbjct: 513 TCETIIRAL-FENDKNERAEKLL 534
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 20/317 (6%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+ ++++ + + + P++V+ N L+ G + + + + EM I P+ +TFN
Sbjct: 226 LVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFN 285
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI---- 300
IL CK G + + + + +EG PD+VTY++L+ YC +N A ++Y I
Sbjct: 286 ILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVING 345
Query: 301 ----------------MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
M R + PD VTY +L++GLCK G++ A +L M G D
Sbjct: 346 FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPAD 405
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
I++YN+LI A CK + ++ +L+ ++ GI D +T I++ G K+GRL A +
Sbjct: 406 IITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQ 465
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+L G +++ Y +I LC + A +LL ++ +G VP ++ +L + D
Sbjct: 466 DLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEND 525
Query: 465 SVADALLLKDEMVDRNI 481
A L EM+ R +
Sbjct: 526 KNERAEKLLREMIARGL 542
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 178/435 (40%), Gaps = 55/435 (12%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D + M + P+ F + K V ++E G P++V+ +
Sbjct: 52 VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL------------------------ 316
LI+ YC G++ AF ++ + + P+ +T TTL
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171
Query: 317 -----------MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+NGLCK G+ R A Q+ ++ + +S D+V Y+T+I CK+ + ++
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM+ I P T ++ GY G+ A L+ E+ ++ ++ L+ AL
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELME--------------------SLCKCDS 465
C++ + A S + + ++G +P + Y+ LM+ CK
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKM 351
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V AL L EM R I P TY +LI C GR A L+DEM +SG D
Sbjct: 352 VDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNS 411
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI+ C V+KA AL+ + D +YN + + + G L + + L G
Sbjct: 412 LIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKG 471
Query: 586 FAPNNLTCKYMIHSL 600
+ T MI+ L
Sbjct: 472 YNLTVWTYTIMINGL 486
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+ ++ ++ F + P V+ N L++GL K I W++ +EM G
Sbjct: 345 GFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPA 404
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L CKN VDK ++KI+++G D+ TYN LI CK+GRL DA ++
Sbjct: 405 DIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIF 464
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + + + TYT ++NGLC EG + EA L +M G PD V+ T+I A +
Sbjct: 465 QDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFEN 524
Query: 359 GKMQESKSLLYEMMGNGI 376
K + ++ LL EM+ G+
Sbjct: 525 DKNERAEKLLREMIARGL 542
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 159/350 (45%), Gaps = 20/350 (5%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P ++ + ++SS K L+ + + P++V+ + L+N C G++R A +
Sbjct: 69 PSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSI 128
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F +++ G P+ ++ TL+ +C K++E+ ++ G + + + ++ G K
Sbjct: 129 FAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCK 188
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G +AL ++ +++ VS +Y +I LC+D A L + P++
Sbjct: 189 IGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVT 248
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
N L+ C +A L EMV +NI P + T+ L+ C G+ EA S + M+
Sbjct: 249 LNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMM 308
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL-----GF-----FAKKFQIY--------- 553
+ G++PD L++GYC+ +VNKA+ + GF K ++
Sbjct: 309 KEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIA 368
Query: 554 -DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
DT +YN++ + + G +S EL G + +T +I +L K
Sbjct: 369 PDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCK 418
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 175/351 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + ++ + ++ G +P+ ++ L+ G K + + ++++M GI P
Sbjct: 475 GHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVP 534
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+TFN + + CK G V + L ++ F P +TYN +I Y K+G ++ A +Y
Sbjct: 535 TDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVY 594
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M R + P+++TYT+L+NG CK K+ A ++ M +GL DI Y TLI +CK
Sbjct: 595 REMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKM 654
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + +++ G+ P+T I++ Y + +ALNL E+ + IY
Sbjct: 655 QDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIY 714
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI L ++ + A L + G VP + +YN L+ LC + +A + EM
Sbjct: 715 TSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDG 774
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
NI P++ Y LI G EA L DEML+ G++PD +L+NG
Sbjct: 775 NNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 222/489 (45%), Gaps = 43/489 (8%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPS 204
A+++ E+VE+ +V +F LI E C+ K+G + ++ + + + +G QP+
Sbjct: 346 ALRLFDEVVEV--GVTPNVAIFSVLI---EWCS----KIGNVEKANELYTRMKCMGLQPT 396
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYE---------------------EMGRI--------- 234
+ NFLL G K N ++ + + + E+G++
Sbjct: 397 VFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDK 456
Query: 235 ----GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
GI P+ ++N + CK G +D + + I E G P+ +TY L+ KKG
Sbjct: 457 MIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
AF ++ M ++P T+ +++NGLCK G+V EA + + + P ++YN
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNC 576
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I Y KEG + ++S+ EM + I P+ T ++ G+ K ++ AL + +++R G
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ + +Y LI C+ A ++ + G P+ +YN ++ + +++ AL
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L EM++ I L Y +LI G+ A+ L EML G++PD + VLING
Sbjct: 697 NLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGL 756
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C + A +L YN + ++G+L + L L G P++
Sbjct: 757 CNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDD 816
Query: 591 LTCKYMIHS 599
T +++
Sbjct: 817 TTYDILVNG 825
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/566 (23%), Positives = 249/566 (43%), Gaps = 51/566 (9%)
Query: 85 PLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF 144
P +P ++ LL ++D SAL FF V+ T+ CL++ ILA N +
Sbjct: 56 PCIP--SQKQVLDTLLLHKADPRSALRFFKQVETKGGFAKTADVLCLLLQILASNPETHG 113
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW-------------AYVKVGLIRESFK 191
K L P + + + L+ C E + +YV+ I E+ +
Sbjct: 114 DAKHLLNKYVFGDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVE 173
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG--RI--------------- 234
FR L+ G P + N LL +++ N ++ ++++EM RI
Sbjct: 174 CFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACL 233
Query: 235 ------------------GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
G+ + +++I+ C+ D+D + +E EE G+ P
Sbjct: 234 KGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEG 293
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TY +I + + G +A L M V ++ T+L+ G C G V A +LF +
Sbjct: 294 TYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEV 353
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V G++P++ ++ LI K G ++++ L M G+ P F +++G+ K+ L
Sbjct: 354 VEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLL 413
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+A L+ G++ S Y+ +++ LC+ + A +L +++ G PSL YN +
Sbjct: 414 ENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ CK + DA + + +++ +KP+ TY L+ G A ++ D+M+ +G+
Sbjct: 473 ILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGI 532
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+P +ING C V++A L F K+ I + +YN + + + ++G +
Sbjct: 533 VPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAES 592
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + R +PN +T +I+ K
Sbjct: 593 VYREMCRSEISPNVITYTSLINGFCK 618
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 9/232 (3%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
EI P Y +++ +NK A+KM ++ K + V+ LI+ +
Sbjct: 601 EISPNVITYTSLINGFCKSNKMDLALKMHDDMKR--KGLELDITVYATLIA-------GF 651
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+ + + K F K L+VG P+ + N +++ LN ++ +++EM I +
Sbjct: 652 CKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDL 711
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+ L K G + ++ G PD+ YN LI+ C G+L +A + +
Sbjct: 712 KIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKE 771
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
M N+ P ++ Y TL+ G KEG ++EA +L M+ +GL PD +Y+ L+
Sbjct: 772 MDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV 823
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 189/351 (53%), Gaps = 3/351 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V+ N L+N L + + V ++ ++G P+T T N L C G+V +
Sbjct: 95 GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRS 154
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ +GF + V+Y TL++ CK G A L R++ R+ PD+V Y+T+++G
Sbjct: 155 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDG 214
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ V +A+ F M RG+ P++++Y+TLI+ +C G++ + SLL EM+ I P+
Sbjct: 215 LCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPN 274
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I++ KEG++ A L+ E+ G Y+ ++ LC+ AT+L
Sbjct: 275 VYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFM 334
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ + G P+ Y L++ LCK + +A L ++ + + TY +I C G
Sbjct: 335 KMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEG 394
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN-KAEALL-GFFAK 548
+A+++ +M ++G +P++ ++I EKD N KAE LL G AK
Sbjct: 395 MFDKALAMKSKMEDNGCIPNAVTFDIIIRSL-FEKDENDKAEKLLHGMIAK 444
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 177/358 (49%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ ++ F + L V P I+ +L L+K+ + +M GI PN T N
Sbjct: 45 VVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLN 104
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
IL + FC G + L KI + G+ PD +T NTL+ C KG + + + + + +
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ 164
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+ V+Y TL+NGLCK G+ R A +L + R PD+V Y+T+I CK+ + ++
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA 224
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
EM GI+P+ T ++ G+ G+L+ A +L+ E+ ++ + Y+ LI A
Sbjct: 225 YDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC++ + A LL + G + YN +++ LCK ++ A L +M I+P+
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY ALI C GR A L +L G D + V+I+G C E +KA A+
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAM 402
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 168/338 (49%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G + SF K L +G+QP ++ N L+ GL + + ++++ G N
Sbjct: 110 FCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMN 169
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G+ L IE+ PD+V Y+T+I CK +N A+ +
Sbjct: 170 QVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFS 229
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R + P+++TY+TL+ G C G++ A L + M+ + ++P++ +YN LI A CKEG
Sbjct: 230 EMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEG 289
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+K LL EM G D T ++ G K L A L ++++++G+ ++ Y
Sbjct: 290 KVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYT 349
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC+ R A L + + G + YN ++ LCK AL +K +M D
Sbjct: 350 ALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDN 409
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ T+ +I + +A L+ M+ G+L
Sbjct: 410 GCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 159/339 (46%)
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++E +G +P+LVT N LI+ +C G++ +F + + + PD +T TLM GLC +
Sbjct: 89 RQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLK 148
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V+ + ++V +G + VSY TL+ CK G+ + + LL + PD
Sbjct: 149 GEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMY 208
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I+ G K+ + A + E+ G+ + Y LI C + A SLL +
Sbjct: 209 STIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMIL 268
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P++ YN L+++LCK V +A L EM + + TY +++ C +
Sbjct: 269 KNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDK 328
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A +L +M + G+ P+ LI+G C + A+ L K D +YN + +
Sbjct: 329 ATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMIS 388
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++G K + ++ + G PN +T +I SL++
Sbjct: 389 GLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFE 427
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 1/309 (0%)
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R++ R+ P ++ + ++ L K A L +M +G+ P++V+ N LI +C
Sbjct: 55 RLLLVRHT-PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHL 113
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M S S+L +++ G PDT T +++G +G + +L+ ++ G +++ Y
Sbjct: 114 GQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSY 173
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+ A LL I P + +Y+ +++ LCK V A EM
Sbjct: 174 GTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNA 233
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I P++ TY LI FC G+ A SL++EM+ + P+ +LI+ C E V +
Sbjct: 234 RGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKE 293
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ LL K Q D +YN+V + + +L K L + + G PN T +I
Sbjct: 294 AKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALID 353
Query: 599 SLWKGMERK 607
L KG K
Sbjct: 354 GLCKGGRLK 362
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 101/199 (50%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W + G + +F + + P++ + N L++ L K + + ++ EM G
Sbjct: 248 WGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQP 307
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ T+N + CK+ ++DK K+++ G P+ TY LI CK GRL +A L
Sbjct: 308 ADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKL 367
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ + + D+ TY +++GLCKEG +A + +M G P+ V+++ +I + +
Sbjct: 368 FQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFE 427
Query: 358 EGKMQESKSLLYEMMGNGI 376
+ + +++ LL+ M+ G+
Sbjct: 428 KDENDKAEKLLHGMIAKGL 446
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 197/400 (49%), Gaps = 17/400 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G +++ R+ + GF P + + ++ L + +++ +Q+++EM R GI P+ +
Sbjct: 200 IGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYV 259
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ L FCK G +++ + +++E +G P++VTY LI +Y K +++ A +Y +M
Sbjct: 260 YTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMML 319
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLF---------------HRMVHRGLS--PDI 345
+ P++VTYT L++GLCK GK+ +A Q++ H V G S P++
Sbjct: 320 SKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNV 379
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+Y L+ CK +++E++ LL M G P+ ++ G K G+L A +
Sbjct: 380 FTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTT 439
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + Y LI L +D R A +L ++ ++ P++ IY E+++ LCK
Sbjct: 440 MLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 499
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+A L M ++ P++ TY A+I F GR + + L+ +M G P+ RV
Sbjct: 500 TDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRV 559
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
LIN C +++A LL + + Y V F
Sbjct: 560 LINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF 599
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 214/467 (45%), Gaps = 31/467 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ + C S +F L+ AY + G ++K +K + G QP V N L+ G
Sbjct: 104 ITEGCYPSPRIFNSLVH-------AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGG 156
Query: 215 LLK-----LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
+ + +D + Y EM G+ N + + C G +K + ++ +
Sbjct: 157 ICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK 216
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
GF PD TY+ +I C ++ AF L++ M R + PD+ YTTL++ CK G + +A
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
F M G +P++V+Y LI AY K K+ ++ + M+ G P+ T ++ G
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDI------------------YDYLIVALCQDNRP 431
K G++ A + +++ V I D+ Y L+ LC+ +
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIP-DVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQV 395
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A LL+ + +G P+ +Y+ L++ CK + +A + M++ P++ TY +L
Sbjct: 396 KEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSL 455
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I R A+ ++ +MLE+ P+ I +I+G C ++A L+ +K
Sbjct: 456 IDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGC 515
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ +Y A+ + F + G + K +EL ++ G APN +T + +I+
Sbjct: 516 NPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLIN 562
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 221/478 (46%), Gaps = 26/478 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + +VH + +++A K+L ++V+ C V+ LI C+
Sbjct: 110 PSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQC--GCQPGYVVYNILIGGI--CSSEEPGK 165
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
++ + K + + L+ G + V+ + L + ++ + V EM G P+T T+
Sbjct: 166 DVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTY 225
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + C V+K ++++ G PD+ Y TLI S+CK G + A + M R
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTYT L++ K KV +A++++ M+ +G +P+IV+Y LI CK GK+++
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEK 345
Query: 364 SKSLLYEMM------------------GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+ S +Y++M G P+ FT +V G K ++ A +L+
Sbjct: 346 A-SQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKS 404
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + +YD LI C+ + A + + + GY P++ Y+ L++ L K
Sbjct: 405 MSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKR 464
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ AL + +M++ + P++ Y +I C +G++ EA LM M E G P+
Sbjct: 465 LDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTA 524
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG---DLSKLMELQKR 580
+I+G+ V K LL + K + +Y + N G + KL+E K+
Sbjct: 525 MIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 183/422 (43%), Gaps = 22/422 (5%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++++ LL G L + +C ++ M G P+ FN L H +C++GD
Sbjct: 75 PNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKL 134
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCK-----KGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
L+K+ + G P V YN LI C K L+ A Y M V+ + V +
Sbjct: 135 LKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFS 194
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
LC GK +A+ + M+ +G PD +Y+ +I C K++++ L EM NGI
Sbjct: 195 RCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIA 254
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD + ++ + K G + A N E++R G + + Y LI A + + A +
Sbjct: 255 PDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEV 314
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI---------------- 481
E + G P++ Y L++ LCK + A + M N+
Sbjct: 315 YEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGAS 374
Query: 482 -KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+P++ TY AL+ C + EA L+ M G P+ + LI+G C +++A+
Sbjct: 375 NEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQ 434
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + + +Y+++ + +D L +++ + L APN + MI L
Sbjct: 435 EVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGL 494
Query: 601 WK 602
K
Sbjct: 495 CK 496
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 232/507 (45%), Gaps = 47/507 (9%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS- 108
F+P+T +K++ +C++ K + + + P + + + + C++ +
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY-TTLIDSFCKAGFIEQ 275
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +F+ ++ D P Y ++H + K S A ++ E++ L K C ++ +
Sbjct: 276 ARNWFDEMERD-GCAPNVVTYTALIHAYLKSRKVSKANEVY-EMM-LSKGCTPNIVTYTA 332
Query: 169 LISCTEDCNWAYVKVGLIRES---FKTFRKT------LDVGF--------QPSIVSCNFL 211
LI K G I ++ +K +K +D+ F +P++ + L
Sbjct: 333 LID-------GLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGAL 385
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++GL K + + + + M G PN ++ L CK G +D+ + E G+
Sbjct: 386 VDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGY 445
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
DP++ TY++LI K RL+ A + M + P++V YT +++GLCK GK EA++
Sbjct: 446 DPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 505
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L M +G +P++V+Y +I + K G++++ LL +M G P+ T ++++
Sbjct: 506 LMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCC 565
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE-RIGQDGYVPSL 450
G L A L+ E+++ R + Y V + NR F A+ L I ++ VP
Sbjct: 566 STGLLDEAHKLLEEMKQ--TYWPRHVAGYRKV-IEGFNREFIASLYLSFEISENDSVPVA 622
Query: 451 EIYNELMESLCKCDSVADALLLKDEM--------VDRNIKPSLSTYRALICCFCGIGRSG 502
+Y L+++ K + AL L +E+ ++NI +L +L ++
Sbjct: 623 PVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSL------AHKAD 676
Query: 503 EAVSLMDEMLESGMLPDSQICRVLING 529
+A L +M+ G +P+ I LI G
Sbjct: 677 KAFELYADMISRGSIPELSILVHLIKG 703
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 189/443 (42%), Gaps = 25/443 (5%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G RE+ K F P V +++GL + + ++ M PN
Sbjct: 22 KSGKWREALSLLEKE---EFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVL 78
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL + + L + EG P +N+L+ +YC+ G A+ L + M
Sbjct: 79 TYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKM 138
Query: 302 YRRNVLPDLVTYTTLMNGLC---KEGK--VREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ P V Y L+ G+C + GK + A + + M+ G+ + V+ + C
Sbjct: 139 VQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLC 198
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
GK +++ +++ EMM G PDT T ++ ++ A L E++R G++
Sbjct: 199 GIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVY 258
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+Y LI + C+ A + + + +DG P++ Y L+ + K V+ A + + M
Sbjct: 259 VYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMM 318
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM-LPDSQICRVLINGYCMEKD 535
+ + P++ TY ALI C G+ +A + M + + +PD + +++G E +
Sbjct: 319 LSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPN 378
Query: 536 VNKAEALLGFFAKKFQIYDTES----------------YNAVFNMFAEDGDLSKLMELQK 579
V AL+ K +Q+ + Y+A+ + + G L + E+
Sbjct: 379 VFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFT 438
Query: 580 RFLRLGFAPNNLTCKYMIHSLWK 602
L G+ PN T +I L+K
Sbjct: 439 TMLECGYDPNVYTYSSLIDRLFK 461
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 148/355 (41%), Gaps = 10/355 (2%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M +G + T H CK+G + LEK E F PD V Y +IS C+
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASL 57
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A M + LP+++TY L+ G + K+ ++ M+ G P +N+
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY------GKEGRLLSALNLVV 404
L+ AYC+ G + LL +M+ G P I++ G GK+ L A
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKD-VLDLAEKAYG 176
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
E+ GV +++ LC + A +++ + G++P Y++++ LC
Sbjct: 177 EMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNAS 236
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V A L EM I P + Y LI FC G +A + DEM G P+
Sbjct: 237 KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYT 296
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
LI+ Y + V+KA + K + +Y A+ + + G + K ++ K
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 242/537 (45%), Gaps = 73/537 (13%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS-FAMKMLCELVELVKDCPHSVDV 165
V L VK LE+ ++N C I + + +N S F + + E + + + + V
Sbjct: 192 VRGLCRAGLVKQALEL-VNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGV 250
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKT---LDVGF-QPSIVSCNFLLNGLLKLNCI 221
D+++ + A + G + E+ + FR ++G +P++V+ N +L G K +
Sbjct: 251 LPDVVTFNSRIS-ALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ E M ++G + +NI +NG++ + L+++ +G +P+ TYN +
Sbjct: 310 GDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIM 369
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ C+ L+DA L +M R V PD V Y+TL++G C GKV EA + H M+ G
Sbjct: 370 MDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGC 429
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P+ + NTL+ + KEG+ E++ +L +M PDT TC I+V G + G L A
Sbjct: 430 QPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASE 489
Query: 402 LVVELQRFG----------VSISRDI------------YDYLIVALC------------- 426
+V E+ G S+ I Y LI LC
Sbjct: 490 IVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFI 549
Query: 427 ----QDNRPFAAT------------------SLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ RP + T +L+ + ++G +L+ YN L+ L +
Sbjct: 550 EMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNN 609
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ + LKDEM ++ I P + TY +I C C G++ +A+SL+ EML+ G+ P+ +
Sbjct: 610 QIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFK 669
Query: 525 VLINGYCMEKDVNKA----EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+LI + D A E L +K + Y+ +FN G LS+ EL
Sbjct: 670 ILIKAFSKSSDFKVACELFEVALNICGRKEAL-----YSLMFNELLAGGQLSEAKEL 721
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 188/398 (47%), Gaps = 18/398 (4%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
FK+ R PS+ N LL L+ + +Y +M + P T+TFN+L H
Sbjct: 101 FKSLRAQFP-SLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHS 159
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY------RIMYR 303
C++ D EK+ ++G P+ T L+ C+ G + A L RI R
Sbjct: 160 LCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANR 219
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V Y TL++ C+E EA +L RM G+ PD+V++N+ I A C+ GK+ E
Sbjct: 220 -------VVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVME 272
Query: 364 SKSLLYEMMGNG----IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + +M + P+ T ++++G+ K G + A LV +++ G S + Y+
Sbjct: 273 ASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYN 332
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ L ++ A +L+ + G P+ YN +M+ LC+ ++DA L D M+
Sbjct: 333 IWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRN 392
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P Y L+ +C G+ EA S++ EM+ +G P++ C L++ E +A
Sbjct: 393 GVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEA 452
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
E +L +K DT + N V N +G+L K E+
Sbjct: 453 EEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEI 490
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 168/358 (46%), Gaps = 31/358 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC---- 237
K G E+ + +K + +QP V+CN ++NGL + +D+ ++ EM G
Sbjct: 445 KEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDK 504
Query: 238 ------------------PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
P+ T+ L + CK G +++ ++ + PD VTY+
Sbjct: 505 GNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYD 564
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
T I S+CK+G+++ AF + + M R L TY L+ GL ++ E + L M +
Sbjct: 565 TFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEK 624
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+SPDI +YN +I C+ GK +++ SLL+EM+ GI P+ + +I+++ + K S
Sbjct: 625 GISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS----SD 680
Query: 400 LNLVVELQRFGVSI---SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE-IYNE 455
+ EL ++I +Y + L + A L E + D Y+ +Y +
Sbjct: 681 FKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFE-VSLDRYLTLKNFMYKD 739
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L+ LC+ + +ADA L +++D+ +++ +I G +A L M+E
Sbjct: 740 LIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMME 797
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 170/400 (42%), Gaps = 40/400 (10%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEE--GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ V + G VD + + + P L YN L+ S + R +LY M
Sbjct: 84 MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP-------------------- 343
V P T+ L++ LC+ A QLF +M +G P
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203
Query: 344 --------------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ V YNTL+ +C+E E++ L+ M G+ PD T +
Sbjct: 204 ALELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISA 263
Query: 390 YGKEGRLLSALNLVVELQ---RFGVSISRDI-YDYLIVALCQDNRPFAATSLLERIGQDG 445
+ G+++ A + ++Q G+ + ++ ++ C+ A L+E + + G
Sbjct: 264 LCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVG 323
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
SLE YN + L + + +A L+ DEMV + I+P+ TY ++ C +A
Sbjct: 324 NFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDAR 383
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
LMD M+ +G+ PD+ L++GYC V +A+++L + +T + N + +
Sbjct: 384 GLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSL 443
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++G + E+ ++ + P+ +TC +++ L + E
Sbjct: 444 WKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGE 483
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W++ K G I +F+ + G ++ + N L+ GL N I + + + +EM GI
Sbjct: 568 WSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGIS 627
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+N + C+ G L ++ ++G P++ ++ LI ++ K A L
Sbjct: 628 PDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACEL 687
Query: 298 YRIMY----RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ + R+ L Y+ + N L G++ EA +LF + R L+ Y LI
Sbjct: 688 FEVALNICGRKEAL-----YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIA 742
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
C++ ++ ++ SLLY+++ G D + ++ G K G
Sbjct: 743 RLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRG 783
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 180/365 (49%), Gaps = 1/365 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+++ F D G+ P V +++GL ++ + +++ EM G+ PN +T+N +
Sbjct: 316 EAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTML 375
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H K+GD ++ ++ +G+ VT N +IS C +G+ ++AF +++ M +
Sbjct: 376 HGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQ 435
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D +TY +L+ G CKEGKV E L + +V + P + Y LI CK+G + +K L
Sbjct: 436 ADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRL 495
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M G++P+ +T ++ G K G L E G + + +I LC
Sbjct: 496 LGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCS 555
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A+ + +++ + G YN L+ CK V ++ L +E+V + ++PS S+
Sbjct: 556 RGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASS 615
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFF 546
Y +LI C G + A L +M+ G+ P + + LI+G C + + + L+G
Sbjct: 616 YASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGML 675
Query: 547 AKKFQ 551
K +
Sbjct: 676 ENKIK 680
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 188/434 (43%), Gaps = 6/434 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ G + ++ + L G P + N L+ G + +V M P
Sbjct: 237 AFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLP 296
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T+ + + CKN + + +++ G+ PD V Y T+I C+ G +A L+
Sbjct: 297 TIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLW 356
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P+ TY T+++G K G A +L++ M ++G V+ N +I C
Sbjct: 357 FEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSR 416
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK E+ + +M GI D T +++G+ KEG++ +NL+ EL S +Y
Sbjct: 417 GKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLY 476
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI+ C+D AA LL + G P+ Y+ ++ K L +E +
Sbjct: 477 ELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCN 536
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + +T +I C G+S EA + +M E+G+ D+ LI G+C E V K
Sbjct: 537 KGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGK 596
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ LL + SY ++ ++GD L + G P+ +++I
Sbjct: 597 SMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLIS 656
Query: 599 SLWK------GMER 606
L K GM+R
Sbjct: 657 GLCKQGRATEGMDR 670
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 180/441 (40%), Gaps = 37/441 (8%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI------C--------------- 237
GF P S + L + I++ +VY ++ GI C
Sbjct: 150 AGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTEL 209
Query: 238 ----------------PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
NT T L FC +G V + L + + G DP TYN L
Sbjct: 210 LFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKL 269
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C+ + M RN LP + TY ++NGLCK + EA+++F+ + RG
Sbjct: 270 IAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGY 329
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+PD V Y T+I C+ G E++ L +EMM G+ P+ +T ++ G K G A
Sbjct: 330 APDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACE 389
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E+ G + + +I LC + A + +++ + G YN L+ C
Sbjct: 390 LYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFC 449
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V + + L +E+V ++ +PS+S Y LI C G A L+ +M G+ P++
Sbjct: 450 KEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAY 509
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+++G D L K T + N + + G + E+ K+
Sbjct: 510 TYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKM 569
Query: 582 LRLGFAPNNLTCKYMIHSLWK 602
G + +T +I K
Sbjct: 570 SETGIKADAITYNSLIRGFCK 590
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 155/337 (45%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G E+ K + + +D G QP+ + N +L+G LK ++ ++Y EM G T
Sbjct: 345 EMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTV 404
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T N + C G D+ +K+ E G D +TYN+LI +CK+G++++ L +
Sbjct: 405 TCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNEL 464
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ P + Y L+ CK+G A +L M +GL P+ +Y+T++ K G
Sbjct: 465 VAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDF 524
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L E G T TC I+ G+ A + ++ G+ Y+ L
Sbjct: 525 EHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSL 584
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C++ + + +LL + G PS Y L+ LC+ A L +MV + I
Sbjct: 585 IRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGI 644
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+P + LI C GR+ E + + MLE+ + P
Sbjct: 645 EPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKP 681
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 172/389 (44%), Gaps = 10/389 (2%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+ A FN +K D P Y ++H L F A K+ E+++ K + +
Sbjct: 315 LEAYRVFNDLK-DRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMD--KGMQPNAYTY 371
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
++ + +K G + + + + + G+ + V+CN +++ L D+ ++
Sbjct: 372 NTMLHGS-------LKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFE 424
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
V+++M GI + T+N L FCK G VD+ L ++ + P + Y LI C
Sbjct: 425 VFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSC 484
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K G A L M + + P+ TY T+++G K G +L++ ++G
Sbjct: 485 KDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTA 544
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+ N +I C GK E+ + +M GI D T +++G+ KEG++ ++NL+ EL
Sbjct: 545 TCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNEL 604
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ S Y LI+ LCQ+ +A L + G P + L+ LCK
Sbjct: 605 VAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRA 664
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ + M++ IKP + + L C
Sbjct: 665 TEGMDRLMGMLENKIKPKKAAFEDLAECL 693
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/543 (25%), Positives = 250/543 (46%), Gaps = 31/543 (5%)
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
++L L+P L H + LL +++ S L FF+WV K S + +++ L +
Sbjct: 67 SELSHLIPKLKPHHVVN-LLDTHNNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDR 125
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKT-------- 192
F A + + ++K C + +V + +I + N Y G SF T
Sbjct: 126 LFVPADNVR---ILMIKSCRNEGEV-KRVIQVLSEINTTY-DFGYTLYSFSTLLIQLGKF 180
Query: 193 ---------FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRI---GICPN 239
+ + L+ G +P++ F N ++K+ C Q E MG I G CP+
Sbjct: 181 DMDGLGRDVYIEMLNSGIRPNL----FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPD 236
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T+ L CKNG++D +++ ++G DP+ VTY+ LI+ C +GRL +A +
Sbjct: 237 TFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLE 296
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + P + YT + LC G+ EA +L +M RG P++ +Y LI ++G
Sbjct: 297 EMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDG 356
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K + + + ++M+ +G+ P T ++ EGR +AL + + + + Y+
Sbjct: 357 KFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYN 416
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C AT++ +++ + G P++ YN ++ K + +A+ L + M
Sbjct: 417 VIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGN 476
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+K TY LI F G+ A SL +EM+E G+ P+ +INGY V+ A
Sbjct: 477 GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDA 536
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
AL + + + +YN + + F++ +S+ + ++ G PN +T I
Sbjct: 537 LALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDG 596
Query: 600 LWK 602
L K
Sbjct: 597 LCK 599
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 227/526 (43%), Gaps = 49/526 (9%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P + + +++ +CS + ++ L + K + P + A+ I V L S A+
Sbjct: 270 PNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKL 329
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAM----KMLCELVELVKDCPHSVDVFQD 168
+K P Y ++ L+ + KF A+ KML + + P +V +
Sbjct: 330 LGKMKKR-GCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL-----VPTAV-TYSA 382
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI N YV+ G + F L P+ + N ++ G + I + ++
Sbjct: 383 LI------NQLYVE-GRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
++M + G PN T+NI+ H++ K G ++ LE ++ G D TY LIS + +
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G+L AF L+ M + P++VTY ++NG KV +A LF +MV G P +Y
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I + K ++ E+++ +M+ G+ P+ T + G K GR A + E+++
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615
Query: 409 F-------------------------------GVSISRDIYDYLIVALCQDNRPFAATSL 437
G + D Y L+ LC R + A L
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQL 675
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+E + + G PS EIY L+ CK V AL + D MV +P LS Y+ALIC C
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCK 735
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+A + ML+ D + VL++G E + + + LL
Sbjct: 736 ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELL 781
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 217/490 (44%), Gaps = 40/490 (8%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D I+PT Y + + L + A+K+L ++ + + C +V + LIS
Sbjct: 300 DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKK--RGCGPNVQTYTALIS------- 350
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ G + + K L G P+ V+ + L+N L + ++E M P
Sbjct: 351 GLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLP 410
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
NT T+N++ FC G + K +++ + G P+++TYN +I Y K+G +N+A L
Sbjct: 411 NTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLL 470
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M + D TY L++G + GK+ A LF+ MV G+SP++V+YN +I Y
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTV 530
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ ++ +L ++M+ +G P + T +++ G+ K R+ A N ++ + G+ + Y
Sbjct: 531 AKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITY 590
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE--- 475
I LC++ R A + + + Y P+L Y+ L++ LC+ DA L D+
Sbjct: 591 TSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCE 650
Query: 476 ----------------------------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
M + ++PS YRAL+ C A+ +
Sbjct: 651 PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKI 710
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D M+ +G P + LI C KA+ + KK D + + + +
Sbjct: 711 FDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLK 770
Query: 568 DGDLSKLMEL 577
+G+ +EL
Sbjct: 771 EGETDLSLEL 780
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 185/405 (45%), Gaps = 45/405 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + +F+ F + + G P+ V+ + L+NGL +++ + EEM GI P
Sbjct: 246 GHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEP 305
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
H + I C G + L K+++ G P++ TY LIS + G+ A +Y
Sbjct: 306 TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVY 365
Query: 299 RIMYRRNVLPDLVTYTTLMN-----------------------------------GLCKE 323
M ++P VTY+ L+N G C
Sbjct: 366 HKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI 425
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G +++A +F +M+ G SP++++YN +I Y K+G M + LL M GNG+ DT+T
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD-----YLIVALCQDNRPFAATSLL 438
++ G+ + G+L A +L E+ G+S + Y+ YL VA D A +L
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDD-----ALALF 540
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ + G VPS YN ++ K + +++A +MV + + P++ TY + I C
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
GR+ A + EM + P+ LI+G C E AE LL
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL 645
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 202/459 (44%), Gaps = 39/459 (8%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + +D G +P++ + + L + ++ +M + G PN T+
Sbjct: 286 GRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTY 345
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L ++G + G K+ +G P VTY+ LI+ +GR A ++ M
Sbjct: 346 TALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLS 405
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ LP+ TY ++ G C G +++A +F +M+ G SP++++YN +I Y K+G M
Sbjct: 406 HDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNN 465
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI---------- 413
+ LL M GNG+ DT+T ++ G+ + G+L A +L E+ G+S
Sbjct: 466 AMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIIN 525
Query: 414 -------------------------SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
S Y+ +I + NR A + ++ + G +P
Sbjct: 526 GYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLP 585
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ Y ++ LCK + A + EM R+ P+L TY +LI C G++ +A L+
Sbjct: 586 NVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL 645
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D+ G P+ L+ G C + +A+ L+ KK E Y A+ ++
Sbjct: 646 DD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKN 701
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
++ +++ + GF P K +I +L K R+
Sbjct: 702 LEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQ 740
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 2/355 (0%)
Query: 251 CKN-GDVDKVNGFLEKIEEE-GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C+N G+V +V L +I F L +++TL+ K +Y M + P
Sbjct: 141 CRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRP 200
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+L T+ ++ LC +GKV+EA + + H G PD +Y +LI +CK G + + +
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
M+ +G P++ T ++ G EGRL A++++ E+ G+ + Y IV+LC
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A LL ++ + G P+++ Y L+ L + A+ + +M+ + P+ TY
Sbjct: 321 GRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTY 380
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
ALI GR A+++ + ML LP+++ V+I G+C + KA A+ K
Sbjct: 381 SALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLK 440
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ +YN + +++ + G ++ M L + G + T +I +G
Sbjct: 441 AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 119/285 (41%), Gaps = 20/285 (7%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+S Y +++ + N+ S A ++V+ + ++I+ T + K
Sbjct: 550 PSSGTYNMMISGFSKTNRISEAENFCGKMVK--------QGLLPNVITYTSFID-GLCKN 600
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +FK F + + P++ + + L++GL C + + E + G PN T+
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGL----CQEGQAEDAERLLDDGCEPNVDTY 656
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C G + + +E ++++G P Y L+ CK + A ++ M
Sbjct: 657 TTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVT 716
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P L Y L+ LCK ++A +F M+ + + D V + L+ KEG+
Sbjct: 717 TGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDL 776
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
S LL+ M ++ C + Q R LSAL +E+ +
Sbjct: 777 SLELLHVM-------ESRNCTLNFQTRVMLARELSALGCSIEIPQ 814
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 189/354 (53%), Gaps = 10/354 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P++V+CN L+N +L I + V ++ ++G PNT T N L C NG +
Sbjct: 92 GIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDK 151
Query: 260 NGFLEKIEE----------EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
+ + K+++ E +PD+ T+ L+ +CK+GR+ +A + +M + + P
Sbjct: 152 HCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPG 211
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+VTY +LM+G +V +A +F+ M G+SPDI SY+ LI +CK M E+ LL
Sbjct: 212 VVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLK 271
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM I P+ T ++ G K G++ AL LV E+ G + Y ++ ALC+++
Sbjct: 272 EMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNH 331
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ A +LL ++ G P++ Y L++ LC+ + DA + ++++ + ++ TY
Sbjct: 332 QVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYT 391
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+I FC G EA++L+ +M ++G +P+++ ++I + + AE LL
Sbjct: 392 VMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 198/394 (50%), Gaps = 11/394 (2%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ F + L P + N +L L+K + ++M GI PN NI
Sbjct: 43 VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS----------YCKKGRLNDAF 295
L + FC+ G + L KI + G+ P+ +T NTLI +C G+L DA
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L+ M N+ PD+ T+T L++G CKEG+V+EA + M+ +G+ P +V+YN+L+ Y
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
++ ++KS+ M G+ PD + I++ G+ K + A+ L+ E+ + +
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI LC+ + A L++ + G P++ Y+ ++++LCK V +A+ L +
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M ++ I+P++ TY LI C G+ +A + +++L G + V+I G+C +
Sbjct: 343 MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGL 402
Query: 536 VNKAEALLGFFAKKFQIYDTESYN-AVFNMFAED 568
++A LL I + ++Y + ++F +D
Sbjct: 403 FDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKD 436
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 188/399 (47%), Gaps = 10/399 (2%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D ++ + + P FN + K+ V +K+E G P+LV
Sbjct: 41 NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 100
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH-------- 330
N LI+S+C+ G + AF + + + P+ +T TL+ GLC GK+ + H
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160
Query: 331 --QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
LF++M+ ++PD+ ++ L+ +CKEG+++E+K++L MM GI P T ++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY ++ A ++ + + GVS Y LI C+ A LL+ + +P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ Y+ L++ LCK ++ AL L DEM DR P++ TY +++ C + A++L+
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+M G+ P+ +LI G C + A + K + +Y + F +
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
G + + L + G PN T + +I SL+K E +
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENE 439
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 176/357 (49%), Gaps = 11/357 (3%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL------KLNCI 221
+L++C N ++ ++G I +F K L +G++P+ ++ N L+ GL +CI
Sbjct: 96 NLVNCNILIN-SFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154
Query: 222 ----DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
++ +M I P+ +TF IL FCK G V + L + +G P +VT
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN+L+ Y ++N A ++ M + V PD+ +Y+ L+NG CK + EA +L M
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
H+ + P++V+Y++LI CK GK+ + L+ EM G P+ T I+ K ++
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+A+ L+ +++ G+ + Y LI LCQ + A + E + G+ ++ Y ++
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ C +AL L +M D P+ TY +I + A L+ EM+E+
Sbjct: 395 QGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIET 451
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 165/298 (55%), Gaps = 1/298 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G ++E+ + G +P +V+ N L++G + +++ ++ M ++G+ P
Sbjct: 186 GFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSP 245
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +++IL + FCK +D+ L+++ + P++VTY++LI CK G+++ A L
Sbjct: 246 DIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLV 305
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R P++VTY+++++ LCK +V A L +M ++G+ P++ +Y LI C+
Sbjct: 306 DEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQS 365
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+++++ + +++ G + +T +++QG+ +G AL L+ +++ G + Y
Sbjct: 366 GKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTY 425
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL-CKCDSVADALLLKDE 475
+ +I++L + + A LL + + + + + N+L+ S+ S ++LL K +
Sbjct: 426 EIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTGSSPGNSLLCKKQ 483
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 10/437 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+ ++ + +++ IKP+ + ++++ A + FA +L ++++ FQ
Sbjct: 87 AVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMG---------FQ 137
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+ G + E+ + +D GF+ V ++NGL K+ Q+
Sbjct: 138 IDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQM 197
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ +M +I + PN +N + CK G VD+ G ++ E G + D+ +YN++I +C
Sbjct: 198 FPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCS 257
Query: 288 KGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
GR A L ++ R V PD+ T+ L++GLCK G+V EA+ + M+ RG PDIV
Sbjct: 258 VGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIV 317
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
SYN L+ YC G + E+K + +M+ P+ + ++ GY K + A+ L+ E+
Sbjct: 318 SYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM 377
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ Y+ L+ L + R L+E + G L YN L++ K +
Sbjct: 378 HNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKF 437
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
AL L +++ I P++ TY L+ C GR A + + G P+ + ++
Sbjct: 438 DKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIM 497
Query: 527 INGYCMEKDVNKAEALL 543
I+G C E +++AEALL
Sbjct: 498 IHGLCKEGFLDEAEALL 514
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 176/339 (51%), Gaps = 1/339 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R++ + F K + P+++ N +++GL K +D+ + EM GI + +
Sbjct: 187 KIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVY 246
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++N + H FC G L+++ G PD+ T+N LI CK GR+++A+ + +
Sbjct: 247 SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +R PD+V+Y LMNG C G V EA Q+F +MV R P+++SY TLI YCK
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ LL EM + PDT T ++ G K GR L +LV ++ G Y+
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ + + A +L + I + G P++ YN L++ LCK + A + + +
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+P++ TY +I C G EA +L+ +M+ + LP+
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPN 525
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 192/402 (47%), Gaps = 1/402 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS+++ + L+N +L + + + + ++G + L C G V +
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L + + GF D V Y T+I+ CK G+ DA ++ M + V P+L+ Y T+++GLC
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDT 380
K+G V EA L MV G+ D+ SYN++I +C G+ Q + LL EM+ G +YPD
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
+T I++ G K GR+ A N+V + + G Y+ L+ C A + ++
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + +P++ Y L+ CK V +A++L EM ++N+ P TY L+ GR
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
S L++ M SG D VL++ Y + +KA AL + + +YN
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + G L E+ + G PN T MIH L K
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCK 503
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 198/403 (49%), Gaps = 4/403 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N LL+ L+KL + +Y + + I P+ TF+IL + F + G + L I
Sbjct: 73 NKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNIL 132
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+ GF D+ TL+ C KGR+ +A L R D V Y T++NGLCK GK R
Sbjct: 133 KMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTR 192
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+A Q+F +M + P+++ YNT+I CK+G + E+ L EM+ NGI D ++ ++
Sbjct: 193 DAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDG 445
G+ GR +A+ L+ E+ G + D+Y + LI LC+ R A +++ + + G
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRG-KVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ P + YN LM C SV +A + D+MV+R P++ +Y LI +C + EA+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ EM ++PD+ L++G L+ Q D +YN + + +
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ K + L + + +G +PN T ++ L K K+
Sbjct: 432 FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKY 474
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 156/312 (50%), Gaps = 1/312 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNT 240
K GL+ E+ + ++ G + + S N +++G + ++ +EM G + P+
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+TFNIL CK G V + + + + G+ PD+V+YN L++ YC G + +A ++
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R LP++++Y TL+NG CK V EA L M ++ L PD V+YN L+ K G+
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
L+ M +G D T +++ Y K + AL L + G+S + Y+
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ R A + + + G P++ YN ++ LCK + +A L +MV+ N
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521
Query: 481 IKPSLSTYRALI 492
P+ T+ ++
Sbjct: 522 YLPNYITFDTIV 533
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + N L++GL KL + + + V M + G P+ ++N L + +C +G V +
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+K+ E P++++Y TLI+ YCK +++A L M+ +N++PD VTY L++GL K
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSK 398
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ L M G D+++YN L+ Y K K ++ +L ++ GI P+ T
Sbjct: 399 SGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRT 458
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ G K GRL A + L G + Y+ +I LC++ A +LL ++
Sbjct: 459 YNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMV 518
Query: 443 QDGYVPSLEIYNELMESL 460
+ Y+P+ ++ ++ ++
Sbjct: 519 NNNYLPNYITFDTIVRAI 536
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Query: 202 QPS-IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
QP+ +++ N LL+ K D+ +++ + IGI PN T+NIL CK+G +
Sbjct: 417 QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAK 476
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ + +G P++ TYN +I CK+G L++A L M N LP+ +T+ T++ +
Sbjct: 477 EIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAI 536
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 54/97 (55%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ F+ +++G P+I + N LL+GL K + ++++ + G PN T+NI+
Sbjct: 439 KALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMI 498
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
H CK G +D+ L K+ + P+ +T++T++ +
Sbjct: 499 HGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 214/481 (44%), Gaps = 17/481 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +I+ F A+++L +L H+ D+ +C N A
Sbjct: 155 PIPPMYHVILEAACRGGGFRSAVRVLEDL--------HARGCALDVGNCNLVLN-AICDQ 205
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW----QVYEEMGRIGICPN 239
G + E+ R G +P +VS N +L GL C+ + W ++ EEM R+ PN
Sbjct: 206 GSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL----CMAKRWGCVQELMEEMVRMACPPN 261
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TFN L C+NG ++V+ L ++ E G PD+ Y T+I CK+G L A +
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 321
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + P++V Y TL+ GLC + E +L M + D V++N L+ +C+ G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ LL +M+ G PD T ++ G+ KEG + A+ L+ + G + Y
Sbjct: 382 LVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC R A L+ ++ Q G + +N L+ LCK V A+ L +M+
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P L +Y +I G++ EA+ L++ M+ GM P++ I + + E +NK
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ D YNAV + + G+ + +E + G PN T +I
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621
Query: 600 L 600
L
Sbjct: 622 L 622
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 206/428 (48%), Gaps = 40/428 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS----------- 171
+P +Y ++ L ++ +++ E+V + CP ++ F LIS
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA--CPPNIVTFNTLISYLCRNGLFERV 281
Query: 172 -----------CTEDCN-WAYVKVGLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLNG 214
CT D +A + G+ +E + + + G +P++V N LL G
Sbjct: 282 HEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 215 LLKLNCIDQCWQVYEEMGRIGI---CP-NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L C + W+ EE+ CP + TFNIL FC+NG VD+V LE++ E G
Sbjct: 342 L----CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERG 397
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD++TY T+I+ +CK+G +++A L + M P+ ++YT ++ GLC + +A
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +M+ +G + +++NTLI CK+G ++++ LL +M+ NG PD + ++ G
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 517
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
GK G+ AL L+ + G+S + IY + AL ++ R + + I QD + S
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI-QDTTIRSD 576
Query: 451 EI-YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN ++ SLCK A+ MV P+ STY LI G EA ++
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636
Query: 510 EMLESGML 517
E+ G L
Sbjct: 637 ELCSKGAL 644
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 158/369 (42%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +T+ + C G + L+++ G P Y+ ++ + C+ G
Sbjct: 116 VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A + ++ R D+ ++N +C +G V EA L + G PD+VSYN ++
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 235
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 295
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN L++ LC + + L
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM D++ T+ L+ FC G + L+++MLE G +PD +ING+C E
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKE 415
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL +T SY V +L + ++ G N +T
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 476 NTLINFLCK 484
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 147/325 (45%), Gaps = 3/325 (0%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN +++ YC+ G+L A R+ V P+ TY ++ LC G++ +A + M
Sbjct: 93 YNAMVAGYCRAGQLESA---RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
RG +P Y+ ++ A C+ G + + +L ++ G D C +++ +G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL+L+ +L FG Y+ ++ LC R L+E + + P++ +N L+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ + +MV+ P + Y +I C G A +++ M G+
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ L+ G C + + E LL K D ++N + + F ++G + +++EL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
++ L G P+ +T +I+ K
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCK 414
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 226/502 (45%), Gaps = 11/502 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
Q + SAL FN + D + P Y +++ + A ++ ++ + P
Sbjct: 377 AQGNLDSALNLFNKITED-GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK--LNGIPP 433
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
SV L+ Y+K L E+ K F + +D G +I + N +++ L K +
Sbjct: 434 SVFNVNSLLR-------GYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 485
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D+ + + M G+ PN ++N + C+ G++D + + P++VTY+ L
Sbjct: 486 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 545
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I KKG A L+ M N+ P T+ T++NGLCK G++ EA + G
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 605
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P ++YN+++ + KEG + + ++ EM G+ P+ T ++ G+ K R+ AL
Sbjct: 606 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 665
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
E++ G+ + Y LI C+ +A L + + G P+ +YN ++
Sbjct: 666 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+++ AL+ +M++ I L TY LI GR A L EML G++PD
Sbjct: 726 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 785
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
VL+NG C + + A +L +K YN + + +G+L + L
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
L G P+++T +I+ +KG
Sbjct: 846 LDRGLVPDDVTYDILINGKFKG 867
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 155/625 (24%), Positives = 268/625 (42%), Gaps = 61/625 (9%)
Query: 34 QIIQDSEHKSLS------NPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLL 87
+I++ S +SL+ NP NF PE +P SS S T+ + +
Sbjct: 37 EILEKSTSESLTHFPEDPNPKANF-PEKISPESSFPGNSSSPYPRYSQDTVPTSQIHQET 95
Query: 88 PHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK-FSFAM 146
L + + LL +D SAL +F + YC+++HIL + + A
Sbjct: 96 TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 155
Query: 147 KMLCELVELVKDCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTFR 194
K+L V D P V LI+C + ++ AY++ I + F
Sbjct: 156 KLLNRYVSGDSD-PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFN 214
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ P + N LL L++ N I + +Y +M GI + T +++ K G
Sbjct: 215 AMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEG 274
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP------ 308
V++ + + +E G D Y+ +I + CKK N L M R +P
Sbjct: 275 RVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFT 334
Query: 309 -----------------------------DLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+LV T+LM G C +G + A LF+++
Sbjct: 335 SVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITED 394
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GL P+ V+Y+ LI C G ++++ L +M NGI P F +++GY K A
Sbjct: 395 GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 454
Query: 400 LNLVVELQRFGVSISRDIYDYLIVA--LCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
L E GV+ +I+ Y I+ LC+ + A SLL+ + G VP++ YN+++
Sbjct: 455 SKLFDEAVDCGVA---NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMI 511
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
C+ ++ A + +M+ R++KP++ TY LI G S +A+ L D+ML +
Sbjct: 512 LGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIA 571
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P +ING C +++A L F ++ I +YN++ + F ++G++ + +
Sbjct: 572 PTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAV 631
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G +PN +T +I+ K
Sbjct: 632 YREMCEFGVSPNVVTYTSLINGFCK 656
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 184/399 (46%), Gaps = 25/399 (6%)
Query: 48 LYNFLPETQNPNKIV--DLICSSLKKGDSHLT------LLQNDLKPLLPHLGAHEISRVL 99
L N + + PN + D+I +KG+ + +L DLKP ++ + I
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP---NVVTYSILIDG 548
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVK 157
+ DS AL F+ + + L I PT + I++ L + S A L +E +
Sbjct: 549 NFKKGDSEKALDLFDQMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 607
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
C + ++ ++K G I + +R+ + G P++V+ L+NG K
Sbjct: 608 SCM----TYNSIVD-------GFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 656
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
N ID + +EM G+ + ++ L FCK D++ ++ E G P+ +
Sbjct: 657 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 716
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN++IS + + A Y+ M + DL TYTTL++GL KEG++ A L+ M+
Sbjct: 717 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 776
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+G+ PDI++++ L+ C +G+++ ++ +L EM + P ++ GY +EG L
Sbjct: 777 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 836
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
A L E+ G+ YD LI + +R + S
Sbjct: 837 EAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSRPS 875
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 143/283 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + E+ + L+ GF PS ++ N +++G +K ID VY EM G+ PN
Sbjct: 586 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 645
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + FCK+ +D +++ E+G + D+ Y+ LI +CK+ + A L+ +
Sbjct: 646 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 705
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ + Y ++++G + A + +M++ + D+ +Y TLI KEG++
Sbjct: 706 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 765
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM+ GI PD T ++V G +G+L +A ++ E+ R ++ S IY+ L
Sbjct: 766 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 825
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
I ++ A +L + + G VP Y+ L+ K D
Sbjct: 826 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGD 868
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 209/442 (47%), Gaps = 35/442 (7%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R D P+ S N ++ G+ + +V++EM + PN T+N + K
Sbjct: 4 RMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKG 63
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
GD++ +++ G P+ +TYN L+S C+ GR+ + L M + ++PD TY
Sbjct: 64 GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123
Query: 314 TTL-----------------------------------MNGLCKEGKVREAHQLFHRMVH 338
+ L +NGLCK+GKV A ++ +V+
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVN 183
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
GL P V YNTLI YC+ G+++ + S +M I PD T ++ G K R+ +
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITN 243
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A +L++E+Q GV+ + + ++ LI A + + +L + ++G P++ Y ++
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ CK + +A+ + D+M +++ P+ Y A+I + G + +A L+++M +G+ P
Sbjct: 304 AFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 363
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+LI G C + +++AE ++ + I D SYN + + G++ K ++LQ
Sbjct: 364 SIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQ 423
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
+R + G T +I L
Sbjct: 424 QRMHKYGIKSTVRTYHQLISGL 445
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 205/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K G + F+ + + G +P+ ++ N LL+GL + + + + +EM + P
Sbjct: 59 GHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVP 118
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++IL +NGD + K + G T + L++ CK G+++ A +
Sbjct: 119 DGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVL 178
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + ++P V Y TL+NG C+ G++ A F +M R + PD ++YN LI CK
Sbjct: 179 QSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKA 238
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ LL EM NG+ P T ++ YG+ G+L ++ E+Q G+ + Y
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ A C++ + A ++L+ + +P+ ++YN ++++ + A +L ++M
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I PS+ TY LI C + EA +++ + ++PD+ LI+ C +++K
Sbjct: 359 NGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDK 418
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L K +Y+ + + G L+++ L ++ ++ P+N M+
Sbjct: 419 ALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVE 478
Query: 599 SLWK 602
+ K
Sbjct: 479 AYSK 482
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 174/362 (48%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F K L G +C+ LLNGL K + +V + + G+ P +N L + +C+
Sbjct: 143 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 202
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G+++ +++ PD +TYN LI+ CK R+ +A L M V P + T
Sbjct: 203 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 262
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ TL++ + G++ + + M GL P++VSY +++ A+CK GK+ E+ ++L +M
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+ P+ I+ Y + G A LV +++ G+S S Y+ LI LC ++
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A ++ + +P YN L+ + C ++ AL L+ M IK ++ TY LI
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 442
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
G GR E L +M+++ ++P + I +++ Y + KAE L +K
Sbjct: 443 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNN 502
Query: 553 YD 554
+D
Sbjct: 503 HD 504
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 208/432 (48%), Gaps = 12/432 (2%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS 108
+ P N ++ +C + + G++ L + + ++P + I L DS +
Sbjct: 79 HGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 138
Query: 109 ALTFFN-WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
L+ F ++KN + I + + ++++ L + K S A ++L LV P V ++
Sbjct: 139 MLSLFGKYLKNGVTIGDYTCS--ILLNGLCKDGKVSIAEEVLQSLVN-AGLVPTRV-IYN 194
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI+ Y + G + +F TF + +P ++ N L+NGL K I +
Sbjct: 195 TLIN-------GYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM G+ P TFN L + + G ++K L +++E G P++V+Y ++++++CK
Sbjct: 248 LMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +A + M+ ++VLP+ Y +++ + G +A L +M G+SP IV+
Sbjct: 308 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 367
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN LI C + ++ E++ ++ + + + PD + ++ G + AL+L +
Sbjct: 368 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 427
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
++G+ + Y LI L R L +++ Q+ VPS I+N ++E+ K +
Sbjct: 428 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 487
Query: 468 DALLLKDEMVDR 479
A L+ EM+ +
Sbjct: 488 KAEDLRKEMLQK 499
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 242/596 (40%), Gaps = 122/596 (20%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P YC+++ LA + + ++ +L E+V S V DLI T +W K
Sbjct: 312 PNHVTYCMLIDTLAKAQRGNESLSLLGEVV--------SRGVVMDLIMYTALMDW-LCKE 362
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+ FR L P+ V+ L++ L K +D QV EM I PN TF
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT----------------------- 280
+ + + K G V K ++ +++E G DP++VTY T
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLC 482
Query: 281 ------------LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
L++ K G++ A L+R M R VL D V YTTL++GL K G +
Sbjct: 483 EGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPA 542
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A ++ + + L PD V YN I C GK +E++S L EM G+ PD T ++
Sbjct: 543 AFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIA 602
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+EG+ AL L+ ++R + + Y LIV L + A LL + G+ P
Sbjct: 603 AQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662
Query: 449 S-----------------------------------LEIYNELMESLCKCDSVADALLLK 473
+ + +YN L+ LC A+++
Sbjct: 663 TSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVL 722
Query: 474 DEMVDRNIKPSLSTYRALIC------------------CFCGI----------------- 498
+EM R I P T+ ALI + GI
Sbjct: 723 EEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESA 782
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTE 556
GR GE+ +++EM + G+ P + +L+ GY K NK EA+ + K +
Sbjct: 783 GRIGESDMVLNEMKKRGIEPSNLTYDILVTGYG--KQSNKVEAVRLYCEMVGKGFLPKVS 840
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS---LWKGME-RKF 608
+YNA+ + F++ G +S+ EL G P + T ++ L G E RKF
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKF 896
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 192/397 (48%), Gaps = 2/397 (0%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V N L++G K+ ++ + V E M G+ + +N L C+ G+VD ++
Sbjct: 174 VVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVD 233
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ +G +P++VTY I YC++ ++DAF LY M R+ VLPD+VT + L+ GLCK+G
Sbjct: 234 TMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG 293
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ EA+ LF M G +P+ V+Y LI K + ES SLL E++ G+ D
Sbjct: 294 RFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYT 353
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ KEG++ A ++ + + Y LI ALC+ A +L + +
Sbjct: 354 ALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK 413
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI-CCFCGIGRSGE 503
P++ ++ ++ L K V A EM +R I P++ TY +I F +G+
Sbjct: 414 SISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA- 472
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ + EML G+ + I L+NG + KAEAL ++ + D +Y + +
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G+L ++ + P+ + I+ L
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 166/326 (50%), Gaps = 2/326 (0%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT--FNILTHVFCKNGDVDKVNGFL 263
V+ N +L GL + +D+ + E M R G +N L +CK GD++
Sbjct: 138 VTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVA 197
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
E+++ +G D+V YN+L++ C+ G ++ A + M R V P++VTYT + C+
Sbjct: 198 ERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRR 257
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
V +A L+ MV +G+ PD+V+ + L+ CK+G+ E+ +L EM G P+ T
Sbjct: 258 NAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTY 317
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++ K R +L+L+ E+ GV + +Y L+ LC++ + A +
Sbjct: 318 CMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALS 377
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
D + P+ Y L+++LCK +V A + EM +++I P++ T+ ++I G G+
Sbjct: 378 DNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGK 437
Query: 504 AVSLMDEMLESGMLPDSQICRVLING 529
A M EM E G+ P+ +I+G
Sbjct: 438 ATDYMREMKERGIDPNVVTYGTVIDG 463
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 189/459 (41%), Gaps = 70/459 (15%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + ++F + + + G P +V+ + L+ GL K + + ++ EM +IG PN
Sbjct: 254 YCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPN 313
Query: 240 THTFNILTHVF-----------------------------------CKNGDVDKVNGFLE 264
T+ +L CK G +D+
Sbjct: 314 HVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+ P+ VTY LI + CK G ++ A + M +++ P++VT+++++NGL K G
Sbjct: 374 HALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRG 433
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
V +A M RG+ P++V+Y T+I K + + + +EM+ G+ + F
Sbjct: 434 WVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVD 493
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+V G K G++ A L E+ GV LL+ +
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGV-------------------------LLDHVN-- 526
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
Y L++ L K ++ A + E+ ++N+ P Y I C C +G+S EA
Sbjct: 527 --------YTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEA 578
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
S ++EM +G+ PD +I E KA LL + + +Y+ +
Sbjct: 579 ESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVG 638
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
E G + K L GF+P +LT + ++ + +G
Sbjct: 639 LFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQG 677
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 196/456 (42%), Gaps = 70/456 (15%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I ++ FR+ + G V+ L++GL K + ++V +E+ + P+
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N+ + C G + FLE+++ G PD VTYNT+I++ ++G+ A L M
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP------------------ 343
R ++ P+L+TY+TL+ GL + G V +A L + M G SP
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS 680
Query: 344 -----------------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
DI YNTL+ C G +++ +L EM G GI PDT T +
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ K G L +A + YD ++ G
Sbjct: 741 ILGHFKSGHLDNAFS---------------TYDQML--------------------YHGI 765
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ +N L+ L + ++ ++ +EM R I+PS TY L+ + EAV
Sbjct: 766 SPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVR 825
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L EM+ G LP LI+ + +++A+ L + + + +Y+ + + ++
Sbjct: 826 LYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWS 885
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + +++ + K GF+P+ T + + K
Sbjct: 886 KLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSK 921
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 173/366 (47%), Gaps = 3/366 (0%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T ++N++ F + G + L ++ + G D VT NT++ C+ GR++ A L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 299 RIMYRRNVLP--DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+M R + D+V + +L++G CK G + A + RM +G+ D+V YN+L+ C
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ G++ ++ ++ M +G+ P+ T + + Y + + A +L E+ R GV
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
L+ LC+D R A +L + + G P+ Y L+++L K ++L L E+
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V R + L Y AL+ C G+ EA + L P+ VLI+ C +V
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ AE +L +K + +++++ N + G + K + + G PN +T +
Sbjct: 401 DGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTV 460
Query: 597 IHSLWK 602
I +K
Sbjct: 461 IDGSFK 466
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 13/393 (3%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
NY ++ L A K+ EL E K+ V+ I+C +G +
Sbjct: 526 NYTTLIDGLFKTGNLPAAFKVGQELTE--KNLLPDAVVYNVFINC-------LCMLGKSK 576
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + G +P V+ N ++ + + ++ M R I PN T++ L
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY-LYRIMYRRNV 306
+ G V+K L ++ GF P +T+ ++ + C +GR +D ++ M +
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGL 695
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
D+ Y TL+ LC G R+A + M RG++PD +++N LI + K G + + S
Sbjct: 696 CADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFS 755
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+M+ +GI P+ T ++ G GR+ + ++ E+++ G+ S YD L+
Sbjct: 756 TYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYG 815
Query: 427 QDNRPFAATSLL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ + A L E +G+ G++P + YN L+ K ++ A L +EM +R + P+
Sbjct: 816 KQSNKVEAVRLYCEMVGK-GFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTS 874
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
TY L+ + + E + +M E G P
Sbjct: 875 CTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSP 907
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
++ G I N L+ L + V EEM GI P+T TFN L K+G +
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D +++ G P++ T+NTL+ GR+ ++ + M +R + P +TY L
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ G K+ EA +L+ MV +G P + +YN LI + K G M ++K L EM G+
Sbjct: 811 VTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGV 870
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P + T I+V G+ K + +++ G S S+ + A + + A
Sbjct: 871 LPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARR 930
Query: 437 LLERI 441
LL+ +
Sbjct: 931 LLKNL 935
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G+ R++ + G P ++ N L+ G K +D + Y++M GI PN TF
Sbjct: 713 GMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATF 772
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L G + + + L ++++ G +P +TY+ L++ Y K+ +A LY M
Sbjct: 773 NTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVG 832
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ LP + TY L++ K G + +A +LF+ M +RG+ P +Y+ L+ + K E
Sbjct: 833 KGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTE 892
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+ L +M G P T I + + K G A L+ L +
Sbjct: 893 VRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 204/420 (48%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+ I E+F + + G P +V+ + L++GL + + + ++ EM +IG+ PN
Sbjct: 269 YCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPN 328
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ K V++ G L ++ G DLV Y T++ K+G++ +A + R
Sbjct: 329 HVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLR 388
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
N+ P+ VTYT L++ C+ G + A Q+ +M + +SP++V++++++ K G
Sbjct: 389 HALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRG 448
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ + +M +GI P+ T ++ G+ K +AL++ ++ GV + I D
Sbjct: 449 CIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVD 508
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L ++ A +L + +G+ G + Y LM+ L K ++ AL + E+++R
Sbjct: 509 SLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMER 568
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P Y I C C +G+ EA S + EM +G+ PD +I+ C E + +KA
Sbjct: 569 NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKA 628
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL + +Y + E G + K L GF P LT + ++ +
Sbjct: 629 LKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 222/520 (42%), Gaps = 44/520 (8%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+ + + P YC + LA + + ++ +L E+V S V DL+ T +
Sbjct: 321 DKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMV--------SRGVAMDLVMYTTVMD 372
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
K G I E+ R L P+ V+ L++ + ID Q+ +M +
Sbjct: 373 R-LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY--C--------- 286
PN TF+ + + K G + K G++ K+++ G P++VTY TLI + C
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491
Query: 287 ------------------------KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K G + +A L++ M R +L D V Y TLM+GL K
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + A ++ ++ R LSPD V YN I C+ GK E+KS L EM G+ PD T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ +EG AL L+ E++ + + Y L+V L + A LL +
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G+ P+ Y ++++ S L + + M+ + ++ Y L+ C G +
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A ++DEML G+ PD+ LI G+C ++ A A + + ++N +
Sbjct: 732 KATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLL 791
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + + + ++G PNNLT ++ K
Sbjct: 792 GGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAK 831
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 196/397 (49%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+V N L++G K+ + V E M G+ + +N L F +GD D
Sbjct: 188 GVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVA 247
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
E+++ +G +P +VT+ TLI YCK R+ +AF LY M R VLPD+VT + L++GLC++
Sbjct: 248 ERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRD 307
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ EA+ LF M G++P+ V+Y T I + K ++ ES LL EM+ G+ D
Sbjct: 308 GRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMY 367
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ GKEG++ A +++ ++ + Y L+ A C+ A +L ++ +
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE 427
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P++ ++ ++ L K +A A +M D I P++ TY LI F
Sbjct: 428 KSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEA 487
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ + +ML G+ ++ I L+NG ++ +AEAL ++ + D +Y + +
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ +++ + + +P+ + I+ L
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 214/501 (42%), Gaps = 48/501 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++V A +ML ++ E K +V F +++ V
Sbjct: 395 ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE--KSVSPNVVTFSSILN-------GLV 445
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I ++ RK D G P++V+ L++G K + VY +M G+ N
Sbjct: 446 KRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + KNG++++ + + E G D V Y TL+ K G + A + + +
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
RN+ PD V Y +N LC+ GK EA M + GL PD +YNT+I A C+EG
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ LL EM + I P+ T +V G + G + A L+ E+ G + + Y +
Sbjct: 626 SKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRV 685
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ A P+ + E + G + +YN L+ LC A ++ DEM+ R I
Sbjct: 686 LQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGI 745
Query: 482 KPSLSTYRALICCFC-----------------------------------GIGRSGEAVS 506
P T+ ALI C GR GEA +
Sbjct: 746 APDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 805
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYNAVFNM 564
++ EM + G+ P++ +L+ GY K NK EAL + K I +YN++ +
Sbjct: 806 VICEMKKMGLEPNNLTYDILVTGYA--KKSNKVEALRLYCEMVSKGFIPKASTYNSLISD 863
Query: 565 FAEDGDLSKLMELQKRFLRLG 585
FA+ G +++ EL R G
Sbjct: 864 FAKAGMMNQAKELFSEMKRRG 884
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 210/450 (46%), Gaps = 10/450 (2%)
Query: 162 SVDVFQDLISCTEDCNWAYV--------KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
++DV++D++ + N V K G I E+ F+ + G V+ L++
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
GL K + +V +E+ + P+ +N+ + C+ G + FL+++ G +P
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D TYNT+IS+ C++G + A L M ++ P+L+TYTTL+ GL + G V +A L
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE-MMGNGIYPDTFTCQIIVQGYGK 392
+ M G +P ++Y ++ A C + ++E MMG G++ D +V
Sbjct: 668 NEMASAGFTPTPLTYRRVLQA-CSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G A ++ E+ G++ ++ LI+ C+ + A + ++ G P++
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L+ L + +A + EM ++P+ TY L+ + EA+ L EM+
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMV 846
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G +P + LI+ + +N+A+ L ++ ++ + +Y+ + N +++ + +
Sbjct: 847 SKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGT 906
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ L K LGF P+ T M + K
Sbjct: 907 EVRILLKDMKELGFKPSKGTISSMSRAFSK 936
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 178/430 (41%), Gaps = 43/430 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSI----VSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+Y + +R + R + G QP + VS N L GL + V EM +
Sbjct: 89 SYCSLHALRPALSLLRSS--SGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKR 146
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEK-IEEEGFDP-DLVTYNTLISSYCKKGRLN 292
G+ + T + + G V + E + G D +V +N LI YCK +
Sbjct: 147 GVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMA 206
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A + M + + D+V Y TL+ G G A ++ RM G+ P +V++ TLI
Sbjct: 207 AALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLI 266
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
YCK +++E+ +L M+ +G+ PD T +V G
Sbjct: 267 GEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDG----------------------- 303
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
LC+D R A +L + + G P+ Y ++SL K V ++L L
Sbjct: 304 ------------LCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGL 351
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
EMV R + L Y ++ G+ EA ++ L + P+ VL++ +C
Sbjct: 352 LGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCR 411
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+++ AE +L +K + +++++ N + G ++K ++ G APN +T
Sbjct: 412 AGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVT 471
Query: 593 CKYMIHSLWK 602
+I +K
Sbjct: 472 YGTLIDGFFK 481
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 171/421 (40%), Gaps = 44/421 (10%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
NY ++ L A+K+ EL+E ++ V+ I+C ++G
Sbjct: 541 NYATLMDGLFKTGNMPAALKVGQELME--RNLSPDAVVYNVFINC-------LCRLGKFS 591
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ ++ + G +P + N +++ + + ++ EM I PN T+ L
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDP---------------------------------- 273
+ G V+K L ++ GF P
Sbjct: 652 VGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLH 711
Query: 274 -DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
D+ YNTL+ C G A + M R + PD +T+ L+ G CK + A
Sbjct: 712 ADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFAT 771
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ +M+H+GLSP+I ++NTL+ G++ E+ +++ EM G+ P+ T I+V GY K
Sbjct: 772 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAK 831
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ + AL L E+ G Y+ LI + A L + + G + +
Sbjct: 832 KSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSST 891
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ K + + +L +M + KPS T ++ F G + EA L+ +
Sbjct: 892 YDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLF 951
Query: 513 E 513
+
Sbjct: 952 K 952
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 13/327 (3%)
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+L ++ + GRL+ A + ++ P L+ L G V A + R
Sbjct: 24 SLALAFLRAGRLSAASH---VVSSLPAPPPARLLRRLIPALASSGLVAAASRF------R 74
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG--NGIYPDTFTCQIIVQGYGKEGRLL 397
+ D ++ N++I +YC ++ + SLL G + DT + I + G ++G
Sbjct: 75 PVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGR 134
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI--YNE 455
A ++ E+ + GV +V L + A +L E + + + L + +N
Sbjct: 135 LAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNA 194
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L++ CK +A AL + + M + + + Y L+ F G + A + + M G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ P LI YC K + +A L + + D + +A+ + DG S+
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
L + ++G APN++T I SL K
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAK 341
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 229/517 (44%), Gaps = 27/517 (5%)
Query: 86 LLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFA 145
L+P L +S + ++AL FF W+ T +Y ++ IL N A
Sbjct: 63 LIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAA 122
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
+ +++ SC +V L F S+
Sbjct: 123 ENVRNSMIK----------------SCVSSHEARFVLNLLTHHEFSL-----------SV 155
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
S N L L + ID+ ++++M G+ PN +FN + + CK G+V +
Sbjct: 156 TSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCG 215
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ + GF D TY +LI YCK L DA+ ++ IM + L + V+YT L++G C+ GK
Sbjct: 216 LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGK 275
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA +LF +M G PD+ +Y L+ A+C+ GK E+ EM+ NGI P+ +T +
Sbjct: 276 IDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTV 335
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ + K G++ + ++ + G+ S ++ LI C+ A +L+ + +
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+ YNEL+ C+ S+ A+ L ++M + + P+L TY LI C A
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L M++ G +PD + I+ C V +A + +K + Y A+ + +
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGY 515
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ S L KR L G PN++T ++ L K
Sbjct: 516 CKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 191/422 (45%), Gaps = 45/422 (10%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F +K D P Y ++V K + A+K E+VE +V +
Sbjct: 279 ALELFFQMKED-GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVE--NGIEPNVYTYTV 335
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI + KVG + E + L+ G S+V N L++G K ++ V
Sbjct: 336 LID-------YFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVL 388
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+ M +CPN+ T+N L FC+ +D+ L K+ E P+LVTYNTLI CK
Sbjct: 389 DSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKA 448
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
++ A+ L+ +M + +PD T+ ++ LCK GKV +AHQ+F + + + Y
Sbjct: 449 RVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLY 508
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
LI YCK K ++ L M+ G +P++ T +++ G KEG++ A++LV + +
Sbjct: 509 TALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGK 568
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
F P++ Y L+E + +
Sbjct: 569 FDAK-----------------------------------PTVHTYTILIEEILRESDFDR 593
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A + D+M+ +P++ TY A I +C GR EA ++ ++ E G+L DS I VL+N
Sbjct: 594 ANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVN 653
Query: 529 GY 530
Y
Sbjct: 654 AY 655
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 204/452 (45%), Gaps = 69/452 (15%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
++L K CP+S + +LI + + + + K + P++V+ N L+
Sbjct: 391 MKLNKVCPNS-RTYNELIC-------GFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+GL K +D W+++ M + G P+ TF CK G V++ + E ++E+ +
Sbjct: 443 HGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE 502
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ Y LI YCK + +DA L++ M P+ +T+ L++GL KEGKV +A L
Sbjct: 503 ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSL 562
Query: 333 -----------------------------------FHRMVHRGLSPDIVSYNTLIFAYCK 357
+M+ G P++V+Y I AYC+
Sbjct: 563 VDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCR 622
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+G++ E++ ++ ++ GI D+F ++V YG G+L SA +++ + G SR
Sbjct: 623 QGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQT 682
Query: 418 YDYLIVAL-------------------CQDNRPF-------AATSLLERIGQDGYVPSLE 451
Y L+ L DN T L E++ + G VP++
Sbjct: 683 YSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVN 742
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y++L++ LCK + ++ A L + M + I PS + + +L+ C +G EA+ L+D M
Sbjct: 743 TYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+E L + ++L+ G + + KAE +
Sbjct: 803 MEYNHLAHLESYKLLVCGLFEQGNQEKAEEIF 834
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 156/387 (40%), Gaps = 36/387 (9%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
++D C + K D+HL + + P+ + LR + A++ + V
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVD-VMGKF 569
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ KPT Y +++ + + F A L +++ C +V + I AY
Sbjct: 570 DAKPTVHTYTILIEEILRESDFDRANMFLDQMIS--SGCQPNVVTYTAFIK-------AY 620
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + E+ + K + G + L+N + +D + V M G P+
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSR 680
Query: 241 HTFNIL--------------------THVFCKNGDVDKVNGF------LEKIEEEGFDPD 274
T++IL T++ N ++ K+ F EK+ E+G P+
Sbjct: 681 QTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPN 740
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+ TY+ LI CK L+ AF L+ M + P + +L++ CK G EA +L
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLD 800
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M+ + SY L+ ++G ++++ + ++ G D ++++ G ++G
Sbjct: 801 SMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKG 860
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYL 421
+ L +++ G + D + L
Sbjct: 861 YVDECSQLRDIMEKTGCRLHSDTHTML 887
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 12/445 (2%)
Query: 173 TEDCNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW---- 225
T +CN A + G + E+ RK G + IVS N +L GL C+ + W
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL----CMAKRWGDVE 236
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++ +EM R+ PN TFN L C+NG ++V+ L ++ E G PD+ Y T+I
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK+G L A + M + P++V Y T++ GLC + +EA +L M + D
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++N L+ +C+ G + LL +M+ +G PD T ++ G+ KEG + A+ L+
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + Y ++ LC R A L+ ++ Q G P+ +N L+ LCK
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V A+ L +M+ P L +Y +I G++ EA+ L++ M+ G+ P++ I
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+ E VNK + D YNAV + + + + ++ + G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 586 FAPNNLTCKYMIHSLW-KGMERKFQ 609
PN T +I L +G+ ++ Q
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQ 621
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 168/366 (45%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V E M G +T N++ + C+ G VD+ G L K+ G + D+V+YN ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C R D L M R + P++VT+ TL+ LC+ G H++ +M G +PDI
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
Y T+I CKEG ++ + +L M G+ P+ +++G R A L+ E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + + ++ L+ CQ+ LLE++ G +P + Y ++ CK
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +A++L M KP+ +Y ++ C GR +A LM +M++ G P+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LIN C + V +A LL D SY+ V + + G + +EL + G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 586 FAPNNL 591
+PN +
Sbjct: 527 ISPNTI 532
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 43/400 (10%)
Query: 154 ELVK-DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
E+V+ DC ++ F LI + GL + + + G P I ++
Sbjct: 241 EMVRVDCAPNIVTFNTLIG-------YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G+ K ++ ++ M G+ PN +N + C + L ++ ++
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE---- 328
D VT+N L+ +C+ G ++ L M +PD++TYTT++NG CKEG + E
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 329 -------------------------------AHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
A +L +M+ +G P+ V++NTLI CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+G ++++ LL +M+ NG PD + ++ G GK G+ AL L+ + G+S + I
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + AL ++ R + + I +YN ++ SLCK A+ MV
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ STY LI G + EA L+ E+ G L
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +TF + C G + L+++ +G P Y+ ++ + C+ G +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ + M+ + D ++N +C++G V EA L ++ G DIVSYN ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN +++ LC + +A L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM ++ T+ L+ FC G + L+++ML G +PD +ING+C E
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL + +T SY V G EL + ++ G PN +T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 465 NTLINFLCK 473
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 9/324 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y ++ L ++ A ++L E+ + KDCP F L+ +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ--KDCPLDDVTFNILVD-------FFC 367
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ GL+ + + L G P +++ ++NG K ID+ + + M G PNT
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ I+ C G + ++ ++G P+ VT+NTLI+ CKKG + A L + M
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PDL++Y+T+++GL K GK EA +L + MV++G+SP+ + Y+++ A +EG++
Sbjct: 488 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + + I D ++ K A++ + G + Y L
Sbjct: 548 NKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTML 607
Query: 422 IVALCQDNRPFAATSLLERIGQDG 445
I L + A LL + G
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRG 631
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/551 (26%), Positives = 247/551 (44%), Gaps = 25/551 (4%)
Query: 59 NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDS--VSALTFFNWV 116
N + +CSSL K + + + +++ LL + + E+ + C++ S +SA V
Sbjct: 92 NSLDGFVCSSLLKLLARFRVFK-EIENLLETMKSKEL---IPTCEALSFVISAYAGSGLV 147
Query: 117 KNDLEIKPT--SSNYCL--------IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
K LE+ T + C+ ++++L + K A K+ E+V+ D VD +
Sbjct: 148 KEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGD----VDNY 203
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
I C K G + E K G P+IV N L++G K I++
Sbjct: 204 TVCIVTKGLC-----KEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANL 258
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+++E+ G P T+ + + FCK G + V+ L +++E G L +N +I +
Sbjct: 259 LFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARF 318
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K G +A R M PD+ TY TL+NG C +GKVREA +L + RGL P+
Sbjct: 319 KHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKF 378
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
SY LI A+ K G+ + LL EM G D +V G G + AL + ++
Sbjct: 379 SYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKM 438
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ +IY+ L+ LC+ R AA LL + P + L++ + ++
Sbjct: 439 MERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNL 498
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+A L ++R I S+ A+I +C G +A+ M PD +
Sbjct: 499 DEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTI 558
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I+GY + D+ A + G KK + ++ ++ N F +GDL++ ++ + GF
Sbjct: 559 IDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGF 618
Query: 587 APNNLTCKYMI 597
PN +T +I
Sbjct: 619 EPNVVTYTILI 629
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 221/529 (41%), Gaps = 108/529 (20%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGI 236
AY GL++E+ + + +DV P + +CN LLN L+ ++ +VY+EM R G
Sbjct: 140 AYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGD 199
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
N +T I+T CK G V++ +EK +G P++V YNTLI YCK G + A
Sbjct: 200 VDN-YTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANL 258
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS-------------- 342
L++ + + LP + TY ++N CK+GK +L M RGL+
Sbjct: 259 LFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARF 318
Query: 343 ---------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
PD+ +YNTLI C +GK++E++ LL + G++P+ F
Sbjct: 319 KHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKF 378
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ ++ + K G + A L++E+ G ++ Y L+ L A ++ +++
Sbjct: 379 SYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKM 438
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G +P IYN LM LCK A L EM+D+N+ P L+ F G
Sbjct: 439 MERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNL 498
Query: 502 GEAVSLMDEMLESG-------------------MLPDSQIC----------------RVL 526
EA L +E G M+ D+ +C +
Sbjct: 499 DEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTI 558
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I+GY + D+ A + G KK + ++ ++ N F +GDL++ ++ + GF
Sbjct: 559 IDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGF 618
Query: 587 APN-----------------------------------NLTCKYMIHSL 600
PN + T Y+++ L
Sbjct: 619 EPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 212/501 (42%), Gaps = 23/501 (4%)
Query: 114 NWVKNDLEIK---PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI 170
N + +L++K PT Y +++ KF K+L E+ E + S+ +F +I
Sbjct: 257 NLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKE--RGLAVSLQIFNGII 314
Query: 171 SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
A K G E+ R ++ G +P + + N L+NG + + ++ E
Sbjct: 315 D-------ARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEH 367
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
R G+ PN ++ L H F KNG+ + + L ++ E G DL+ Y L+ G
Sbjct: 368 AIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGE 427
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
++ A + M R +LPD Y LM+GLCK+G+ A QL M+ + ++PD T
Sbjct: 428 VDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNAT 487
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
L+ + + G + E+K L + GI C +++GY K G + AL +
Sbjct: 488 LVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGV 547
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S Y +I + N A + + + P++ + L+ C+ + A
Sbjct: 548 HSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAE 607
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ +EM +P++ TY LI FC G+ +A ++ML + +P+ L+NG
Sbjct: 608 KVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGL 667
Query: 531 CMEKDV-----------NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ N G + +YN++ + + ++L
Sbjct: 668 TNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHD 727
Query: 580 RFLRLGFAPNNLTCKYMIHSL 600
+ + GF P+ ++ ++H L
Sbjct: 728 KMMSKGFPPDPVSFIALLHGL 748
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 114/236 (48%), Gaps = 11/236 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++ ++ F++ + P + + +++G +K N + +++ M + P
Sbjct: 526 GYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKP 585
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TF L + FC+NGD+++ E++ GF+P++VTY LI +CK+G+L A + +
Sbjct: 586 NVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFF 645
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH-----------QLFHRMVHRGLSPDIVS 347
M +P+ T+ L+NGL + + + F M+ G I +
Sbjct: 646 EQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAA 705
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
YN+++ C+ ++ + L +MM G PD + ++ G EGRL N++
Sbjct: 706 YNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVI 761
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 145/315 (46%), Gaps = 21/315 (6%)
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RGLSPDIVSYNTLIFAY 355
L M + ++P + +++ G V+EA +L++ ++ PD+ + N+L+
Sbjct: 118 LLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLL 177
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
GK++ ++ + EM+ D +T I+ +G KEG++ +L+ +R+G
Sbjct: 178 VHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIE--KRWGKGCVP 235
Query: 416 DI--YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD--SVADALL 471
+I Y+ LI C++ A L + + G++P+++ Y ++ + CK D LL
Sbjct: 236 NIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLL 295
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ EM +R + SL + +I G EA + M+ESG PD LING C
Sbjct: 296 V--EMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSC 353
Query: 532 MEKDVNKAEALL------GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+ V +AE LL G F KF SY + + F+++G+ + EL G
Sbjct: 354 SKGKVREAEELLEHAIRRGLFPNKF------SYTPLIHAFSKNGEYVRASELLIEMSERG 407
Query: 586 FAPNNLTCKYMIHSL 600
+ + ++H L
Sbjct: 408 HTLDLIAYGALVHGL 422
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 131/309 (42%), Gaps = 33/309 (10%)
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
++L+ L + +E L M + L P + + +I AY G ++E+ L ++
Sbjct: 100 SSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVID 159
Query: 374 -NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI---------- 422
+ PD F C S LNL+V + V I+R +YD ++
Sbjct: 160 VHNCVPDVFACN-------------SLLNLLVHHGK--VEIARKVYDEMVDRNGDVDNYT 204
Query: 423 -----VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
LC++ + L+E+ G VP++ YN L++ CK + A LL E+
Sbjct: 205 VCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELK 264
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK-DV 536
+ P++ TY A+I FC G+ L+ EM E G+ QI +I+ ++
Sbjct: 265 VKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEI 324
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A+A+ + D +YN + N G + + EL + +R G PN + +
Sbjct: 325 EAADAVRWMIESGCEP-DMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPL 383
Query: 597 IHSLWKGME 605
IH+ K E
Sbjct: 384 IHAFSKNGE 392
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 90/262 (34%), Gaps = 55/262 (20%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y I+ N A++M + L K C +V F LI+ + +
Sbjct: 550 PDEFTYSTIIDGYVKQNDLRGALRMFGLM--LKKTCKPNVVTFTSLIN-------GFCRN 600
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + K F + GF+P++V+ L+ K + + +E+M PN TF
Sbjct: 601 GDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATF 660
Query: 244 NILTH----------------------------------------------VFCKNGDVD 257
N L + C++ V
Sbjct: 661 NYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVK 720
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+K+ +GF PD V++ L+ C +GRL D + + L V Y+ +
Sbjct: 721 PALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNVIPCNFNERQLQIAVKYSEKL 780
Query: 318 NGLCKEGKVREAHQLFHRMVHR 339
+ EG +A L +V +
Sbjct: 781 DQFLSEGLTSDASLLLQTLVEK 802
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 215/481 (44%), Gaps = 17/481 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +I+ F A+++L +L H+ D+ +C N A
Sbjct: 155 PIPPMYHVILEAACRGGGFRSAVRVLEDL--------HARGCALDVGNCNLVLN-AICDQ 205
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW----QVYEEMGRIGICPN 239
G + ++ R G +P +VS N +L GL C+ + W ++ EEM R+ PN
Sbjct: 206 GSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL----CMAKRWGCVQELMEEMVRMACPPN 261
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TFN L C+NG ++V+ L ++ E G PD+ Y T+I CK+G L A +
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILN 321
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + P++V Y TL+ GLC + E +L M + D V++N L+ +C+ G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ LL +M+ +G PD T ++ G+ KEG + A+ L+ + G + Y
Sbjct: 382 LVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC R A L+ ++ Q G + +N L+ LCK V A+ L +M+
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P L +Y +I G++ EA+ L++ M+ GM P++ I + + E +NK
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ D YNAV + + G+ + +E + G PN T +I
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621
Query: 600 L 600
L
Sbjct: 622 L 622
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 205/428 (47%), Gaps = 40/428 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS----------- 171
+P +Y ++ L ++ +++ E+V + CP ++ F LIS
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA--CPPNIVTFNTLISYLCRNGLFERV 281
Query: 172 -----------CTEDCN-WAYVKVGLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLNG 214
CT D +A + G+ +E + + + G +P++V N LL G
Sbjct: 282 HEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKG 341
Query: 215 LLKLNCIDQCWQVYEEMGRIGI---CP-NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L C + W+ EE+ CP + TFNIL FC+NG VD+V LE++ G
Sbjct: 342 L----CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHG 397
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD++TY T+I+ +CK+G +++A L + M P+ ++YT ++ GLC + +A
Sbjct: 398 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAE 457
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +M+ +G + +++NTLI CK+G ++++ LL +M+ NG PD + ++ G
Sbjct: 458 DLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGL 517
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
GK G+ AL L+ + G+S + IY + AL ++ R + + I QD + S
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI-QDTTIRSD 576
Query: 451 EI-YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ YN ++ SLCK A+ MV P+ STY LI G EA ++
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636
Query: 510 EMLESGML 517
E+ G L
Sbjct: 637 ELCSKGAL 644
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 157/369 (42%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +T+ + C G + L+++ G P Y+ ++ + C+ G
Sbjct: 116 VPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A + ++ R D+ ++N +C +G V +A L + G PD+VSYN ++
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLK 235
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTP 295
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN L++ LC + + L
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM D++ T+ L+ FC G + L+++ML G +PD +ING+C E
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKE 415
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL +T SY V +L + ++ G N +T
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 476 NTLINFLCK 484
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 146/325 (44%), Gaps = 3/325 (0%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN +++ YC+ G+L A R+ V P+ TY ++ LC G++ +A + M
Sbjct: 93 YNAMVAGYCRAGQLESA---RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
RG +P Y+ ++ A C+ G + + +L ++ G D C +++ +G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL+L+ +L FG Y+ ++ LC R L+E + + P++ +N L+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC+ + +M + P + Y +I C G A +++ M G+
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ L+ G C + + E LL K D ++N + + F ++G + +++EL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
++ L G P+ +T +I+ K
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCK 414
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 3/363 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + F + +D+ +P ++ L K+N +D +E+M + G P+ T+ +L
Sbjct: 32 KALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLV 91
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H K ++ + E++ +G P+LVTY T+++ YCK GR++ A L R +
Sbjct: 92 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 151
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P Y+TL++GLCK + EA +LF + G D++ Y + I CK GK+ E+K++
Sbjct: 152 PSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAV 209
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G PD + +I+ K+ R+ A L+ + + L+ LC+
Sbjct: 210 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 269
Query: 428 DNRPFAATSLLERIGQDG-YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
R A +LER+ + G PS+ Y+ +++ LCK D + DA ++ +M P +
Sbjct: 270 SRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVV 329
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY A+I FC +GR EA L M E G D +LI GYC V++A A++
Sbjct: 330 TYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389
Query: 547 AKK 549
A +
Sbjct: 390 AGR 392
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 3/342 (0%)
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L +++ G P +VT+ +LI C+ N A ++ M V PD YT ++ LC
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K K+ A F +MV G PD V+Y L+ + K K ++ + EM+ G P+
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T +V GY K GR+ AL+L+ L+ G S S +Y LI LC+ +R A L E
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
D V + +Y + LCK + +A + +M++ P +Y +I C R
Sbjct: 181 AGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTESYNA 560
EA LMD+ +E +P +C VL++G C + V +A +L + +Y+A
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
V + + L + ++ R G P+ +T +I + K
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCK 340
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 167/363 (46%), Gaps = 7/363 (1%)
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
EM GI P TF L C+ +K ++ + PD Y +I CK
Sbjct: 4 EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+L+ A + M + LPD VTYT L++ L K K + HQ+F M+ +G SP++V+Y
Sbjct: 64 KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 123
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T++ YCK G++ ++ SL+ + G G P ++ G K R A EL
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR----ELFEM 179
Query: 410 GVSISRD--IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+D +Y I LC+ + A ++ ++ + G P YN ++ SLCK + V+
Sbjct: 180 AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 239
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQICRVL 526
+A L D+ ++R P + L+ C R EA +++ MLE+G P +
Sbjct: 240 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAV 299
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
I+G C ++ A +L + + D +Y A+ + F + G L + EL +R G
Sbjct: 300 IDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 359
Query: 587 APN 589
A +
Sbjct: 360 ASD 362
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 128/254 (50%), Gaps = 12/254 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ S Y ++ L +++ A EL E+ V V+ IS K
Sbjct: 152 PSGSLYSTLIDGLCKHDRHEEAR----ELFEMAAGDVQDVIVYTSFIS-------GLCKA 200
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ K ++ G P VS N ++ L K N + + ++ ++ P
Sbjct: 201 GKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVC 260
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+L CK+ V++ LE++ E G P +VTY+ +I CK RL+DA+ + + M
Sbjct: 261 TVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMR 320
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R +PD+VTYT +++ CK G++ EA +LF RM RG + D+V+YN LI YC+ K+
Sbjct: 321 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVD 380
Query: 363 ESKSLLYEMMGNGI 376
E+ +++ EM G GI
Sbjct: 381 EAIAMIEEMAGRGI 394
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 162/364 (44%), Gaps = 30/364 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE-------------- 154
AL F+ + D+++KP + Y +++ L NK A ++V+
Sbjct: 33 ALQIFHQM-IDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLV 91
Query: 155 --LVKDCP--HSVDVFQDLIS---CTEDCNWA-----YVKVGLIRESFKTFRKTLDVGFQ 202
L K C +F++++S E +A Y K G I ++ R+ G
Sbjct: 92 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 151
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS + L++GL K + ++ +++E G + + CK G +D+
Sbjct: 152 PSGSLYSTLIDGLCKHDRHEEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAV 209
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ E G PD V+YN +I S CK R+++A L R +P + T L++GLCK
Sbjct: 210 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 269
Query: 323 EGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+V EA + RM+ G +P +V+Y+ +I CK ++ ++ +L +M G PD
Sbjct: 270 SRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVV 329
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I+ + K GRL A L + G + Y+ LI C+ + A +++E +
Sbjct: 330 TYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEM 389
Query: 442 GQDG 445
G
Sbjct: 390 AGRG 393
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 12/445 (2%)
Query: 173 TEDCNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW---- 225
T +CN A + G + E+ RK G + IVS N +L GL C+ + W
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL----CMAKRWGDVE 236
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++ +EM R+ PN TFN L C+NG ++V+ L ++ E G PD+ Y T+I
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK+G L A + M + P++V Y T++ GLC + +EA +L M + D
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++N L+ +C+ G + LL +M+ +G PD T ++ G+ KEG + A+ L+
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + Y ++ LC R A L+ ++ Q G P+ +N L+ LCK
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V A+ L +M+ P L +Y +I G++ EA+ L++ M+ G+ P++ I
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+ E VNK + D YNAV + + + + ++ + G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 586 FAPNNLTCKYMIHSLW-KGMERKFQ 609
PN T +I L +G+ ++ Q
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQ 621
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 168/366 (45%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V E M G +T N++ + C+ G VD+ G L K+ G + D+V+YN ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C R D L M R + P++VT+ TL+ LC+ G H++ +M G +PDI
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
Y T+I CKEG ++ + +L M G+ P+ +++G R A L+ E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + + ++ L+ CQ+ LLE++ G +P + Y ++ CK
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +A++L M KP+ +Y ++ C GR +A LM +M++ G P+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LIN C + V +A LL D SY+ V + + G + +EL + G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 586 FAPNNL 591
+PN +
Sbjct: 527 ISPNTI 532
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 43/400 (10%)
Query: 154 ELVK-DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
E+V+ DC ++ F LI + GL + + + G P I ++
Sbjct: 241 EMVRVDCAPNIVTFNTLIG-------YLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G+ K ++ ++ M G+ PN +N + C + L ++ ++
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE---- 328
D VT+N L+ +C+ G ++ L M +PD++TYTT++NG CKEG + E
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413
Query: 329 -------------------------------AHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
A +L +M+ +G P+ V++NTLI CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+G ++++ LL +M+ NG PD + ++ G GK G+ AL L+ + G+S + I
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + AL ++ R + + I +YN ++ SLCK A+ MV
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
P+ STY LI G + EA L+ E+ G L
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +TF + C G + L+++ +G P Y+ ++ + C+ G +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ + M+ + D ++N +C++G V EA L ++ G DIVSYN ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN +++ LC + +A L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM ++ T+ L+ FC G + L+++ML G +PD +ING+C E
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL + +T SY V G EL + ++ G PN +T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 465 NTLINFLCK 473
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 9/324 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y ++ L ++ A ++L E+ + KDCP F L+ +
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ--KDCPLDDVTFNILVD-------FFC 367
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ GL+ + + L G P +++ ++NG K ID+ + + M G PNT
Sbjct: 368 QNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTV 427
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++ I+ C G + ++ ++G P+ VT+NTLI+ CKKG + A L + M
Sbjct: 428 SYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PDL++Y+T+++GL K GK EA +L + MV++G+SP+ + Y+++ A +EG++
Sbjct: 488 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRV 547
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + + I D ++ K A++ + G + Y L
Sbjct: 548 NKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTML 607
Query: 422 IVALCQDNRPFAATSLLERIGQDG 445
I L + A LL + G
Sbjct: 608 IKGLASEGLAKEAQELLSELCSRG 631
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 202/444 (45%), Gaps = 45/444 (10%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+ + N +N L + + V M +IG+ P T N + + C GDV+ +E
Sbjct: 110 VCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVE 169
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
K+E G+ + TY L++ CK G + A + M +RN+ P++V Y +++GLCK G
Sbjct: 170 KMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRG 229
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE-GKMQESKSLLYEMMG-NGIYPDTFT 382
V EA L H M + P++V+YN LI C E G +E L EM+ GI PD T
Sbjct: 230 LVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQT 289
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC---QDNRPFAATSLLE 439
I+V G+ KEG LL A ++V + R GV + Y+ LI C Q L+
Sbjct: 290 FSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMV 349
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R G+ G +PS+ +N L+ CK V A+ L EMV + + P + T+ +LI FC +
Sbjct: 350 REGE-GCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVK 408
Query: 500 R-----------------------------------SGEAVSLMDEMLESGMLPDSQICR 524
+ EAV+L M++SG+ D I
Sbjct: 409 KPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYN 468
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
++++G C +N A LL K D+ +YN + +G L EL ++
Sbjct: 469 IMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKEN 528
Query: 585 GFAPNNLTCKYMIHSLWKGMERKF 608
G PN C Y + +G+ RK+
Sbjct: 529 GCPPNK--CSYNV--FVQGLLRKY 548
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 182/372 (48%), Gaps = 4/372 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + +K + P++V N +L+GL K + + + EMG + + PN
Sbjct: 192 KIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVV 251
Query: 242 TFNILTHVFCK--NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L C G + V F E + E+G PD+ T++ L+ +CK+G L A +
Sbjct: 252 TYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVG 311
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS--PDIVSYNTLIFAYCK 357
M R V P++VTY +L+ G C ++ EA ++F MV G P +V++N+LI +CK
Sbjct: 312 FMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCK 371
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ ++ SLL EM+G G+ PD FT ++ G+ + + L+A L ++ G +
Sbjct: 372 VKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQT 431
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L + A +L + + G + IYN +++ +CK + DA L ++
Sbjct: 432 CAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVL 491
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +K TY +I C G +A L+ +M E+G P+ V + G + D+
Sbjct: 492 VKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIA 551
Query: 538 KAEALLGFFAKK 549
++ L K
Sbjct: 552 RSRKYLQIMKDK 563
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--I 236
+ K GL+ + + +G +P++V+ N L+ G + +++ +V+ M R G
Sbjct: 296 GFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGC 355
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ T N L H +CK +VDK L ++ +G DPD+ T+ +LI +C+ + A
Sbjct: 356 LPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARE 415
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L+ M +P+L T +++GL K EA LF M+ GL DIV YN ++ C
Sbjct: 416 LFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMC 475
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K GK+ +++ LL ++ G+ D++T I+++G +EG L A L+ +++ G ++
Sbjct: 476 KMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKC 535
Query: 417 IYDYLIVAL 425
Y+ + L
Sbjct: 536 SYNVFVQGL 544
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 147/313 (46%), Gaps = 5/313 (1%)
Query: 184 GLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G RE F + + + G P + + + L++G K + + V M RIG+ PN T
Sbjct: 265 GGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVT 324
Query: 243 FNILTHVFCKNGDVD---KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+N L +C ++ +V G + + E EG P +VT+N+LI +CK ++ A L
Sbjct: 325 YNSLIAGYCLRSQMEEAMRVFGLMVR-EGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLS 383
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+ T+T+L+ G C+ K A +LF M G P++ + ++ K
Sbjct: 384 EMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCW 443
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
E+ +L MM +G+ D I++ G K G+L A L+ + G+ I Y+
Sbjct: 444 LDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYN 503
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC++ A LL ++ ++G P+ YN ++ L + +A + M D+
Sbjct: 504 IMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDK 563
Query: 480 NIKPSLSTYRALI 492
+T LI
Sbjct: 564 GFPVDATTAELLI 576
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 35/224 (15%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK------- 252
G PS+V+ N L++G K+ +D+ + EM G+ P+ T+ L FC+
Sbjct: 354 GCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAA 413
Query: 253 ---------NGDVDKV-------NGFLE------------KIEEEGFDPDLVTYNTLISS 284
+G V + +G L+ + + G D D+V YN ++
Sbjct: 414 RELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDG 473
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK G+LNDA L + + + D TY ++ GLC+EG + +A +L +M G P+
Sbjct: 474 MCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPN 533
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
SYN + ++ + S+ L M G D T +++++
Sbjct: 534 KCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIR 577
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+K L E+ FR + G IV N +L+G+ K+ ++ ++ + G+
Sbjct: 438 GLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKI 497
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++T+NI+ C+ G +D L K++E G P+ +YN + +K + +
Sbjct: 498 DSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYL 557
Query: 299 RIMYRRNVLPDLVTYTTLM 317
+IM + D T L+
Sbjct: 558 QIMKDKGFPVDATTAELLI 576
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 214/435 (49%), Gaps = 21/435 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI------------- 170
P++++ CL H+LA + ++ + ++L LV L + PH DL+
Sbjct: 63 PSTAHACLAAHLLARDRLYAHSRRVLSRLVALRR--PHLAASLVDLLHRAALALGPRRSA 120
Query: 171 --SCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
S + GL+ ++ + + ++ P+ +CN +L L + +++
Sbjct: 121 LASVVDTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF 180
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E++ PN TFNI+ CK G++ + +++E G PD+VT+N+LI Y K
Sbjct: 181 EQLP----APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKC 236
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G L++ L M R D+VTY L+N CK G++ A+ F M G+ ++V++
Sbjct: 237 GELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTF 296
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+T + A+CKEG ++E+ L +M G+ + FT ++ G K GRL A+ L+ E+ R
Sbjct: 297 STFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVR 356
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GV ++ Y L+ LC++ + A +L + + G + +Y L+ +
Sbjct: 357 QGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEK 416
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL L EM ++ ++ +S Y ALI C + + EA SL+ +M ESG+ P+ I +++
Sbjct: 417 ALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMD 476
Query: 529 GYCMEKDVNKAEALL 543
V +A A+L
Sbjct: 477 ACFKSGKVPEAIAML 491
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 186/372 (50%), Gaps = 22/372 (5%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ F + ++G P +V+ N L++G K +D+ Q+ EEM R G +
Sbjct: 200 KEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVV 259
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + FCK G ++ G+ ++ EG ++VT++T + ++CK+G + +A L+ M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + + TYT L++G CK G++ +A L MV +G+ ++V+Y L+ CKE K+
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ +L M G+ + ++ G+ AL L+ E++ G+ + +Y L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC ++ A SLL ++ + G P+ IY +M++ K V +A+ + +++D
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499
Query: 482 KPSLS----------------------TYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+P+ Y AL+ + G +A +L +M++SG+ D
Sbjct: 500 QPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 559
Query: 520 SQICRVLINGYC 531
I+G+C
Sbjct: 560 LFCYTCFISGFC 571
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 128/305 (41%), Gaps = 24/305 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K GL+RE+ K F + G + + L++G K +D + +EM R G+
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ +L CK V + L +E+ G + + Y TLI + A L
Sbjct: 362 NVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLL 421
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + D+ Y L+ GLC K+ EA L +M GL P+ + Y T++ A K
Sbjct: 422 SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKS 481
Query: 359 GKMQESKSLLYEMMGNGIYP----------------------DTFTCQIIVQGYGKEGRL 396
GK+ E+ ++L +++ +G P D ++ GY K+G L
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 541
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDN-RPFAATSLLERIGQDGYVPSLEIYNE 455
A L ++ G+ + Y I C N P A E IG G P +YN
Sbjct: 542 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH-GIAPDRAVYNC 600
Query: 456 LMESL 460
L+ +
Sbjct: 601 LITQI 605
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/565 (24%), Positives = 260/565 (46%), Gaps = 23/565 (4%)
Query: 54 ETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFF 113
+ ++P K+ D+IC + D T LQN ++ L+P H + +L AL FF
Sbjct: 78 QHRSPEKLEDIICRMMANRD-WTTRLQNSIRALVPEFD-HSLVYNVLHGARKPDHALQFF 135
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SVDVFQDLISC 172
WV+ I+ + I+ IL ++S C ++E D P ++ +D+
Sbjct: 136 RWVERAGLIQHDRETHMKIIQILG---RYSMLNHARCIVLE---DMPKKGFELDEDMFVL 189
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
D +Y K G+++ES K F K ++G + S+ S N L +++ + + +M
Sbjct: 190 LID---SYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFFNKML 246
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
GI P HT+N+L F + + F E ++ G PD+VTYNT+I+ Y + R+
Sbjct: 247 DEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRME 306
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+A L+ M +++ P +++YTT++ G ++ + +L M G+ P+ V+Y TL+
Sbjct: 307 EAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLEEMKSVGIKPNNVTYTTLL 366
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYP-DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
C GKM E+K +L EM+ I P D ++ K G L +A++++ + + +
Sbjct: 367 PDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSI 426
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV----PSLEI----YNELMESLCKC 463
Y LI C+ A ++++ ++ + +LE+ YN +++ LC
Sbjct: 427 PSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSH 486
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
A +L +++ + ++ L+ + LIC G A ++ M G+ D+
Sbjct: 487 GQTGKAEILFRQLLKKGVEDPLA-FNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAY 545
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
R+LI Y + + A+ L + + D+ + +V EDG + + K +
Sbjct: 546 RLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVE 605
Query: 584 LGFAPN-NLTCKYMIHSLWKGMERK 607
G N +L K + L +G E +
Sbjct: 606 KGVKENMDLVAKILEALLMRGHEEE 630
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 165/384 (42%), Gaps = 51/384 (13%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W + +R + + + G P +V+ N ++NG + +++ +++ EM I
Sbjct: 262 WGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIA 321
Query: 238 PNTHTFNILTHVFCKNGDVDKVNG---FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
P ++ + + VD++N LE+++ G P+ VTY TL+ C G++ +A
Sbjct: 322 PTVISYTTMIKGYFA---VDRINDGLRLLEEMKSVGIKPNNVTYTTLLPDLCDAGKMTEA 378
Query: 295 FYLYRIMYRRNVLP-DLVTYTTLMNGLCKEGKVREAHQLFHRMV---------HRG---- 340
+ + M RR + P D + L+N CK G ++ A + M+ H G
Sbjct: 379 KDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVLDGMIKLSIPSEAGHYGVLIE 438
Query: 341 ------------------LSPDIV------------SYNTLIFAYCKEGKMQESKSLLYE 370
+ DI+ +YN +I C G+ +++ L +
Sbjct: 439 NFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNPVIQYLCSHGQTGKAEILFRQ 498
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
++ G+ D ++ G+ KEG SA ++ + R G+ D Y LI + +
Sbjct: 499 LLKKGV-EDPLAFNNLICGHAKEGTPDSAFEILKIMGRKGIPRDADAYRLLIESYLRKGE 557
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
P A + L+ + +DG++P ++ +MESL + V A + MV++ +K ++
Sbjct: 558 PADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAK 617
Query: 491 LICCFCGIGRSGEAVSLMDEMLES 514
++ G EA+ +D ++ S
Sbjct: 618 ILEALLMRGHEEEALGRIDLLMSS 641
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 226/502 (45%), Gaps = 11/502 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
Q + SAL FN + D + P Y +++ + A ++ ++ + P
Sbjct: 337 AQGNLDSALNLFNKITED-GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMK--LNGIPP 393
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
SV L+ Y+K L E+ K F + +D G +I + N +++ L K +
Sbjct: 394 SVFNVNSLLR-------GYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 445
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D+ + + M G+ PN ++N + C+ G++D + + P++VTY+ L
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I KKG A L+ M N+ P T+ T++NGLCK G++ EA + G
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P ++YN+++ + KEG + + ++ EM G+ P+ T ++ G+ K R+ AL
Sbjct: 566 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
E++ G+ + Y LI C+ +A L + + G P+ +YN ++
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
+++ AL+ +M++ I L TY LI GR A L EML G++PD
Sbjct: 686 DLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
VL+NG C + + A +L +K YN + + +G+L + L
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805
Query: 582 LRLGFAPNNLTCKYMIHSLWKG 603
L G P+++T +I+ +KG
Sbjct: 806 LDRGLVPDDVTYDILINGKFKG 827
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 244/563 (43%), Gaps = 54/563 (9%)
Query: 90 LGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNK-FSFAMKM 148
L + + LL +D SAL +F + YC+++HIL + + A K+
Sbjct: 58 LSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKL 117
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNW------------AYVKVGLIRESFKTFRKT 196
L V D P V LI+C + ++ AY++ I + F
Sbjct: 118 LNRYVSGDSD-PSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAM 176
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+ P + N LL L++ N I + +Y +M GI + T +++ K G V
Sbjct: 177 ICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRV 236
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP-------- 308
++ + + +E G D Y+ +I + CKK N L M R +P
Sbjct: 237 EEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSV 296
Query: 309 ---------------------------DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+LV T+LM G C +G + A LF+++ GL
Sbjct: 297 IVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGL 356
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P+ V+Y+ LI C G ++++ L +M NGI P F +++GY K A
Sbjct: 357 FPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASK 416
Query: 402 LVVELQRFGVSISRDIYDYLIVA--LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L E GV+ +I+ Y I+ LC+ + A SLL+ + G VP++ YN+++
Sbjct: 417 LFDEAVDCGVA---NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 473
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
C+ ++ A + +M+ R++KP++ TY LI G S +A+ L D+ML + P
Sbjct: 474 HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 533
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ING C +++A L F ++ I +YN++ + F ++G++ + + +
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593
Query: 580 RFLRLGFAPNNLTCKYMIHSLWK 602
G +PN +T +I+ K
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCK 616
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 184/399 (46%), Gaps = 25/399 (6%)
Query: 48 LYNFLPETQNPNKIV--DLICSSLKKGDSHLT------LLQNDLKPLLPHLGAHEISRVL 99
L N + + PN + D+I +KG+ + +L DLKP ++ + I
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKP---NVVTYSILIDG 508
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVK 157
+ DS AL F+ + + L I PT + I++ L + S A L +E +
Sbjct: 509 NFKKGDSEKALDLFDQMLS-LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIP 567
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
C + ++ ++K G I + +R+ + G P++V+ L+NG K
Sbjct: 568 SCM----TYNSIVD-------GFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCK 616
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
N ID + +EM G+ + ++ L FCK D++ ++ E G P+ +
Sbjct: 617 SNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIV 676
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
YN++IS + + A Y+ M + DL TYTTL++GL KEG++ A L+ M+
Sbjct: 677 YNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEML 736
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+G+ PDI++++ L+ C +G+++ ++ +L EM + P ++ GY +EG L
Sbjct: 737 SKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLK 796
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
A L E+ G+ YD LI + +R + S
Sbjct: 797 EAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLSRPS 835
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 143/283 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + E+ + L+ GF PS ++ N +++G +K ID VY EM G+ PN
Sbjct: 546 KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L + FCK+ +D +++ E+G + D+ Y+ LI +CK+ + A L+ +
Sbjct: 606 TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ + Y ++++G + A + +M++ + D+ +Y TLI KEG++
Sbjct: 666 LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L EM+ GI PD T ++V G +G+L +A ++ E+ R ++ S IY+ L
Sbjct: 726 VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
I ++ A +L + + G VP Y+ L+ K D
Sbjct: 786 IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGD 828
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 172/350 (49%), Gaps = 36/350 (10%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
W Y G I E+ K F K L+ G + I +++ KL + + + +++E+ G+
Sbjct: 294 W-YGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLV 352
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N HT+ L H C +G +D + +++ +G D +LV +NTLI+ YCKKG +++A +
Sbjct: 353 ANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRM 412
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+M ++ D+ TY T+ GLCK + EA + MV +G+ P+ VS+ +I +CK
Sbjct: 413 QDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCK 472
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
EG + E++ + +M G P+ T ++ GY K+G+L A L E++ G ++ DI
Sbjct: 473 EGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIG--MTSDI 530
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y Y L+ C V +AL L +E+
Sbjct: 531 Y---------------------------------TYTTLVHGECVFGKVEEALTLLNEVC 557
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+ + S+ TY A+I GRS EA L DEM+ +G+ PD ++ L+
Sbjct: 558 RKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 195/416 (46%), Gaps = 4/416 (0%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
S F+K ++ ++ S +++GL K +++ + EM GI PN T+N L +
Sbjct: 199 SLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVN 258
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
+ K D + VN L +E + + TY LI Y G++ +A ++ M R V
Sbjct: 259 AYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEA 318
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+ +T++++ CK G ++ A LF + RGL + +Y LI C G++ ++ L+
Sbjct: 319 DIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLV 378
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA--LC 426
EM G+ + ++ GY K+G + AL + +++ G DI+ Y +A LC
Sbjct: 379 NEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKG--FENDIFTYNTIAGGLC 436
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ NR A L + + G P+ + +++ CK ++ +A + +M + KP++
Sbjct: 437 KLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVV 496
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LI + G+ EA L DEM GM D L++G C+ V +A LL
Sbjct: 497 TYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEV 556
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K +Y A+ + +++G + L + G P++ ++ +L K
Sbjct: 557 CRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 170/337 (50%), Gaps = 9/337 (2%)
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGL 185
++ Y L++ + K + A K+ +++E + + VF +IS W K+G
Sbjct: 285 AATYTLLIEWYGSSGKIAEAEKVFEKMLE--RGVEADIHVFTSIIS------WQ-CKLGN 335
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++ +F F + + G + + L++G +D + EM G+ N FN
Sbjct: 336 MKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNT 395
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + +CK G +D+ + +E++GF+ D+ TYNT+ CK R +A M +
Sbjct: 396 LINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKG 455
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
V P+ V++T +++ CKEG + EA ++F M +G P++V+YNTLI Y K+GK++E+
Sbjct: 456 VDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAY 515
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM G+ D +T +V G G++ AL L+ E+ R G++IS Y +I L
Sbjct: 516 RLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGL 575
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
++ R A L + + G P +Y L+ +L K
Sbjct: 576 SKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 248/548 (45%), Gaps = 31/548 (5%)
Query: 69 LKKGDSHLTLLQNDLKPLL-------------PHLGAHEISRVLLRCQSDSVS--ALTFF 113
LK+G S L +Q L P + P+ + S VL R + +S AL FF
Sbjct: 3 LKEGCSLLLKVQKPLIPFVLNTNLNVNLLTESPNHAEIKESAVLKRLRQESCVPLALHFF 62
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT 173
+ N K T + +++ LA + + +L ++ C S D+F +IS
Sbjct: 63 KSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC--SEDLFISVIS-- 118
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
Y +VGL + + F + + G PS+ N +L+ LL N I + VY +M R
Sbjct: 119 -----VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 173
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
G PN T+N+L CKN VD L ++ +G P+ V+Y T+ISS C+ G + +
Sbjct: 174 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKE 233
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
L P + Y L+NGLCKE + +L MV +G+SP+++SY+TLI
Sbjct: 234 GRQL-----AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLIN 288
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVS 412
G+++ + SLL +M+ G +P+ T +V+G G AL++ ++ R FG+
Sbjct: 289 ELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQ 348
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y+ L+ C A S+ + + G P++ Y L+ K S+ A+ +
Sbjct: 349 PNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYI 408
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++M+ P++ Y +++ C + EA SL++ M + P I G C
Sbjct: 409 WNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 468
Query: 533 EKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
++ AE + ++++ + +YN + + A+ + + L + G +
Sbjct: 469 AGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTS 528
Query: 592 TCKYMIHS 599
T ++H
Sbjct: 529 TYNTLLHG 536
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 176/400 (44%), Gaps = 13/400 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P S Y +++ L + ++++ E+VE K +V + LI+ +
Sbjct: 242 EPVVSVYNALINGLCKERDYKGGVELMSEMVE--KGISPNVISYSTLINELSNS------ 293
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPNTH 241
G I +F + L G P+I + + L+ G ++ +M R G+ PN
Sbjct: 294 -GQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVV 352
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L FC +G++DK +EE G P++ TY +LI+ + K+G L A Y++ M
Sbjct: 353 AYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P++V YT+++ LC+ K +EA L M +P + ++N I C G++
Sbjct: 413 LTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 472
Query: 362 QESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ + +M P+ T ++ G K R+ A L E+ GV S Y+
Sbjct: 473 DWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNT 532
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV--D 478
L+ C P A L+ ++ +G P N ++ + CK A+ + D +
Sbjct: 533 LLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGR 592
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
R +P + +Y +I C + V L + M+ ++P
Sbjct: 593 RKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 144/333 (43%), Gaps = 6/333 (1%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F +T+ +I G+++ YL + M + + ++++ + G A
Sbjct: 71 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 130
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++F+R+ G P + YN ++ E ++Q + +M +G P+ FT ++++
Sbjct: 131 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 190
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K ++ A L+VE+ G + Y +I ++C+ L ER + P +
Sbjct: 191 CKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAER-----FEPVV 245
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+YN L+ LCK + L EMV++ I P++ +Y LI G+ A SL+ +
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDG 569
ML+ G P+ L+ G + A + + F + + +YN + F G
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHG 365
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ K + + +G +PN T +I+ K
Sbjct: 366 NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTK 398
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 9/154 (5%)
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
CP ++ + +L+ N GL RE F G + S + N LL+G
Sbjct: 488 CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-------GVEWSTSTYNTLLHGSCNA 540
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE--EEGFDPDLV 276
Q+ +M G P+ T N++ +CK G ++ L+ + + PD++
Sbjct: 541 GLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVI 600
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
+Y +I C+ D L+ M ++P L
Sbjct: 601 SYTNVIWGLCRSNCREDGVILFERMISERIIPIL 634
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 207/456 (45%), Gaps = 44/456 (9%)
Query: 162 SVDVFQD-----LISCTEDCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
SV VF++ LI C +CN A + I+E+ F + G +P+I+S + LL+
Sbjct: 246 SVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLH 305
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
G C + M GI PN FNIL + + + G +DK E ++ +G P
Sbjct: 306 GYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIP 365
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC------------ 321
D VT+ T+ISS C+ GRL+DA + + M V P Y L+ G C
Sbjct: 366 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELI 425
Query: 322 ------------------------KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
KEG+V E + MV G P++V++N+L+ YC
Sbjct: 426 SEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCL 485
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G M+E+ +LL M GI P+ + +V GY K GR+ AL + ++ GV + +
Sbjct: 486 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 545
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ ++ L Q R AA + + + G S++ Y ++ LC+ + +A +L +++
Sbjct: 546 YNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLF 605
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
N+K + T+ +I +GR EA L + G++P ++I+ E+
Sbjct: 606 AMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYE 665
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+A+ L K + D+ N + M + +++K
Sbjct: 666 EADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAK 701
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 213/452 (47%), Gaps = 14/452 (3%)
Query: 159 CPH------SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
CPH ++ + LI C Y ++ + F + L G P + S N L+
Sbjct: 112 CPHAAADAPTIYTYNILIDC-------YRRMHRPELALAVFGRLLRTGLGPDVCSYNTLI 164
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G K +D+ ++++ +M + P+ T+N L CK ++ K LE++ + G
Sbjct: 165 DGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIR 224
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P+ TYN+LI Y G ++ +++ M ++P +V + ++ LC+ +++EA +
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 284
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
F MV +G P+I+SY+TL+ Y EG SL+ M+ GI P+ I++ Y +
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYAR 344
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + A+ + ++Q G+ + +I +LC+ R A + G PS +
Sbjct: 345 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAV 404
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNI-KPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y L++ C + A L EM++++I P + + ++I GR E +MD M
Sbjct: 405 YRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLM 464
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+++G P+ L+ GYC+ ++ +A ALL A + Y + + + ++G +
Sbjct: 465 VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRI 524
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + + L G P ++ ++H L++
Sbjct: 525 DDALTVFRDMLHKGVKPTSVLYNIILHGLFQA 556
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 139/306 (45%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + ++N L K + + + + M + G PN TFN L +C G++++
Sbjct: 436 PGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 495
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L+ + G +P+ Y TL+ YCK GR++DA ++R M + V P V Y +++GL +
Sbjct: 496 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQ 555
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A ++FH M+ G + I +Y ++ C+ E+ LL ++ + D T
Sbjct: 556 ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 615
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ K GR A L + +G+ + Y+ +I L ++ A +L +
Sbjct: 616 FNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVE 675
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + N ++ L K VA A + + N+ ST L F G+
Sbjct: 676 KSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCR 735
Query: 503 EAVSLM 508
E + L+
Sbjct: 736 EHIKLL 741
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 151/337 (44%), Gaps = 11/337 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH-SVDVFQ 167
AL FN + D+ + P+ + Y ++ + + A +++ E++ KD P V F
Sbjct: 386 ALHKFNHMV-DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMN--KDIPPPGVKYFS 442
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
+I+ K G + E + G +P++V+ N L+ G + +++ + +
Sbjct: 443 SIIN-------NLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 495
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ M IGI PN + + L +CKNG +D + +G P V YN ++ +
Sbjct: 496 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQ 555
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
R A ++ M + TY ++ GLC+ EA+ L ++ + DI++
Sbjct: 556 ARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 615
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
+N +I A K G+ QE+K L + G+ P T +++ KE A NL + ++
Sbjct: 616 FNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVE 675
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+ G + + ++++ L + A++ L I ++
Sbjct: 676 KSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDEN 712
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I ++ FR L G +P+ V N +L+GL + +++ EM G
Sbjct: 517 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTV 576
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ ++ C+N D+ N LEK+ D++T+N +IS+ K GR +A L+
Sbjct: 577 SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELF 636
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++P + TY +++ L KE EA LF + G +PD N ++ K+
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKK 696
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ ++ + L + N + + T ++ + +EG+ + L+ +F
Sbjct: 697 AEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLLPAKYQF 747
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLI------SCTED 175
+KPTS Y +I+H L + + A KM E++E S+ + ++ +CT++
Sbjct: 539 VKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE--SGTTVSIQTYGVVLGGLCRNNCTDE 596
Query: 176 CNW----------------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
N A +KVG +E+ + F G P++ + N +++
Sbjct: 597 ANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMIS 656
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
L+K ++ ++ + + G P++ N + + K +V K + +L I+E
Sbjct: 657 NLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTL 716
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ T + L S + ++G+ + L Y+
Sbjct: 717 EASTISLLASLFSREGKCREHIKLLPAKYQ 746
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 192/401 (47%), Gaps = 3/401 (0%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
S N LL L I Q+++EM P+ T+ I+ H +C +++ L ++
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G + + V Y ++I+ C +G+++DA + M V+ D +TT+M+G C++G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A F M RGL+ D V+Y LI C+ G+++E++ +L EM G+ D T ++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G++ A + ++ + V+ + Y L LC+ AA LL + G
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
++ YN L+ LCK ++ A+ +M + +KP + TY +I C A S
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ EML+ G+ P VL+NG+CM V + LL + +K +T +YN++ +
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ ++ E+ K L PN T +I K K
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 206/430 (47%), Gaps = 9/430 (2%)
Query: 162 SVDVFQDLISCTEDCNW-----AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+V +FQ+L C++ A G I+++ + F ++ P +V+ +++G
Sbjct: 241 AVQLFQELPE-KNTCSYNILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYC 296
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
L+ ++ ++ EM G+ N + + + C G V +E + G D
Sbjct: 297 TLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAA 356
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+ T++S +C+KG L A + M +R + D VTYT L+NGLC+ G+++EA ++ M
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM 416
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+GL D V+Y LI YCK GKM E+ + +M+ + P+ T + G K+G +
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+A L+ E+ G+ ++ Y+ LI LC+ A + + + G P + Y +
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ +LC+ + A L EM+D+ IKP++ TY L+ FC GR L++ MLE +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P++ L+ YC+EK++ + + + + +YN + + ++ + +
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656
Query: 577 LQKRFLRLGF 586
+ GF
Sbjct: 657 FHSEMIEKGF 666
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 37/364 (10%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM + G+ + T+ L + C+ G++ + L+++E++G D D VTY LI YCK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +AF ++ M ++ V P++VTYT L +GLCK+G V A++L H M +GL +I +
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+LI CK G ++++ + +M G+ PD +T
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT------------------------- 532
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
Y +I ALCQ A SLL+ + G P++ YN LM C V
Sbjct: 533 ----------YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
L + M+++NI P+ +TY +L+ +C + ML ++P+ +LI
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL--QKRFLRLG 585
G+C +++ +A +K SYNA+ + + ++ L + R RL
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLT 702
Query: 586 FAPN 589
P+
Sbjct: 703 AEPD 706
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 153/308 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + E+F K + P++V+ L +GL K + ++ EM G+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + CK G++++ + ++E G PD+ TY T+I + C+ L+ A L
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P +VTY LMNG C G+V +L M+ + + P+ +YN+L+ YC E
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + + M+ + P+ T I+++G+ K + AL E+ G ++ Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + + A L E++ +D ++YN ++ D++ L L DE+V+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Query: 479 RNIKPSLS 486
+ S++
Sbjct: 734 VTLVKSIA 741
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 7/276 (2%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA QLF + + + SYN L+ A C G+++++ L EM PD T I+V
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMV 292
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY L +A+ L+ E+ G+ ++ Y +I LC + + A ++E + G V
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
++ +M C+ +A A DEM R + TY ALI C G EA +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ EM + G+ D+ VLI+GYC + +A + +K + +Y A+ + +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
GD+ EL G N T +I+ L K
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 226/494 (45%), Gaps = 36/494 (7%)
Query: 142 FSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF 201
F MK + LVK+ S+ + D N + + L+ F L +G
Sbjct: 84 FIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVIN-SLCHLKLVAFGFSVLGTMLKLGL 142
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS+V+ L+NGL + + ++ + + + G + T+ +L + CK G + G
Sbjct: 143 EPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVG 202
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+L K+EE ++P++V Y+T++ CK G +++A L M + + P+LVTYT L+ GLC
Sbjct: 203 WLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC 262
Query: 322 -----------------------------------KEGKVREAHQLFHRMVHRGLSPDIV 346
KEGK+ +A + M+ G PD+
Sbjct: 263 NFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVF 322
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN+LI YC + +M E+ + M+ G PD ++ G+ K + A++L+ E+
Sbjct: 323 TYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEM 382
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ G + + LI CQ RP AA L + + G VP+L+ +++ LCK +
Sbjct: 383 IKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLL 442
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
++AL L M N+ ++ Y ++ C G+ A+ L + G+ + ++
Sbjct: 443 SEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIM 502
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
ING+ + ++KAE LL + + D+ +YN + ++++ ++ GF
Sbjct: 503 INGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGF 562
Query: 587 APNNLTCKYMIHSL 600
+ + T + +I+ L
Sbjct: 563 SVDATTTEMIINYL 576
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 213/457 (46%), Gaps = 9/457 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L ++P+ + ++++ L A+ ELV+ V+ + DV + C
Sbjct: 140 LGLEPSVVTFTILINGLCVKGDVGRAV----ELVDHVEKTGYRSDVKTYGVLINGLC--- 192
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K+G E+ RK + + P++V + +++GL K + + + EM GI PN
Sbjct: 193 --KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPN 250
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L C G + L+++ + G PDL + N L+ CK+G++ A +
Sbjct: 251 LVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIG 310
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +PD+ TY +L++ C + ++ EA ++F MV RG PDIV+Y +LI +CK
Sbjct: 311 FMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIK 370
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ LL EM+ G PD T ++ G+ + GR L+A L + + ++G +
Sbjct: 371 NINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCA 430
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC+ A SL + + ++ IY+ +++ +C + AL L + +
Sbjct: 431 IILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAK 490
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++ ++ Y +I F G +A L+ M E+G +PDS V + G E+++ ++
Sbjct: 491 GLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARS 550
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
L K D + + N + + ++L E
Sbjct: 551 IKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELRE 587
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 171/387 (44%), Gaps = 1/387 (0%)
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDL 275
KL ID+ + M ++ P+ F +L K ++++ G PD
Sbjct: 52 KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
N +I+S C + F + M + + P +VT+T L+NGLC +G V A +L
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ G D+ +Y LI CK GK E+ L +M P+ ++ G K+G
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL L +E+ G+ + Y LI LC R A SLL+ + + G +P L+ N
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L++ LCK + A + M+ P + TY +LI +C + EA + + M+ G
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG 351
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
LPD LI+G+C K++NKA LL K D ++ + F + G
Sbjct: 352 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAK 411
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL + G PN TC ++ L K
Sbjct: 412 ELFLNMHKYGQVPNLQTCAIILDGLCK 438
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 132/336 (39%), Gaps = 45/336 (13%)
Query: 52 LPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALT 111
+P+ Q+ N +VD++C K +++ +S + +
Sbjct: 283 MPDLQSLNILVDVLCKEGK----------------------------IMQAKS-VIGFMI 313
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
V + YCL N+ A ++ +V + C + + LI
Sbjct: 314 LVGEVPDVFTYNSLIDRYCL-------QNQMDEATRVFELMVS--RGCLPDIVAYTSLIH 364
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ K+ I ++ + + VGF P +V+ L+ G ++ +++ M
Sbjct: 365 -------GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNM 417
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
+ G PN T I+ CK+ + + +E+ D ++V Y+ ++ C G+L
Sbjct: 418 HKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKL 477
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
N A L+ + + + ++ YT ++NG K+G + +A L M G PD +YN
Sbjct: 478 NTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVF 537
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+ E ++ S L M G D T ++I+
Sbjct: 538 VQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 194/389 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E F+ + + + G P+ + L+ GL + + + + +EM R G+ + + F
Sbjct: 199 GFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVF 258
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+L CKNG + + +++ G++P++VT L+ YC KG ++ A L+ +
Sbjct: 259 TVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGE 318
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
D+ TY ++G CK G+VR+A ++F M G+ P+IV+YN+LI CK G++
Sbjct: 319 WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSG 378
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ M +G+ PD TC I++ G K RL A+ L +L G++ Y LI
Sbjct: 379 AWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIH 438
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C R A +LL + VP + Y+ L++ LC+ +++A L +EM + P
Sbjct: 439 GCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLP 498
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
TY L+ EAV L ++M++ G+ PD ++I+GYC + +++A L
Sbjct: 499 DTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
K + D +Y +FN + G S
Sbjct: 559 REMHMKNLVPDIVTYTILFNAVFKSGSNS 587
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 203/433 (46%), Gaps = 12/433 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G + SF F K L G+ V+ N +L GL + + + ++E+ G N
Sbjct: 82 FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKI------EEEGF--DPDLVTYNTLISSYCKKGRL 291
++ IL + C+NG V++ L I E++GF ++V Y+ +I C+ G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
++ F Y M V P+ TY +L+ GLC GK E L M+ RGL + + L
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I CK G + E++ + EM+ G P+ TC ++ GY +G + A L + +G
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG- 320
Query: 412 SISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
RD++ Y I C+ R A + + + ++G VP++ YN L++ LCK V+ A
Sbjct: 321 -FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ M + P + T L+ C R +A+ L ++++ESG+ PD +LI+G
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C + + +A LL K + +Y+ + + G +S L G P+
Sbjct: 440 CCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPD 499
Query: 590 NLTCKYMIHSLWK 602
+T ++ +LWK
Sbjct: 500 TITYSILLDALWK 512
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 190/379 (50%), Gaps = 12/379 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ L KF ++ E++ D SV VF LI K
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDV--SVYVFTVLID-------GLCKN 268
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ E+ + F + ++ G++P+IV+C L+ G +D ++++ +G G + T+
Sbjct: 269 GMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTY 328
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+ H +CK G V +++ EG P++VTYN+LI CK G ++ A+ + + M+R
Sbjct: 329 NVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHR 388
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+VT L++GLCK ++ +A LF+++V GL+PD+ SY LI C +M E
Sbjct: 389 SGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGE 448
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +LL +M + P T ++ G + GR+ +A L+ E+ G Y L+
Sbjct: 449 AMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLD 508
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
AL + A L ++ + G P + Y +++ CK + + +A+ L EM +N+ P
Sbjct: 509 ALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVP 568
Query: 484 SLSTYRALICCFCGIGRSG 502
+ TY L F + +SG
Sbjct: 569 DIVTYTIL---FNAVFKSG 584
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 189/408 (46%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+ ++V + +++ L + +D+ ++ Y EM G+CPN T+ L C G + G
Sbjct: 182 KGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFG 241
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
++++ G D + + LI CK G L +A ++ M R P++VT T LM G C
Sbjct: 242 LVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYC 301
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+G V A +LF + G D+ +YN I YCK G+++++ + EM G+ P+
Sbjct: 302 LKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIV 361
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ K G + A +V + R G++ L+ LC+ R A L ++
Sbjct: 362 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 421
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G P + Y L+ C + +A+ L +M +N+ P + TY LI C GR
Sbjct: 422 VESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRI 481
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A L++EM G LPD+ +L++ ++ +++A L K+ D Y +
Sbjct: 482 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 541
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKFQ 609
+ + + + + + L + P+ +T + ++++K ++
Sbjct: 542 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYE 589
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 8/290 (2%)
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G V + +F +++ RG D V+ NT++ C G + ++ E++ NG + +
Sbjct: 86 GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145
Query: 384 QIIVQGYGKEGRLLSALNLVVELQR--------FGVSISRDIYDYLIVALCQDNRPFAAT 435
I++ G + GR+ A+NL+ +++ F V + +Y +I LC++
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ +G P+ Y L+ LC + L DEM+ R + S+ + LI
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G EA + DEM+ G P+ C L+ GYC++ +V+ A L + D
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YN + + + G + + + R G PN +T +I L K E
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGE 375
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 14/222 (6%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S + A+ FN + + P +Y +++H + + AM +L ++ L P
Sbjct: 406 CKSKRLDQAILLFNQLVES-GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDM-HLKNLVP 463
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H V SC D + G I +++ + G P ++ + LL+ L K
Sbjct: 464 HIVTY-----SCLID---GLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++ +M + G+ P+ + I+ +CK+ +D+ ++ + PD+VTY
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTI 575
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++ K G + + ++ N P ++ Y + LCK
Sbjct: 576 LFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCK 614
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 221/473 (46%), Gaps = 10/473 (2%)
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCT---EDCNWAYVKVGLIRESFKTFRK 195
+F +M+ LC+ + VK+ ++D+FQ + S ++ + ++R T
Sbjct: 38 GTQFLISMRNLCKSGK-VKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAI 96
Query: 196 TL------DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+L +G + ++ N ++N L +L + + V M ++G+ P T L +
Sbjct: 97 SLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALING 156
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C G+V + G ++ +E+ + D+ TY LI+ CK G A R M RN P+
Sbjct: 157 LCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPN 216
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+V Y+T+M+GLCK+G V EA L M +G+ P++V+Y LI C G+ +E+ SLL
Sbjct: 217 VVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLD 276
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
EM+ G+ D T I+V + KEG+++ A +++ + G Y+ LI C N
Sbjct: 277 EMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN 336
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ A + + G +P + ++ L+ CK ++ + L +EM P + T+
Sbjct: 337 KMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWT 396
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI FC GR A L M + G +P+ Q C V+++G C +++A +L K
Sbjct: 397 TLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKS 456
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ Y+ + + G L+ EL G N T MI L K
Sbjct: 457 NLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCK 509
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 216/477 (45%), Gaps = 8/477 (1%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ ++ L++ ++ ++ A + LVK S+ + D I+ N ++
Sbjct: 74 PSVKDFTLLLGVIVRLKHYTTA-------ISLVKHIFSSLGIEADTITLNIVIN-CLCRL 125
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L+ F +G +P++++ L+NGL + Q + + M ++ + +T+
Sbjct: 126 KLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTY 185
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+L + CK GD +L K+EE + P++V Y+T++ CK G +++A L M
Sbjct: 186 GVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSG 245
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ V P+LVTY L+ GLC G+ +E L M+ G+ D+ + N L+ A+CKEGK+ +
Sbjct: 246 KGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQ 305
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+KS++ M+ G PD FT ++ Y + ++ A+ + + G ++ LI
Sbjct: 306 AKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIH 365
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+D LLE + + G+VP + + L+ C+ A L M P
Sbjct: 366 GWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVP 425
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L T ++ C EAVSL + M +S + + I +L++G C +N A L
Sbjct: 426 NLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELF 485
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K + +Y + + G L K +L G P+N T + L
Sbjct: 486 SSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGL 542
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 189/395 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + RK + ++P++V + +++GL K + + + EM G+ PN
Sbjct: 194 KTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLV 253
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L C G + L+++ + G DL T N L+ ++CK+G++ A + M
Sbjct: 254 TYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFM 313
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TY +L++ C + K+ EA ++FH MV RG PDIV + +LI +CK+ +
Sbjct: 314 ILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNI 373
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL EM G PD T ++ G+ + GR L+A L + + ++G + +
Sbjct: 374 NKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVI 433
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ N A SL E + + ++ IY+ L++ +C + A L + + +
Sbjct: 434 LDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGL 493
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ ++ TY +I C G +A L+ M E+G LPD+ V + G +K++ ++
Sbjct: 494 QINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIK 553
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
L K D + N + + +++ E
Sbjct: 554 YLTIMRDKGFSVDAATTEITINYLSTNEGDTRIRE 588
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 172/388 (44%), Gaps = 1/388 (0%)
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI-EEEGFDPDL 275
K+ ID+ +++ M + P+ F +L V + ++ I G + D
Sbjct: 53 KVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADT 112
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+T N +I+ C+ + F + M++ + P ++T T L+NGLC +G V +A L
Sbjct: 113 ITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDH 172
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M D+ +Y LI CK G + L +M P+ I+ G K+G
Sbjct: 173 MEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ ALNL E+ GV + Y LI LC R SLL+ + + G L+ N
Sbjct: 233 VSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNI 292
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+++ CK V A + M+ P + TY +LI +C + EA+ + M+ G
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
LPD + LI+G+C +K++NK LL AK + D ++ + F + G
Sbjct: 353 CLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAK 412
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
EL + G PN TC ++ L KG
Sbjct: 413 ELFLNMHKYGQVPNLQTCAVILDGLCKG 440
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 179/356 (50%), Gaps = 5/356 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV---YEEMGRIGICP 238
K G +R++ + G PS+V+ N L++G K + + V +EM + GI P
Sbjct: 200 KTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISP 259
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TFN+L + +CK ++ E++ + G ++VTY +L+S C++G++ D+ L
Sbjct: 260 NVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLV 319
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M L L T +++NG CK+G + EA M +G+ P++V+YNTLI Y +
Sbjct: 320 EEMEELG-LATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRL 378
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM+E+ + M G GI PD T ++ G+ S L+ E++ GV Y
Sbjct: 379 GKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTY 438
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI ALC A LL+ + + G P YN ++ C+ A ++ M
Sbjct: 439 NVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEK 498
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+ ++ T + FC +G+ EA +++EMLE G++P+ +I +IN +EK
Sbjct: 499 CKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPN-RITYEIINSGMIEK 553
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 188/397 (47%), Gaps = 8/397 (2%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
++PS S N LL L++ + +D + + R + P+ TFNI+ CK G + K
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAG 208
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY---LYRIMYRRNVLPDLVTYTTLM 317
+ + G P +VTYNTLI Y K GR ++ L + M + + P++VT+ L+
Sbjct: 209 DVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLI 268
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM--MGNG 375
NG CKE + A ++F M G+ ++V+Y +L+ C+EGK+++S L+ EM +G
Sbjct: 269 NGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA 328
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
P T ++ G+ K+G ++ A V + + G+ + Y+ LI + + AT
Sbjct: 329 TLP---TLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEAT 385
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ + G P ++ YN L+ L DEM + +K L TY LI
Sbjct: 386 AAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGAL 445
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
C G +AV L+DEM+E G+ P + +ING+C + D A + K + +
Sbjct: 446 CCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANV 505
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ N F + G + + + L G PN +T
Sbjct: 506 VTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRIT 542
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 184/371 (49%), Gaps = 4/371 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK--- 258
P + N +++GL K + + V ++M G+ P+ T+N L + K G K
Sbjct: 185 SPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYH 244
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
V+ L+++ + G P++VT+N LI+ YCK+ + A ++ M + + ++VTYT+L++
Sbjct: 245 VDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVS 304
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLC+EGKV ++ +L M GL+ + + N+++ +CK+G M E++ + M G+ P
Sbjct: 305 GLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKP 363
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++ GY + G++ A + G+S Y+ LI + + LL
Sbjct: 364 NVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLL 423
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G L YN L+ +LC V A+ L DEMV+ ++P TY A+I FC
Sbjct: 424 DEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEK 483
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G + A + M + + C V + +C +++A +L +K + + +Y
Sbjct: 484 GDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITY 543
Query: 559 NAVFNMFAEDG 569
+ + E G
Sbjct: 544 EIINSGMIEKG 554
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 163/359 (45%), Gaps = 4/359 (1%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ + N L + VD PD T+N +IS CK G+L A +
Sbjct: 151 PSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDV 210
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCK---EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ M ++P +VTY TL++G K GK+ L M G+SP++V++N LI
Sbjct: 211 AKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLING 270
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
YCKE + + + EM +GI + T +V G +EG++ ++ LV E++ G++ +
Sbjct: 271 YCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-T 329
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ ++ C+ A ++ + Q G P++ YN L++ + + +A K
Sbjct: 330 LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKG 389
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
M + I P + TY LI F L+DEM E+G+ D VLI C +
Sbjct: 390 AMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKG 449
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+V KA LL + +YNA+ N F E GD +++ R + N +TC
Sbjct: 450 EVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTC 508
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 4/332 (1%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ P + N L+++ + R++ A +R RR V PD T+ +++GLCK G++R+A
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAG 208
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCK---EGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+ M GL P +V+YNTLI Y K GKM LL EM GI P+ T +++
Sbjct: 209 DVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLI 268
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY KE + +A+ + E+++ G+ + Y L+ LC++ + + L+E + + G +
Sbjct: 269 NGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG-L 327
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+L N ++ CK + +A D M + +KP++ TY LI + +G+ EA +
Sbjct: 328 ATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAA 387
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M G+ PD + LI G+ D LL + D +YN +
Sbjct: 388 KGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCC 447
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
G++ K ++L + +G P + T +I+
Sbjct: 448 KGEVRKAVKLLDEMVEVGLEPKHRTYNAIING 479
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPH 161
+S+ +A+ F ++ I Y +V L K +MK++ E+ EL + P
Sbjct: 274 ESNITAAIKVFEEMRQH-GIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPT 332
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V + K G++ E+ G +P++V+ N L++G +L +
Sbjct: 333 LNSVLN-----------GFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKM 381
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ M GI P+ T+N L F + D V+G L++++E G DLVTYN L
Sbjct: 382 KEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVL 441
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I + C KG + A L M + P TY ++NG C++G + AH + RM
Sbjct: 442 IGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKK 501
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
++V+ N + +CK GKM E+ +L EM+ G+ P+ T +II G ++G
Sbjct: 502 RANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG------- 554
Query: 402 LVVELQRFGVSISRDI 417
V +++ + +S+++
Sbjct: 555 YVPDIRGYAADVSKNL 570
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 6/318 (1%)
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
AF L Y R P + L+ L + +V A + F + R +SPD ++N +I
Sbjct: 138 AFLLAGADYPR-YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVIS 196
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY---GKEGRLLSALNLVVELQRFG 410
CK G+++++ + +M G G+ P T ++ GY G+ G++ L+ E+ + G
Sbjct: 197 GLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAG 256
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+S + ++ LI C+++ AA + E + Q G ++ Y L+ LC+ V D++
Sbjct: 257 ISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSM 316
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L +EM + + +L T +++ FC G EA +D M + GM P+ LI+GY
Sbjct: 317 KLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGY 375
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
+ +A A G A K D ++YN + F D + L G +
Sbjct: 376 QRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADL 435
Query: 591 LTCKYMIHSL-WKGMERK 607
+T +I +L KG RK
Sbjct: 436 VTYNVLIGALCCKGEVRK 453
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 250/536 (46%), Gaps = 21/536 (3%)
Query: 76 LTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHI 135
L +L++D +P G + V L SD L FN +K+D I P+ Y +++
Sbjct: 168 LNILESDFRPSKFMYGKAIQAAVKL---SDVGKGLELFNRMKHD-RIYPSVFIYNVLIDG 223
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
L + + A ++ E+ L + S+ + LI Y K G +SFK +
Sbjct: 224 LCKGKRMNDAEQLFDEM--LARRLLPSLITYNTLID-------GYCKAGNPEKSFKVRER 274
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
+PS+++ N LL GL K ++ V +EM +G P+ TF+IL + N
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
+ G E + G + T + L+++ CK+G++ A + + ++P+ V Y T
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
+++G C++G + A M +G+ PD ++YN LI +C+ G+M+ ++ + +M G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
+ P T I++ GYG++ +++ E++ G + Y LI LC+ ++ A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ + G P + IYN L++ C + DA EM+ + I+ +L TY LI
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
G+ EA L+ E+ G+ PD LI+GY +V + AL +
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKR-FLRLGFAPNNLTCKYMIH--SLWKGMERKF 608
++Y+ + ++ ++G +EL +R F + P+ L ++H ++ ME+ F
Sbjct: 635 KTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 178/337 (52%), Gaps = 6/337 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P ++ N L+ +L ++ + +M G+ P+ T+NIL + + + DK
Sbjct: 419 GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L+++E+ G P++V+Y TLI+ CK +L +A + R M R V P + Y L++G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C +GK+ +A + M+ +G+ ++V+YNTLI GK+ E++ LL E+ G+ PD
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
FT ++ GYG G + + L E++R G+ + Y +L+++LC L E
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY-HLLISLCTKE----GIELTE 653
Query: 440 RI-GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
R+ G+ P L +YN ++ + A L+ +M++++I +TY +LI +
Sbjct: 654 RLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G+ E SL+DEM M P++ +++ G+C KD
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKD 750
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 196/479 (40%), Gaps = 70/479 (14%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK R + F L+ F+PS + +KL+ + + +++ M I P+
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N+L CK ++ +++ P L+TYNTLI YCK G +F +
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY----- 355
M ++ P L+T+ TL+ GL K G V +A + M G PD +++ L Y
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 356 ------------------------------CKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
CKEGK+++++ +L M G+ P+
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ GY ++G L+ A + +++ G+ Y+ LI C+ A + ++ G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 446 YVPSLEIYN-----------------------------------ELMESLCKCDSVADAL 470
PS+E YN L+ LCK + +A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
++K +M DR + P + Y LI C G+ +A EML+ G+ + LI+G
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
M +++AE LL ++K D +YN++ + + G++ + + L + R G P
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 4/286 (1%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R D G P + N L++G I+ ++ +EM + GI N T+N L
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + + L +I +G PD+ TYN+LIS Y G + LY M R + P L TY
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
L++ KEG + +LF M L PD++ YN ++ Y G M+++ +L +M+
Sbjct: 638 HLLISLCTKEG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
I D T ++ G K G+L +L+ E+ + D Y+ ++ C+ +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
A + + G++ + I NEL+ L + +A ++ EM R
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 6/252 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++F+ ++ L G + ++V+ N L++GL + + + E+ R G+ P+ T+
Sbjct: 543 GKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTY 602
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG-RLNDAFYLYRIMY 302
N L + G+V + E+++ G P L TY+ LIS K+G L + R+
Sbjct: 603 NSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTE-----RLFG 657
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++ PDL+ Y +++ G + +A L +M+ + + D +YN+LI K GK+
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLC 717
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E +SL+ EM + P+ T IIV+G+ + +SA E+Q G + I + L+
Sbjct: 718 EVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELV 777
Query: 423 VALCQDNRPFAA 434
L ++ R A
Sbjct: 778 SGLKEEWRSKEA 789
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 131/308 (42%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+++A L+ + + P + T L++ L K + R +F ++ P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
I A K + + L M + IYP F +++ G K R+ A L E+
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ S Y+ LI C+ P + + ER+ D PSL +N L++ L K V DA
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ EM D P T+ L + ++ A+ + + ++SG+ ++ C +L+N
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C E + KAE +LG K + + YN + + + GDL + + G P++
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 591 LTCKYMIH 598
L +I
Sbjct: 425 LAYNCLIR 432
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 13/289 (4%)
Query: 316 LMNGLCKEGK-VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ L E K + EA LF + + G+ P S L+ K + + + ++ ++ +
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
P F +Q K + L L ++ + S IY+ LI LC+ R A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
L + + +PSL YN L++ CK + + +++ M +I+PSL T+ L+
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK------ 548
G +A +++ EM + G +PD+ +L +GY + KAEA LG +
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE---KAEAALGVYETAVDSGV 350
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
K Y + + + N ++G + K E+ R + G PN + MI
Sbjct: 351 KMNAY---TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
Query: 412 SISRDIYDYLIVALCQDNRPFA-ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
S+ D L+ L +++ + A L + +G PS + L++ L K +
Sbjct: 105 SLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTI 164
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ +++ + +PS Y I + G+ + L + M + P I VLI+G
Sbjct: 165 NVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGL 224
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C K +N AE L + + +YN + + + + G+ K ++++R P+
Sbjct: 225 CKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSL 284
Query: 591 LTCKYMIHSLWKG 603
+T ++ L+K
Sbjct: 285 ITFNTLLKGLFKA 297
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 192/401 (47%), Gaps = 3/401 (0%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
S N LL L I Q+++EM P+ T+ I+ H +C +++ L ++
Sbjct: 255 SYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G + + V Y ++I+ C +G+++DA + M V+ D +TT+M+G C++G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A F M RGL+ D V+Y LI C+ G+++E++ +L EM G+ D T ++
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G++ A + ++ + V+ + Y L LC+ AA LL + G
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
++ YN L+ LCK ++ A+ +M + +KP + TY +I C A S
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ EML+ G+ P VL+NG+CM V + LL + +K +T +YN++ +
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ ++ E+ K L PN T +I K K
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 206/430 (47%), Gaps = 9/430 (2%)
Query: 162 SVDVFQDLISCTEDCNW-----AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+V +FQ+L C++ A G I+++ + F ++ P +V+ +++G
Sbjct: 241 AVQLFQELPE-KNTCSYNILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYC 296
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
L+ ++ ++ EM G+ N + + + C G V +E + G D
Sbjct: 297 TLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAA 356
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+ T++S +C+KG L A + M +R + D VTYT L+NGLC+ G+++EA ++ M
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM 416
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+GL D V+Y LI YCK GKM E+ + +M+ + P+ T + G K+G +
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+A L+ E+ G+ ++ Y+ LI LC+ A + + + G P + Y +
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ +LC+ + A L EM+D+ IKP++ TY L+ FC GR L++ MLE +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P++ L+ YC+EK++ + + + + +YN + + ++ + +
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656
Query: 577 LQKRFLRLGF 586
+ GF
Sbjct: 657 FHSEMIEKGF 666
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 37/364 (10%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM + G+ + T+ L + C+ G++ + L+++E++G D D VTY LI YCK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +AF ++ M ++ V P++VTYT L +GLCK+G V A++L H M +GL +I +
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+LI CK G ++++ + +M G+ PD +T
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT------------------------- 532
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
Y +I ALCQ A SLL+ + G P++ YN LM C V
Sbjct: 533 ----------YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
L + M+++NI P+ +TY +L+ +C + ML ++P+ +LI
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL--QKRFLRLG 585
G+C +++ +A +K SYNA+ + + ++ L + R RL
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702
Query: 586 FAPN 589
P+
Sbjct: 703 AEPD 706
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 35/330 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++E+ + ++ D G V+ L++G K+ + + + V+ +M + + PN
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L+ CK GDV N L ++ +G + ++ TYN+LI+ CK G L A M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD+ TYTT++ LC+ ++ AH L M+ +G+ P IV+YN L+ +C G++
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ K LL M+ I+P+T T Y+ L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTT-----------------------------------YNSL 606
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C + + T + + + VP+ YN L++ CK ++ +AL EM+++
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ + S+Y ALI + EA L ++M
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 153/308 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + E+F K + P++V+ L +GL K + ++ EM G+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + CK G++++ + ++E G PD+ TY T+I + C+ L+ A L
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P +VTY LMNG C G+V +L M+ + + P+ +YN+L+ YC E
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + + M+ + P+ T I+++G+ K + AL E+ G ++ Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + + A L E++ ++ ++YN ++ D++ L L DE+V+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Query: 479 RNIKPSLS 486
+ S++
Sbjct: 734 VTLVKSIA 741
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 7/276 (2%)
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA QLF + + + SYN L+ A C G+++++ L EM PD T I+V
Sbjct: 240 EAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMV 292
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY L +A+ L+ E+ G+ ++ Y +I LC + + A ++E + G V
Sbjct: 293 HGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVV 352
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
++ +M C+ +A A DEM R + TY ALI C G EA +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ EM + G+ D+ VLI+GYC + +A + +K + +Y A+ + +
Sbjct: 413 LQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCK 472
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
GD+ EL G N T +I+ L K
Sbjct: 473 QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKA 508
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 180/345 (52%), Gaps = 4/345 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +++ F+ + F P+++S +++GL K +D+ ++++M I P+ T+
Sbjct: 185 GKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTY 243
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L K V + E+ +G P +VTYNT+I CK GR+ +A LY M R
Sbjct: 244 GALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVR 303
Query: 304 RNVL-PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
L PD+ TY+ L+NGL + +A++L+ M+ G SPD+V+YNTL+ CK G
Sbjct: 304 EPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCED 363
Query: 363 ESKSLLYEM-MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ + +M +GN P+ T +++ + K RL A+ L E++ + + +
Sbjct: 364 KAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTV 423
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+++R A L E IG+ P ++N ++ CK + DA L D M+D
Sbjct: 424 IQKLCKESRIDEAHELFESIGKTCK-PDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGC 482
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P+L+TY AL+ FC GR +A+ + EM+E G P+ + ++
Sbjct: 483 APTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELV 527
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 5/411 (1%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
YVK + ++ F+ + F+P VS N L+NG K + + ++ EM GI
Sbjct: 112 YVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV- 170
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ NI+ C G + + + F P+L++Y +I CK +++ A L++
Sbjct: 171 LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFK 229
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + PD+VTY L++GL K+ +V+EA+ LF +G P +V+YNT+I CK G
Sbjct: 230 QMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCG 289
Query: 360 KMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ + +L +M+ + PD FT ++ G R A L E+ G S Y
Sbjct: 290 RIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTY 349
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ L+ LC+ A + ++G P++ Y L++ CK D + DA+ L EM
Sbjct: 350 NTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEME 409
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R++ P T+ +I C R EA L E + PDS + ++ GYC ++
Sbjct: 410 GRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRID 468
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
A+ L +Y A+ F G S + + + +GF P
Sbjct: 469 DAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 39/408 (9%)
Query: 222 DQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ W+V++ G+ N T N L V+ K V+ + F + + F+PD V+YNT
Sbjct: 83 NTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNT 142
Query: 281 LISSYCKKGRLNDAFYLY--------RIMYRRNVL------------------------- 307
L++ + K G + A L+ ++ N++
Sbjct: 143 LMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFS 202
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+L++YT +++GLCK KV +A LF +MV + + PD+V+Y LI K+ +++E+ L
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVAL 425
E G +P T ++ G K GR+ +AL L ++ R + D++ Y LI L
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVR-EPHLKPDMFTYSALINGL 321
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI-KPS 484
NR A L E + G P + YN L++ LCK A+ + +M N+ P+
Sbjct: 322 NLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPN 381
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ TY LI FC + R G+AV L EM +LPD+ +I C E +++A L
Sbjct: 382 VITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFE 441
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
K + D+ +N + + + + +L R L G AP T
Sbjct: 442 SIGKTCKP-DSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLAT 488
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 4/158 (2%)
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ P YN LM K V AL L EM D I L ++ ++ C G+ A
Sbjct: 133 FEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAW 191
Query: 506 SLMDEMLESGMLPDSQIC-RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ +M SG+ + I ++I+G C + V+KA L K D +Y A+ +
Sbjct: 192 EVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDG 249
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + +L + G P +T MI L K
Sbjct: 250 LGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCK 287
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 213/473 (45%), Gaps = 9/473 (1%)
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFK 191
++++L + K A K+ E+V D VD + I C K G + + +K
Sbjct: 143 LLNVLVKHGKVEIACKVYDEMV----DRNGEVDNYTVCIMVKGLC-----KEGKVEDGWK 193
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
K G P+IV N L++G K ++ +++E+ G P T+ + + FC
Sbjct: 194 LIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFC 253
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV 311
K G + V+ L ++ E G D + YN +I + K G +A M + PD+
Sbjct: 254 KKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMA 313
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
TY L+ G C G+V +A QL + + RGL P+ VSY LI YCK+G+ + LL +M
Sbjct: 314 TYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKM 373
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G PD T ++ G G + AL + ++ GV +IY+ L+ LC+ R
Sbjct: 374 SERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRL 433
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
AA LL + P I L++ + +A L + +++ I P + Y A+
Sbjct: 434 PAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAM 493
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I +C G +A+ M++ PD +I+GY D++ A + G K
Sbjct: 494 IKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGAC 553
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ +Y + N F GD+++ + K+ L L PN +T +I KG+
Sbjct: 554 KPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGV 606
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 207/489 (42%), Gaps = 21/489 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y I++ KF K+L E+ E D S+ ++ ++I A K
Sbjct: 240 PTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDV--SIHIYNNIID-------AQFKH 290
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ T + G P + + N L+ G + + Q+ E+ + G+ PN ++
Sbjct: 291 GCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSY 350
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L H +CK G+ + L K+ E G PDLVTY LI G ++ A + M
Sbjct: 351 TPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVE 410
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ VLPD Y LM+GLCK+G++ A L M+ + ++PD TL+ + + G +E
Sbjct: 411 KGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEE 470
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K L + GI P +++GY K G + AL + + S Y +I
Sbjct: 471 AKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIID 530
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ N A + + + P++ Y L+ C + A +M+ +KP
Sbjct: 531 GYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKP 590
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV------- 536
++ TY LI CFC +A S ++ML LP+ L+NG D
Sbjct: 591 NVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRS 650
Query: 537 NKAEALLGFFAKKFQIYD-----TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+ E L + I D SYN++ + + + L+ + + GF P+ +
Sbjct: 651 EQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPV 710
Query: 592 TCKYMIHSL 600
+ ++H L
Sbjct: 711 SLVALLHGL 719
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 193/447 (43%), Gaps = 43/447 (9%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGL 215
KD + + F +IS DC GL+ + + +R + + P + SCN LLN L
Sbjct: 95 KDLMPTREAFSLVISVFADC-------GLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVL 147
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+K ++ +VY+EM +NG+VD
Sbjct: 148 VKHGKVEIACKVYDEM------------------VDRNGEVDNY---------------- 173
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T ++ CK+G++ D + L + R +P++V Y TL++G CK+G A+ LF
Sbjct: 174 -TVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKE 232
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ +G P + +Y +I +CK+GK + LL EM G+ I+ K G
Sbjct: 233 LKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGC 292
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A + V + + G Y+ LI C A LLE+ + G +P+ Y
Sbjct: 293 RIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTP 352
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ + CK AL L +M +R KP L TY ALI G A+++ ++M+E G
Sbjct: 353 LIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+LPD+ I VL++G C + + A+ LL + D + + F GD +
Sbjct: 413 VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAK 472
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L + + G P + MI K
Sbjct: 473 KLFELTIEKGIDPGVVGYNAMIKGYCK 499
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 146/333 (43%), Gaps = 12/333 (3%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + + K ++ G P N L++GL K + + EM + P+
Sbjct: 393 IVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDA 452
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
L F ++GD ++ E E+G DP +V YN +I YCK G + DA ++
Sbjct: 453 FITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKR 512
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD TY+T+++G K + A ++F MV P++V+Y LI +C G
Sbjct: 513 MIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGD 572
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ +M+ + P+ T I++ + K L A + ++ + Y+Y
Sbjct: 573 INRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNY 632
Query: 421 LIVALC---------QDNRPFAATSLLERIG---QDGYVPSLEIYNELMESLCKCDSVAD 468
L+ L Q + + +LE G DG+ YN ++ LC+ V
Sbjct: 633 LMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKH 692
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
AL L+D+M+ + P + AL+ C GRS
Sbjct: 693 ALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRS 725
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G+++++ F++ + P + + +++G +K+N + +++ M + P
Sbjct: 496 GYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKP 555
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ +L + FC +GD+++ +++ P++VTY LI +CK L A +
Sbjct: 556 NVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFF 615
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL------------FHRMVHRGLSPDIV 346
M LP+ VTY LMNGL ++Q F M+ G
Sbjct: 616 EQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAA 675
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
SYN+++ C+ ++ + L +MM G PD + ++ G EGR
Sbjct: 676 SYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGR 724
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 205/428 (47%), Gaps = 4/428 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGIC 237
Y + I ++ + G P VS ++ L K I+Q + E+M + +
Sbjct: 310 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLI 369
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T+N L H+ K+G D FL++ E++GF D V Y+ ++ S+C+KGR+++A L
Sbjct: 370 PDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 429
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
MY R+ PD+VTYT +++G C+ G++ EA ++ +M G P+ VSY L+ C
Sbjct: 430 VIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCH 489
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
GK E++ ++ + P+ T +++ G+ +EG+L A +L E+ G +
Sbjct: 490 SGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVE 549
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ LI +LCQ+ + A LE G ++ + ++ C+ + AL + ++M
Sbjct: 550 INLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMY 609
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
N P TY AL GR EA L+ +ML G+ P R +I+ YC V+
Sbjct: 610 LSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVD 669
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LL K+ YN V + G+L + +L + LR + TC ++
Sbjct: 670 DMLNLLDRMVKRKPFRTI--YNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLM 727
Query: 598 HS-LWKGM 604
S L KG+
Sbjct: 728 ESCLKKGV 735
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 221/502 (44%), Gaps = 10/502 (1%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
+LR Q+D AL FF W Y ++ +L+ A ++L +
Sbjct: 168 AVLRSQADERVALNFFYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTR--- 224
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
+++ + C +Y + G +R + + G +P++ CN + L+K
Sbjct: 225 ---RGIELSPEAFGCVM---VSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVK 278
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+++ + E M GI P+ T+N L +C ++ + + +G PD V+
Sbjct: 279 GCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVS 338
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
Y T++ CK+ ++ L M + N++PD VTY TL++ L K G +A
Sbjct: 339 YYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEA 398
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+G D V Y+ ++ ++C++G+M E+KSL+ +M PD T IV G+ + GR+
Sbjct: 399 EDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRI 458
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A ++ ++ + G + Y L+ LC + A ++ + + P+ Y +
Sbjct: 459 DEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVV 518
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
M + +++A L EMV++ P+ LI C + EA ++E L G
Sbjct: 519 MHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGC 578
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+ +I+G+C D+ A ++L + D +Y A+F+ + G L + E
Sbjct: 579 AINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAE 638
Query: 577 LQKRFLRLGFAPNNLTCKYMIH 598
L + L G P +T + +IH
Sbjct: 639 LIVKMLSKGLDPTPVTFRSVIH 660
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 11/288 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + Y +++H K S A + E+VE P V++ + S ++
Sbjct: 510 PNAITYGVVMHGFRREGKLSEACDLTREMVE-KGFFPTPVEINLLIQSLCQNQK------ 562
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ E+ K + L+ G ++V+ +++G ++ ++ V E+M P+ T+
Sbjct: 563 --VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTY 620
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L K G +D+ + K+ +G DP VT+ ++I YC+ GR++D L M +
Sbjct: 621 TALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVK 680
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R P Y ++ LC G + EA +L +++ D + + L+ + K+G
Sbjct: 681 RK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALS 738
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
+ + +M + PD C+ + + +G L+ A L++ G+
Sbjct: 739 AYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 206/434 (47%), Gaps = 8/434 (1%)
Query: 174 EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR 233
E CN ++ L E+ + F++ + + S N LL L I Q+++EM
Sbjct: 227 ESCNAVLCRLPL-DEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEMAS 281
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
P+ T+ I+ H +C +++ L ++ G + + V Y ++I+ C +G+++D
Sbjct: 282 P---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSD 338
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
A + M V+ D +TT+M+G C++G + A F M RGL+ D V+Y LI
Sbjct: 339 AVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALIN 398
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C+ G+++E++ +L EM G+ D T +++ GY K G++ A + ++ + V+
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ Y L LC+ AA LL + G ++ YN L+ LCK ++ A+
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+M + +KP + TY +I C A SL+ EML+ G+ P VL+NG+CM
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
V + LL + +K +T +YN++ + + ++ E+ K L PN T
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTY 638
Query: 594 KYMIHSLWKGMERK 607
+I K K
Sbjct: 639 NILIKGHCKARNMK 652
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 206/430 (47%), Gaps = 9/430 (2%)
Query: 162 SVDVFQDLISCTEDCNW-----AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+V +FQ+L C++ A G I+++ + F ++ P +V+ +++G
Sbjct: 241 AVQLFQELPE-KNTCSYNILLKALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYC 296
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
L+ ++ ++ EM G+ N + + + C G V +E + G D
Sbjct: 297 TLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAA 356
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+ T++S +C+KG L A + M +R + D VTYT L+NGLC+ G+++EA ++ M
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM 416
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+GL D V+Y LI YCK GKM E+ + +M+ + P+ T + G K+G +
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+A L+ E+ G+ ++ Y+ LI LC+ A + + + G P + Y +
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ +LC+ + A L EM+D+ IKP++ TY L+ FC GR L++ MLE +
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P++ L+ YC+EK++ + + + + +YN + + ++ + +
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656
Query: 577 LQKRFLRLGF 586
+ GF
Sbjct: 657 FHSEMIEKGF 666
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 37/364 (10%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
++EM + G+ + T+ L + C+ G++ + L+++E++G D D VTY LI YCK
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCK 437
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ +AF ++ M ++ V P++VTYT L +GLCK+G V A++L H M +GL +I +
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+LI CK G ++++ + +M G+ PD +T
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYT------------------------- 532
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
Y +I ALCQ A SLL+ + G P++ YN LM C V
Sbjct: 533 ----------YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 582
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
L + M+++NI P+ +TY +L+ +C + ML ++P+ +LI
Sbjct: 583 GGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL--QKRFLRLG 585
G+C +++ +A +K SYNA+ + + ++ L + R RL
Sbjct: 643 KGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLT 702
Query: 586 FAPN 589
P+
Sbjct: 703 AEPD 706
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 155/330 (46%), Gaps = 35/330 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++E+ + ++ D G V+ L++G K+ + + + V+ +M + + PN
Sbjct: 402 RAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVV 461
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L+ CK GDV N L ++ +G + ++ TYN+LI+ CK G L A M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD+ TYTT++ LC+ ++ AH L M+ +G+ P IV+YN L+ +C G++
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ K LL M+ I+P+T T Y+ L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTT-----------------------------------YNSL 606
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C + + T + + + VP+ YN L++ CK ++ +AL EM+++
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGF 666
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ + S+Y ALI + EA L ++M
Sbjct: 667 RLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 153/308 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + E+F K + P++V+ L +GL K + ++ EM G+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L + CK G++++ + ++E G PD+ TY T+I + C+ L+ A L
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + + P +VTY LMNG C G+V +L M+ + + P+ +YN+L+ YC E
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
M+ + + M+ + P+ T I+++G+ K + AL E+ G ++ Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI L + + A L E++ ++ ++YN ++ D++ L L DE+V+
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Query: 479 RNIKPSLS 486
+ S++
Sbjct: 734 VTLVKSIA 741
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 144/573 (25%), Positives = 249/573 (43%), Gaps = 68/573 (11%)
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
H+ L+ Q+ + AL F W N + + S Y ++ L ++F ++L E+
Sbjct: 39 HQHIAHLILDQNSATKALQTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEM 98
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWA--YVKV-GLIRE-----SFKTFRKTLDV----- 199
+ P ++F +I +KV LI + S K F LDV
Sbjct: 99 PHAIGSPPDE-EIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVD 157
Query: 200 ---------------GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
G Q + L+ GL N I +++ + M G+ PN +N
Sbjct: 158 IDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYN 217
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L H CKNG V + +++IEE P+ VT+N LI++YCK+ L A L +
Sbjct: 218 TLLHALCKNGKVGRARSLMDEIEE----PNDVTFNVLIAAYCKEENLVQALVLLEKSFSL 273
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+PD+VT T ++ LC G+V EA ++ R+ ++G D+V+YNTL+ +C+ GK++ +
Sbjct: 274 GFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVA 333
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
L EM G P+ T I++ G+ G AL++ +++ G+S + D YD LI
Sbjct: 334 HRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKG 393
Query: 425 LCQDNRPFAATSLLE-----RIGQDGYVPSL----------EIYNELMESL--------- 460
L R +LE + G G + +++E +E L
Sbjct: 394 LFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPR 453
Query: 461 -----------CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
C+ +V +A ++ D+M++ P++ Y L+ FC G EA LM+
Sbjct: 454 AVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMN 513
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM+ G + LI+G+C + A LL + + D +Y+ + + G
Sbjct: 514 EMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKG 573
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K + + + + G P++ T ++ L K
Sbjct: 574 NFQKALSIFNQMIEKGITPDSSTWNSLLIRLSK 606
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 146/328 (44%), Gaps = 5/328 (1%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIM-YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
TY LI C R + + L M + PD + T++ GL + + ++
Sbjct: 74 TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ G +P + +N+++ K + +MMG+G+ D +T I+++G R
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNR 193
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ L+ ++ GV + +Y+ L+ ALC++ + A SL++ I + P+ +N
Sbjct: 194 IGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----PNDVTFNV 249
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ + CK +++ AL+L ++ P + T ++ C GR EAV +++ + G
Sbjct: 250 LIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKG 309
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
L D L+ G+C + A L +K + + E+YN + + F + G +
Sbjct: 310 GLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMAL 369
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ G + N T +I L+ G
Sbjct: 370 DMFNDMKTDGISWNFDTYDTLIKGLFFG 397
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 35/285 (12%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ ++G I+ + + ++ G P++ + N L++G D ++ +M GI
Sbjct: 323 GFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISW 382
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEE------------------------------ 268
N T++ L G +++ LE +EE
Sbjct: 383 NFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALE 442
Query: 269 -----EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
E P V + I +C+KG + +A ++ M P+++ Y L++G C+E
Sbjct: 443 FLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQE 502
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G +REA +L + MV G +N LI +C +GK + + LL +M+G G PD T
Sbjct: 503 GNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTY 562
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
++ ++G AL++ ++ G++ ++ L++ L ++
Sbjct: 563 SPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 87/167 (52%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P V + + G + + V+++M G PN ++ L H FC+ G++ +
Sbjct: 452 PRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFEL 511
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ ++ G+ +N LI +C +G+ A L M R +PD TY+ L++ LC+
Sbjct: 512 MNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCR 571
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+G ++A +F++M+ +G++PD ++N+L+ KE E+K++ +
Sbjct: 572 KGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEIIWLENKNVFH 618
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 138 WNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL 197
W+ F MKM K P +VD ++ E G ++ + F + +
Sbjct: 437 WDEALEFLMKM-------EKLFPRAVDRSLRILGFCEK--------GAVKNAKMVFDQMI 481
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
+ G P+I+ + L++G + + + +++ EM G FN L H FC G +
Sbjct: 482 NEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDE 541
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
L+ + G PD TY+ LI + C+KG A ++ M + + PD T+ +L+
Sbjct: 542 SALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLL 601
Query: 318 NGLCKEGKVREAHQLFH 334
L KE E +FH
Sbjct: 602 IRLSKEIIWLENKNVFH 618
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/530 (23%), Positives = 241/530 (45%), Gaps = 46/530 (8%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A FF+ +K + P Y ++ +L + A+++ EL +L + P V +
Sbjct: 292 AWKFFHEMKAQ-GLVPDDVTYTTLIGVLCKARRLDEAVELFEEL-DLNRSVP-CVYAYNT 348
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I Y G E++ + G PS+++ N +L L + +++ +++
Sbjct: 349 MI-------MGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIH 401
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK- 287
+EM R PN T+NIL + CK G+++ + ++E G P+++T N +I CK
Sbjct: 402 DEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKA 460
Query: 288 ----------------------------------KGRLNDAFYLYRIMYRRNVLPDLVTY 313
+GR++DA+ LY M + +P++V Y
Sbjct: 461 QKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVY 520
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
T+L+ K G+ + H+++ MVHRG SPD++ N+ + K G++++ ++L E+
Sbjct: 521 TSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKA 580
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G+ PD + I++ G K G L E++ G+ + Y+ +I C+ +
Sbjct: 581 QGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDK 640
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A LLE + G P++ Y +++ L K D + +A +L +E + ++ Y +LI
Sbjct: 641 AYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLID 700
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
F +GR EA +++E+++ G+ P+S L++ +++++A+
Sbjct: 701 GFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP 760
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ +Y+ + N +K + + G PNN+T MI L K
Sbjct: 761 NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKA 810
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 206/458 (44%), Gaps = 37/458 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + K + G P+I++ N +++ L K +D+ ++ + P++
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L + G VD EK+ + P++V Y +LI ++ K GR D +Y+ M
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543
Query: 302 YRRN-----------------------------------VLPDLVTYTTLMNGLCKEGKV 326
R ++PD+ +Y+ L++GL K G
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
RE ++LF+ M +GL D+++YNT+I +CK GK+ ++ LL EM G+ P T +
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
V G K RL A L E + GV ++ IY LI + R A +LE + Q G
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P+ +N L+++L K + + +A + M + P+ TY +I C I + +A
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFV 783
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF-NMF 565
EM + G+ P++ +I G +V +A L F + D+ YNA+ +
Sbjct: 784 FWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + + + ++ L+ G N+ TC ++ +L K
Sbjct: 844 SANKAMDAYIVFEETRLK-GCRVNSKTCVVLLDALHKA 880
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/568 (23%), Positives = 233/568 (41%), Gaps = 88/568 (15%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +F WV+ + Y + ++A + ++L E+ V S V +
Sbjct: 116 AFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMS--VAGFGLSNHVSVE 173
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ ++VK ++E+F F+P+ + L+ L N D ++
Sbjct: 174 LVA-------SFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLF 226
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M IG N H F L VF + G +D L++++ F DLV YN I + K
Sbjct: 227 HQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKV 286
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G+++ A+ + M + ++PD VTYTTL+ LCK ++ EA +LF + P + +Y
Sbjct: 287 GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NT+I Y GK E+ SLL G P I+ G++G++ AL + E+ R
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-R 405
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS--- 465
+ + Y+ LI LC+ AA + + + + G P++ N +++ LCK
Sbjct: 406 QDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465
Query: 466 --------------------------------VADALLLKDEMVDRNIKPSLSTYRALIC 493
V DA L ++M+D + P++ Y +LI
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY--CMEK--DVNKAEALL------ 543
F GR + + EM+ G PD +L+N Y C+ K +V K AL
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSPD----LMLLNSYMDCVFKAGEVEKGRALFEEIKAQ 581
Query: 544 -------------------GFFAKKFQIY----------DTESYNAVFNMFAEDGDLSKL 574
GF + ++++ D +YN V + F + G + K
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L + G P +T ++ L K
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAK 669
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 190/406 (46%), Gaps = 9/406 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S +C ++ L + A + ++++ D +V V+ LI + K
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD--SDQIPNVVVYTSLIQ-------NFFKC 530
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + K +++ + G P ++ N ++ + K +++ ++EE+ G+ P+ ++
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+IL H K G + +++E+G D++ YNT+I +CK G+++ A+ L M
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P +VTY ++++GL K ++ EA+ LF G+ ++V Y++LI + K G++ E
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L E+M G+ P+++T ++ K + A ++ S + Y +I
Sbjct: 711 AYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMIN 770
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC + A + + + G P+ Y ++ L K +V +A L D P
Sbjct: 771 GLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVP 830
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ Y A+I ++ +A + +E G +S+ C VL++
Sbjct: 831 DSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDA 876
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 1/395 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L+ +K + + + + V E M + P + L D + +++E G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
++ ++ + TL+ + ++GR++ A L M + DLV Y ++ K GKV A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ FH M +GL PD V+Y TLI CK ++ E+ L E+ N P + ++ GY
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
G G+ A +L+ +R G S Y+ ++ L + + A + + + QD P+L
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNL 412
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L++ LCK + AL ++D M + + P++ T +I C + EA S+
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLG 472
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+ PDS+ LI+G V+ A +L QI + Y ++ F + G
Sbjct: 473 LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGR 532
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++ K + G +P+ + + ++K E
Sbjct: 533 KEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGE 567
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 209/423 (49%), Gaps = 15/423 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + + L P +V+ L++GL K +++EM GI PN ++I+
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C+ + K+ G + DL+TYN L++ +CK G L+DAF L +++ + +
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++ Y L+NGL + + EAH + +M+ + PD++ Y +I +EG++ E+ +LL
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ PDT +++G+ G L A +L +E+ + + Y LI +C++
Sbjct: 362 GEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL--- 485
A + + + + G +PS+ +N L+ LCK + + +A LL +M + KPSL
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM-EIVRKPSLFLR 480
Query: 486 -----------STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
++ + ++ C G +A L+ ++++SG+LPD + +LING+C
Sbjct: 481 LSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFG 540
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++N A L K + D+ +Y + + G +E+ ++ ++ G P + T K
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600
Query: 595 YMI 597
++
Sbjct: 601 TIM 603
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 222/481 (46%), Gaps = 28/481 (5%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D + KP + LI+H L F A+ + ++++ C + DV I C
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK----CNLNPDVVTYGILIHGLC-- 209
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K +++ F + D G P+ + + +L+GL + I +++ +M G
Sbjct: 210 ---KTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNR 266
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N+L + FCK+G +D L+ + ++G ++ Y LI+ + R +A Y
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R N+ PD++ YT ++ GL +EG+V EA L M RGL PD + YN LI +C
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E++SL E+ + +P+ T I++ G K G + A ++ E+++ G S +
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446
Query: 419 DYLIVALCQDNRPFAA------------TSLLERIGQDG----YVPSLEIYNELMESLCK 462
+ LI LC+ NR A SL R+ Q + SL++ +ME LC+
Sbjct: 447 NSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV---MMERLCE 503
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ A L ++VD + P + TY LI FC G A L EM G +PDS
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVT 563
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI+G A + KK + ++ +Y + + ++S + + ++L
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYL 623
Query: 583 R 583
R
Sbjct: 624 R 624
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 193/407 (47%), Gaps = 12/407 (2%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ ++ L+K N + W+V +E+ I ++ F++L + + G +K + +
Sbjct: 97 DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
PDL +N ++ +K A +Y M + N+ PD+VTY L++GLCK K ++
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A LF M RG+ P+ + Y+ ++ C+ K+ +++ L +M +G D T +++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ K G L A L+ L + G + Y LI L + R A +++ ++ P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ +Y ++ L + V +AL L EM +R ++P Y ALI FC +G EA SL
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLR 396
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
E+ + P++ +LI G C +NKA+ + K + ++N++ N +
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456
Query: 569 GDLSKL------MELQKR---FLRLGFAPNNLTCKYMIHSLWKGMER 606
L + ME+ ++ FLRL + + + I SL MER
Sbjct: 457 NRLEEARLLFYQMEIVRKPSLFLRLSQGTDKV---FDIASLQVMMER 500
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 12/445 (2%)
Query: 173 TEDCNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW---- 225
T +CN A + G + E+ RK G + IVS N +L GL C+ + W
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL----CMAKRWGDVE 236
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++ +EM R+ PN TFN L C+NG ++V+ L ++ E G PD+ Y T+I
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK+G L A + M + P++V Y T++ GLC + +EA +L M + D
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++N L+ +C+ G + LL +M+ +G PD T ++ G+ KEG + A+ L+
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + Y ++ LC R A L+ ++ Q G P+ +N L+ LCK
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V A+ L +M+ P L +Y +I G++ EA+ L++ M+ G+ P++ I
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+ E VNK + D YNAV + + + + ++ + G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 586 FAPNNLTCKYMIHSLW-KGMERKFQ 609
PN T +I L +G+ ++ Q
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQ 621
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 168/366 (45%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V E M G +T N++ + C+ G VD+ G L K+ G + D+V+YN ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C R D L M R + P++VT+ TL+ LC+ G H++ +M G +PDI
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
Y T+I CKEG ++ + +L M G+ P+ +++G R A L+ E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + + ++ L+ CQ+ LLE++ G +P + Y ++ CK
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +A++L M KP+ +Y ++ C GR +A LM +M++ G P+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LIN C + V +A LL D SY+ V + + G + +EL + G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 586 FAPNNL 591
+PN +
Sbjct: 527 ISPNTI 532
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 52/400 (13%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
++ P + ++ L N F ++L ++ E C + ++ +I
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE--HGCTPDIRMYATIID-------G 295
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI--- 236
K G + + + + G +P++V N +L GL C + W+ EE+
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL----CSAERWKEAEELLSEMFQKD 351
Query: 237 CP-NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
CP + TFNIL FC+NG VD+V LE++ G PD++TY T+I+ +CK+G +++A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 296 YL---------------YRI--------------------MYRRNVLPDLVTYTTLMNGL 320
L Y I M ++ P+ VT+ TL+N L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+G V +A +L +M+ G SPD++SY+T+I K GK +E+ LL M+ GI P+T
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
I +EGR+ + + ++ + +Y+ +I +LC+ A
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+ +G +P+ Y L++ L +A L E+ R
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +TF + C G + L+++ +G P Y+ ++ + C+ G +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ + M+ + D ++N +C++G V EA L ++ G DIVSYN ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN +++ LC + +A L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM ++ T+ L+ FC G + L+++ML G +PD +ING+C E
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL + +T SY V G EL + ++ G PN +T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 465 NTLINFLCK 473
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 12/445 (2%)
Query: 173 TEDCNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW---- 225
T +CN A + G + E+ RK G + IVS N +L GL C+ + W
Sbjct: 181 TGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL----CMAKRWGDVE 236
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++ +EM R+ PN TFN L C+NG ++V+ L ++ E G PD+ Y T+I
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CK+G L A + M + P++V Y T++ GLC + +EA +L M + D
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
V++N L+ +C+ G + LL +M+ +G PD T ++ G+ KEG + A+ L+
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ G + Y ++ LC R A L+ ++ Q G P+ +N L+ LCK
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
V A+ L +M+ P L +Y +I G++ EA+ L++ M+ G+ P++ I
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
+ E VNK + D YNAV + + + + ++ + G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 586 FAPNNLTCKYMIHSLW-KGMERKFQ 609
PN T +I L +G+ ++ Q
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQ 621
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 168/366 (45%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V E M G +T N++ + C+ G VD+ G L K+ G + D+V+YN ++
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C R D L M R + P++VT+ TL+ LC+ G H++ +M G +PDI
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
Y T+I CKEG ++ + +L M G+ P+ +++G R A L+ E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + + ++ L+ CQ+ LLE++ G +P + Y ++ CK
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ +A++L M KP+ +Y ++ C GR +A LM +M++ G P+
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LIN C + V +A LL D SY+ V + + G + +EL + G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Query: 586 FAPNNL 591
+PN +
Sbjct: 527 ISPNTI 532
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 52/400 (13%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
++ P + ++ L N F ++L ++ E C + ++ +I
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSE--HGCTPDIRMYATIID-------G 295
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI--- 236
K G + + + + G +P++V N +L GL C + W+ EE+
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGL----CSAERWKEAEELLSEMFQKD 351
Query: 237 CP-NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
CP + TFNIL FC+NG VD+V LE++ G PD++TY T+I+ +CK+G +++A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 296 YL---------------YRI--------------------MYRRNVLPDLVTYTTLMNGL 320
L Y I M ++ P+ VT+ TL+N L
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFL 471
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+G V +A +L +M+ G SPD++SY+T+I K GK +E+ LL M+ GI P+T
Sbjct: 472 CKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNT 531
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
I +EGR+ + + ++ + +Y+ +I +LC+ A
Sbjct: 532 IIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAY 591
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+ +G +P+ Y L++ L +A L E+ R
Sbjct: 592 MVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+ + PN +TF + C G + L+++ +G P Y+ ++ + C+ G +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+ + M+ + D ++N +C++G V EA L ++ G DIVSYN ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
C + + + L+ EM+ P+ T ++ + G ++ ++ G +
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+Y +I +C++ A +L R+ G P++ YN +++ LC + +A L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM ++ T+ L+ FC G + L+++ML G +PD +ING+C E
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+++A LL + +T SY V G EL + ++ G PN +T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 465 NTLINFLCK 473
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 244/533 (45%), Gaps = 58/533 (10%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
FF+ +K+ + P Y ++ +L N+ A+++ E +E + P + + +I
Sbjct: 287 FFHEMKSH-GLMPDDVTYTSMIGVLCKANRLDEAVELF-EQLEQNRKVPCAY-AYNTMI- 342
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
Y G E++ + G PS+++ N +L L K +++ +++EEM
Sbjct: 343 ------MGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396
Query: 232 GRIGICPNTHTFNILTHVFCKNG----------DVDKVNGF---------------LEKI 266
R + PN T+NIL + C+ G D+++ F +K+
Sbjct: 397 KRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 455
Query: 267 EE-----EGFD-----PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
EE EG D P+ VT+++LI K GR++DA+ LY M +P + YT+L
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ K G+ + H+++ MVH G SPD+ NT + K G+ ++ ++L E+ +G
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD + I++ G K G L ++ G + Y+ +I C+ + A
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LLE + G+ P++ Y +++ L K D + +A +L +E IK ++ Y +LI F
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK------F 550
+GR EA +M+E+++ G+ P+ L++ +++N EAL+ F + K
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN--EALICFQSMKDLKCPPN 753
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
QI +Y+ + N +K + +LG PN +T MI L K
Sbjct: 754 QI----TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 802
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 143/550 (26%), Positives = 248/550 (45%), Gaps = 24/550 (4%)
Query: 60 KIVDLICSSLKKGDSHLTLLQNDLKPL----LPHLGAHEISRVLLRCQSDSVSALTFFNW 115
K VD +C L+ G TL +N L L LP L + VL R + D+ +A+ +F W
Sbjct: 61 KGVDDVCCILESGPWGPTL-ENSLSALGEKPLPEL----VIGVLKRLK-DANTAVNYFQW 114
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
+ E Y ++ ++A N +F ++L E+ L P S + + +C
Sbjct: 115 AEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEM-SLSGFGPSSNISIELVANC--- 170
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
VK +RE+F + F+P+ + L+ L ++ D ++ +M +G
Sbjct: 171 -----VKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELG 225
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
N H F L VF + G VD L++++ D D+V YN I + K G+++ ++
Sbjct: 226 YEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSW 285
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M ++PD VTYT+++ LCK ++ EA +LF ++ P +YNT+I Y
Sbjct: 286 KFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGY 345
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
GK E+ LL G P I+ GK+ R+ AL + E++R V +
Sbjct: 346 GSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NV 404
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI LC++ + AA + + + + G P++ N +++ LCK + +A + +
Sbjct: 405 PTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEG 464
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY--CME 533
M D+ P+ T+ +LI GR +A SL ++ML+ G +P + + LI + C
Sbjct: 465 MDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 524
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
K+ + D N + + G+ K L + GF P+ +
Sbjct: 525 KE--DGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 582
Query: 594 KYMIHSLWKG 603
+IH L K
Sbjct: 583 SILIHGLVKA 592
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 11/454 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F +K D P Y +++ +L K + A++ ++D +F +
Sbjct: 389 ALRIFEEMKRD--AVPNVPTYNILIDMLCREGKLNAALE--------IRDDMERAGLFPN 438
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+++ + K + E+ F D P+ V+ + L++GL K +D + +Y
Sbjct: 439 VLTVNIMID-RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLY 497
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E+M G P + L F K G + + +++ G PDL NT + K
Sbjct: 498 EKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKA 557
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G L+R + +PD +Y+ L++GL K G E ++LF+ M +G D +Y
Sbjct: 558 GETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAY 617
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I +CK GK+ ++ LL EM G P T ++ G K RL A L E +
Sbjct: 618 NAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 677
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G+ ++ +Y LI + R A ++E + Q G P++ +N L+++L K + + +
Sbjct: 678 NGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 737
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL+ M D P+ TY LI C + + +A EM + G+ P++ +I+
Sbjct: 738 ALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS 797
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
G ++ +A L F I D+ SYNA+
Sbjct: 798 GLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 153/372 (41%), Gaps = 44/372 (11%)
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
CP +N L V +N + D + LE++ GF P L+++ K +L +AF
Sbjct: 124 CP--EAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFD 181
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ---LFHRMVHRGLSPDIVSYNTLIF 353
+ + M + P YT L+ L +VRE LFH+M G ++ + TLI
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGAL---SEVREPDPMLILFHQMQELGYEVNVHLFTTLIR 238
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
+ +EG++ + SLL EM N + D + + +GK G++ + E++ G+
Sbjct: 239 VFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMP 298
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
Y +I LC+ NR A L E++ Q+ VP YN ++ +A L
Sbjct: 299 DDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL 358
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
+ + PS+ Y ++ C R EA+ + +EM
Sbjct: 359 ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM---------------------- 396
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
K+ + + +YN + +M +G L+ +E++ R G PN LT
Sbjct: 397 --------------KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTV 442
Query: 594 KYMIHSLWKGME 605
MI L K +
Sbjct: 443 NIMIDRLCKAQK 454
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 174/343 (50%), Gaps = 2/343 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I S + +R L ++S + +NGL K I + +++ EM G P++ T+NI
Sbjct: 72 IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNI 131
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L + CK+ ++ +++++ GF P +VTY TLI +C GR++ A + M R
Sbjct: 132 LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRG 191
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS--PDIVSYNTLIFAYCKEGKMQE 363
+ P+ VTYT L+ GLC G+V A + M RG P++V+Y LI C++G +
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEM 251
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
L EM+ +G +P+ T ++ G ++G L A L+ E+ G + IY+ LI
Sbjct: 252 GMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLID 311
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ A + + + G P + Y L++ LC + +AL L EM + I P
Sbjct: 312 GLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVP 371
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ TY LI F R+ A+ L++EM +G++P I ++L
Sbjct: 372 NSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 147/326 (45%), Gaps = 3/326 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D+IS + N K G I E+ + FR+ + G P + N L+NGL K ++ +
Sbjct: 90 DVISYSRKIN-GLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSL 148
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+EM G P T+ L H FC G VD L+++E G P+ VTY LI C
Sbjct: 149 MDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCD 208
Query: 288 KGRLNDAFYLYRIMYRRN--VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
G + A + + M R P++VTYT L++GLC++G + M+ G P+
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
+Y LI C++G E+ LL EM+ G D ++ G K G L A + +
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ GV+ Y LI LC A L++ + G VP+ Y L+ + D
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388
Query: 466 VADALLLKDEMVDRNIKPSLSTYRAL 491
AL L +EM + P+ Y+ L
Sbjct: 389 TDHALQLVNEMKSNGLMPAGDIYKIL 414
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 2/332 (0%)
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
D D+++Y+ I+ CKKG++ +A ++R M + PD TY L+NGLCK+ ++
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L M RG SP +V+Y TLI +C G++ + +L EM GI P+T T ++QG
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPS 449
G + A+ ++ E++ G ++ Y LI LCQ L+ + G P+
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
Y L+ LC+ S +A +L +EMV + + Y +LI C +G A +
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M+E G+ PD LI G C +++A L+ K + ++ +Y + N F +
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
++L G P K + SL+
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKILFKSLY 419
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++++ L + + + ++ E+ + +V + LI +
Sbjct: 124 PDSFTYNILINGLCKDAQLEMGVSLMDEMQ--ARGFSPTVVTYTTLI-------HGFCTA 174
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTH 241
G + + + G P+ V+ L+ GL +++ V +EM G CPN
Sbjct: 175 GRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVV 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L H C+ G + FL+++ G P+ TY LI C+KG +A L M
Sbjct: 235 TYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
D+V Y +L++GLCK G++ A ++ MV +G++PD+ +Y +LI C G +
Sbjct: 295 VAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLL 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L+ EM GI P++ T ++ G+ + R AL LV E++ G+ + DIY L
Sbjct: 355 DEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414
Query: 422 IVAL 425
+L
Sbjct: 415 FKSL 418
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y ++ L + A+ +L E+ +C +V + LI
Sbjct: 192 ITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLI-------HGLC 244
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ GL + + + G P+ + L++GL + + + EM IG +
Sbjct: 245 QKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVV 304
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L CK G++D + E+G PD+ TY +LI C G L++A L + M
Sbjct: 305 IYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ ++P+ VTYTTL+NG + + A QL + M GL P
Sbjct: 365 RAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 213/455 (46%), Gaps = 8/455 (1%)
Query: 156 VKDCPHSVDVFQDLIS-----CTEDCNWAYVKVGLIRE---SFKTFRKTLDVGFQPSIVS 207
VK ++D + +++ C +D N + V ++ + + +G +P++ +
Sbjct: 56 VKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPT 115
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
N ++N L +LN + V M +IG+ P+ TF + + C G+V + F++ ++
Sbjct: 116 HNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 175
Query: 268 EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
+ G++ D T +I+ CK G + A + M +N D+ Y +++GLCK+G V
Sbjct: 176 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVF 235
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA LF +M +G+ PD+ +YN LI C + +E+ LL MM GI PD T +I
Sbjct: 236 EAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIG 295
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ K G + A ++ + G+ Y +I C N+ A + + + + G +
Sbjct: 296 GRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCL 355
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ Y L+ C+ ++ A+ EMV+ + P++ T+ LI FC G+ A L
Sbjct: 356 PNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKEL 415
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
M + G LPD Q C ++++G ++A +L K D Y+ + N
Sbjct: 416 FFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCS 475
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L+ +EL G + +T MI+ L K
Sbjct: 476 SGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCK 510
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 175/369 (47%), Gaps = 4/369 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G++ E++ F + G QP + + N L++GL + + + M R GI P+
Sbjct: 230 KDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 289
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN++ F K G + + + G + D+VTY+++I +C ++ DA ++ +M
Sbjct: 290 TFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLM 349
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ LP++VTYT+L++G C+ + +A MV+ GL P+IV++NTLI +CK GK
Sbjct: 350 IRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKP 409
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+K L + M +G PD TC II+ G K A++L EL++ + IY +
Sbjct: 410 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 469
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ +C + A L + G + YN ++ LCK + DA L +M +
Sbjct: 470 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 529
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P TY + ++ + M G ++ ++LIN + NK
Sbjct: 530 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYF----SANKENR 585
Query: 542 LLGFFAKKF 550
F +KF
Sbjct: 586 AFQVFLQKF 594
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 213/491 (43%), Gaps = 10/491 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+ +KP + ++++ L N F +L + + + V +++ T N
Sbjct: 107 IGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFK--------IGVEPSIVTFTTIVNGL 158
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
V+ G + ++ + D+G++ + ++NGL K+ ++M +
Sbjct: 159 CVE-GNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLD 217
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+N + CK+G V + ++ +G PDL TYN LI C R +A L
Sbjct: 218 VTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLA 277
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R+ ++PD+ T+ + K G + A +F M H G+ D+V+Y+++I +C
Sbjct: 278 NMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLN 337
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+M+++ + M+ G P+ T ++ G+ + + A+ + E+ G+ + ++
Sbjct: 338 QMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWN 397
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI C+ +P AA L + + G +P L+ +++ L KC ++A+ L E+
Sbjct: 398 TLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKM 457
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N + Y ++ C G+ +A+ L + G+ D ++ING C E ++ A
Sbjct: 458 NSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDA 517
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
E LL + D +YN ++SK + GF N T K +I+
Sbjct: 518 EDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINY 577
Query: 600 LWKGME-RKFQ 609
E R FQ
Sbjct: 578 FSANKENRAFQ 588
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 171/392 (43%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L+ L + +D Y +M + P FN+L + K ++ + G
Sbjct: 49 FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIG 108
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++ T+N +I+ C+ F + +M++ V P +VT+TT++NGLC EG V +A
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ + G D + +I CK G + S L +M D +V G
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGL 228
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K+G + A +L ++ G+ Y+ LI LC +R A LL + + G +P +
Sbjct: 229 CKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 288
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+ +N + K ++ A + M I+ + TY ++I C + + +A+ + D
Sbjct: 289 QTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDL 348
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ G LP+ LI+G+C K++NKA LG + ++N + F + G
Sbjct: 349 MIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGK 408
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL + G P+ TC ++ L+K
Sbjct: 409 PVAAKELFFVMHKHGQLPDLQTCAIILDGLFK 440
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 223/521 (42%), Gaps = 46/521 (8%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+ + + P YC ++ LA + S ++ +L E+V S V DL+ T +
Sbjct: 319 DKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMV--------SRGVVMDLVMYTALMD 370
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
K G I E+ R P+ V+ L++ + ID QV +M +
Sbjct: 371 R-LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI 429
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC----------- 286
PN TF+ + + K G + K ++ K+++ G P++VTY TLI +
Sbjct: 430 PNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489
Query: 287 ------------------------KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K G + A L++ M R +L D V YTTLM+GL K
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + A ++ ++ + LSPD V YN I C GK E+KS L EM G+ PD T
Sbjct: 550 TGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQAT 609
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ +EG+ AL L+ E++R + + Y L+V L + A LL +
Sbjct: 610 YNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMA 669
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALL-LKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G+ P+ + ++++ C D +L + + M+ + ++ Y L+ C G +
Sbjct: 670 SAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMA 728
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A ++DEML G+ PD+ LI G+C ++ A A+ + + ++N +
Sbjct: 729 RNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTL 788
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G + + + ++G PNNLT ++ K
Sbjct: 789 LGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAK 829
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/501 (26%), Positives = 223/501 (44%), Gaps = 48/501 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++V A ++L ++ E K +V F +I+ V
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE--KSVIPNVVTFSSIIN-------GLV 443
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ RK D G P++V+ L++G K + VY +M G+ N
Sbjct: 444 KRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNF 503
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ L + KNG+++ + ++E G D V Y TL+ K G + AF + + +
Sbjct: 504 VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+N+ PD V Y +N LC GK EA M + GL PD +YNT+I A C+EGK
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKT 623
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG-------------------------RL 396
++ LL EM N I P+ T +V G + G R+
Sbjct: 624 SKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRV 683
Query: 397 LSAL------NLVVELQRF--GVSISRDI--YDYLIVALCQDNRPFAATSLLERIGQDGY 446
L A ++++E+ G + DI Y+ L+ LC AT +L+ + G
Sbjct: 684 LQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGI 743
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P +N L+ CK + +A + +M+ + + P+++T+ L+ GR GEA +
Sbjct: 744 APDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADT 803
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF--FAKKFQIYDTESYNAVFNM 564
++ +M + G+ P++ +L+ GY K NK EAL + K I +YN++ +
Sbjct: 804 VLSDMKKVGLEPNNLTYDILVTGYA--KKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861
Query: 565 FAEDGDLSKLMELQKRFLRLG 585
FA+ G +++ EL R G
Sbjct: 862 FAKAGMMNQAKELFSEMKRRG 882
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 196/396 (49%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+V N L++G K+ + V E M G+ + +N L F +GD D +E
Sbjct: 187 VVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVE 246
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+++ +G +P++VTY LI YCK +++AF LY M R VLPD+VT + L++GLC++G
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDG 306
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ EA+ LF M G++P+ V+Y TLI + K + ES LL EM+ G+ D
Sbjct: 307 QFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYT 366
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ GKEG++ A +++ Q ++ + Y L+ A C+ A +L ++ +
Sbjct: 367 ALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEK 426
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+P++ ++ ++ L K + A +M D I P++ TY LI F A
Sbjct: 427 SVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAA 486
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ + +ML G+ ++ + L+NG ++ AEAL ++ + D +Y + +
Sbjct: 487 LDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDG 546
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ G++ ++ + + +P+ + I+ L
Sbjct: 547 LFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCL 582
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 199/420 (47%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K + E+F + + G P +V+ + L++GL + + + ++ EM +IG+ PN
Sbjct: 267 YCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPN 326
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L K + G L ++ G DLV Y L+ K+G++ +A + R
Sbjct: 327 HVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLR 386
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
N+ P+ VTYT L++ C+ G + A Q+ +M + + P++V+++++I K G
Sbjct: 387 HAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRG 446
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ ++ + +M +GI P+ T ++ G+ K +AL++ ++ GV + + D
Sbjct: 447 CLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVD 506
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ L ++ A +L + + + G + Y LM+ L K ++ A + E++++
Sbjct: 507 SLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEK 566
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ P Y I C C +G+ EA S + EM +G+ PD +I C E +KA
Sbjct: 567 NLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKA 626
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL + + +Y + E G + K L GFAP +LT + ++ +
Sbjct: 627 LKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 162/352 (46%), Gaps = 6/352 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + +FK ++ ++ P V N +N L L + +EM G+ P+
Sbjct: 549 KTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQA 608
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + C+ G K L++++ P+L+TY TL+ + G + A +L M
Sbjct: 609 TYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEM 668
Query: 302 YRRNVLPDLVTYTTLM---NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
P +T+ ++ +G + + E H+L M+ GL DI YNTL+ C
Sbjct: 669 ASAGFAPTSLTHQRVLQACSGSRRPDVILEIHEL---MMGAGLHADITVYNTLVHVLCCH 725
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + +L EM+ GI PDT T ++ G+ K L +A + ++ G+S + +
Sbjct: 726 GMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATF 785
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ L R A ++L + + G P+ Y+ L+ K + +AL L EMV
Sbjct: 786 NTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVS 845
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ P STY +L+ F G +A L EM G+L S +L+NG+
Sbjct: 846 KGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW 897
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 169/399 (42%), Gaps = 2/399 (0%)
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
VS N L L + V EM + G+ + T + C+ G V + E
Sbjct: 116 VSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEM 175
Query: 266 -IEEEGFDP-DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ G D D+V +N LI YCK + A + M + V D+V Y +L+ G
Sbjct: 176 LVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHS 235
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G A ++ RM G+ P++V+Y LI YCK M E+ SL M+ +G+ PD T
Sbjct: 236 GDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTL 295
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+V G ++G+ A L E+ + GV+ + Y LI +L + R + LL +
Sbjct: 296 SALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS 355
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G V L +Y LM+ L K + +A + NI P+ TY L+ C G
Sbjct: 356 RGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDG 415
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A ++ +M E ++P+ +ING + KA + + +Y + +
Sbjct: 416 AEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLID 475
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + +++ + L G NN +++ L K
Sbjct: 476 GFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRK 514
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G ++ K ++ +P++++ L+ GLL+ + + + EM G P
Sbjct: 616 ARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAP 675
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T + + D + E + G D+ YNTL+ C G +A +
Sbjct: 676 TSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVL 735
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R + PD +T+ L+ G CK + A ++ +M+H+GLSP+I ++NTL+
Sbjct: 736 DEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESA 795
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E+ ++L +M G+ P+ T I+V GY K+ + AL L E+ G Y
Sbjct: 796 GRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTY 855
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ + A L + + G + + Y+ L+ K + + +L +M +
Sbjct: 856 NSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKE 915
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
KPS T ++ F G +GEA L+ + +
Sbjct: 916 LGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 8/333 (2%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN----VLPDLVTYTTLMNGLCKEGKVREA 329
D +T N++I SYC L A L R V D V+Y + L ++G R A
Sbjct: 75 DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM--GNGIYP-DTFTCQII 386
+ M RG+S D V+ +T + C+ G + E+ + L EM+ G GI D +
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAA-LAEMLVRGRGIDGLDVVGWNAL 193
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K + +AL +V + GV++ Y+ L+ AA ++ER+ DG
Sbjct: 194 IDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGV 253
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P++ Y L+ CK + +A L + MV + P + T AL+ C G+ EA +
Sbjct: 254 EPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYA 313
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L EM + G+ P+ LI+ + +++ LLG + + D Y A+ +
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++G + + ++ + PN +T ++ +
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDA 406
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 6/270 (2%)
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLL----YEMMGNGIYPDTFTCQIIVQGYGKEG 394
R + D ++ N++I +YC ++ + SLL + + DT + I + ++G
Sbjct: 70 RPVPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQG 129
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI-- 452
A ++ E+ + GVS +V LC+ A +L E + + + L++
Sbjct: 130 HGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVG 189
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+N L++ CK +A AL + + M + + + Y +L+ F G + A+ +++ M
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ P+ LI YC K +++A +L + + D + +A+ + DG S
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ L + ++G APN++T +I SL K
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAK 339
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 6/140 (4%)
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC---RVLINGYC 531
EM R + T + C G GEA +L EML G D LI+GYC
Sbjct: 140 EMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA-EMLVRGRGIDGLDVVGWNALIDGYC 198
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+D+ A A++ + D YN++ F GD +E+ +R G PN +
Sbjct: 199 KVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVV 258
Query: 592 TCKYMIHSL--WKGMERKFQ 609
T +I KGM+ F
Sbjct: 259 TYTALIGEYCKGKGMDEAFS 278
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 235/529 (44%), Gaps = 28/529 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
RVL + A FFNW++ ++K + + ++ ILA N+ S A + + L
Sbjct: 126 RVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSINL- 184
Query: 157 KDCPHSVDVFQDLISCTED----------CNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
H +D LI D W Y K + + +F K + GF PS+
Sbjct: 185 --GMHEIDDL--LIDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVR 240
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L L +++ +VYE M GI P TFN + K GD+++V+ ++
Sbjct: 241 NCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM 300
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ + VTYN LI+ + K G++ +A + M R ++ L+ G CK+G
Sbjct: 301 KRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLF 360
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA + M++ G+ P +YN I A C+ G++ +++ LL M PD + +
Sbjct: 361 DEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTL 416
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K + + A L +L+ ++ S Y+ LI LC+ A L E +
Sbjct: 417 MHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLI 476
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + Y L++ K +++ A + DEM+ + IKP Y +G S +A
Sbjct: 477 YPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFR 536
Query: 507 LMDEML-ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ---IYDTESYNAVF 562
L +EM+ E PD I V I+G C ++ KA + F K F+ + D +Y V
Sbjct: 537 LHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKA---IEFQRKIFRVGLVPDHVTYTTVI 593
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
+ E G +L L +P+ +T +IH K +E+ FQ
Sbjct: 594 RGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQ 642
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 190/434 (43%), Gaps = 17/434 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + E+ + GF + S N L+ G K D+ W V +EM GI P
Sbjct: 318 GFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYP 377
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T T+NI C+ G +D L + PD+V+YNTL+ Y K + +A L+
Sbjct: 378 TTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFVEASLLF 433
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ N+ P +VTY TL++GLC+ G + A +L M + + PD+++Y TL+ + K
Sbjct: 434 DDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKN 493
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD-- 416
G + + + EM+ GI PD + G + G A L E+ ++ D
Sbjct: 494 GNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEM------VAEDHH 547
Query: 417 -----IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
IY+ I LC+ A +I + G VP Y ++ + A
Sbjct: 548 APDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARD 607
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L DEM+ + + PS+ TY LI GR +A EM + G+ P+ L++G C
Sbjct: 608 LYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMC 667
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
++++A L ++ + SY + + + ++++L K L P+
Sbjct: 668 KAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGY 727
Query: 592 TCKYMIHSLWKGME 605
T + + L K E
Sbjct: 728 THRALFKHLEKDHE 741
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 184/401 (45%), Gaps = 21/401 (5%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I PT+S Y + + L + A ++L + P V + L+ Y+
Sbjct: 375 IYPTTSTYNIYIRALCEFGRIDDARELLSSMA-----APDVVS-YNTLMH-------GYI 421
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+ E+ F PSIV+ N L++GL + ++ ++ EEM I P+
Sbjct: 422 KMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVI 481
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ L F KNG++ +++ +G PD Y T + G AF L+ M
Sbjct: 482 TYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEM 541
Query: 302 YRRNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ PDL Y ++GLCK G + +A + ++ GL PD V+Y T+I Y ++G+
Sbjct: 542 VAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGR 601
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ L EM+ + P T +++ G+ K GRL A E+++ GV + ++
Sbjct: 602 FKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNA 661
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ +C+ A L ++ ++G P+ Y L+ C D + + L EM+D+
Sbjct: 662 LLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKE 721
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
I+P T+RAL F + + E+++L SG P+ Q
Sbjct: 722 IEPDGYTHRAL---FKHLEKDHESMALD----SSGKQPEQQ 755
>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Brachypodium distachyon]
Length = 620
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 189/378 (50%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK +K F + L G PS+V+ N L+N + + W+V+ +M I PN
Sbjct: 136 VKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNV 195
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T++ + V C+ G V + ++E G P+L TYN L+SS+CK+ +N LY+
Sbjct: 196 VTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQE 255
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + ++P+ V TTL+ G ++ + F M G++P + YN+LI + G
Sbjct: 256 LLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGY 315
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
QE+ ++ +M G+ PD FTC IIV+G G++ A + +Q+ G++++ Y+
Sbjct: 316 AQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNA 375
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+D A + R+ + G P++ Y+ L++ K + A+ + EMV +
Sbjct: 376 LIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKG 435
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++P++ TY A+I G A L EM E G+ ++ VL++G C E V A
Sbjct: 436 VEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAV 495
Query: 541 ALLGFFAKKFQIYDTESY 558
+ +A + + D S+
Sbjct: 496 MFIMKYAGQKKPGDINSF 513
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 183/400 (45%), Gaps = 35/400 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ +CN +L+GL+K D+ W++++EM
Sbjct: 123 PALPACNAILDGLVKARRFDRVWKLFDEM------------------------------- 151
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
G P LVTYNTL+++ +G + A+ ++ M R + P++VTY+T++ LC+
Sbjct: 152 ----LSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCE 207
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EG V EA +LF M G+ P++ +YN L+ ++CK + + +L E++ +G+ P+
Sbjct: 208 EGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVI 267
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ G+ R+ N +E+ R+G++ + +Y+ LI + A ++ + +
Sbjct: 268 ITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMT 327
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + ++ LC V A + M I + + Y ALI C G
Sbjct: 328 RVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLA 387
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA++ M E G+ P+ LI+G+ ++ + A + K + +Y A+
Sbjct: 388 EALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMI 447
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ A+ GDL L K G + N +T ++ L +
Sbjct: 448 HGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCR 487
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 22/304 (7%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P++ N L++G + + VY++M R+G+CP+ T +I+ C G V
Sbjct: 295 GIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVA 354
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
FLE +++ G + + YN LI +CK G L +A M + P++VTY++L++G
Sbjct: 355 TRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDG 414
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
K+ K+ A ++ MV +G+ P++++Y +I + K G + + L EM GI +
Sbjct: 415 HSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSN 474
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--------------------YD 419
T ++V G +E R+ A+ + ++ G DI Y
Sbjct: 475 AITVSVLVDGLCRESRVQDAVMFI--MKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYM 532
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI L D + A + + VP Y+ L+ C V +A++L +MV
Sbjct: 533 TLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKI 592
Query: 480 NIKP 483
+KP
Sbjct: 593 GVKP 596
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 20/368 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + F + G QP++ + N L++ K + +++ +Y+E+ + G+ PN
Sbjct: 209 GCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVII 268
Query: 244 NILTH-VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L F N D N FLE + G P + YN+LI + G +A +Y+ M
Sbjct: 269 TTLIGGFFLANRISDVKNAFLE-MHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMT 327
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + PD T + ++ GLC G+V+ A + M G++ + +YN LI +CK+G +
Sbjct: 328 RVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLA 387
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ + M GI P+ T ++ G+ K+ ++ A+ + +E+ GV + Y +I
Sbjct: 388 EALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMI 447
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+ AA L + + + G + + L++ LC+ V DA++ + +
Sbjct: 448 HGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQKKP 507
Query: 483 PSLS------------------TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
++ TY LI G+ EA M ES M+PDS
Sbjct: 508 GDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYS 567
Query: 525 VLINGYCM 532
+LI G CM
Sbjct: 568 LLIRGQCM 575
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 5/329 (1%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
L+ + + G +DA ++ R LP L +++GL K + +LF M+
Sbjct: 97 GVLVIALSQMGLHDDALSVF---CRLPTLPALPACNAILDGLVKARRFDRVWKLFDEMLS 153
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ P +V+YNTL+ A EG M ++ + +M+ I P+ T ++ +EG ++
Sbjct: 154 RGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIE 213
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L + ++ GV + Y+ L+ + C+ + +L + + + G VP+ I L+
Sbjct: 214 AERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIG 273
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ ++D EM I P++ Y +LI G + EA+++ +M G+ P
Sbjct: 274 GFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCP 333
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D C +++ G C V A L + + +YNA+ + +DG+L++ +
Sbjct: 334 DEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATC 393
Query: 579 KRFLRLGFAPNNLTCKYMI--HSLWKGME 605
R +G PN +T +I HS + ME
Sbjct: 394 TRMNEVGIEPNVVTYSSLIDGHSKKRKME 422
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 53/287 (18%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G +E+ ++ VG P +C+ ++ GL + + E M + GI N
Sbjct: 312 RSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAA 371
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L CK+G++ + ++ E G +P++VTY++LI + KK ++ A +Y M
Sbjct: 372 AYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEM 431
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++TYT +++G K G + A +L M +G+S + ++ + L+ C+E ++
Sbjct: 432 VAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRV 491
Query: 362 QES-------------------------------------KSLLYEMMGNGIY------- 377
Q++ +L+Y + +G Y
Sbjct: 492 QDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFF 551
Query: 378 ---------PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
PD+FT ++++G G +L+A+ L ++ + GV R
Sbjct: 552 SCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKPRR 598
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 103/222 (46%), Gaps = 20/222 (9%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ K G + E+ T + +VG +P++V+ + L++G K ++ +Y EM G+ PN
Sbjct: 380 HCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPN 439
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ + H K GD+D +++ E+G + +T + L+ C++ R+ DA ++
Sbjct: 440 VLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAV-MFI 498
Query: 300 IMYRRNVLP-------------------DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+ Y P + VTY TL+ GL +G+ EA + F M
Sbjct: 499 MKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESD 558
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ PD +Y+ LI C G + + L +M+ G+ P +
Sbjct: 559 MVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKPRRYA 600
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 203/425 (47%), Gaps = 4/425 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + G R FR+ ++G P++V+ + ++GL + + Q + V EEM G+ P
Sbjct: 225 AFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKP 284
Query: 239 NTHTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +T L CK G +++ FL+ ++ + P++ TY +I YCK+G+L A L
Sbjct: 285 NVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 344
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + + P+ TYTTL++G CK G A +L ++M G P+I +YN +I +CK
Sbjct: 345 LGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCK 404
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+GK+QE+ +L G++ D T I++ + K+G + AL+L ++
Sbjct: 405 KGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHT 464
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y +I CQ + + L ++ G VP+ + Y ++ C+ + AL + + MV
Sbjct: 465 YTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMV 524
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P TY ALI C R EA +L + ML+ ++P L YC +
Sbjct: 525 QHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKIT 584
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A + L K+ Q + + +A+ + G+L K L +A ++ T I
Sbjct: 585 IAVSFLDRLDKRQQAH---TADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFI 641
Query: 598 HSLWK 602
+S ++
Sbjct: 642 NSCYE 646
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 203/425 (47%), Gaps = 4/425 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN-GLLKLNCIDQCWQVYEEMGRI--GICP 238
+ G +RE+ + G + + N++L GL C + ++ M R G+ P
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +F L C+ G ++ + L + +GF D T ++ ++C++GR + L+
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M P++V Y+ ++GLC+ G V++A + MV +GL P++ ++ +LI CK
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299
Query: 359 GKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G M+ + L +++ + Y P+ T +++ GY KEG+L A L+ + G++ + +
Sbjct: 300 GWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C+ A L+ ++ +G++P++ YN ++ CK + +A +
Sbjct: 360 YTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMAT 419
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ + TY LI C G A+ L +M E PD +I YC ++ +
Sbjct: 420 SQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQME 479
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+++ L + ++Y ++ + G L+ +++ +R ++ G P+++T +I
Sbjct: 480 QSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALI 539
Query: 598 HSLWK 602
SL K
Sbjct: 540 SSLCK 544
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 133/330 (40%), Gaps = 78/330 (23%)
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYT--TLMNGLCKEGKVREAHQLFHRMVHR--GLS 342
+ GRL +A + + R + LP +V L GL G A + F M G+
Sbjct: 120 EAGRLREAADML-LELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVR 178
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD S+ L+ C+EG+ +E+ +LL M G D+ TC ++V+ + ++GR
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRF------ 232
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
R++ D L R+ + G P++ Y+ ++ LC+
Sbjct: 233 ------------RNVTD-----------------LFRRMSEMGTPPNMVNYSAWIDGLCE 263
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML-PDSQ 521
V A + +EMV + +KP++ T+ +LI C IG A L ++++S P+
Sbjct: 264 RGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVH 323
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
V+I GYC E G L++ L R
Sbjct: 324 TYTVMIGGYCKE-----------------------------------GKLARAEMLLGRM 348
Query: 582 LRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
+ G APN T +IH KG +R F+
Sbjct: 349 VEQGLAPNTNTYTTLIHGHCKGGSFDRAFE 378
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 196/383 (51%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ ++G + E+ K +++ + GFQ SI+S LL L K +D ++++ EM G+ P
Sbjct: 395 GHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRP 454
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ L H CK G+V + EK+ P+ + + ++ C+KG+++ A +
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ N+ D++ Y +++G K G REA +L+ ++ +G+SP IV++N+L++ +C
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCIN 574
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ +++ LL + +G+ P+ T ++ Y +EG + S L L+ E++ + + Y
Sbjct: 575 RKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITY 634
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+I LC+ + + LLE + G P YN ++++ CK + A L D+M+
Sbjct: 635 TVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLL 694
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
N++P+ TY LI FC G +A +L+ + + + +I +C + DV+K
Sbjct: 695 HNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDK 754
Query: 539 AEALLGFFAKKFQIYDTESYNAV 561
A +K Y+AV
Sbjct: 755 AVVYFRQMVEKGFEVSIRDYSAV 777
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 263/605 (43%), Gaps = 63/605 (10%)
Query: 55 TQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQ-SDSVSALTFF 113
T +P V +I S LK + Q K + L ++ +++ D+ SA+ F+
Sbjct: 54 TPDPGDPVPVILSGLKYSVFKRFMDQCLFKEKIFMLNHSQVDQIIEHLNVEDADSAVDFY 113
Query: 114 NWVKNDLEIKPTSSNYCLIVHILAWNNKF---------------SFAMKMLCELVELVKD 158
+ N+ + + + ++ H+LA + S + LCEL+
Sbjct: 114 YLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFR 173
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
S +V D+++C AY + ++ ++ K D+ F SI + N LL L
Sbjct: 174 SWDSSNVVWDMLAC------AYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHS 227
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N + W VY E+ G + +T +I+ C+ F + E + F P +V++
Sbjct: 228 NIM---WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSF 284
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NT++S YCK G ++ A + +M + +LPD +Y L++GLC G + EA L + M +
Sbjct: 285 NTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMEN 344
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
GL PD+V+YN L + G + + +++ +M+ G P+ T +++ G+ + G +
Sbjct: 345 HGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEE 404
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL L E+ G +S L+ +LC+ + A L + +G P L Y+ L+
Sbjct: 405 ALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIH 464
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR------------------ 500
LCK V A+LL ++M I P+ + A++ C G+
Sbjct: 465 GLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSL 524
Query: 501 -----------------SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ EAV L ++ E G+ P L+ G+C+ + +++A LL
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL--- 600
+ +Y + N++ E+G++ L+EL P ++T +I L
Sbjct: 585 DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQ 644
Query: 601 WKGME 605
WK E
Sbjct: 645 WKLQE 649
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 194/399 (48%), Gaps = 24/399 (6%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P +V+ N L G L I+ W + ++M G PN T+ +L C+ G+V++
Sbjct: 346 GLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEA 405
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ GF +++ L+ S CK +++ AF L+ M + PDL+TY+TL++G
Sbjct: 406 LKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHG 465
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+G+V++A L+ +M + P+ + + ++ C++GK+ +++ ++ + + D
Sbjct: 466 LCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLD 525
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
I++ GY K G A+ L +L G+S + ++ L+ C + + A LL+
Sbjct: 526 IILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLD 585
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
I G P+ Y LM C+ ++ L L EM + I P+ TY +I C
Sbjct: 586 TIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQW 645
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD----- 554
+ E+ L+++M G+ PD +I +C +D+ KA FQ+YD
Sbjct: 646 KLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKA----------FQLYDKMLLH 695
Query: 555 -----TESYNAVFNMFAEDGDLSK----LMELQKRFLRL 584
+ +YN + N F GDL L+ LQ R + L
Sbjct: 696 NLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNL 734
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 199/443 (44%), Gaps = 35/443 (7%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F+ T FQPS+VS N +++ KL +D + M + G+ P+ +++NIL H C
Sbjct: 269 FQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCI 328
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + +E G +PD+VTYN L + G +N A+ + + M + P+LVT
Sbjct: 329 AGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVT 388
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRG-------------------------------- 340
YT L+ G C+ G V EA +L+ M+ G
Sbjct: 389 YTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEME 448
Query: 341 ---LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
L PD+++Y+TLI CK+G++Q++ L +M N I P++ I+ G ++G++
Sbjct: 449 ANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKIS 508
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A L +S+ +Y+ +I + A L +++G+ G P++ +N LM
Sbjct: 509 QARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
C ++ A L D + ++P+ TY L+ +C G + L+ EM +
Sbjct: 569 YGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG 628
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P V+I G C + + ++ LL D SYN + F + D+ K +L
Sbjct: 629 PTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQL 688
Query: 578 QKRFLRLGFAPNNLTCKYMIHSL 600
+ L P ++T +I+
Sbjct: 689 YDKMLLHNLEPTSVTYNILINGF 711
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 192/404 (47%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+GLI ++ +K L G P++V+ L+ G ++ +++ ++Y+EM G + +
Sbjct: 364 LGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+L CK+ VD ++E G PDL+TY+TLI CK+G + A LY M
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMC 483
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++P+ + + ++ GLC++GK+ +A F ++ LS DI+ YN +I Y K G +
Sbjct: 484 SNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTR 543
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ L ++ GI P T ++ G+ +L A L+ ++ G+ + Y L+
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLM 603
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ + LL + P+ Y +++ LCK + ++ L ++M +
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P +Y +I FC +A L D+ML + P S +LING+C+ D+ A+ L
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
L + + +Y + GD+ K + ++ + GF
Sbjct: 724 LVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 170/334 (50%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I ++ F + I+ N +++G +K + ++Y+++G GI P TF
Sbjct: 505 GKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTF 564
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FC N + + L+ I+ G +P+ VTY TL++ YC++G + L M
Sbjct: 565 NSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKA 624
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P +TYT ++ GLCK+ K++E+ QL M GL+PD VSYNT+I A+CK M++
Sbjct: 625 KAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRK 684
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L +M+ + + P + T I++ G+ G L A NL+V LQ V++++ Y +I
Sbjct: 685 AFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIK 744
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C A ++ + G+ S+ Y+ ++ LCK V +A M+ + P
Sbjct: 745 AHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCP 804
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ L+ F G L+ EM++SG L
Sbjct: 805 DQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 145/299 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K G RE+ K +++ + G P+IV+ N L+ G + Q ++ + + G+ P
Sbjct: 535 GYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEP 594
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L +V+C+ G++ + L +++ + P +TY +I CK+ +L ++ L
Sbjct: 595 NAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLL 654
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD V+Y T++ CK +R+A QL+ +M+ L P V+YN LI +C
Sbjct: 655 EDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVY 714
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++++ +LL + + + + I++ + +G + A+ ++ G +S Y
Sbjct: 715 GDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDY 774
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+I LC+ A + DG P +++ L+ + +C + L EM+
Sbjct: 775 SAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMI 833
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 218/465 (46%), Gaps = 26/465 (5%)
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD 198
NN + A+ + L +L P S+ F +I+C Y +G + +F K L
Sbjct: 61 NNNYPIAISLYHRL-QLNAITP-SIVTFNTVINC-------YCHLGEMDFAFSVLAKILK 111
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G+ P ++ L+ GL + + ++ + G N ++ IL + CK G+
Sbjct: 112 MGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRA 171
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L KI+ + + ++V Y+T+I S CK+ + +A+ LY M + V PD+VT++ L+
Sbjct: 172 ALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIY 231
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM------ 372
G C G+ +EA LFH MV ++PD+ ++N L+ A CKEG +E+K++L MM
Sbjct: 232 GFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQV 291
Query: 373 -----------GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ PD + II++ K + AL+L E++ G++ + Y L
Sbjct: 292 NKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSL 351
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ R A LL+++ G + Y + +LCK V A+ L ++ D+ I
Sbjct: 352 IDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGI 411
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+++TY LI C GR A + ++L G ++ING C+E ++A
Sbjct: 412 QPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMT 471
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
LL D +Y + ++ + K +L + + G
Sbjct: 472 LLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 205/423 (48%), Gaps = 17/423 (4%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
PSIV+ N ++N L +D + V ++ ++G P+T T L C NG V +
Sbjct: 78 AITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEA 137
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F + + GF + V+Y LI+ CK G A + R + + V ++V Y+T+++
Sbjct: 138 LHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDS 197
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCKE V EA++L+ +M+ + +SPD+V+++ LI+ +C G+ +E+ L +EM+ I PD
Sbjct: 198 LCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPD 257
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQR-----------FGV----SISRDIYDYLIVA 424
T I+V KEG N++ + + F + ++ D++ Y I+
Sbjct: 258 VCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIII 317
Query: 425 --LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ A SL + G P Y+ L++ LCK + ++ A L D+M R
Sbjct: 318 KRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQP 377
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY + + C + +AV+L+ ++ + G+ P+ +LI+G C E A+ +
Sbjct: 378 ADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVI 437
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K +YN + N +G + M L ++ G P+ +T + +I +L+K
Sbjct: 438 FQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFK 497
Query: 603 GME 605
E
Sbjct: 498 NDE 500
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 173/355 (48%), Gaps = 17/355 (4%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G R + + RK ++V + +++ L K + + +++Y +M + P+
Sbjct: 165 KMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVV 224
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG------------ 289
TF+ L + FC G + G ++ +PD+ T+N L+ + CK+G
Sbjct: 225 TFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVM 284
Query: 290 -----RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
++N A +++ I+ +R V PD+ +YT ++ LCK V EA LF+ M +G++PD
Sbjct: 285 MKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPD 344
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V+Y++LI CK ++ + LL +M G D T + K ++ A+ LV
Sbjct: 345 KVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVK 404
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+++ G+ + + Y+ LI LC++ R A + + + GY ++ YN ++ LC
Sbjct: 405 KIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEG 464
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+A+ L ++M D P + TY +I + +A L+ EM+ G+L +
Sbjct: 465 LFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEE 519
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 136/331 (41%), Gaps = 54/331 (16%)
Query: 326 VREAHQLFHRMVHRGLSPDIVS-------------------------------------Y 348
V +A F+RM+ SP I+ +
Sbjct: 27 VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NT+I YC G+M + S+L +++ G +PDT T +++G G++ AL+ +
Sbjct: 87 NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G ++ Y LI LC+ AA +L +I ++ +Y+ +++SLCK V +
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L +M+ + + P + T+ ALI FC +G+ EA L EM+ + + PD +L++
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266
Query: 529 GYCME-----------------KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
C E VNKA+ + K+ D SY + + +
Sbjct: 267 ALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMV 326
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + L G P+ +T +I L K
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGLCK 357
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 10/203 (4%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL+ FN ++ I P Y ++ L + + S A ++L D H+ D
Sbjct: 329 ALSLFNEMRCK-GITPDKVTYSSLIDGLCKSERISHAWELL--------DQMHARGQPAD 379
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
+I+ T + A K + ++ +K D G QP+I + N L++GL K + ++
Sbjct: 380 VITYTSFLH-ALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIF 438
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+++ G T+NI+ + C G D+ LEK+E+ G PD+VTY T+I + K
Sbjct: 439 QDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKN 498
Query: 289 GRLNDAFYLYRIMYRRNVLPDLV 311
+ A L R M R +L + V
Sbjct: 499 DENHKAEKLLREMIARGLLEEKV 521
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/490 (26%), Positives = 226/490 (46%), Gaps = 53/490 (10%)
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
N ++ L+P + HE+ +L +S AL FF WV+ + + I+ IL +
Sbjct: 1 NSIRNLVPSID-HELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRAS 59
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
K + A C L+++ K ++ +DL D +Y K G+++ES K F+K ++G
Sbjct: 60 KLNHAR---CILLDMPK---KGLEWDEDLWVLMID---SYGKAGIVQESVKMFQKMEELG 110
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ +I S + L +L+ + + +M GI P HTFN++ F +G V+ N
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
F E ++ PD+VTYNT+++ YC+ ++ +A + M RN+ P +VTYTTL+ G
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP-D 379
+V +A +L M G+ P+ ++Y+TL+ C KM E++S+L EM+ I P D
Sbjct: 231 VSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTD 290
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
++ G K G L +A N++ + R V Y LI C+ A LL+
Sbjct: 291 NSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLD 350
Query: 440 RIGQDGYV--PSLEI------YNELMESLCKCDSVADALLLKDE---------------- 475
++ + + P + YN L+E LC A A L +
Sbjct: 351 KVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLI 410
Query: 476 ------------------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
M+ R + S+Y +L+ + +A + +D M+E+G L
Sbjct: 411 RGHSQEGSPDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHL 470
Query: 518 PDSQICRVLI 527
PDS + R ++
Sbjct: 471 PDSSLFRSVM 480
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 166/380 (43%), Gaps = 45/380 (11%)
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M + G+ + + ++ + K G V + +K+EE G + + +Y+ L ++G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R A + M + P T+ +M G GKV A++ F M R + PD+V+YN
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYN 189
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T++ YC+ KM+E++ EM G I P T +++GY R+ AL LV E++ F
Sbjct: 190 TMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGF 249
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ +P A T Y+ L+ LC + +++A
Sbjct: 250 GM------------------KPNAIT-----------------YSTLLPGLCNAEKMSEA 274
Query: 470 LLLKDEMVDRNIKPS-LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
+ EMV++ I P+ S + LI C G A +++ M+ + ++ VLI
Sbjct: 275 RSILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIE 334
Query: 529 GYCMEKDVNKAEALLGFFAKKFQI--------YDTESYNAVFNMFAEDGDLSKLMELQKR 580
YC + +KA LL +K I ++ +YN + +G +K L ++
Sbjct: 335 NYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQ 394
Query: 581 FLRLGFA-PNNLTCKYMIHS 599
++LG P L HS
Sbjct: 395 LMKLGVQDPTALNTLIRGHS 414
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 181/373 (48%), Gaps = 21/373 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
+V+LR + + A +FN + ++ I+PT + +++ W S ++ E +
Sbjct: 123 KVILR-RGRYMMAKRYFNKMLSE-GIEPTRHTF----NVMMWGFFLSGKVETANRFFEDM 176
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K S ++ D+++ N Y +V + E+ K F + +P++V+ L+ G +
Sbjct: 177 K----SREIMPDVVTYNTMVN-GYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYV 231
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP-DL 275
++ +D ++ EEM G+ PN T++ L C + + L+++ E+ P D
Sbjct: 232 SVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDN 291
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ LIS CK G L+ A + + M R +V + Y L+ CK G+ +A +L +
Sbjct: 292 SIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDK 351
Query: 336 MVHRG--LSP------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
++ + L P + +YN LI C G+ ++++L+ ++M G+ D ++
Sbjct: 352 VIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGV-QDPTALNTLI 410
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+G+ +EG SA L+ + R V + YD L+ + + N P A + L+ + ++G++
Sbjct: 411 RGHSQEGSPDSAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIENGHL 470
Query: 448 PSLEIYNELMESL 460
P ++ +MESL
Sbjct: 471 PDSSLFRSVMESL 483
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 198/408 (48%), Gaps = 5/408 (1%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+++ P+ +S N ++ L KL +D+ +V+ M P+ +T+ L CK +
Sbjct: 179 MNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D+ L++++ EG P V YN LI CKKG L L M+ + +P+ VTY TL
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GLC +GK+ +A L RMV P+ V+Y TLI K+ + ++ LL M G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+ + +++ G KEG+ A++L ++ G + +Y L+ LC++ +P A
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+L R+ G +P+ Y+ LM+ K +A+ + EM + Y LI C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC----MEKDVNKAEALLGFFAKKFQI 552
G+GR EA+ + +ML G+ PD+ +I G C M+ + +L K Q
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ- 537
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
D +YN + + D+S+ ++L L G P+ +TC +++L
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 17/226 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K GL E+ + +++ G + + L++GL + + + V+ +M IGI P
Sbjct: 441 GFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKP 500
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKI---EEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+T ++ + C G +D ++ EE PD+VTYN L+ C + ++ A
Sbjct: 501 DTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAV 560
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M R PD++T T +N L ++ + + F L+
Sbjct: 561 DLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF--------------LEELVVRL 606
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
K ++ + +++ M+G + P T T +IV+ K ++ +A++
Sbjct: 607 LKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%)
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ +I ALC+ A + + + +P Y LM+ LCK + + +A+LL DEM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
PS Y LI C G L+D M G +P+ LI+G C++ ++
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA +LL I + +Y + N + + + L G+ N +I
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 598 HSLWK 602
L+K
Sbjct: 370 SGLFK 374
>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
Length = 690
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 274/588 (46%), Gaps = 70/588 (11%)
Query: 65 ICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKP 124
I ++K+G+ +L D +L +E + VLL +S+ SAL +F W EI
Sbjct: 46 ISKAIKEGNFNLL----DSSVYGSNLQRNETNLVLLSLESEPNSALKYFRWA----EISG 97
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVE----------LVKDCPHSVDVFQDLISCTE 174
++ I H+L N F A K+ E++ ++D DV + L+ C
Sbjct: 98 KDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECC- 156
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
C + G++ ++ + F + +G S +LN L+ + +D ++++ R
Sbjct: 157 -CRY-----GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRG 210
Query: 235 GICP---NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF-------------------- 271
GI P + H F +L +FCK G+V K F + E GF
Sbjct: 211 GIEPSGVSAHGF-VLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIE 268
Query: 272 --------------DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
P++VT+ TLI+ +CK+G ++ AF L+++M +R + PDL+ Y+TL+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+G K G + H+LF + +H+G+ D+V +++ I Y K G + + + M+ GI
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ T I+++G ++GR+ A + ++ + G+ S Y LI C+ + +L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
E + + GY P + IY L++ L K + A+ +M+ ++I+ ++ + +LI +C
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---D 554
+ R EA+ + M G+ PD ++ ME + EAL FF + F++ D
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLE--EALFLFF-RMFKMGLEPD 565
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+Y + + F + + ++L R + + C +IH L+K
Sbjct: 566 ALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 210/459 (45%), Gaps = 42/459 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ R ++ GF+ IVSCN +L GL ++ I+ ++ + G PN TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR---- 299
L + FCK G++D+ + +E+ G +PDL+ Y+TLI Y K G L L+
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 300 ---------------------------IMYRR----NVLPDLVTYTTLMNGLCKEGKVRE 328
++Y+R + P++VTYT L+ GLC++G++ E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A ++ +++ RG+ P IV+Y++LI +CK G ++ +L +M+ G PD ++V
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G K+G +L A+ V++ + ++ +++ LI C+ NR A + +G G P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + +M + +AL L M ++P Y LI FC + + L
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D M + + D +C V+I+ + A + D +YN + +
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS- 648
Query: 569 GDLSKLMELQKRFLRLG---FAPNNLTCKYMIHSLWKGM 604
L +L E ++ F L F PN +T +IH L K M
Sbjct: 649 --LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKIM 685
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 173/353 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++ K F + L G + +V + ++ +K + VY+ M GI P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ IL C++G + + G +I + G +P +VTY++LI +CK G L F LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD+V Y L++GL K+G + A + +M+ + + ++V +N+LI +C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ + M GI PD T +++ EGRL AL L + + G+ Y
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI A C+ +P L + + ++ + + N ++ L KC + DA + +++
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
++P + TY +IC +C + R EA + + + + P++ +LI+ C
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 682
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 216/464 (46%), Gaps = 21/464 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + ++ +++ A + A+ C + K C + F L+ C
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVT--CFEIMKRKRCKPDLHTFLILVDC-------LC 200
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCN-FLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G+ ++F+ F + + +GF P + + ++ LLK + + +V+ +M + G P+
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDA 260
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N + K G + L+ + + P VTY L++S CK G L A L+R+
Sbjct: 261 IAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRV 320
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M P+ V YT+L++G K G+++EA LF MV G PD++++ +I CK G
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+++ EMM G P+ T I+QG K GR+ +A ++ + G Y
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ C+ R A LL+ + + P+L++Y+ L+ LC SV L D++ +++
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL---DDLFEQS 497
Query: 481 IKPSLSTYRALICC-----FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
K + T +CC C GR EA + M+ G PD+ +LING C ++
Sbjct: 498 -KAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Query: 536 --VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
V +A ALL K + D +Y + + G++ + +++
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKM 600
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 178/379 (46%), Gaps = 1/379 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GFQ + + N L+N L+ QC+ ++EEM + GI PNT +FNIL F + D
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLM 317
E ++ + PDL T+ L+ CK G AF ++ M V PD +T ++
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
L K +V+EA ++F +M G PD ++YNT+I K G QE+ +L M+
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P T I+V K G L A L + G + IY LI + R A SL
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + + GY P + + +++ LCK + A +EM+ KP++ TY +I
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
IGR A +M M+ G PDS L++G+C +++A LL K + +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472
Query: 558 YNAVFNMFAEDGDLSKLME 576
Y+++ N + G + K ++
Sbjct: 473 YSSLVNGLCDGGSVEKTLD 491
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 225/521 (43%), Gaps = 48/521 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y ++V+ L A ++ ++ P+SV ++ LI + K
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELF-RVMAASGFRPNSV-IYTSLIH-------GFAKS 343
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ F + ++ G++P +++ +++GL K +Q + +EEM R G PN T+
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ K G V ++ + G PD VTY L+ +CK GRL++A L + +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463
Query: 304 RNVLPDLVTYTTLMNGLC------------------------------------KEGKVR 327
+ P+L Y++L+NGLC K G++
Sbjct: 464 CSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLD 523
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCK--EGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA ++F RMV G PD +YN LI C+ E +++ + +LL+++ G PD T
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTP 583
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+ G K G + A+ ++ E G + Y L LC + A SL + + + G
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y ++ L K + DA DEM+ + KP+++TY AL+ C G EA
Sbjct: 644 GAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703
Query: 506 SLMDEMLESGMLPDS-QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ ML G L S I LI+G+C V+ A L + + + ++F+
Sbjct: 704 HRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDG 763
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
G K EL + G P+ T ++ L K E
Sbjct: 764 LVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 201/429 (46%), Gaps = 11/429 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K ++E+ + F + GF P ++ N +++GL K + +V + M P
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ IL + CK G +++ + GF P+ V Y +LI + K GR+ +A L+
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M PD++T+T +++GLCK G +A + F M+ G P++V+Y T+I K G+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + ++ M+ +G +PD+ T ++ G+ K GRL A L+ EL + S + +Y
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 421 LIVALCQDNRPFAAT--SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC D T L E+ + ++ LCK + +A + MV
Sbjct: 476 LVNGLC-DGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534
Query: 479 RNIKPSLSTYRALICCFCGIGRSGE-----AVSLMDEMLESGMLPDSQICRVLINGYCME 533
KP +TY LI C RS E A +L+ ++ + G LPD+ L G C
Sbjct: 535 EGCKPDATTYNILINGLC---RSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+V++A +L + + D +Y A+ G + + + L + +R G AP+
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651
Query: 594 KYMIHSLWK 602
+I+ L K
Sbjct: 652 CCIINGLIK 660
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 148/332 (44%), Gaps = 21/332 (6%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E K +TLD G C ++ GL K +D+ ++++ M G P+ T+NIL
Sbjct: 495 EQSKAAAETLDPGL------CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548
Query: 248 HVFCKNGD--VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ C++ + V++ L +E+ G+ PD VTY L CK G ++ A + R
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
D+V YT L GLC +G+V A LF MV +G +PD +Y +I K K++++
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD-------IY 418
EM+G G P T +VQ L A N+ RF ++R IY
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQA------LCHAGNVDEAFHRFESMLARGELVGSVMIY 722
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D LI C+ + AA L E + G VP+ L + L + A L EM
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
P +T+ A++ SG+ + L+ E
Sbjct: 783 GGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 3/297 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL--NCIDQCWQVYEEMGRIGICPN 239
K G + E+ + F++ + G +P + N L+NGL + N +++ + + ++ ++G P+
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPD 577
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK G+VD+ LE+ G++ D+V Y L + C +G+++ A L++
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R+ PD Y ++NGL K K+ +A + F M+ +G P + +Y L+ A C G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697
Query: 360 KMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ M+ G + ++ G+ K ++ +AL L ++ G +
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
L L + + A LL+ + G P + +++ L K D L L E
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 127/295 (43%), Gaps = 1/295 (0%)
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+ TY LMN L E + + + M+ G++P+ S+N LI ++ + + ++ +
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQ 427
M PD T I+V K G A + E+ G V R ++ ++ L +
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A + ++ + G+ P YN +++ L K +AL + D M+ + P+ T
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L+ C G A L M SG P+S I LI+G+ + +A +L
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D ++ + + + G+ + + + +R G PN +T +I L K
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 133/348 (38%), Gaps = 49/348 (14%)
Query: 265 KIEEEGFDPDLVTYNTLISSYC---KKGRLNDAFYLYRIMYRRNVLPDL--VTYTTLMNG 319
K E E PD V L++S K RL+ + + + RNVL + + +
Sbjct: 34 KPEREHLTPDFVRRADLVTSIVETIKDVRLDGSSW--SVHNIRNVLGPVHGQVLGSHVAA 91
Query: 320 LCKEGKVREAHQLFHRMV--HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ + KV F R G D+ +YN L+ E + ++ EM+ GI
Sbjct: 92 VLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA 151
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA--LCQDNRPFAAT 435
P+TF+ I+++ + + R A+ ++R D++ +LI+ LC+ A
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKR--KRCKPDLHTFLILVDCLCKAGMDEKAF 209
Query: 436 SLLERIGQDGYVP-SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + G+VP ++ ++ +L K V +A + +M P Y +I
Sbjct: 210 EVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG 269
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
G + EA+ ++D ML +P +L+N C + +AE L
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL------------ 317
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + A G F PN++ +IH K
Sbjct: 318 -------FRVMAASG----------------FRPNSVIYTSLIHGFAK 342
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/398 (29%), Positives = 186/398 (46%), Gaps = 11/398 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICP 238
Y G S + F + D G + S+ S N LLN L++ D +++ GI P
Sbjct: 128 YGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP 187
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T N+L CK D++ L++I G P+LVTY T++ Y +G + A +
Sbjct: 188 NIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVL 247
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R PD +TYT LM+G CK G+ EA + M + P+ V+Y +I A CKE
Sbjct: 248 EEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 307
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K E++++ EM+ PD+ C ++ ++ ++ A L ++ + +
Sbjct: 308 KKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 367
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ R A L + + G +PSL YN L+ +C+ + +A L D+M +
Sbjct: 368 STLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFE 426
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING---YCMEKD 535
R KP+ TY LI G E V +++EMLESG P+ +L G E+D
Sbjct: 427 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEED 486
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
K ++ K D ES+ N F G+L K
Sbjct: 487 AIKIVSMAVMNGK----VDKESWELFLNKFV--GELDK 518
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 165/343 (48%), Gaps = 10/343 (2%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-----VLPDLVTYTTLMNG 319
+I + G + + NTL++ + N F L M++ + + P++ T L+
Sbjct: 143 RIPDFGVKRSVRSLNTLLNVLIQ----NQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA 198
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ + A+++ + GL P++V+Y T++ Y G M+ +K +L EM+ G YPD
Sbjct: 199 LCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 258
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++ GY K GR A ++ ++++ + + Y +I ALC++ + A ++ +
Sbjct: 259 AITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 318
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++P + +++++LC+ V +A L +M+ N P + LI C G
Sbjct: 319 EMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 378
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA L DE + G +P LI G C + ++ +A L ++ + +YN
Sbjct: 379 RVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYN 437
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +++G++ + + + + L G PN T + L K
Sbjct: 438 VLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQK 480
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 201/428 (46%), Gaps = 17/428 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + ++ +++ A + A+ C + K C + F L+ C
Sbjct: 150 IAPNTFSFNILIRSFARTRRADDAVT--CFEIMKRKRCKPDLHTFLILVDC-------LC 200
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCN-FLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G+ ++F+ F + + +GF P + + ++ LLK + + +V+ +M + G P+
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDA 260
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N + K G + L+ + + P VTY L++S CK G L A L+R+
Sbjct: 261 IAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRV 320
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M P+ V YT+L++G K G+++EA LF MV G PD++++ +I CK G
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+++ EMM G P+ T I+QG K GR+ +A ++ + G Y
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA---DALLLKDEMV 477
L+ C+ R A LL+ + + P+L++Y+ L++ LC SV D L + +
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAA 500
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD-- 535
N+ P L ++I C GR EA + M+ G PD+ +LING C ++
Sbjct: 501 AENLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558
Query: 536 VNKAEALL 543
V +A ALL
Sbjct: 559 VERAFALL 566
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 203/432 (46%), Gaps = 15/432 (3%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K ++E+ + F + GF P ++ N +++GL K + +V + M P
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ IL + CK G +++ + GF P+ V Y +LI + K GR+ +A L+
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDE 355
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M PD++T+T +++GLCK G +A + F M+ G P++V+Y T+I K G+
Sbjct: 356 MVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGR 415
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ + ++ M+ +G +PD+ T ++ G+ K GRL A L+ EL + S + +Y
Sbjct: 416 VANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSS 475
Query: 421 LIVALCQDNRPFAAT--SLLE--RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
L+ LC D T L E + + P L ++ LCK + +A + M
Sbjct: 476 LVKGLC-DGGSVENTLDDLFEQSKAAAENLDPGL--CCSIIVGLCKTGRLDEACRIFQRM 532
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGE-----AVSLMDEMLESGMLPDSQICRVLINGYC 531
V KP +TY LI C RS E A +L+ ++ G LPD+ L G C
Sbjct: 533 VSEGCKPDATTYNILINGLC---RSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLC 589
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
+V++A +L + + D +Y A+ G + + + L + +R G AP+
Sbjct: 590 KIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAA 649
Query: 592 TCKYMIHSLWKG 603
+I+ L KG
Sbjct: 650 AYCCIINGLIKG 661
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 176/379 (46%), Gaps = 1/379 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GFQ + + N L+N L+ QC+ ++EEM + GI PNT +FNIL F + D
Sbjct: 113 AGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD 172
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLM 317
E ++ + PDL T+ L+ CK G AF ++ M V PD +T ++
Sbjct: 173 AVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
L K +V+EA ++F +M G PD ++YNT+I K G QE+ +L M+
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P T I+V K G L A L + G + IY LI + R A SL
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + + GY P + + +++ LCK + A +EM+ KP++ TY +I
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
IGR A +M M+ G PDS L++G+C +++A LL K + +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472
Query: 558 YNAVFNMFAEDGDLSKLME 576
Y+++ + G + ++
Sbjct: 473 YSSLVKGLCDGGSVENTLD 491
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 224/521 (42%), Gaps = 48/521 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT Y ++V+ L A ++ ++ P+SV ++ LI + K
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELF-RVMAASGFRPNSV-IYTSLIH-------GFAKS 343
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++E+ F + ++ G++P +++ +++GL K +Q + +EEM R G PN T+
Sbjct: 344 GRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTY 403
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ K G V ++ + G PD VTY L+ +CK GRL++A L + +
Sbjct: 404 TTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDK 463
Query: 304 RNVLPDLVTYTTLMNGLC------------------------------------KEGKVR 327
+ P+L Y++L+ GLC K G++
Sbjct: 464 CSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLD 523
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCK--EGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA ++F RMV G PD +YN LI C+ E +++ + +LL+++ G PD T
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTP 583
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
+ G K G + A+ ++ E G + Y L LC + A SL + + + G
Sbjct: 584 LCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQG 643
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y ++ L K + DA DEM+ + KP+++TY AL+ C G EA
Sbjct: 644 GAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAF 703
Query: 506 SLMDEMLESGMLPDS-QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ ML G L S I LI+G+C V+ A L + + + ++F+
Sbjct: 704 HRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDG 763
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
G K EL + G P+ T ++ L K E
Sbjct: 764 LVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDE 804
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 146/332 (43%), Gaps = 21/332 (6%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E K + LD G C ++ GL K +D+ ++++ M G P+ T+NIL
Sbjct: 495 EQSKAAAENLDPGL------CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548
Query: 248 HVFCKNGD--VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ C++ + V++ L +E G+ PD VTY L CK G ++ A + R
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
D+V YT L GLC +G+V A LF MV +G +PD +Y +I K K++++
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDAC 668
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD-------IY 418
EM+G G P T +VQ L A N+ RF ++R IY
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQA------LCHAGNVDEAFHRFEGMLARGELVGSVMIY 722
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D LI C+ + AA L E + G VP+ L + L + A L EM
Sbjct: 723 DALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
P +T+ A++ SG+ + L+ E
Sbjct: 783 GGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 139/297 (46%), Gaps = 3/297 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL--NCIDQCWQVYEEMGRIGICPN 239
K G + E+ + F++ + G +P + N L+NGL + N +++ + + ++ +G P+
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPD 577
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ L CK G+VD+ LE+ G++ D+V Y L + C +G+++ A L++
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M R+ PD Y ++NGL K K+ +A + F M+ +G P + +Y L+ A C G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697
Query: 360 KMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ M+ G + ++ G+ K ++ +AL L ++ G +
Sbjct: 698 NVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
L L + + A LL+ + G P + +++ L K D L L E
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 127/295 (43%), Gaps = 1/295 (0%)
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D+ TY LMN L E + + + M+ G++P+ S+N LI ++ + + ++ +
Sbjct: 118 DVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCF 177
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQ 427
M PD T I+V K G A + E+ G V R ++ ++ L +
Sbjct: 178 EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLK 237
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A + ++ + G+ P YN +++ L K +AL + D M+ + P+ T
Sbjct: 238 AKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVT 297
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y L+ C G A L M SG P+S I LI+G+ + +A +L
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D ++ + + + G+ + + + +R G PN +T +I L K
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 133/348 (38%), Gaps = 49/348 (14%)
Query: 265 KIEEEGFDPDLVTYNTLISSYC---KKGRLNDAFYLYRIMYRRNVLPDL--VTYTTLMNG 319
K E E PD V L++S K RL+ + + + RNVL + + +
Sbjct: 34 KPEREHLTPDFVRRADLVTSIVETIKDVRLDGSSW--SVHNIRNVLGPVHGQVLGSHVAA 91
Query: 320 LCKEGKVREAHQLFHRMV--HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ + KV F R G D+ +YN L+ E + ++ EM+ GI
Sbjct: 92 VLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIA 151
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA--LCQDNRPFAAT 435
P+TF+ I+++ + + R A+ ++R D++ +LI+ LC+ A
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKR--KRCKPDLHTFLILVDCLCKAGMDEKAF 209
Query: 436 SLLERIGQDGYVP-SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + G+VP ++ ++ +L K V +A + +M P Y +I
Sbjct: 210 EVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG 269
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
G + EA+ ++D ML +P +L+N C + +AE L
Sbjct: 270 LAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL------------ 317
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + A G F PN++ +IH K
Sbjct: 318 -------FRVMAASG----------------FRPNSVIYTSLIHGFAK 342
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 241/502 (48%), Gaps = 30/502 (5%)
Query: 108 SALTFFNWVKN--DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
+AL F WV+N + E+ S +I+ IL + S A +L L C DV
Sbjct: 145 TALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNL------CKDGFDV 198
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-IDQC 224
D+ + T A+ G RE+ F+K +VG +P++++ N +LN K+ ++
Sbjct: 199 --DVYAYTSMIT-AFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKM 255
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLIS 283
+ + M GI P+++T+N L C+ G++ ++ G L++++ GF PD VTYN L+
Sbjct: 256 VGLVDRMKSAGIAPDSYTYNTLISC-CRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLD 314
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
Y K R +A + + M P +VTY +L++ ++G + +A +L ++MV +G+ P
Sbjct: 315 VYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKP 374
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D+ +Y TL+ + K GK + + + EM G P+ T +++ +G G+ + +
Sbjct: 375 DVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVF 434
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+++ F S ++ L+ Q+ + + + + + G+VP + +N L+ S +C
Sbjct: 435 EDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRC 494
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
S A+ + M++ + P LS+Y A++ G ++ ++ EM + P+
Sbjct: 495 GSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTY 554
Query: 524 RVLINGYCMEKDVNKAEALL-----GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
L++ Y K++ + AL G + + T + DL LME +
Sbjct: 555 CSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKT------LVLVNSKCDL--LMETE 606
Query: 579 KRFLRL---GFAPNNLTCKYMI 597
+ FL L GF+P+ T M+
Sbjct: 607 RAFLELRQRGFSPDITTLNAMV 628
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/477 (23%), Positives = 213/477 (44%), Gaps = 44/477 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ + + + AM++L E+ CP S+ + LIS AY +
Sbjct: 304 PDKVTYNALLDVYGKSRRSKEAMEVLQEMEG--NGCPPSIVTYNSLIS-------AYARD 354
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ ++ + + ++ G +P + + LL+G K Q++EEM G PN TF
Sbjct: 355 GLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTF 414
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + G ++ E I+ PD+VT+NTL+S + + G ++ +++ M R
Sbjct: 415 NALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKR 474
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+P+ T+ TL++ + G +A ++ RM+ G++PD+ SYN ++ A + G ++
Sbjct: 475 AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGY--GKE-------------------GRLLSALNL 402
S+ +L EM P+ T ++ Y GKE LL L L
Sbjct: 535 SEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVL 594
Query: 403 V--------------VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
V +EL++ G S + ++ + A +L+ + + G+ P
Sbjct: 595 VNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTP 654
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
SL YN LM + + + + E++ + I+P + +Y +I +C GR +A ++
Sbjct: 655 SLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVL 714
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
EM ESG PD I Y + +A ++ + K + +YN++ + +
Sbjct: 715 SEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWY 771
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 149/324 (45%), Gaps = 11/324 (3%)
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
D F LIS +Y + G ++ +++ L+ G P + S N +L L + Q
Sbjct: 482 DTFNTLIS-------SYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534
Query: 224 CWQVYEEMGRIGIC-PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+V EM + G C PN T+ L H + +++++ E+I +P V TL+
Sbjct: 535 SEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLV 593
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
K L + + + +R PD+ T +++ + V +A+++ M G +
Sbjct: 594 LVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFT 653
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P + +YN+L++ Y + + S+ +L E++ GI PD + ++ Y + GR+ A +
Sbjct: 654 PSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRV 713
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E++ G + Y+ I + D+ A ++ + + G P+ YN +++ CK
Sbjct: 714 LSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCK 773
Query: 463 CDSVADALLLKDEMVDRNIKPSLS 486
+ +A + + + R + P +S
Sbjct: 774 LNRRDEASMFVNNL--RKLDPHIS 795
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 168/397 (42%), Gaps = 10/397 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
+A+ F ++N+ KP + ++ + KF+ MK+ ++ C + +
Sbjct: 394 AAVQIFEEMRNE-GCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTF--QCSPDIVTWN 450
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L+S + + G+ E F++ GF P + N L++ + DQ V
Sbjct: 451 TLLS-------VFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAV 503
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
Y+ M G+ P+ ++N + + G + L ++++ P+ +TY +L+ +Y
Sbjct: 504 YKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 563
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ L +Y + P V TL+ K + E + F + RG SPDI +
Sbjct: 564 GKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITT 623
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
N ++ Y + + ++ +L M G P T ++ Y + + ++ E+
Sbjct: 624 LNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREIL 683
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G+ Y+ +I A C++ R A+ +L + + G P + YN + S
Sbjct: 684 AKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFV 743
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+A+ + M+ KP+ STY +++ +C + R EA
Sbjct: 744 EAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEA 780
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ + E+ + G P+ T N + ++ + V K N L+ ++ GF P L TYN+L+ Y
Sbjct: 607 RAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMY 666
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
+ + + R + + + PD+++Y T++ C+ G++R+A ++ M G +PDI
Sbjct: 667 SRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDI 726
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++YNT I +Y + E+ ++ M+ +G P+ T IV Y K R A V
Sbjct: 727 ITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNN 786
Query: 406 LQRFGVSISRD 416
L++ IS D
Sbjct: 787 LRKLDPHISMD 797
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+I+ GK GR+ +A +L+ L + G + Y +I A + R A + +++ +
Sbjct: 170 VIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEV 229
Query: 445 GYVPSLEIYNELMESLCKCDSVADALL-LKDEMVDRNIKPSLSTYRALICCFCGIGR-SG 502
G P+L YN ++ K + ++ L D M I P TY LI C C G
Sbjct: 230 GCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISC-CRRGNLYE 288
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA ++ EM +G PD L++ Y + +A +L +YN++
Sbjct: 289 EAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLI 348
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ +A DG L +EL+ + + G P+ T ++ K + K
Sbjct: 349 SAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDK 393
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 200/456 (43%), Gaps = 37/456 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A++ G+ E+ + G PS+ + LL L + + W V+EEM G P
Sbjct: 158 AFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAARGPRP 217
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN + FC G V +G L + E G P++ +YN LI +C G DAF L+
Sbjct: 218 SLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLF 277
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+R P +VTY L++ LC EG++ EA +LF M G+ + +++N LI Y K
Sbjct: 278 EEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKT 337
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M ++ + EM G+ PD+ T II G K G A LV + FG + D
Sbjct: 338 GRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGH---AAQLVHDHDMFGSHMLADGM 394
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D L+ LC D R A LL + G S+ +N L+ + K +A L M
Sbjct: 395 DMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNK 454
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLM------------------------------ 508
+ PS ST+ LI C GR EA L+
Sbjct: 455 LGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCA 514
Query: 509 ----DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
D+M + G+ PD ING C VN+A + + + +YN++ +
Sbjct: 515 LKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISA 574
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G++++ ++LQ+ + G P+ T +I L
Sbjct: 575 LCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGL 610
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 192/449 (42%), Gaps = 33/449 (7%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+R + + G P++ S N L+ G ++++EEM R G P T+
Sbjct: 233 GLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTY 292
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL V C G + + +++ + G + +T+N LI Y K GR++ A YR M
Sbjct: 293 NILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKA 352
Query: 304 RNVLPDLVTYTTLMNG--------------------------------LCKEGKVREAHQ 331
R ++PD T+ + G LC + ++ +A +
Sbjct: 353 RGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWE 412
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L + +G + +N LI AY KEG +E+ L M G+ P + T ++ G
Sbjct: 413 LLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLC 472
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
+GRL A L+ + G +S + + A ++ A + +G+ G P
Sbjct: 473 NQGRLDEAQLLLEHMVSKGYCLSTS-FTICLDASFREGNAVCALKCWDDMGKLGLQPDFI 531
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
++ + LC+ D V +A EM R I P+ TY ++I C G EA+ L M
Sbjct: 532 AFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNM 591
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
++G++PD +LI+G C E + + LL DT +YN + N + D+
Sbjct: 592 RQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDM 651
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ M + L G P+ T +HSL
Sbjct: 652 NSAMNFMNKMLAAGCEPDIFTYNIWMHSL 680
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 192/443 (43%), Gaps = 38/443 (8%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + F + VG Q + ++ N L++G K +DQ Y EM G+ P++ TF
Sbjct: 303 GRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTF 362
Query: 244 NIL---------------------THVFCKNGD-----------VDKVNGFLEKIEEEGF 271
NI+ +H+ D +D L E+G
Sbjct: 363 NIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGA 422
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+ +N LI++Y K+G +AF LYRIM + + P T+ L+ GLC +G++ EA
Sbjct: 423 PLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQL 482
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L MV +G S+ + A +EG + +M G+ PD + G
Sbjct: 483 LLEHMVSKGYCLS-TSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLC 541
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
+ + A E+ G+ + Y+ +I ALC+ A L + + Q+G VP +
Sbjct: 542 RLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIY 601
Query: 452 IYNELMESLCKCD--SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
N L++ LC+ + D LLL +M + P TY +I +C A++ M+
Sbjct: 602 TSNILIDGLCREGKLEMVDNLLL--DMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMN 659
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+ML +G PD + ++ C +N+A +L D+ +YN + + D
Sbjct: 660 KMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSD- 718
Query: 570 DLSKLMELQKRFLRLGFAPNNLT 592
L + M L R +++ F PN +T
Sbjct: 719 VLDRAMILTGRLIKMAFQPNTIT 741
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 168/346 (48%), Gaps = 2/346 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++++ R ++ G S+ N L+ K ++ +++Y M ++G+ P++ TFN L
Sbjct: 409 DAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLI 468
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C G +D+ LE + +G+ ++ + + ++G A + M + +
Sbjct: 469 MGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDASFREGNAVCALKCWDDMGKLGLQ 527
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD + ++ +NGLC+ V EA+Q F M RG+ P+ +YN++I A C+ G M E+ L
Sbjct: 528 PDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKL 587
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M NG+ PD +T I++ G +EG+L NL++++ G++ Y+ +I A C+
Sbjct: 588 QQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCR 647
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+A + + ++ G P + YN M SLC + A + DE+V P T
Sbjct: 648 AKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVT 707
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
Y L+ C A+ L +++ P++ V ++ +C +
Sbjct: 708 YNTLMDGICS-DVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQ 752
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++ + E+++ F + G P+ + N +++ L + + + ++ + M + G+ P+ +
Sbjct: 542 RLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIY 601
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T NIL C+ G ++ V+ L + G PD VTYNT+I++YC+ +N A M
Sbjct: 602 TSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKM 661
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
PD+ TY M+ LC + +A ++ +V G PD V+YNTL+ C + +
Sbjct: 662 LAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSD-VL 720
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV---SISRDIY 418
+ L ++ P+T T + + + K+G AL +L+ +R+I
Sbjct: 721 DRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLREDSFVFDDATRNII 780
Query: 419 DYLIVALCQDNRPFAATSLLER 440
D+ L D P A +ER
Sbjct: 781 DWARRELEDD--PHANNEDIER 800
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%)
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ + + G AL+++ ++R G + S L+ L + AA ++ E +
Sbjct: 153 RLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAA 212
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PSL +N ++ C V A L M + I P++ +Y LI C G S +
Sbjct: 213 RGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRD 272
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L +EM SG P +L++ C E + +A L A+ +T ++N + +
Sbjct: 273 AFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLID 332
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+A+ G + + + G P++ T + +K
Sbjct: 333 GYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYK 371
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY + + + K L G +P I + N ++ L + ++Q +V +E+ +G P
Sbjct: 644 AYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPP 703
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
++ T+N L C + +D+ ++ + F P+ +T N +S +CK+G
Sbjct: 704 DSVTYNTLMDGICSD-VLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQG 753
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 181/371 (48%), Gaps = 3/371 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + FR+ ++G +P++++ ++ GL K + Q +++ EEM G PN +T
Sbjct: 251 GFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTH 310
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G +K FL+ + E P+++TY +IS YC+ ++N A L M
Sbjct: 311 TALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMK 370
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P+ TYTTL++G CK G A++L + M G SP++ +YN ++ CK+G++Q
Sbjct: 371 EQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQ 430
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ +L NG+ D T I++ + K+ + AL L ++ + G+ Y LI
Sbjct: 431 EAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLI 490
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++ R + E + G VP+ + Y ++ C+ ++ AL M D
Sbjct: 491 AVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCA 550
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV-LINGYCMEKDVNKAEA 541
TY ALI C + EA L D M+E G+ P ++ RV L YC D A
Sbjct: 551 SDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP-CEVTRVTLAYEYCKIDDGCSAMV 609
Query: 542 LLGFFAKKFQI 552
+L KK +
Sbjct: 610 VLERLEKKLWV 620
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 245/507 (48%), Gaps = 31/507 (6%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
L + S+ AL+FFNW + + + Y L N F A +++ +V+
Sbjct: 86 LASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCMVK----- 140
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
++ ++G ++E+ + + + G PS + N+++ + ++
Sbjct: 141 -------------------SFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMG 181
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
++ +++EM G+ PN ++ ++ +CK G+V + + +L + E GF D T +
Sbjct: 182 LVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLS 241
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
++ +C+KG + A + +R + P+L+ +T ++ GLCK G V++A ++ MV R
Sbjct: 242 LIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR 301
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLS 398
G P++ ++ LI CK+G +++ L +++ + + P+ T ++ GY ++ ++
Sbjct: 302 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNR 361
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A L+ ++ G++ + + Y LI C+ A L+ + ++G+ P++ YN +++
Sbjct: 362 AEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVD 421
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LCK V +A + + TY LI C +A+ L ++M++SG+ P
Sbjct: 422 GLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQP 481
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFF--AKKFQIYDT-ESYNAVFNMFAEDGDLSKLM 575
D LI +C EK + ++E FF A +F + T ++Y ++ + +G+L +
Sbjct: 482 DIHSYTTLIAVFCREKRMKESEM---FFEEAVRFGLVPTNKTYTSMICGYCREGNLRLAL 538
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ R G A +++T +I L K
Sbjct: 539 KFFHRMSDHGCASDSITYGALISGLCK 565
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 173/350 (49%), Gaps = 8/350 (2%)
Query: 182 KVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G ++F+ F K + +P++++ +++G + +++ + M G+ PNT
Sbjct: 319 KKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNT 378
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L CK G+ ++ + + EEGF P++ TYN ++ CKKGR+ +A+ + +
Sbjct: 379 NTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKS 438
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+R + D VTYT L++ CK+ ++++A LF++MV G+ PDI SY TLI +C+E +
Sbjct: 439 GFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKR 498
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+ES+ E + G+ P T ++ GY +EG L AL + G + Y
Sbjct: 499 MKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGA 558
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ ++ A L + + + G P L CK D A+++ + +
Sbjct: 559 LISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERL---E 615
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
K + T L+ C + G A ++L+ D + RV I +
Sbjct: 616 KKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDK----DPNVNRVTIAAF 661
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 224/491 (45%), Gaps = 22/491 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y +V L + K A CE+V +K D F T CN V
Sbjct: 77 MAPDVVTYTSVVDGLCRDGKMDRA----CEMVREMKLKGVEPDKFTFSALITGWCNARKV 132
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI---GICP 238
E+ K +++ L + VS + L+ GL + I + +++++EM P
Sbjct: 133 D-----EALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L FCK+G+++K L +E P++VTY++L+ CK G L+ A L+
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M + +P++VTYTTL++GLC KV A L M D VSYN L+ YC+
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++E+K L EM PD T +V+G+ RL A ++E + I D+
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPDVV 366
Query: 419 DYLIV--ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y IV + R A ++ + P+ Y+ L++ LCK V A+ E+
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM----EV 422
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ KP + TY +I CG R+ EA++L++EM+ + P +I C D+
Sbjct: 423 LKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDM 482
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS---KLMELQKRFLRLGFAPNNLTC 593
++A LL A +Y + F+ G + +L E+ +R + + NL
Sbjct: 483 DEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVP 542
Query: 594 KYMIHSLWKGM 604
+ +L +G+
Sbjct: 543 EQAFSALIRGL 553
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 191/408 (46%), Gaps = 8/408 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTHTFNILTHVFCKNGDVDKVN 260
P+ + N ++NGL K + ++V +EM R G + P+ T++ + + FCK G++D+
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65
Query: 261 GFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L E + +G PD+VTY +++ C+ G+++ A + R M + V PD T++ L+ G
Sbjct: 66 EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL--YEMMGNGIY 377
C KV EA +L+ ++ D VS + LI C+E ++ E+ L EM +G +
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185
Query: 378 -PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD T ++ G+ K G L A+ ++ ++ + Y L+ LC+ A
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L R+ G VP++ Y L+ LC V A LL DEM +Y AL+ +C
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI-YDT 555
+GR EA L EM LPD L+ G+C + +A LL I D
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+Y+ V ++ + E + + APN +T +I L K
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKA 413
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 218/511 (42%), Gaps = 52/511 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P Y ++V+ L ++ + E++K+ V DL++ + N +
Sbjct: 5 VAPNERTYNVVVNGLC-------KARLTSKAYEVLKEMRDGKSVAPDLVTYSTVIN-GFC 56
Query: 182 KVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + + + R+ + G P +V+ +++GL + +D+ ++ EM G+ P+
Sbjct: 57 KQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDK 116
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR- 299
TF+ L +C VD+ ++I D V+ + LI+ C++ R+ +A+ L++
Sbjct: 117 FTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQE 176
Query: 300 -------------------------------------IMYRRNVLPDLVTYTTLMNGLCK 322
+M R +P++VTY++L++GLCK
Sbjct: 177 MEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 236
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + +A LF RM +G P++V+Y TLI C K+ ++ L+ EM DT +
Sbjct: 237 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVS 296
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI- 441
++ GY + GR+ A L E+ R Y L+ C +R A LLE +
Sbjct: 297 YNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 356
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G P + Y+ ++ + +A EM+ RN+ P+ TY +LI C GR
Sbjct: 357 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 416
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A+ E+L++ PD ++I G C +A LL K ++N+V
Sbjct: 417 NHAM----EVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSV 472
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
GD+ + +L G P +T
Sbjct: 473 IGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 503
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 40/303 (13%)
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RGLSPDIVSYNTLIFAYCKEGKM 361
R V P+ TY ++NGLCK +A+++ M + ++PD+V+Y+T+I +CK+G+M
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61
Query: 362 QESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ +L EM+ +G+ PD T +V G ++G++ A +V E++ GV + +
Sbjct: 62 DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C + A L++Y E++ S C+ D+V+ +
Sbjct: 122 LITGWCNARKVDEA---------------LKLYKEILTSSCRLDAVSSS----------- 155
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMD--EMLESGML-PDSQICRVLINGYCMEKDVN 537
ALI C R GEA L EM E G PD LI+G+C ++
Sbjct: 156 ---------ALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLE 206
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA +LG + + + +Y+++ + + GDL + ++L +R G PN +T +I
Sbjct: 207 KAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI 266
Query: 598 HSL 600
H L
Sbjct: 267 HGL 269
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 57/269 (21%)
Query: 116 VKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTED 175
+K I P Y ++V + +F A + + E++ ++ + + LI
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI--ARNVAPNAVTYSSLID---- 408
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
K G + + + K +D +P +V+ ++ GL + ++ + EEM
Sbjct: 409 ---GLCKAGRVNHAMEVL-KNVD---KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR 461
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ P+ TFN + C+ GD+D+ L + G +P +VTY TL+ + + GR+ A+
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521
Query: 296 YLYRIMYRR--------NVLPDLVTYTTLMNGLCKE------------------------ 323
L+ +M R+ N++P+ ++ L+ GLCK
Sbjct: 522 ELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 580
Query: 324 -----------GKVREAHQLFHRMVHRGL 341
G+ EA +L + + GL
Sbjct: 581 CLAIVDGLLRAGRTEEAGKLINSISKVGL 609
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/564 (25%), Positives = 264/564 (46%), Gaps = 66/564 (11%)
Query: 89 HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKM 148
+L +E + VLL +S+ SAL +F W EI ++ I H+L N F A K+
Sbjct: 66 NLQRNETNLVLLSLESEPNSALKYFRWA----EISGKDPSFYTIAHVLIRNGMFDVADKV 121
Query: 149 LCELVE----------LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD 198
E++ ++D DV + L+ C C + G++ ++ + F +
Sbjct: 122 FDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECC--CRY-----GMVDKALEIFVYSTQ 174
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP---NTHTFNILTHVFCKNGD 255
+G S +LN L+ + +D ++++ R GI P + H F +L +FCK G+
Sbjct: 175 LGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGF-VLDALFCK-GE 232
Query: 256 VDKVNGFLEKIEEEGF----------------------------------DPDLVTYNTL 281
V K F + E GF P++VT+ TL
Sbjct: 233 VTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +CK+G ++ AF L+++M +R + PDL+ Y+TL++G K G + H+LF + +H+G+
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
D+V +++ I Y K G + + + M+ GI P+ T I+++G ++GR+ A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ ++ + G+ S Y LI C+ + +L E + + GY P + IY L++ L
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + A+ +M+ ++I+ ++ + +LI +C + R EA+ + M G+ PD
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVFNMFAEDGDLSKLMELQ 578
++ ME + EAL FF + F++ D +Y + + F + + ++L
Sbjct: 533 TFTTVMRVSIMEGRLE--EALFLFF-RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
R + + C +IH L+K
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFK 613
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 204/424 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++ K F + L G + +V + ++ +K + VY+ M GI P
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ IL C++G + + G +I + G +P +VTY++LI +CK G L F LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD+V Y L++GL K+G + A + +M+ + + ++V +N+LI +C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ + M GI PD T +++ EGRL AL L + + G+ Y
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI A C+ +P L + + ++ + + N ++ L KC + DA + +++
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++P + TY +IC +C + R EA + + + + P++ +LI+ C D++
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A + A+K + +Y + + F++ D+ +L + G +P+ ++ +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 599 SLWK 602
L K
Sbjct: 750 GLCK 753
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 208/457 (45%), Gaps = 42/457 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ R ++ GF+ IVSCN +L GL ++ I+ ++ + G PN TF
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTF 289
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY------------------ 285
L + FCK G++D+ + +E+ G +PDL+ Y+TLI Y
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349
Query: 286 -----------------CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
K G L A +Y+ M + + P++VTYT L+ GLC++G++ E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A ++ +++ RG+ P IV+Y++LI +CK G ++ +L +M+ G PD ++V
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G K+G +L A+ V++ + ++ +++ LI C+ NR A + +G G P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + +M + +AL L M ++P Y LI FC + + L
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
D M + + D +C V+I+ + A + D +YN + +
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS- 648
Query: 569 GDLSKLMELQKRFLRLG---FAPNNLTCKYMIHSLWK 602
L +L E ++ F L F PN +T +IH L K
Sbjct: 649 --LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 172/383 (44%), Gaps = 35/383 (9%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+F + + L G +PSIV+ + L++G K + + +YE+M ++G P+ +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+L K G + F K+ + ++V +N+LI +C+ R ++A ++R+M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ T+TT+M EG++ EA LF RM GL PD ++Y TLI A+CK K
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQ----------------------------------- 388
L M N I D C +++
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY RL A + L+ + LI LC++N A + + + G P
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ Y LM+ K + + L +EM ++ I PS+ +Y +I C GR EA ++
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 509 DEMLESGMLPDSQICRVLINGYC 531
+ +++ +LPD +LI GYC
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYC 787
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL+ + + K L + ++V N L++G +LN D+ +V+ MG GI P+
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF + V G +++ ++ + G +PD + Y TLI ++CK + L+ +M
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + D+ +++ L K ++ +A + F+ ++ + PDIV+YNT+I YC ++
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ + + P+T T I++ K + A+ + + G + Y L
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ + + L E + + G PS+ Y+ +++ LCK V +A + + +D +
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 772
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P + Y LI +C +GR EA L + ML +G+ PD + R L
Sbjct: 773 LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
FF K LE P + YC ++ + K + +++ D + D+
Sbjct: 554 FFRMFKMGLE--PDALAYCTLIDAFCKHMKPTIGLQLF--------DLMQRNKISADIAV 603
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
C + + K I ++ K F ++ +P IV+ N ++ G L +D+ +++E +
Sbjct: 604 CNVVIHLLF-KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
PNT T IL HV CKN D+D + E+G P+ VTY L+ + K +
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI 722
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+F L+ M + + P +V+Y+ +++GLCK G+V EA +FH+ + L PD+V+Y L
Sbjct: 723 EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAIL 782
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPD 379
I YCK G++ E+ L M+ NG+ PD
Sbjct: 783 IRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 4/227 (1%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
I CN +++ L K + I+ + + + + P+ T+N + +C +D+ E
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ F P+ VT LI CK ++ A ++ IM + P+ VTY LM+ K
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ + +LF M +G+SP IVSY+ +I CK G++ E+ ++ ++ + + PD
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
I+++GY K GRL+ A L + R GV D L AL + N P
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSEYNPP 823
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 205/425 (48%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
++ G +E+ + +R+ + G +PS+ + + L+ K I + EEM +G+ PN
Sbjct: 205 LQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNI 264
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ I V ++G +D+ +++++++G PD+VTY LI + C +L+DA L+
Sbjct: 265 YTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTK 324
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + PD VTY TL++ G + + +++ M G +PD+V++ L+ A CK G+
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ LL M G+ P+ T ++ G + RL AL+L ++ GV + Y
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI + P A E++ G P++ N + SL + + +A + +E+
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P TY ++ C+ +G+ EA+ L+ EM + PD + LI+ V +A
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +YN + ++G + K ++L + G +PN +T ++ L
Sbjct: 565 QMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624
Query: 601 WKGME 605
K E
Sbjct: 625 CKNDE 629
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 172/339 (50%), Gaps = 2/339 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + R F F K L G +P++ N L++G L+++ ++ W ++EEM G P+T
Sbjct: 769 KTSVARNVFVKFTKEL--GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF 826
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L K+G ++++ +++ G P+ +TYN +IS+ K RL+ A LY +
Sbjct: 827 TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P T+ L++GL K G++ +AH++F MVH G P+ YN L+ Y K G +
Sbjct: 887 VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ M+ GI PD + I+V GR+ AL+ +L++ G+ Y+ +
Sbjct: 947 DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I L + R A SL + G VP L YN L+ +L + +A + +E+ +
Sbjct: 1007 INGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGL 1066
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
KP++ TY ALI + G S A + +M+ G P++
Sbjct: 1067 KPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNT 1105
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 198/419 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +R++ K + GF + S N L++ LL+ + +VY M G+ P+ TF
Sbjct: 173 GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTF 232
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L K ++ V G LE++E G P++ TY I + G++++A+ + + M
Sbjct: 233 SALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD 292
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
PD+VTYT L++ LC K+ +A LF +M PD V+Y TL+ + G + +
Sbjct: 293 DGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDK 352
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + EM +G PD T I+V K GR+ A +L+ +++ GV + Y+ LI
Sbjct: 353 VEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLIS 412
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
L + NR A L + G P+ Y L++ K AL ++M R I P
Sbjct: 413 GLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP 472
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ A + +GR GEA ++ +E+ SG+ PDS +++ Y V++A LL
Sbjct: 473 NIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLL 532
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K D N++ + + G + + ++ R + AP +T ++ L K
Sbjct: 533 SEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGK 591
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 219/458 (47%), Gaps = 25/458 (5%)
Query: 162 SVDVFQDLISC-TEDCNWAYV-------KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
++D+F ++ S E + Y+ K G ++ +TF K G P+IV+CN L
Sbjct: 423 ALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY 482
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
L ++ + + ++ E+ G+ P++ T+N++ + K G VD+ L ++ + +P
Sbjct: 483 SLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D++ N+LI + K GR+ +A+ ++ M N+ P +VTY L+ GL KEG++++A QLF
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M G SP+ +++NTL+ CK ++ + + Y+M PD T I+ G+ K+
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE---RIGQD-----G 445
++ +A+ L ++++ + D V LC + +E RI +D G
Sbjct: 663 NQIKNAIWLFHQMKKL---LRPD-----HVTLCTLLPGVIKSGQIEDAFRITEDFFYQVG 714
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
+ ++M + A+L + +V R I S +I C ++ A
Sbjct: 715 SNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVAR 774
Query: 506 SLMDEML-ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++ + E G+ P ++ +LI+G+ +V A L DT +YN++ +
Sbjct: 775 NVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDA 834
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G +++L +L L G PN +T +I +L K
Sbjct: 835 HGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 199/418 (47%), Gaps = 19/418 (4%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I E+++ ++ D G P +V+ L++ L +D ++ +M P+ T+
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L F G +DKV ++E +G+ PD+VT+ L+++ CK GR+N+AF L M +
Sbjct: 338 VTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRK 397
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ VLP+L TY TL++GL + ++ +A LF M G+ P +Y LI + K G +
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK 457
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +M GI P+ C + + GRL A + EL+ G++ Y+ ++
Sbjct: 458 ALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMK 517
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ + A LL + + P + + N L+++L K V +A + M + N+ P
Sbjct: 518 CYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAP 577
Query: 484 SLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++ TY L+ G+G+ G+ AV L + M G P++ L++ C +V+ A
Sbjct: 578 TVVTYNILL---AGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLA- 633
Query: 541 ALLGFFAKKFQIY---DTESYNAVFNMFAEDGDLSK---LMELQKRFLRLGFAPNNLT 592
L F K + D ++N + + F + + L K+ LR P+++T
Sbjct: 634 --LKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLR----PDHVT 685
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 151/315 (47%), Gaps = 3/315 (0%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
+G+ P +N+L F + +V+ E+++ G PD TYN+LI ++ K G++N+
Sbjct: 784 LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
F LY M R P+ +TY +++ L K ++ +A L++ +V SP ++ LI
Sbjct: 844 LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
K G++ ++ + M+ G P++ I+V GYGK G + +A + + G+
Sbjct: 904 GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
Y L+ LC R A E++ Q G P L YN ++ L + +AL L
Sbjct: 964 DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM +R I P L TY +LI +G EA + +E+ G+ P+ LI GY +
Sbjct: 1024 HEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLS 1083
Query: 534 KDVNKAEALLGFFAK 548
+ +E G + K
Sbjct: 1084 GN---SELAYGIYKK 1095
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 192/444 (43%), Gaps = 39/444 (8%)
Query: 199 VGFQPSIV----SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
VG P++V +CN +L L ++ V++ M R I N T+ I+ G
Sbjct: 114 VGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRG 173
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY------------ 302
+ + LEK+ E GF + +YN LI + G +A +YR M
Sbjct: 174 GLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFS 233
Query: 303 --------RRNV---------------LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
RRN+ P++ TYT + L ++GK+ EA+++ RM
Sbjct: 234 ALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD 293
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G PD+V+Y LI A C K+ ++ L +M + PD T ++ + G L
Sbjct: 294 GCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKV 353
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+ E++ G + + L+ ALC+ R A LL+ + + G +P+L YN L+
Sbjct: 354 EKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISG 413
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
L + + + DAL L M ++P+ TY LI G G+A+ ++M G+ P+
Sbjct: 414 LLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
C + + +A+A+ D+ +YN + +++ G + + ++L
Sbjct: 474 IVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLS 533
Query: 580 RFLRLGFAPNNLTCKYMIHSLWKG 603
++ P+ + +I +L+K
Sbjct: 534 EMSKVQCEPDVIVINSLIDTLYKA 557
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 10/362 (2%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
I +VL + + SV+ F + K +L +KPT Y L++ + A + E+
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTK-ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKS 818
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
C + LI A+ K G I E F + + L G +P+ ++ N +++
Sbjct: 819 --AGCAPDTFTYNSLID-------AHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISN 869
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L+K N +D+ +Y + P TF L K+G +D + + + G P+
Sbjct: 870 LVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPN 929
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
YN L++ Y K G ++ A ++ M + + PDL +YT L++ LC G+V +A F
Sbjct: 930 SAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFE 989
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
++ GL PD+V+YN +I + + +E+ SL +EM GI PD +T ++ G G
Sbjct: 990 KLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVG 1049
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ A + ELQ G+ + Y+ LI A + +++ G P+ +
Sbjct: 1050 MIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFA 1109
Query: 455 EL 456
+L
Sbjct: 1110 QL 1111
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 165/362 (45%), Gaps = 2/362 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G I E+F G P++ + N L++GLL+ N +D ++ M +G+ P
Sbjct: 378 ALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEP 437
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T+ +L K+G K EK++ G P++V N + S + GRL +A ++
Sbjct: 438 TAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD VTY +M K G+V EA +L M PD++ N+LI K
Sbjct: 498 NELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKA 557
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+++E+ + M + P T I++ G GKEG++ A+ L + G S + +
Sbjct: 558 GRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ LC+++ A + ++ P + +N ++ K + + +A+ L +M
Sbjct: 618 NTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-K 676
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML-ESGMLPDSQICRVLINGYCMEKDVN 537
+ ++P T L+ G+ +A + ++ + G D ++ G E
Sbjct: 677 KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTE 736
Query: 538 KA 539
KA
Sbjct: 737 KA 738
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 201/478 (42%), Gaps = 12/478 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + + ++ L N++ A+KM ++ + +C V F +I ++K
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTM--NCRPDVLTFNTIIH-------GFIKQ 662
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNTHT 242
I+ + F + + +P V+ LL G++K I+ +++ E+ ++G +
Sbjct: 663 NQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RIM 301
+ + +K F E++ D +I CK + + A ++ +
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFT 781
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P L Y L++G + V A LF M G +PD +YN+LI A+ K GK+
Sbjct: 782 KELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKI 841
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E L EM+ G P+T T +++ K RL A++L L S + + L
Sbjct: 842 NELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPL 901
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I L + R A + + + G P+ IYN L+ K V A MV I
Sbjct: 902 IDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGI 961
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P L +Y L+ C GR +A+ +++ ++G+ PD ++ING + +A +
Sbjct: 962 RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L + + D +YN++ G + + ++ + +G PN T +I
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRG 1079
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + ++ F K G P +V+ N ++NGL + ++ ++ EM GI P+ +T
Sbjct: 978 AGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L G +++ E+++ G P++ TYN LI Y G A+ +Y+ M
Sbjct: 1038 YNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMM 1097
Query: 303 RRNVLPDLVTYTTLMN 318
P+ T+ L N
Sbjct: 1098 VGGCDPNTGTFAQLPN 1113
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 179/361 (49%), Gaps = 3/361 (0%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+G++ ++ + N LL L + + D+ V++EM P+ TF IL C++ ++K
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L +++E G PD YN LIS Y K AF M + + LP +VTYT +++
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GLCK + R+A +L M +G SP+I +YN ++ C+E K+ E+K +L EM G +P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++G K R+ A L R V+ Y +I LC+ +A+ +L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRML 237
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + G P + Y+ L++ CK V A+ L D M+ +P++ Y +L+ +
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G G+A ++ EM G PD I+G C + V KA+A+ ++ + SY
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 559 N 559
+
Sbjct: 358 S 358
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 222/472 (47%), Gaps = 25/472 (5%)
Query: 152 LVELVKDCPH--SVDVFQDLI--SCTEDC-NWAYVKVGLIRES-FKTFRKTL----DVGF 201
L++L ++ H + VFQ++I SC D +A + GL R + + RK L ++G
Sbjct: 14 LLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGC 73
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
P N L++G K Q ++ EM + P T+ + CK
Sbjct: 74 VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVK 133
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L+++ ++G P++ TYN ++ C++ +L++A + M R PD+VTY + + GLC
Sbjct: 134 LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLC 193
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K +V EA + RM ++PD+VSY T+I CK G + + +L M G PD
Sbjct: 194 KCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVV 250
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ G+ K G + A+ L+ + + G + Y+ L+ AL + A +L +
Sbjct: 251 TYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEM 310
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC-------- 493
+ G+ P + YN ++ LCK + V A + D MV+R P+ S+Y LI
Sbjct: 311 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVL 370
Query: 494 --CFCGIGRSGEAVSLMDEMLESGML-PDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
C GR EA +L ++L+ + PD V+++ +C + ++KA + +K
Sbjct: 371 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK- 429
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ ++N + + D LS + + GF P+ +T ++ ++ K
Sbjct: 430 NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 481
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 197/410 (48%), Gaps = 26/410 (6%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +IV L K A KML E+ V+ V + I C+
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMA--VRGYFPDVVTYNSFIKGLCKCDRV---- 198
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ + F + V P +VS ++NGL K +D ++ + M G P+ T+
Sbjct: 199 ----DEARKFLARMPV--TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTY 252
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L FCK G+V++ G L+ + + G P++V YN+L+ + + G + A + M R
Sbjct: 253 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP----------DIVSYNTLIF 353
R PD+V+Y ++GLCK +V++A +F RMV RG +P DI+ Y L+
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372
Query: 354 AYCKEGKMQESKSLLYEMMGNGI-YPDTFTCQIIVQGYGKEGRLLSALNLVVE-LQRFGV 411
CK G+ E+ +L +++ I PD F +++ + K ++ AL + + L++
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC 432
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
++ ++ L+ LC D+R A ++L + +G++P Y L++++CKC A AL
Sbjct: 433 NVV--TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
L +E V P + TY ALI + EA L +++E +PD +
Sbjct: 491 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDK 540
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G ++ +YN L+ +E + ++ ++ EM+ PD FT I+++G + +L A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L+ ++ G IY+ LI + A L + ++ +P++ Y +++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LCK + DA+ L DEM D+ P++ TY ++ C + EA +++EM G PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
I G C V++A F A+ D SY V N + GDL +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARK---FLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 580 RFLRLGFAPNNLTCKYMIHSLWKGME 605
G P+ +T +I KG E
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGE 264
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY ++ YN+L+ L + A + EM+D++ +P T+ L+ C + +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L+ M E G +PD I LI+GY KD +A L K + +Y + +
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ ++L G +PN T ++ L + ERK
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE--ERKL 163
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 202/446 (45%), Gaps = 7/446 (1%)
Query: 171 SCTED---CNW---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
CT D CN A + G + E + RK G +P IVS N +L GL D
Sbjct: 173 GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
++ EM R+G PN TFN L C+NG ++V+ L ++ E G PDL Y T+I
Sbjct: 233 EELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDG 292
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK G A + M + P++V Y T++ GLC + EA L M D
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 352
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V++N L+ +C+ G + LL +M+ +G PD T ++ G+ KEG + A+ L+
Sbjct: 353 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 412
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ G + Y ++ LC+ R A L+ + Q G +P+ +N L+ +CK
Sbjct: 413 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 472
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
V A+ L +M+ P L +Y +I G++ EA+ L++ M+ G+ P++ I
Sbjct: 473 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 532
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+ + E +K + D YNAV + + + + ++ +
Sbjct: 533 SMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN 592
Query: 585 GFAPNNLTCKYMIHSLW-KGMERKFQ 609
G PN T +I L +G+ R+ Q
Sbjct: 593 GCMPNESTYTILIRGLASEGLVREAQ 618
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 177/393 (45%), Gaps = 66/393 (16%)
Query: 152 LVELVK-DCPHSVDVFQDLIS----------------------CTEDCN-WAYVKVGLIR 187
+VE+V+ CP +V F LI+ CT D +A + G+ +
Sbjct: 236 MVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICK 295
Query: 188 ESFK-----TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP-NTH 241
+ + G +P++V N +L GL ++ + EM + CP +
Sbjct: 296 DGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED-CPLDDV 354
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL---- 297
TFNIL FC+NG VD+V LE++ E G PD++TY T+I+ +CK+G +++A L
Sbjct: 355 TFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM 414
Query: 298 -----------YRI--------------------MYRRNVLPDLVTYTTLMNGLCKEGKV 326
Y I M ++ LP+ VT+ TL+N +CK+G V
Sbjct: 415 SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLV 474
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +L +M+ G SPD++SY+T+I K GK +E+ LL M+ GI P+T +
Sbjct: 475 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSM 534
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+EGR + + +Q V +Y+ +I +LC+ A + +G
Sbjct: 535 ASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGC 594
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+P+ Y L+ L V +A L E+ R
Sbjct: 595 MPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 173/383 (45%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I V +EM G +++ C+ G L+ + +G D N
Sbjct: 124 IADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNL 183
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++S+ C++G +++ L R + PD+V+Y ++ GLC + + +L MV G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
P++ ++NTLI C+ G ++ L +M +G PD I+ G K+G A
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
+++ + +G+ + Y+ ++ LC R A LL + Q+ +N L++
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C+ V + L ++M++ P + TY +I FC G EAV L+ M G P++
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 423
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+++ G C + A+ L+ ++ + + ++N + N + G + + +EL K+
Sbjct: 424 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQ 483
Query: 581 FLRLGFAPNNLTCKYMIHSLWKG 603
L G +P+ ++ +I L K
Sbjct: 484 MLVNGCSPDLISYSTVIDGLGKA 506
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 4/409 (0%)
Query: 195 KTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
+ LD G +V+ N ++ G + Q + + PN +T+ + C
Sbjct: 65 RALDTAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAAVPVPPNAYTYFPIVRSLCAR 121
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + L+++ G + ++ + C+ G A ++++ + D
Sbjct: 122 GLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNC 181
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+++ +C++G V E +L ++ G PDIVSYN ++ C + + + L+ EM+
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G P+ T ++ + G + ++ G + +Y +I +C+D
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A +L R+ G P++ YN +++ LC + +A L EM + T+ L+
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
FC G + L+++MLE G +PD +ING+C E V++A LL +
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+T SY V EL ++ G PN +T +I+ + K
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 470
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 9/217 (4%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP + +Y +++ L ++ A +++ +++ + C + F LI+ K
Sbjct: 420 KPNTISYTIVLKGLCRAERWVDAQELISHMIQ--QGCLPNPVTFNTLIN-------FMCK 470
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
GL+ ++ + ++ L G P ++S + +++GL K ++ ++ M GI PNT
Sbjct: 471 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 530
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ + + G DK+ + I++ D YN +ISS CK+ + A + M
Sbjct: 531 YSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMV 590
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+P+ TYT L+ GL EG VREA L + R
Sbjct: 591 SNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 135/356 (37%), Gaps = 70/356 (19%)
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK------------- 360
+ L+ LC G+ +A + G + +V+YN +I YC+ G+
Sbjct: 48 SALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPV 104
Query: 361 -------------------MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+ ++ ++L EM G C +I++ + G SA+
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ L G ++ + ++ A+C+ LL ++ G P + YN +++ LC
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
D L EMV P+++T+ LI C G + + +M E G PD +
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284
Query: 522 ICRVLINGYCMEKDVNKAEALLG--------------------------------FFAKK 549
+ +I+G C + A +L A+
Sbjct: 285 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344
Query: 550 FQ---IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
FQ D ++N + + F ++G + +++EL ++ L G P+ +T +I+ K
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCK 400
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 206/445 (46%), Gaps = 27/445 (6%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR L FF+WV N ++ L++ L + A L + + C
Sbjct: 78 LRLIKVPADGLRFFDWVYNK-GFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEKRSNGC 136
Query: 160 PHSVD-VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
D F LI +Y GL +ES F+ +G PS+++ N LL+ LLK
Sbjct: 137 VKLQDRYFNSLIR-------SYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKR 189
Query: 219 NCIDQCWQVYEEMGRI-GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+++EM R G+ P+++TFN L FCKN VD+ +++E +PD+VT
Sbjct: 190 GRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVT 249
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
YNT+I C+ G++ A L M ++ V P++V+YTTL+ G C + ++ EA +FH
Sbjct: 250 YNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHE 309
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY----PDTFTCQIIVQGYG 391
M+ RGL P+ V+YNTLI + + E K L +G + PD T I+++ +
Sbjct: 310 MLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFL---IGGDAFTTFSPDACTFNILIKAHC 366
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER-------IGQD 444
G L +A+ + E+ + Y LI LC N A +L +G++
Sbjct: 367 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKN 426
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
P YN + E LC A + +++ R + S+YR LI C G+ A
Sbjct: 427 ECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDP-SSYRTLITGLCREGKFKAA 485
Query: 505 VSLMDEMLESGMLPDSQICRVLING 529
L+ ML +PD + VLI+G
Sbjct: 486 YELLVLMLRREFVPDPETYEVLIDG 510
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 192/394 (48%), Gaps = 17/394 (4%)
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE-GFDPDLVTYNTLISSY 285
+++ M ++GI P+ TFN L + K G + +++ G PD T+NTLIS +
Sbjct: 163 LFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGF 222
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS--P 343
CK ++ AF +++ M + PD+VTY T+++GLC+ GKV+ AH L + M+ + + P
Sbjct: 223 CKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHP 282
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
+IVSY TL+ YC + ++ E+ + +EM+ G+ P+ T +++G + R +
Sbjct: 283 NIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFL 342
Query: 404 VELQRFGVSISRD--IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ F + S D ++ LI A C AA + + + P Y+ L+ +LC
Sbjct: 343 IGGDAF-TTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLC 401
Query: 462 ------KCDSVADALLLKDEMVDRN-IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
K +++ + L K+ ++ +N KP + Y + C G++ +A + ++++
Sbjct: 402 LRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKR 461
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G D R LI G C E A LL ++ + D E+Y + + + G+
Sbjct: 462 GA-QDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLA 520
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ +R LR + P T ++ L K RKF
Sbjct: 521 HDTLQRMLRSSYLPVATTFHSVLAELVK---RKF 551
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 167/384 (43%), Gaps = 25/384 (6%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G+ + F R+T G P + N L++G K + +DQ + +++EM P+
Sbjct: 191 RTGMAHDMFDEMRRT--YGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVV 248
Query: 242 TFNILTHVFCKNGDV----DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
T+N + C+ G V + +NG L+K P++V+Y TL+ YC K +++A +
Sbjct: 249 TYNTIIDGLCRAGKVKIAHNLLNGMLKK--ATAVHPNIVSYTTLLRGYCMKQEIDEALLV 306
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ-LFHRMVHRGLSPDIVSYNTLIFAYC 356
+ M R + P+ VTY TL+ GL + + E L SPD ++N LI A+C
Sbjct: 307 FHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHC 366
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
G + + + EM+ ++PD+ + ++++ A L EL V + ++
Sbjct: 367 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKN 426
Query: 417 -------IYDYLIVALCQDNRPFAA----TSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
Y+ + LC + + A L++R QD PS Y L+ LC+
Sbjct: 427 ECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQD---PS--SYRTLITGLCREGK 481
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
A L M+ R P TY LI IG + A + ML S LP +
Sbjct: 482 FKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHS 541
Query: 526 LINGYCMEKDVNKAEALLGFFAKK 549
++ K N + LL +K
Sbjct: 542 VLAELVKRKFANDSFGLLTVMLEK 565
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 15/321 (4%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
+N+LI SY G ++ L++ M + + P ++T+ +L++ L K G+ AH +F M
Sbjct: 144 FNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMR 203
Query: 338 HR-GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G++PD ++NTLI +CK + ++ ++ EM PD T I+ G + G++
Sbjct: 204 RTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKV 263
Query: 397 LSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
A NL+ + + ++ +I Y L+ C A + + G P+ YN
Sbjct: 264 KIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYN 323
Query: 455 ELMESLCKC---DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
L++ L + D + L+ D P T+ LI C G A+ + EM
Sbjct: 324 TLIKGLSEAHRYDEIKGFLIGGDAFT--TFSPDACTFNILIKAHCDAGHLDAAMKVFQEM 381
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKKFQIYDTE------SYNAVFNM 564
L + PDS VLI C+ + +KAE L F K+ + E +YN +F
Sbjct: 382 LNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEY 441
Query: 565 FAEDGDLSKLMELQKRFLRLG 585
+G + ++ ++ ++ G
Sbjct: 442 LCANGKAKQAEKVFRQLMKRG 462
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 199/489 (40%), Gaps = 81/489 (16%)
Query: 48 LYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLK---PLLPHLGAHEISRVLLR--C 102
LY+ P+ N I+D +C + K +H LL LK + P++ ++ LLR C
Sbjct: 240 LYSCNPDVVTYNTIIDGLCRAGKVKIAH-NLLNGMLKKATAVHPNIVSYT---TLLRGYC 295
Query: 103 QSDSV--SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
+ + L F + L KP + Y ++ L+ +++ L P
Sbjct: 296 MKQEIDEALLVFHEMLTRGL--KPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSP 353
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ F LI A+ G + + K F++ L++ P S + L+ L N
Sbjct: 354 DAC-TFNILIK-------AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNE 405
Query: 221 IDQCWQVYEEM-------GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF-D 272
D+ ++ E+ G+ P +N++ C NG + ++ + G D
Sbjct: 406 FDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQD 465
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
P +Y TLI+ C++G+ A+ L +M RR +PD TY L++GL K G+ AH
Sbjct: 466 PS--SYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDT 523
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
RM+ P ++++++ K +S LL M+
Sbjct: 524 LQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVML-------------------- 563
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E R+ ++L + R S ++ +LIV L DN GY+ +E
Sbjct: 564 EKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDN---------------GYLIKME- 607
Query: 453 YNELMESLCKCDSVADALLL------KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
EL++ LC+ + DA L K +MVD + T +I C R EA S
Sbjct: 608 --ELLDFLCENRKLLDAHTLVLFCLEKSQMVD------IDTCNTIIEGLCKHKRHSEAFS 659
Query: 507 LMDEMLESG 515
L +E++E G
Sbjct: 660 LYNELVELG 668
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 214/424 (50%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G ++E+ + + G S + N +L+ + + ++ ++ EM + G+ P+
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+F ++ C G V + +L + E GF D T +I ++C+KG +N +
Sbjct: 224 CVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFW 283
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + P+++ +T L+NGLCK+G +++A +L MV RG P++ ++ TLI CK+G
Sbjct: 284 KMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKG 343
Query: 360 KMQESKSLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ L +++ +G P+ T ++ GY KE +L A L+ +Q G+ + + Y
Sbjct: 344 WTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY 403
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L++ +G++G+ P++ YN +++ LCK S+ +A L +++
Sbjct: 404 TTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ TY L+ C + ++ ++ML+ G PD LI+ +C +K + +
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKE 523
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+E L I ++Y ++ + G+ S ++L +R G AP+++T +I
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALIS 583
Query: 599 SLWK 602
L K
Sbjct: 584 GLCK 587
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 172/361 (47%), Gaps = 1/361 (0%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G + E+ K ++ GF +C +++ + +++ + +M +G+ PN
Sbjct: 237 MGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVIN 296
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F L + CK G + + LE++ G+ P++ T+ TLI CKKG AF L+ +
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356
Query: 303 RRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P++ TYT ++NG CKE K+ A L RM +GL P+ +Y TLI +CK G
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ L+ M G P+ +T I+ G K+G L A L+ ++ G+ Y L
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C+ + ++ + G+ P + Y L+ C+ + ++ L +E V +
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGL 536
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ TY ++IC +C G + AV L M G PDS LI+G C E ++ A
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596
Query: 542 L 542
L
Sbjct: 597 L 597
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 168/331 (50%), Gaps = 1/331 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-GICPNT 240
K G I+++F+ + + G++P++ + L++GL K ++ ++++ ++ R G PN
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
HT+ + + +CK +++ L +++E+G P+ TY TLI +CK G A+ L +
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDL 425
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + P++ TY +++GLCK+G + EA++L +++ GL D V+Y L+ +C++
Sbjct: 426 MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQAD 485
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
S +M+ G PD + ++ + ++ ++ + L E G+ ++ Y
Sbjct: 486 TNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTS 545
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I C+ A L +R+ G P Y L+ LCK + DA L D M+D+
Sbjct: 546 MICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ P T L +C S A++++D +
Sbjct: 606 LSPCEVTRLTLAYEYCKKDDSSTAINVLDRL 636
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 207/461 (44%), Gaps = 35/461 (7%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
CQ V+ + + W ++ + P N+ +++ L A ++L E+V +
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVR--RGWKP 327
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNC 220
+V LI K G ++F+ F K + G++P++ + ++NG K +
Sbjct: 328 NVYTHTTLID-------GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+++ + M G+ PNT+T+ L CK G+ + ++ + +EGF P++ TYN
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNA 440
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+I CKKG L++A+ L + + D VTYT LM+ C++ + F++M+ G
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+PDI SY TLI +C++ +M+ES+ L E + G+ P T ++ GY + G A+
Sbjct: 501 FTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L + G + Y LI LC++++ A +L + + G P L
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEY 620
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK D + A+ + D + R + T L+ C G+ A ++L+
Sbjct: 621 CKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLLDK------ 671
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
E +VN+ LLGF K Y++ Y V
Sbjct: 672 ------------EPNVNRV-TLLGFMNK---CYESNKYGLV 696
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 149/313 (47%), Gaps = 1/313 (0%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++ ++ + G+L +A + M + ++ T +++ G V A +F M RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+SPD VS+ ++ A C G++ E++ L M+ G D TC +I+ + ++G + +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ G++ + + LI LC+ A LLE + + G+ P++ + L++ L
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339
Query: 461 CKCDSVADALLLKDEMVDRN-IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
CK A L ++V + KP++ TY A+I +C + A L+ M E G++P+
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ LI+G+C + +A L+ K+ + +YNA+ + + G L + L
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459
Query: 580 RFLRLGFAPNNLT 592
+ G + +T
Sbjct: 460 KVSVHGLQADGVT 472
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 118/290 (40%), Gaps = 71/290 (24%)
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFG--------------------VSISRDI------ 417
Q +V + + G+L A+N+VVE+Q G V I+ ++
Sbjct: 158 QCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQ 217
Query: 418 ---------YDYLIVALCQDNRPFAA-------------------TSLLERIGQDGYV-- 447
+ ++VA C R A T +++ Q GYV
Sbjct: 218 RGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNR 277
Query: 448 --------------PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
P++ + L+ LCK S+ A L +EMV R KP++ T+ LI
Sbjct: 278 VVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLID 337
Query: 494 CFCGIGRSGEAVSLMDEMLES-GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C G + +A L +++ S G P+ +INGYC E +N+AE LL ++ +
Sbjct: 338 GLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV 397
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+T +Y + + + G+ + EL + GF+PN T +I L K
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCK 447
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 25/292 (8%)
Query: 51 FLPETQNPNKIVDLICSSLKKG--DSHLTLLQNDLKPLLPHLGAHEISRVLL---RC-QS 104
F P N I+D +C KKG D LL K + L A ++ +L C Q+
Sbjct: 431 FSPNIYTYNAIIDGLC---KKGSLDEAYRLLN---KVSVHGLQADGVTYTILMSVHCRQA 484
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D+ +L FFN + + P +Y ++ + + ++ E V L +
Sbjct: 485 DTNRSLVFFNKMLK-VGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSL--GLIPTKK 541
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
+ +I Y + G + K F++ + G P ++ L++GL K + +D
Sbjct: 542 TYTSMIC-------GYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDA 594
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+Y+ M G+ P T L + +CK D L+++E+ + + T NTL+
Sbjct: 595 RNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRK 651
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
C +G+L+ A + + + + VT MN + K +L R+
Sbjct: 652 LCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSERI 703
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 449 SLEIYNELME----SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
+LE NE+M+ + + + +A+ + EM ++ + S T ++ G+G A
Sbjct: 149 NLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIA 208
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++ EM + G+ PD ++++ C V +AE L ++ I D + + +
Sbjct: 209 ENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDA 268
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + G +++++ + + +G APN + +I+ L K
Sbjct: 269 FCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 208/465 (44%), Gaps = 37/465 (7%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G + E+ K F D+G P+ N L++G K + Q +YEEM G+ P
Sbjct: 326 ALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSP 385
Query: 239 NTHTFNILT-----------------------------------HVFCKNGDVDKVNGFL 263
+ TFNIL C G +D+ L
Sbjct: 386 DCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLL 445
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+++ E+G +V +N+LI +Y + G + AF YRIM R P T +L+ GLC++
Sbjct: 446 QELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRK 505
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G ++EA L +RM+ +G + V+Y L+ Y K ++ ++ L EM GIYPD
Sbjct: 506 GWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAF 565
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K G + A + +E+ G + Y+ LI LC R A L + + Q
Sbjct: 566 TALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQ 625
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G + +N +++ C+ + A+ +M + P + T+ LI +C
Sbjct: 626 KGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVG 685
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A ++++M G+ PD ++GYC + +N+A +L + DT +YN + +
Sbjct: 686 AGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLS 745
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI-HSLWKGMERK 607
D L + M L + L++GF PN +T ++ H +GM K
Sbjct: 746 GICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEK 789
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 204/422 (48%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ VG+ E+ + R VG +P + S LL LL++ W+++++M G P
Sbjct: 186 GFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRP 245
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN + FC+ V L + + PD+VT+N LI++ C GR A
Sbjct: 246 SNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWL 305
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M R V P + T+TT+++ LC+EG V EA +LF + G++P+ YNTL+ Y K
Sbjct: 306 HLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKA 365
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ L EM G+ PD T I+V G+ K GR+ + L+ +L G+ + +Y
Sbjct: 366 REVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLY 425
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D ++ +LC R A LL+ + + G S+ +N L+ + + A MV
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
PS ST +L+ C G EA L+ MLE G + VL++GY ++
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ L ++ D ++ A+ + ++ G++ + E+ +GF PNN +I
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605
Query: 599 SL 600
L
Sbjct: 606 GL 607
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 179/362 (49%), Gaps = 5/362 (1%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
WA G + E+ K ++ L+ G S+V+ N L+ + D+ ++ Y M R G
Sbjct: 434 WA----GRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFT 489
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P++ T N L C+ G + + L ++ E+GF + V Y L+ Y K L A +L
Sbjct: 490 PSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFL 549
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ M R + PD V +T L++GL K G V EA+++F M G P+ +YN+LI C
Sbjct: 550 WKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCD 609
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G++ E+ L EM G+ DTFT II+ G+ + G++ A+ +++QR G+
Sbjct: 610 CGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFT 669
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ LI C+ A ++ ++ G P + YN M C+ + A+++ D+++
Sbjct: 670 FNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLI 729
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
I P TY ++ C A+ L ++L+ G +P+ +L++ +C +
Sbjct: 730 SAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPE 788
Query: 538 KA 539
KA
Sbjct: 789 KA 790
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y ++ + ++ + + G P V+ N +L+G+ + +D+ + ++ ++G P
Sbjct: 711 GYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIP 769
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T N+L FCK G +K + +K+ E F D ++Y L +YC + D L
Sbjct: 770 NVITTNMLLSHFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC---LMQDDVELV 826
Query: 299 RIMYRRNVLPDLVTYTTL 316
R Y +++ D + Y T
Sbjct: 827 RGTYEKHLFMDFLMYITF 844
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 207/439 (47%), Gaps = 40/439 (9%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K G +E+ F+ ++ G QPS+ + LLN L + + + P++
Sbjct: 83 IKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDS 142
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
FN L + F ++G+++ ++K++E G P TYNTLI Y G+ +++ L +
Sbjct: 143 IFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDL 202
Query: 301 MYRR-NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M NV P+L TY L+ LCK + EA + ++M G+ PD+V++NT+ AY + G
Sbjct: 203 MSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNG 262
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS------- 412
K ++++++ EM N + P+ TC II+ GY +EG++ AL V ++ G+
Sbjct: 263 KTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLN 322
Query: 413 ---------ISRDIYDYLIVALCQ-DNRPFAAT--SLLERIGQDGYVPS-LEIYNELMES 459
+ RD D ++ + + RP T +++ Q G++ EIYN +++S
Sbjct: 323 SLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKS 382
Query: 460 LCKCDSVADALLLKDE---------------MVDRNIKPSLSTYRALICCFCGIGRSGEA 504
K D+ A ++L K M + P++ + +I +C +GR A
Sbjct: 383 GVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNA 442
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ + D+M E G+ P+ + LI GY K KAE +L + + + + +
Sbjct: 443 MRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEE----FHVQPKKSTILL 498
Query: 565 FAEDGDLSKLMELQKRFLR 583
AE + E K LR
Sbjct: 499 VAEAWRFAGFKERAKTLLR 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 186/419 (44%), Gaps = 19/419 (4%)
Query: 195 KTLDVGFQPSIVSC------------NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
K + G QPS C ++N L+K + +++ + G P+ T
Sbjct: 50 KATNSGSQPSCTFCMGKNDCQIVRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLAT 109
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ L + ++ + +EE+ PD + +N LI+++ + G + DA + + M
Sbjct: 110 YTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMK 169
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKM 361
+ P TY TL+ G GK E+ +L M G + P++ +YN LI A CK +
Sbjct: 170 ESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENI 229
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ +++Y+M +G+ PD T I Y + G+ A +++E+QR + + +
Sbjct: 230 SEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTII 289
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC---DSVADALLLKDEMVD 478
I C++ + A + R+ G P+L + N L+ D V + L L +E
Sbjct: 290 ISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEF-- 347
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
I+P + TY ++ + G + + + ML+SG+ PD+ +L GY +++ K
Sbjct: 348 -QIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEK 406
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
AE +L K + + V + + G + M + + G +PN T + +I
Sbjct: 407 AEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLI 465
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 203/451 (45%), Gaps = 12/451 (2%)
Query: 94 EISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
++ +L++ + + F N ++ + P+ + Y +++ L K+ + + LV
Sbjct: 77 KVMNILIKSGKPQEAIVIFQNLIEGGHQ--PSLATYTTLLNALT-TQKYFKPIHSIVSLV 133
Query: 154 ELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLN 213
E + P S+ F LI+ A+ + G + ++ K +K + G +PS + N L+
Sbjct: 134 EEKQMKPDSI-FFNALIN-------AFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIK 185
Query: 214 GLLKLNCIDQCWQVYEEMGRIG-ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
G D+ ++ + M G + PN T+N+L CK ++ + + K+ G
Sbjct: 186 GYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQ 245
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+VT+NT+ ++Y + G+ A + M R ++ P+ T T +++G C+EGKV+EA +
Sbjct: 246 PDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRF 305
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+RM G+ P+++ N+L+ + +L M I PD T I+ + +
Sbjct: 306 VYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQ 365
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G L + + + GV Y L + A +L + + G P++ I
Sbjct: 366 AGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVI 425
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+ ++ C + +A+ + D+M + + P+L T+ LI + + +A ++ M
Sbjct: 426 FTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIME 485
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
E + P ++ + +A+ LL
Sbjct: 486 EFHVQPKKSTILLVAEAWRFAGFKERAKTLL 516
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 160/347 (46%), Gaps = 34/347 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G ++E+ + + D+G QP+++ N L+NG + + D +V + M I P
Sbjct: 292 GYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRP 351
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T++ + + + + G ++K + + G PD Y+ L Y + + A +
Sbjct: 352 DVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEML 411
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M + V P++V +TT+++G C G++ A ++F +M G+SP++ ++ TLI+ Y +
Sbjct: 412 TVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEA 471
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
+ +++ +L M + P T ++ + + G A L+ ++ + SI +D
Sbjct: 472 KQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLLRTVKAKMANSIGKD- 530
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGY----------VPSLEIYNELMESLCKCDSVA 467
DN+P + E+I Q + +PS+ ++ +L S
Sbjct: 531 ----------DNKP---AKMSEKIYQKPHTNAPFCSLLQIPSISSTDQKGSALT---SRR 574
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+ LL+D V+ + L+T C I R GE S+M + +
Sbjct: 575 NRRLLRDGAVETLL---LTTK---FKCHPQICRYGEGFSIMGKQFQG 615
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 181/363 (49%), Gaps = 3/363 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + F + +D+ +P ++ L K+N +D +E M + G P+ T+ +L
Sbjct: 105 KALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLV 164
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H K ++ + E++ +G P+LVTY T+++ YCK GR++ A L R +
Sbjct: 165 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 224
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P Y+TL++GLCK + EA +LF + G D++ Y + I CK GK+ E+K++
Sbjct: 225 PSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAV 282
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G PD + +I+ K+ R+ A L+ + + L+ LC+
Sbjct: 283 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 342
Query: 428 DNRPFAATSLLERIGQDG-YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
R A +LER+ + G PS+ Y+ +++ LCK D + DA ++ +M P +
Sbjct: 343 SRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVV 402
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY A+I FC +GR EA L M E G D +LI GYC V++A A++
Sbjct: 403 TYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEM 462
Query: 547 AKK 549
A +
Sbjct: 463 AGR 465
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 186/404 (46%), Gaps = 3/404 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GFQ + +CN LL + C + ++V+++ P+ T+ L FCK + +
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L +++ G P +VT+ +LI C+ + A ++ M V PD YT ++
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK K+ A F RMV G PD V+Y L+ + K K ++ + EM+ G P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +V GY K GR+ AL+L+ L+ G S S +Y LI LC+ +R A L E
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE 251
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
D V + +Y + LCK + +A + +M++ P +Y +I C
Sbjct: 252 MAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFAKKFQIYDTESY 558
R EA LMD+ +E +P +C VL++G C + V +A +L + +Y
Sbjct: 310 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTY 369
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+AV + + L + ++ R G P+ +T +I + K
Sbjct: 370 SAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCK 413
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 202/457 (44%), Gaps = 34/457 (7%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+V G RE+++ F+ L F+P + L+ G K I Q + EM GI P
Sbjct: 27 FVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPT 86
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TF L C+ DK ++ + PD Y +I CK +L+ A +
Sbjct: 87 IVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFE 146
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + LPD VTYT L++ L K K + HQ+F M+ +G SP++V+Y T++ YCK G
Sbjct: 147 RMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAG 206
Query: 360 KMQESKSLLYEMMGNGIYP---------------------------------DTFTCQII 386
++ ++ SL+ + G G P D
Sbjct: 207 RIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGDVQDVIVYTSF 266
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G K G+L A + V++ G + Y+ +I +LC+DNR A L+++ +
Sbjct: 267 ISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKC 326
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK-PSLSTYRALICCFCGIGRSGEAV 505
+P + + L++ LCK V +A ++ + M++ + PS+ TY A+I C R +A
Sbjct: 327 MPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAY 386
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++ +M +G +PD +I+ +C +++A L ++ D +YN + +
Sbjct: 387 VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY 446
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + + + G PN ++ ++ L K
Sbjct: 447 CRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCK 483
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 179/352 (50%), Gaps = 3/352 (0%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + + G P V+ L++ L K +Q Q++EEM G P T+ + + +CK
Sbjct: 145 FERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCK 204
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G +D+ + +++ G P Y+TLI CK R ++A L+ + + D++
Sbjct: 205 AGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAA--GDVQDVIV 262
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT+ ++GLCK GK+ EA + +M+ G +PD VSYN +I++ CK+ ++ E+K L+ + M
Sbjct: 263 YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAM 322
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG-VSISRDIYDYLIVALCQDNRP 431
P C ++V G K R+ A ++ + G + S Y +I LC+ +R
Sbjct: 323 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRL 382
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A +L+++ + G VP + Y ++++ CK + +A L M +R + Y L
Sbjct: 383 DDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNIL 442
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
I +C + EA+++++EM G+ P+ +++G C E V +A L+
Sbjct: 443 IRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLM 494
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 13/287 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ S Y ++ L +++ A EL E+ V V+ IS K
Sbjct: 225 PSGSLYSTLIDGLCKHDRHDEAR----ELFEMAAGDVQDVIVYTSFIS-------GLCKA 273
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ K ++ G P VS N ++ L K N + + ++ ++ P
Sbjct: 274 GKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVC 333
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEG-FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+L CK+ V++ LE++ E G P +VTY+ +I CK RL+DA+ + + M
Sbjct: 334 TVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMR 393
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R +PD+VTYT +++ CK G++ EA +LF RM RG + D+V+YN LI YC+ K+
Sbjct: 394 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVD 453
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
E+ +++ EM G GI P+ + IV G KE R+ A L++E F
Sbjct: 454 EAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA-RLLMEKMNF 499
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 171/395 (43%), Gaps = 65/395 (16%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE-------------- 154
AL F+ + D+++KP + Y +++ L NK A +V+
Sbjct: 106 ALQIFHQMI-DMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLV 164
Query: 155 --LVKDCP--HSVDVFQDLIS---CTEDCNWA-----YVKVGLIRESFKTFRKTLDVGFQ 202
L K C +F++++S E +A Y K G I ++ R+ G
Sbjct: 165 HSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRS 224
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS + L++GL K + D+ +++E G + + CK G +D+
Sbjct: 225 PSGSLYSTLIDGLCKHDRHDEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAV 282
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA---------------------------- 294
K+ E G PD V+YN +I S CK R+++A
Sbjct: 283 HVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCK 342
Query: 295 --------FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
L R++ + P +VTY+ +++GLCK ++ +A+ + +M G PD+V
Sbjct: 343 SRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVV 402
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+Y +I A+CK G++ E++ L M G D I+++GY + ++ A+ ++ E+
Sbjct: 403 TYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEM 462
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
G+ + ++ LC+++R A L+E++
Sbjct: 463 AGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 209/423 (49%), Gaps = 15/423 (3%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + + L P +V+ L++GL K +++EM GI PN ++I+
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C+ + K+ G + DL+TYN L++ +CK G L+DAF L +++ + +
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++ Y L+NGL + + EAH + +M+ + PD++ Y +I +EG++ E+ +LL
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ PDT +++G+ G L A +L +E+ + + Y LI +C++
Sbjct: 362 GEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKN 421
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL--- 485
A + + + + G +PS+ +N L+ LCK + + +A LL +M + KPSL
Sbjct: 422 GLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM-EIVRKPSLFLR 480
Query: 486 -----------STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
++ + ++ C G +A L+ ++++SG+LPD + +LING+C
Sbjct: 481 LSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFG 540
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++N A L K + D+ +Y + + G +E+ ++ ++ G P + T K
Sbjct: 541 NINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYK 600
Query: 595 YMI 597
++
Sbjct: 601 TIM 603
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 221/481 (45%), Gaps = 28/481 (5%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D + KP + LI+H L F A+ + ++++ C + DV I C
Sbjct: 156 DFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLK----CNLNPDVVTYGILIHGLCKT 211
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ L+ F + D G P+ + + +L+GL + I +++ +M G
Sbjct: 212 CKTQDALV-----LFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNR 266
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N+L + FCK+G +D L+ + ++G ++ Y LI+ + R +A Y
Sbjct: 267 DLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWY 326
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M R N+ PD++ YT ++ GL +EG+V EA L M RGL PD + YN LI +C
Sbjct: 327 QKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDM 386
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E++SL E+ + +P+ T I++ G K G + A ++ E+++ G S +
Sbjct: 387 GYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446
Query: 419 DYLIVALCQDNRPFAAT------------SLLERIGQDG----YVPSLEIYNELMESLCK 462
+ LI LC+ NR A SL R+ Q + SL++ +ME LC+
Sbjct: 447 NSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQV---MMERLCE 503
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ A L ++VD + P + TY LI FC G A L EM G +PDS
Sbjct: 504 SGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVT 563
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI+G A + KK + ++ +Y + + ++S + + ++L
Sbjct: 564 YGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYL 623
Query: 583 R 583
R
Sbjct: 624 R 624
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 184/396 (46%), Gaps = 6/396 (1%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F+ F + P + S LL+GL K+ Q + +Y +M GI P+ T NIL
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ C V + + I G+ PD+VTY TLI C + R++ A L+ M +
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG------LSPDIVSYNTLIFAYCKEGKM 361
P+ +TY TLM GLC+ G + A +L M++ P ++SY+ +I A CK+ +
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E++ L EM G+ P + ++ G+ G+ A L E+ GV + ++ L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC++ + A LLE + Q G VP+L YN L+E C + A L M +
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + Y LI +C + EA+ L + ML+ G PD + L+ G V A+
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
L G D Y N ++G L + MEL
Sbjct: 439 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 474
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 177/351 (50%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+ F+P ++S + +++ L K D+ ++EEM G+ P ++ L H FC G ++
Sbjct: 236 INFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEE 295
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ +G P++VT+N LI CK+G++ +A L +M +R ++P+L+TY +L+
Sbjct: 296 AKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIE 355
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G C G + A +LF M +G PD++ Y LI YCK K++E+ L M+ G P
Sbjct: 356 GFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRP 415
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T ++ G + G++ A L ++ +G+ IY + LC++ F A L
Sbjct: 416 DVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELF 475
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ +E +N L++ LCK + A L +++ ++P + TY +I FC
Sbjct: 476 NKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRG 535
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
G+ +A L +M ++G PD LI G+ K + K LL ++
Sbjct: 536 GQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 163/325 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+++S L++G ++ +++ EM G+ PN TFN+L V CK G V +
Sbjct: 272 GMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEA 331
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
LE + + G P+L+TYN+LI +C G LN A L+ M + PD++ YT L+NG
Sbjct: 332 KDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLING 391
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK KV EA +L++ M+ G PD+ +Y L+ + GK+ ++K L M GI D
Sbjct: 392 YCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGD 451
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ I + G K G L A+ L +L+ + + + + ++ LI LC+ + A L E
Sbjct: 452 LYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFE 511
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ Q+ P + YN ++ C+ V A +L +M P TY LI F
Sbjct: 512 KLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESK 571
Query: 500 RSGEAVSLMDEMLESGMLPDSQICR 524
+ + V L+ M++ + D I R
Sbjct: 572 KLEKVVELLHMMVQRDVSLDVNILR 596
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 235/520 (45%), Gaps = 21/520 (4%)
Query: 93 HEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTS--SNYCLIVHILAWNNKFS--FAMKM 148
++S L C++ +++A F + + PT S++ ++ LA +S F +
Sbjct: 61 QQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYN 120
Query: 149 LCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
L + DC L++C CN V + E L G+ P IV+
Sbjct: 121 QMRLSGISPDCC----TLNILLNCL--CN-----VNRVGEGLAVMAGILRRGYIPDIVTY 169
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L+ GL + I + ++ M ++G PN T+ L C+ G++ +++
Sbjct: 170 TTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLN 229
Query: 269 EG------FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ F P +++Y+ +I + CK R ++A L+ M + + P +++YT+L++G C
Sbjct: 230 DSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCC 289
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK EA +LF+ MV++G+ P++V++N LI CKEGK+ E+K LL M+ GI P+ T
Sbjct: 290 GGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLT 349
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+++G+ G L SA L V + G Y LI C+ ++ A L +
Sbjct: 350 YNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGML 409
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
Q G P ++ Y L+ L + V DA L M I L Y + C G
Sbjct: 410 QVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF 469
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA+ L +++ + D + LI+G C + A L ++ D +YN +
Sbjct: 470 EAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMI 529
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F G + K L ++ + G P+ +T +I ++
Sbjct: 530 HEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFE 569
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 183/391 (46%), Gaps = 6/391 (1%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR------IGICPNTHTFNIL 246
F + +G P+ ++ L+ GL + I ++++EM I P +++I+
Sbjct: 189 FTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSII 248
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
CK+ D+ E+++ +G P +++Y +LI +C G+ +A L+ M + V
Sbjct: 249 IDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
P++VT+ L++ LCKEGKV EA L M+ RG+ P++++YN+LI +C G + ++
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARE 368
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L M G PD +++ GY K ++ A+ L + + G Y L+ L
Sbjct: 369 LFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLF 428
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
Q + A L + G L IY + LCK + +A+ L +++ NIK +
Sbjct: 429 QGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIE 488
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+ LI C G+ A L +++ + + PD ++I+ +C V KA L
Sbjct: 489 CFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 548
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
K D +Y + F E L K++EL
Sbjct: 549 EKNGCTPDKITYATLIRGFFESKKLEKVVEL 579
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 167/361 (46%), Gaps = 8/361 (2%)
Query: 251 CKNGDVDKVNGF--LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G++ F + P L ++ L+S K + FYLY M + P
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D T L+N LC +V E + ++ RG PDIV+Y TLI C E ++ ++ L
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL----QRFGVSISRDIYDYLIV- 423
M G P+ T +++G + G + AL L E+ +G++ + Y I+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249
Query: 424 -ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
ALC+D R A L E + G P++ Y L+ C +A L +EMV++ ++
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ T+ LI C G+ EA L++ M++ G++P+ LI G+C+ D+N A L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D Y + N + + + + M+L L++G P+ T ++ L++
Sbjct: 370 FVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQ 429
Query: 603 G 603
G
Sbjct: 430 G 430
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 15/394 (3%)
Query: 102 CQSDSVS-ALTFFNWVKND-----LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL 155
C++ ++S AL + ND + KP +Y +I+ L + + A + E+
Sbjct: 212 CRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK-- 269
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
V+ +V + LI + G E+ + F + ++ G QP++V+ N L++ L
Sbjct: 270 VQGMTPTVISYTSLIH-------GFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 322
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K + + + E M + GI PN T+N L FC GD++ + +G +PD+
Sbjct: 323 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 382
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ Y LI+ YCK ++ +A LY M + PD+ TY L+ GL + GKV +A +LF
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M G+ D+ Y + CK G + E+ L ++ I D ++ G K G+
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L +A L +L + + Y+ +I C+ + A L +++ ++G P Y
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
L+ + + + L MV R++ ++ R
Sbjct: 563 LIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 596
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 213/437 (48%), Gaps = 21/437 (4%)
Query: 88 PHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK 147
P +HE + L++ ++D AL FN V ++ Y I+H LA + KF
Sbjct: 125 PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 184
Query: 148 MLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIV 206
+L ++ + C +F +L+ + K+ L + F V +PS+
Sbjct: 185 VLHQMT--YETCKFHEGIFLNLMK-------HFSKLSLHERVVEMFDAIXPIVREKPSLK 235
Query: 207 SCNFLLNGLLKLNC---------IDQCWQVYEEMGRIGIC-PNTHTFNILTHVFCKNGDV 256
+ + LN L++ N ID ++V EEM + + PN T++ L + C +G +
Sbjct: 236 AISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRL 295
Query: 257 -DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
+ + F E + ++ PD +TYN LI+ +C +++ A + M + P++ Y+
Sbjct: 296 KEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSA 355
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
LMNG CKEG++ EA ++F M GL PD V Y TLI +C+ G++ E+ LL +M N
Sbjct: 356 LMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENK 415
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
DT T +I+ G +EGR A ++ L GV +++ Y ++ +LC++ AT
Sbjct: 416 CRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKAT 475
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
L+ + G +P NEL+ LC+ V DA++ +++ KP +++ L+
Sbjct: 476 QLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELI 535
Query: 496 CGIGRSGEAVSLMDEML 512
C + A L+D+++
Sbjct: 536 CRERKLLPAFELLDDLV 552
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 160/371 (43%), Gaps = 22/371 (5%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE------EEGFDPDLVTYNTLISSYCKK 288
G N T+ + H K+ ++ L ++ EG +L+ + + +S + +
Sbjct: 158 GFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERV 217
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL---------CKEGKVREAHQLFHRMVHR 339
+ DA + I+ + P L +T +N L K G + A ++ M
Sbjct: 218 VEMFDA--IXPIVREK---PSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKS 272
Query: 340 GLS-PDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLL 397
+S P++++Y+TLI C G+++E+ L EM+ + I PD T ++ G+ ++
Sbjct: 273 HVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVD 332
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL ++ +++ G + + Y L+ C++ R A + + + G P Y L+
Sbjct: 333 RALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLI 392
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
C+ V +A+ L +M + + T+ ++ C GR EA +++ + G+
Sbjct: 393 NFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVY 452
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
+ R+++N C E ++ KA L+G + + + N + E G + +
Sbjct: 453 LNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMA 512
Query: 578 QKRFLRLGFAP 588
L LGF P
Sbjct: 513 LLGLLELGFKP 523
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 128/297 (43%), Gaps = 34/297 (11%)
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMV-HRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
P +++ + +N + +E + A ++F+R+ RG S + +Y T++ K K Q +
Sbjct: 125 PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 184
Query: 367 LLYEMMGNGIYPDTFTCQI---IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+L++M TC+ I K LS VVE+ I R+ +
Sbjct: 185 VLHQMTYE-------TCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAI 237
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK- 482
+ C +LL Q K + A + +EM ++
Sbjct: 238 STC--------LNLLVESNQSSIT-------------AKNGDIDSAFEVVEEMKKSHVSY 276
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEML-ESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+L TY LI CG GR EA+ L +EM+ + +LPD+ LING+C V++A
Sbjct: 277 PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALK 336
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
++ F K + +Y+A+ N F ++G L + E+ LG P+ + +I+
Sbjct: 337 IMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLIN 393
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 194/370 (52%), Gaps = 7/370 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG-RIGIC 237
Y G + KTF + G +PS+ S N LLN L++ + V++ G R +
Sbjct: 129 GYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVL 188
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN + NIL CK +V+ L+++ G P++V+Y T++ + +G ++ A +
Sbjct: 189 PNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKV 248
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+R + R PD+ +YT L++G C+ GK+ +A ++ M G+ P+ V+Y +I AYCK
Sbjct: 249 FREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCK 308
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD- 416
E K E+ +L+ +M+ + + C +V +EG + A + + R ++
Sbjct: 309 EKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAV 368
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+ LI LC+ + A ++ + G+ G V SL YN L+ LC+ + +A L D+M
Sbjct: 369 VVSTLIHWLCKKGKVLEARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDM 427
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC----M 532
V++ + P+ TY LI FC +G + E + +++EMLE+ LP+ +LI+G M
Sbjct: 428 VEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGM 487
Query: 533 EKDVNKAEAL 542
++++NK +L
Sbjct: 488 KQEINKVVSL 497
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 170/388 (43%), Gaps = 49/388 (12%)
Query: 74 SHLTLLQNDLKPLLPHLGAHEISRVLLR---CQSDSVSALTFFNWVKNDLEIKPTSSNYC 130
S + L L+ PH E ++R V AL F +++ I+P+ +
Sbjct: 101 SEIESLLAGLRSSPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLRIES-FGIRPSVRSIN 159
Query: 131 LIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESF 190
+++ L N ++ A + K+C V +++SC A K + +
Sbjct: 160 ALLNSLVQNKRYRLAFLVF-------KNCGERFRVLPNVVSCNILLK-ALCKGNEVEVAV 211
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
K + +G P++VS +L G + +D +V+ E+ G P+ ++ +L F
Sbjct: 212 KVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGF 271
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK----------------------- 287
C+ G + ++ +E+ G +P+ VTY +I +YCK
Sbjct: 272 CRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGS 331
Query: 288 ------------KGRLNDAFYLYRIMYRRNV-LPDLVTYTTLMNGLCKEGKVREAHQLFH 334
+G + A ++R++ R+N L V +TL++ LCK+GKV EA +F
Sbjct: 332 ELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFD 391
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+G +++YNTLI C+ G++ E+ L +M+ G+ P+ FT ++++G+ K G
Sbjct: 392 EF-GKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVG 450
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLI 422
+ ++ E+ ++ Y LI
Sbjct: 451 NAKEGIRVLEEMLENRCLPNKSTYTILI 478
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 146/359 (40%), Gaps = 71/359 (19%)
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
T+I Y G+ A + + + P + + L+N L + + R A +F R
Sbjct: 125 TVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGER 184
Query: 340 -GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+ P++VS N L+ A CK +++ + +L EM G G+ P+ + ++ G+ G +
Sbjct: 185 FRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDG 244
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
A+ + R++ D G+ P + Y L++
Sbjct: 245 AM-----------KVFREVLD------------------------RGWSPDVTSYTVLVD 269
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C+ + DA+ + D M D ++P+ TY +I +C +SGEAV+L+++M+ ++
Sbjct: 270 GFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVV 329
Query: 519 DSQICRVLINGYCMEKDVNKA--------------------EALLGFFAKKFQIYDTE-- 556
S++C +++ C E +V KA L+ + KK ++ +
Sbjct: 330 GSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNV 389
Query: 557 -------------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN + E G+L + L + G APN T +I K
Sbjct: 390 FDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCK 448
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 224/508 (44%), Gaps = 36/508 (7%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D +AL FF V + T++++ ++ +LA + P + D
Sbjct: 65 DPATALAFFECVARRPGFRHTAASHAALLQLLA------------------RRRAPANYD 106
Query: 165 -VFQDLISCT---EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS--C-NFLLNGLLK 217
+ +ISC+ ED +RE+ + VG + ++S C N L LL+
Sbjct: 107 KLVLSMISCSGTAED----------VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLR 156
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + ++Y + + G+ P+T T+N + +CK G + + + + E G D T
Sbjct: 157 FDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYT 216
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
N L+ YC+ L A +L +M + +YT L+ GLC+ VREA L MV
Sbjct: 217 CNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMV 276
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
H G S ++ +Y LI CKEG++ +++ LL EM G+ P +T ++ GY K GR+
Sbjct: 277 HDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMK 336
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + +++ G + Y+ LI LC + A LL G+ P++ + L+
Sbjct: 337 DALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLI 395
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
CK + + DAL +K M+ N K L Y LI R EA ++EM +G+
Sbjct: 396 NGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLA 455
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ +I+GYC V A + + + +Y ++ +D L K M L
Sbjct: 456 PNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMAL 515
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ G P +T +I K E
Sbjct: 516 ITKMQEDGITPGVITYTTLIQGQCKKHE 543
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 65/426 (15%)
Query: 178 WAYVKV--GLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
W Y + GLI++ + K + G P +++ L+ G K + D ++++E
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEM 553
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDK--------------------VNGF-------- 262
M + G+ P+ +N+LT CK+G ++ V+GF
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDF 613
Query: 263 ----LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+EK+ EG DL TY+ L+ + CK+ +LN+A + M V ++V YT +++
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIIS 673
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
+ KEGK A LF+ M+ G P +Y I +YCK G+++E++ L+ EM +G+ P
Sbjct: 674 EMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTP 733
Query: 379 DTFTCQIIVQGYGKEG---RLLSALNLVVELQRFGVSISRDIYDYLI-----VALCQDNR 430
D T I + G G G R S L +V+ S + + Y + + + N
Sbjct: 734 DVVTYNIFINGCGHMGYIDRAFSTLKRMVD-----ASCEPNCWTYWLLLKHFLKMSLINA 788
Query: 431 PFAATS-------------LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ TS LLER+ + G P++ Y+ ++ CK + +A +L D M+
Sbjct: 789 HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++I P+ Y LI C C I G+AVS + +M+E G P + LI G C E D +
Sbjct: 849 GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908
Query: 538 KAEALL 543
+A++L
Sbjct: 909 RAKSLF 914
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 195/428 (45%), Gaps = 10/428 (2%)
Query: 171 SCTEDCNWAYVKV------GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
C D +W Y + G + E+ + + GF P++++ L+NG K ID
Sbjct: 349 GCNPD-DWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDA 407
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+V M + + +L +V K + + L ++ G P++VTY ++I
Sbjct: 408 LRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDG 467
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YCK G + A ++++M P+ TY +L+ GL ++ K+ +A L +M G++P
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+++Y TLI CK+ + + L M NG+ PD ++ K GR A + +V
Sbjct: 528 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV 587
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
R GV +++ Y L+ + A L+E++ +G L Y+ L+++LCK
Sbjct: 588 ---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +AL + D+M +K ++ Y +I G+ A SL +EM+ SG P +
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
V I+ YC + +AE L+G + D +YN N G + + KR +
Sbjct: 705 VFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDA 764
Query: 585 GFAPNNLT 592
PN T
Sbjct: 765 SCEPNCWT 772
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 185/438 (42%), Gaps = 19/438 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG++ + + F+ G P+ + L+ GL++ + + + +M GI P
Sbjct: 467 GYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITP 526
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ L CK + D E +E+ G PD YN L + CK GR +A Y
Sbjct: 527 GVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---Y 583
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ R+ V+ VTYT+L++G K G A L +MV+ G D+ +Y+ L+ A CK+
Sbjct: 584 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K+ E+ S+L +M +G+ + II+ KEG+ A +L E+ G S Y
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTY 703
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
I + C+ R A L+ + +DG P + YN + + A MVD
Sbjct: 704 TVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVD 763
Query: 479 RNIKPSLSTYRALICCFCG--------IGRSGE--------AVSLMDEMLESGMLPDSQI 522
+ +P+ TY L+ F + SG L++ M++ G+ P
Sbjct: 764 ASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVT 823
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
+I G+C + +A LL K + E Y + + K + +
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMI 883
Query: 583 RLGFAPNNLTCKYMIHSL 600
GF P + Y+I L
Sbjct: 884 EFGFQPQLESYHYLIVGL 901
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 179/392 (45%), Gaps = 3/392 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ-CWQVYEEMGRIGIC 237
AY K G + + + F + G Q +CN LL G + + + + CW + M +G
Sbjct: 188 AYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM-MPLMGCR 246
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +++ IL C+ V + + + +G +L TY LI CK+GR++DA L
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M R V+P + TY +++G CK G++++A + M G +PD +YN+LI+ C
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG 366
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
GK+ E++ LL + G P T ++ GY K R+ AL + + +
Sbjct: 367 -GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQA 425
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI L + R A L + +G P++ Y +++ CK V AL + M
Sbjct: 426 YGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLME 485
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P+ TY +LI + +A++L+ +M E G+ P LI G C + + +
Sbjct: 486 HEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFD 545
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
A L + D ++YN + + + G
Sbjct: 546 NAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG 577
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 177/444 (39%), Gaps = 54/444 (12%)
Query: 3 VISPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNF--------LPE 54
+I KK + I+K+ + +Y+ I + N F P+
Sbjct: 503 LIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 562
Query: 55 TQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFN 114
Q N + D +C S + +++ L++ + +L + + + + +A+
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVRKGV--VLTKVTYTSLVDGFSKAGNTDFAAVLIEK 620
Query: 115 WVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML---------CELV-------ELVKD 158
V K Y +++ L K + A+ +L C +V E++K+
Sbjct: 621 MVNEG--CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 159 CPH--SVDVFQDLISCTEDCNW--------AYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
H + +F ++IS + +Y K+G I E+ + G P +V+
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTY 738
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG-------------- 254
N +NG + ID+ + + M PN T+ +L F K
Sbjct: 739 NIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWN 798
Query: 255 --DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+++ V LE++ + G +P +VTY+++I+ +CK RL +A L M +++ P+
Sbjct: 799 WIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEI 858
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT L+ C +A M+ G P + SY+ LI C EG +KSL +++
Sbjct: 859 YTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLL 918
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRL 396
G + +I+ G K G +
Sbjct: 919 GMDYNHNEVAWKILNDGLLKAGHV 942
>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g19290
gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 250/509 (49%), Gaps = 22/509 (4%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
++ +L R + + + L FN + +P YC +VHIL+ + LCELV
Sbjct: 73 LNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVA 132
Query: 155 LVKDCPHS-VDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLDVGFQP 203
L HS V+ +L+ ++ +++ Y + GL++ + F + G P
Sbjct: 133 L----NHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIP 188
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
S++SCN LL+ L++ VY++M + P+ T +I+ + +C++G+VDK F
Sbjct: 189 SLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFA 248
Query: 264 EKIEEE-GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ E G + ++VTYN+LI+ Y G + + R+M R V ++VTYT+L+ G CK
Sbjct: 249 KETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCK 308
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+G + EA +F + + L D Y L+ YC+ G+++++ + M+ G+ +T
Sbjct: 309 KGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C ++ GY K G+L+ A + + + + Y+ L+ C+ A L +++
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
Q VP++ YN L++ + + D L L M+ R + + L+ +G
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL---GFFAKKFQIYDTESYN 559
EA+ L + +L G+L D+ V+I+G C + VN+A+ +L F K + ++Y
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV---QTYQ 545
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
A+ + + + G+L + +++ R G P
Sbjct: 546 ALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 212/498 (42%), Gaps = 74/498 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G IR++ + +++G + + CN L+NG K + + Q++ M + P
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+N L +C+ G VD+ +++ ++ P ++TYN L+ Y + G +D L+
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
++M +R V D ++ +TL+ L K G EA +L+ ++ RGL D ++ N +I CK
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKM 519
Query: 359 GKMQESKSLL---------------------YEMMGN--------------GIYPDTFTC 383
K+ E+K +L Y +GN GI+P
Sbjct: 520 EKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMY 579
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G K L +LV+EL+ G++ + Y LI C A + + +
Sbjct: 580 NTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIE 639
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD------------------------- 478
G ++ I +++ SL + D + +A LL ++VD
Sbjct: 640 KGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT 699
Query: 479 -------------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQICR 524
+ + P+ Y I C G+ +A L ++L S +PD
Sbjct: 700 QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYT 759
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
+LI+G + D+NKA L A K I + +YNA+ + G++ + L + +
Sbjct: 760 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 585 GFAPNNLTCKYMIHSLWK 602
G PN +T +I L K
Sbjct: 820 GITPNAITYNTLIDGLVK 837
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 213/475 (44%), Gaps = 17/475 (3%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
ND +KP Y +V A+K+ ++ + K+ +V + L+
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ--KEVVPTVMTYNILLK------ 444
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
Y ++G + ++ L G +SC+ LL L KL ++ +++E + G+
Sbjct: 445 -GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+T T N++ CK V++ L+ + P + TY L Y K G L +AF +
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAV 563
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M R+ + P + Y TL++G K + + L + RGL+P + +Y LI +C
Sbjct: 564 KEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCN 623
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS--R 415
G + ++ + +EM+ GI + C I + ++ A L+ ++ F + + +
Sbjct: 624 IGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQ 683
Query: 416 DIYDYLIVA--LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
+ ++L + C + A S+ + VP+ +YN + LCK + DA L
Sbjct: 684 SLKEFLEASATTCLKTQKIAE-SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Query: 474 DEMV--DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+++ DR I P TY LI G +A +L DEM G++P+ LI G C
Sbjct: 743 SDLLSSDRFI-PDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLC 801
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+V++A+ LL +K + +YN + + + G++++ M L+++ + G
Sbjct: 802 KLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 171/388 (44%), Gaps = 41/388 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y +G + + R + G ++V+ L+ G K +++ V+E + +
Sbjct: 270 GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H + +L +C+ G + + + E G + N+LI+ YCK G+L +A ++
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIF 389
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ PD TY TL++G C+ G V EA +L +M + + P +++YN L+ Y +
Sbjct: 390 SRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + SL M+ G+ D +C +++ K G A+ L + G+
Sbjct: 450 GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITL 509
Query: 419 DYLIVALCQDNRPFAATSLLERIG-----------------------------------Q 443
+ +I LC+ + A +L+ + +
Sbjct: 510 NVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER 569
Query: 444 DGYVPSLEIYNELMESLCK---CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
G P++E+YN L+ K + VAD ++ E+ R + P+++TY ALI +C IG
Sbjct: 570 KGIFPTIEMYNTLISGAFKYRHLNKVADLVI---ELRARGLTPTVATYGALITGWCNIGM 626
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLIN 528
+A + EM+E G+ + IC + N
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIAN 654
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 159/337 (47%), Gaps = 3/337 (0%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+E F P ++ ++ Y +KG + +A +++ M +P L++ +L++ L ++G+
Sbjct: 149 KEFSFSP--TVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGEN 206
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQI 385
A ++ +M+ +SPD+ + + ++ AYC+ G + ++ E + G+ + T
Sbjct: 207 FVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNS 266
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ GY G + ++ + GVS + Y LI C+ A + E + +
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
V +Y LM+ C+ + DA+ + D M++ ++ + + +LI +C G+ EA
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ M + + PD L++GYC V++A L +K + +YN + +
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G ++ L K L+ G + ++C ++ +L+K
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFK 483
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 148/358 (41%), Gaps = 74/358 (20%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P++ + L +G K+ + + + V E M R GI P +N L K ++KV
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+ ++ G P + TY LI+ +C G ++ A+ M + + ++ + + N L
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 322 KEGKVREAHQLFHRMV--------------------------------------HRGLSP 343
+ K+ EA L ++V + L P
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNL 402
+ + YN I CK GK+++++ L +++ + + PD +T I++ G
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG------------- 764
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+I+ DI N+ F +L + + G +P++ YN L++ LCK
Sbjct: 765 --------CAIAGDI-----------NKAF---TLRDEMALKGIIPNIVTYNALIKGLCK 802
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+V A L ++ + I P+ TY LI G EA+ L ++M+E G++ S
Sbjct: 803 LGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 182 KVGLIRESFKTFRKTLDVG-FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K G + ++ K F L F P + L++G I++ + + +EM GI PN
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNI 790
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L CK G+VD+ L K+ ++G P+ +TYNTLI K G + +A L
Sbjct: 791 VTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEK 850
Query: 301 MYRRNVL 307
M + ++
Sbjct: 851 MIEKGLV 857
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 209/482 (43%), Gaps = 58/482 (12%)
Query: 179 AYVKVGLIRESFKTFRKT--LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y++ G + E+ F T LD+ PS+ CN LL+ LLK N +D W VY+ M +
Sbjct: 161 GYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNV 220
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE---------------------GFDPDL 275
+ ++ +L C++G+V L K EEE G P
Sbjct: 221 VFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSR 280
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+YN LI CK+ RL DA L M + D V Y+ L++GL K A+ L H
Sbjct: 281 QSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHE 340
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
MV G S D + Y+ I KEG M+++K+L M+ G+ P +++G+ +E
Sbjct: 341 MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKN 400
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ L+VE+++ + IS Y + +C A ++++ +G G P++ IY
Sbjct: 401 VRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTT 460
Query: 456 LMESLCKCDSVADAL-LLKD----------------------------------EMVDRN 480
L+++ + DA+ +LK+ EMV+
Sbjct: 461 LIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENG 520
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
KP TY A I + G A + EMLE G++P+ +C LIN YC + V +A
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ ++ + D ++Y + N ++G ++ E+ G AP+ + +I
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640
Query: 601 WK 602
K
Sbjct: 641 SK 642
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 207/430 (48%), Gaps = 12/430 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y++ G + K ++ L+ G P+ V C L+N K + + + M GI
Sbjct: 534 GYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILG 593
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ +L + KNG V+ ++ +G PD+ +Y TLI + K G + A ++
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF 653
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + +++ Y L+ G C+ G++ +A +L M +G P+ V+Y T+I YCK
Sbjct: 654 DEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E+ L EM G+ PD+F +V G + + A+ + E G + S +
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT-IFETNEKGCASSSAPF 772
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYV-----PSLEIYNELMESLCKCDSVADALLLK 473
+ LI + + + T ++ R+ DG P+ YN +++ LCK ++ A L
Sbjct: 773 NALINWVFKFGKTELTTDMINRL-MDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELF 831
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
M N+ P++ TY +L+ + +GR E S+ DE++ +G+ PD+ + V+IN + E
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891
Query: 534 KDVNKAEALLGFFAKKFQIYD-----TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
KA LL K + D + A+ + FA+ G++ ++ + +RL + P
Sbjct: 892 GMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIP 951
Query: 589 NNLTCKYMIH 598
++ T +I+
Sbjct: 952 DSSTVIELIN 961
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 212/475 (44%), Gaps = 21/475 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD------LISCTEDCN 177
P+ +Y L++ L + A +L E+ +SV +F D LI
Sbjct: 278 PSRQSYNLLIDGLCKQKRLEDAKSLLVEM--------NSVGLFADNVAYSILIDGLLKGR 329
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A GL+ E + GF + ++ + + K +++ +++ M G+
Sbjct: 330 NADAANGLVHE-------MVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVT 382
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P + L F + +V K L +I++ TY T + C G L+ A+ +
Sbjct: 383 PGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI 442
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ M P++V YTTL+ ++ + +A ++ M +G++PD YN+LI K
Sbjct: 443 VKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
KM E++S L EM+ NG PD FT + GY + G SA V E+ GV ++ +
Sbjct: 503 AKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVL 562
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
LI C+ + A S + + G + + Y LM L K V DA + EM
Sbjct: 563 CTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMR 622
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ I P + +Y LI F +G +A S+ DEM+++G+ + I +L+ G+C ++
Sbjct: 623 GKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIE 682
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
KA+ LL + K + +Y + + + + GDL++ +L G P++
Sbjct: 683 KAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFV 737
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 202/425 (47%), Gaps = 6/425 (1%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + ++ + G P N L+ GL K +D+ EM G P+ T+
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFI 532
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ + G+ + +++++ E G P+ V LI+ YCKKG++ +A +R M + +L
Sbjct: 533 SGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGIL 592
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D TYT LMNGL K GKV +A ++FH M +G++PD+ SY TLI + K G MQ++ S+
Sbjct: 593 GDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSI 652
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ G+ + +++ G+ + G + A L+ E+ G + Y +I C+
Sbjct: 653 FDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCK 712
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A L + + G VP +Y L++ C+ + V A+ + E ++ S +
Sbjct: 713 SGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAP 771
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGM----LPDSQICRVLINGYCMEKDVNKAEALL 543
+ ALI G++ +++ +++ P+ ++I+ C E ++ A+ L
Sbjct: 772 FNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELF 831
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK- 602
K + +Y ++ N + + G S++ + + G P+N+ +I++ K
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891
Query: 603 GMERK 607
GM K
Sbjct: 892 GMTTK 896
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 176/364 (48%), Gaps = 10/364 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK G + ++ + F + G P + S L++G KL + + +++EM + G+ N
Sbjct: 606 VKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNV 665
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N+L FC++G+++K L+++ +GF P+ VTY T+I YCK G L +AF L+
Sbjct: 666 IIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE 725
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + ++PD YTTL++G C+ V A +F +G + +N LI K GK
Sbjct: 726 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVFKFGK 784
Query: 361 MQESKSLLYEMMGNGI----YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ + ++ +M P+ T I++ KEG L +A L +Q+ + +
Sbjct: 785 TELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVI 844
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+ + R S+ + + G P +Y+ ++ + K AL+L D+M
Sbjct: 845 TYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM 904
Query: 477 -----VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
VD K S+ST RAL+ F +G A +++ M+ +PDS LIN C
Sbjct: 905 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESC 964
Query: 532 MEKD 535
+ +
Sbjct: 965 ISSN 968
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 174/418 (41%), Gaps = 58/418 (13%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFD--PDLVTYNTLISSYCKKGRLNDAFYLYRI 300
F IL + + G +D+ ++ D P L N L+ + K+ RL+ + +Y+
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVR---------------------EAHQLFHRMVHR 339
M RNV+ D+ +Y L+ C++G V+ EA +L M +
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GL P SYN LI CK+ +++++KSLL EM G++ D I++ G K +A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
LV E+ G SI +YDY I + ++ A +L + + G P Y L+E
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 460 LCKCDSVADALLLKDEMVDRNI-----------------------------------KPS 484
+ +V L E+ RNI +P+
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ Y LI F R G+AV ++ EM E G+ PD+ LI G K +++A + L
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +Y A + + E G+ + + K L G PN + C +I+ K
Sbjct: 515 EMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 129/371 (34%), Gaps = 78/371 (21%)
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHR-------------------GLSPD-IVSYN 349
L +++ L LC G + +AH + RM+ R G S D ++ +
Sbjct: 97 LDSFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFG 156
Query: 350 TLIFAYCKEGKMQESKSLLYEM--MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
LI Y ++G + E+ + + + P C ++ K RL ++ +
Sbjct: 157 ILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMV 216
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLL----ERIGQ-----------------DGY 446
V Y+ LI A C+D A +L E +G G
Sbjct: 217 ERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGL 276
Query: 447 VPSLEIYNELMESLCK--------------------CDSVA-----DALL---------- 471
VPS + YN L++ LCK D+VA D LL
Sbjct: 277 VPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANG 336
Query: 472 LKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
L EMV Y IC G +A +L D M+ G+ P ++ LI G+
Sbjct: 337 LVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFF 396
Query: 532 MEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNL 591
EK+V K LL K+ + +Y GDL + K G PN +
Sbjct: 397 REKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVV 456
Query: 592 TCKYMIHSLWK 602
+I + +
Sbjct: 457 IYTTLIKTFLQ 467
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 171/343 (49%), Gaps = 2/343 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ K +R+ +D G P +C L+ GL +D +++ + + G+ N+ +N L
Sbjct: 172 EAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FC+ G VDK + G PDLVTYN L++ C++G +++A L M R V
Sbjct: 232 DGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVE 291
Query: 308 PDLVTYTTLMNGLCKEGKVREAH-QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PDL +Y L+ G CK V AH + RM +G+ D+VSYNT+I A+CK + ++
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC-DVVSYNTVITAFCKARRTRKGYE 350
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
L EM G GI PD T I++ + +EG L+ E+ + V Y ++ LC
Sbjct: 351 LFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLC 410
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
++ + A S+ + ++G P + YN L+ CK V DA+ L DEM + + P
Sbjct: 411 KNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEV 470
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
TY+ ++ + A + D+M+E G + + L+N
Sbjct: 471 TYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 194/430 (45%), Gaps = 12/430 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN- 239
VK GLI ++ F + + + V N + LL+ + + Y R + P
Sbjct: 21 VKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYY----RRHVIPRG 76
Query: 240 ----THTFNILTHVFCK---NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
T++ C N ++ ++ L ++ GF PD+ +NT ++ C++ RL
Sbjct: 77 FSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLE 136
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
A L+ M + PD+V+YT +++ LC + EA +++ R++ +GLSPD + L+
Sbjct: 137 TALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALV 196
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
C G++ + L+ ++ G+ ++ ++ G+ + GR+ A+ + + R G
Sbjct: 197 VGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCV 256
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
Y+ L+ C++ A L+E + + G P L YNEL++ CK + V A L+
Sbjct: 257 PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLM 316
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
E + + +Y +I FC R+ + L +EM G+ PD +LI+ +
Sbjct: 317 MVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
E + + LL K + D Y AV + ++G + + + + G P+ ++
Sbjct: 377 EGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVIS 436
Query: 593 CKYMIHSLWK 602
+++ K
Sbjct: 437 YNALLNGFCK 446
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 180/402 (44%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+GF P I + N LN L + N ++ +++ M G P+ ++ I+ C D+
Sbjct: 113 LGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDE 172
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ ++G PD L+ C GR++ A+ L + + V + + Y L++
Sbjct: 173 AAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALID 232
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G C+ G+V +A ++ M G PD+V+YN L+ C+EG + E+ L+ M +G+ P
Sbjct: 233 GFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEP 292
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D ++ +++G+ K + A ++VE + Y+ +I A C+ R L
Sbjct: 293 DLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELF 352
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
E + G P + +N L+++ + S L DEM + P Y A++ C
Sbjct: 353 EEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKN 412
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G+ A S+ +M+E+G+ PD L+NG+C V A L K D +Y
Sbjct: 413 GKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTY 472
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ +S + + + GF N + +++++
Sbjct: 473 KLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAI 514
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 131/243 (53%), Gaps = 2/243 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC-WQVYEEMGRIGICPNTHT 242
G++ E+ + G +P + S N LL G K N +D+ + E M G+C + +
Sbjct: 273 GMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMC-DVVS 331
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + FCK K E++ +G PD+VT+N LI ++ ++G + L M
Sbjct: 332 YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMT 391
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ VLPD + YT +++ LCK GKV AH +F MV G++PD++SYN L+ +CK ++
Sbjct: 392 KMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVM 451
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ L EM G+YPD T ++IV G + ++ A + ++ G +++R + + L+
Sbjct: 452 DAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511
Query: 423 VAL 425
A+
Sbjct: 512 NAI 514
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 149/388 (38%), Gaps = 74/388 (19%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIM-------------------------------YRR 304
+ Y + IS K G +N A YL+ M YRR
Sbjct: 11 LAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR 70
Query: 305 NVLPD-----LVTYTTLMNGL--------------------------------------C 321
+V+P TY+ ++ L C
Sbjct: 71 HVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLC 130
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
++ ++ A +LFH M +G PD+VSY +I A C + E+ + ++ G+ PD
Sbjct: 131 RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYK 190
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
C +V G GR+ A LVV + + GV ++ +Y+ LI C+ R A + +
Sbjct: 191 ACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFM 250
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+ G VP L YN L+ C+ V +A+ L + M ++P L +Y L+ FC
Sbjct: 251 SRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMV 310
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A +M E +++ + D +I +C + K L K D ++N +
Sbjct: 311 DRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNIL 370
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ F +G + +L ++ P+
Sbjct: 371 IDAFLREGSTHVVKKLLDEMTKMRVLPD 398
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 94/176 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K R+ ++ F + G +P +V+ N L++ L+ ++ +EM ++ + P
Sbjct: 338 AFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLP 397
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + + CKNG VD + + E G +PD+++YN L++ +CK R+ DA +L+
Sbjct: 398 DCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLF 457
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
M + + PD VTY ++ GL + K+ A +++ +M+ RG + + TL+ A
Sbjct: 458 DEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513
>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 150/625 (24%), Positives = 267/625 (42%), Gaps = 61/625 (9%)
Query: 23 SFSSASSSYSLQIIQDSEHKSLS-----NPLYNFLPETQNPNKIVDLICSSLKK----GD 73
+ + ++ ++LQ K+L+ P F +N + I IC S +K G
Sbjct: 46 TLQNPTTHFNLQNWDPDSPKALAIPPSKTPCERFFDIAKNLSPIARYICDSFRKHRNWGP 105
Query: 74 SHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIV 133
+ L N L+ + P L A +L+ Q+D V FF+W K ++Y
Sbjct: 106 PVVADL-NKLRRVTPVLVAE-----VLKVQTDPVICSKFFHWAGKQKGYKHNFASYNAFA 159
Query: 134 HILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTF 193
+ L +N+F A + EL+ + + P S F+ LI D N ++V + E K F
Sbjct: 160 YCLNRSNQFR-AADQVPELMNM-QGKPPSEKQFEILIRMHIDANRG-LRVYYVYEKMKKF 216
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
G +P + N +++GL+K +D VYE+ G+ + T+ IL CK
Sbjct: 217 ------GIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKA 270
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G +D+V L+++ PD+ Y ++ +G L+ ++ M + V PD++ Y
Sbjct: 271 GRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAY 330
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHR---------------------------------- 339
TTL+ LC +V E +LF M +
Sbjct: 331 TTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMD 390
Query: 340 -GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G D+ YN+LI C ++ ++ L + + P+ T + ++ Y + R+
Sbjct: 391 SGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMDD 450
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+L+ ++Q+ G + D+ + V + + R A + E + GY S+ IYN LME
Sbjct: 451 FCSLLGQMQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGYC-SISIYNILME 509
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
++ + V AL L D++ D N KP STY I CF +G EA + ++++E LP
Sbjct: 510 AIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLP 569
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE-SYNAVFNMFAEDGDLSKLMEL 577
R L+ G C ++++ A L+ E Y + G+ K++++
Sbjct: 570 SVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDV 629
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
++ G P+ +T +I + K
Sbjct: 630 LNEMMQEGCTPDEVTYSALISGMCK 654
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 37/182 (20%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V+E + G C + +NIL + G+V K + I++ F PD TY+ I +
Sbjct: 488 EVFEHLKAKGYC-SISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICF 546
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE---------------------- 323
+ G + +A Y + LP + Y +L+ GLCK
Sbjct: 547 VEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPM 606
Query: 324 --------------GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
G + + + M+ G +PD V+Y+ LI CK G ++E++ +
Sbjct: 607 EFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFS 666
Query: 370 EM 371
M
Sbjct: 667 NM 668
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE-MGRIGICP 238
+V+VG ++E+ + K +++ PS+ + L+ GL K ID + + + + P
Sbjct: 546 FVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGP 605
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ + CK+G+ +KV L ++ +EG PD VTY+ LIS CK G L +A ++
Sbjct: 606 MEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVF 665
Query: 299 RIMYRRNVLPD 309
M R +L +
Sbjct: 666 SNMRERKLLTE 676
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 3/183 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A + G ++++ F D F+P + + + +++ + + Y ++ + P
Sbjct: 510 AIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLP 569
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEK-IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ + L CK+ ++D + + P Y I CK G +
Sbjct: 570 SVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDV 629
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAY 355
M + PD VTY+ L++G+CK G + EA ++F M R L +++ Y+ ++ +
Sbjct: 630 LNEMMQEGCTPDEVTYSALISGMCKHGTLEEARKVFSNMRERKLLTEANVIVYDEILIEH 689
Query: 356 CKE 358
K+
Sbjct: 690 MKK 692
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 2/382 (0%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
SF F L G++P ++ L+ GL I + ++++ +G N ++ L +
Sbjct: 123 SFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLIN 182
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK G L +I+ + D+V YNT+I CK +NDAF Y M + + P
Sbjct: 183 GLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICP 242
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+VTY TL+ GLC G++++A L H+M+ ++P + +++ L+ A+CKEGK++E+K++
Sbjct: 243 TVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVF 302
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
MM + P+ T ++ GY + A ++ + + GV+ Y +I C+
Sbjct: 303 VVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKI 362
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A L E + P + YN L++ LCK ++ AL L EM DR P++ TY
Sbjct: 363 KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITY 422
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-GFFA 547
+L+ C +A+ L+ ++ + + P +LING C + A+ +
Sbjct: 423 NSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLV 482
Query: 548 KKFQIYDTESYNAVFNMFAEDG 569
+ I D +YN + F + G
Sbjct: 483 NGYNI-DVYTYNTMIKGFCKKG 503
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 198/407 (48%), Gaps = 8/407 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G ++V+ + L+N +L + V+ + + G P+ T L C GD+ K
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ GF + V+Y TLI+ CK G+ A + R + + V D+V Y T+++G
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG 218
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+CK+ V +A + MV + + P +V+YNTLI C G+++++ LL++M+ I P
Sbjct: 219 VCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPT 278
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I+V + KEG++ A N+ V + + V + Y+ L+ C N A S+
Sbjct: 279 VYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFN 338
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ Q G P + Y+ ++ CK V +A+ L +EM + I P + TY +LI C G
Sbjct: 339 TMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSG 398
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE--- 556
R A+ L+ EM + G P+ L++ C V+KA LL K + ++ +
Sbjct: 399 RISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELL----TKLKDHNIQPSV 454
Query: 557 -SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN + N + G L ++ + L G+ + T MI K
Sbjct: 455 CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 126/216 (58%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ K G ++E+ F + +P+IV+ N L+NG +N +++ ++ M +IG+ P
Sbjct: 288 AFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAP 347
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ H+++I+ FCK VD+ E++ + PD+VTYN+LI CK GR++ A L
Sbjct: 348 DVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLI 407
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ R P+++TY +L++ LCK V +A +L ++ + P + +YN LI CK
Sbjct: 408 GEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKS 467
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
G++++++ + +++ NG D +T +++G+ K+G
Sbjct: 468 GRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 75/148 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K+ ++ E+ K F + P +V+ N L++GL K I ++ EM G P
Sbjct: 358 GFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPP 417
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N L CKN VDK L K+++ P + TYN LI+ CK GRL DA ++
Sbjct: 418 NIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVF 477
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ D+ TY T++ G CK+G V
Sbjct: 478 EDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
+KM+ E ++L ++ H +F D+++ + K G I + K + D G P+I
Sbjct: 362 IKMVDEAMKLFEEM-HCKQIFPDVVTYNSLID-GLCKSGRISYALKLIGEMHDRGQPPNI 419
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++ N LL+ L K + +D+ ++ ++ I P+ T+NIL + CK+G + E
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFED 479
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
+ G++ D+ TYNT+I +CKKG + F+
Sbjct: 480 VLVNGYNIDVYTYNTMIKGFCKKGFVIPQFW 510
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 209/436 (47%), Gaps = 19/436 (4%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + + + G P+++ CN L+ L + +V E +G P+
Sbjct: 72 VQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALG-----PSA 126
Query: 241 H--TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+N + + +C+ G++D ++ + F PD TYN LI + C +G + DA ++
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVF 183
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R P +VTY+ L++ CKE ++A L M +G PDIV+YN LI A C +
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E+ +L + G PD T +++ R A L+ ++ + +
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL-LLKD--- 474
+ +I +LCQ AT +L ++ + G P + Y+ +M+ LCK V +A+ LLK+
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY-CME 533
EMV +N P T+ +I C G A+ ++DEM E G +PD +++G+ C
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS 423
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+A LL DT +Y ++ + + ++ + + + +R +G +P+
Sbjct: 424 CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD---- 479
Query: 594 KYMIHSLWKGMERKFQ 609
K + +++ G+ +K++
Sbjct: 480 KMLYNAILLGLCKKWR 495
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 194/408 (47%), Gaps = 16/408 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
Y + G I + R+ +D V F P + N L+ L C+ V+++M G
Sbjct: 137 GYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCS 192
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ T++IL CK + L+++ +G +PD+VTYN LI++ C +G + +A +
Sbjct: 193 PSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKV 252
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+ PD VTYT ++ LC + EA +L +M +PD V++N +I + C+
Sbjct: 253 LNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQ 312
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS--- 414
+G + + +L +M +G PD T I+ G KE R+ A+ L+ EL VS +
Sbjct: 313 KGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP 372
Query: 415 -RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES-LCKCDSVADALLL 472
+ ++ +I +LCQ A +++ + + G +P + YN +++ LCK +AL L
Sbjct: 373 DQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDL 432
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLING 529
+ MV + P +TY++L G+ R E A+ + + G+ PD + ++ G
Sbjct: 433 LNLMVSNGLCPDTTTYKSLA---FGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLG 489
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
C + + A + + D +Y + A +G L + EL
Sbjct: 490 LCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKEL 537
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 5/366 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ F L G PS+V+ + LL+ K + Q + +EM G P+ T+
Sbjct: 174 GCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTY 233
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L + C GDV + L + G PD VTY ++ S C R +A L M+
Sbjct: 234 NVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFS 293
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD VT+ ++ LC++G V A ++ +M G +PDI++Y++++ CKE ++ E
Sbjct: 294 NDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDE 353
Query: 364 S----KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ K LL EM+ PD T I+ ++G A+ +V E+ G Y+
Sbjct: 354 AIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYN 413
Query: 420 YLIVA-LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
++ LC+ + A LL + +G P Y L L + D + A+ + +
Sbjct: 414 CIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQA 473
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P Y A++ C R+ A+ M+ +G +PD +L+ G E + +
Sbjct: 474 MGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEE 533
Query: 539 AEALLG 544
A+ LLG
Sbjct: 534 AKELLG 539
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 15/310 (4%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
Q D AL N + + KP + Y ++ L + ++ A K+L ++ DC
Sbjct: 243 QGDVGEALKVLNSLPS-YGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFS--NDCAPD 299
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
F +I+ + + G + + K + + G P I++ + +++GL K +D
Sbjct: 300 EVTFNAVIT-------SLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVD 352
Query: 223 QCWQVYEE----MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ ++ +E M P+ TFN + C+ G D+ ++++ E G PD+ TY
Sbjct: 353 EAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTY 412
Query: 279 NTLISSY-CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
N ++ + CK + +A L +M + PD TY +L GL +E ++ A +F R+
Sbjct: 413 NCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQ 472
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
GLSPD + YN ++ CK+ + + M+ NG PD T I+V+G EG L
Sbjct: 473 AMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLE 532
Query: 398 SALNLVVELQ 407
A L+ L
Sbjct: 533 EAKELLGNLS 542
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 148/326 (45%), Gaps = 10/326 (3%)
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N + ++G L+ A L + P ++ L+ LC +G+V +A ++ +
Sbjct: 65 NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G S I++YNT++ YC+ G + ++ ++ + PDTFT +++ G +L
Sbjct: 123 -GPSATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLD 178
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL + ++ G S S Y L+ A C+++ A LL+ + G P + YN L+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
++C V +AL + + + KP TY ++ C R EA L+ +M + P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +I C + V +A +L ++ D +Y+++ + ++ + + ++L
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358
Query: 579 KRFLRLGFA----PNNLTCKYMIHSL 600
K L + P+ +T +I SL
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSL 384
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 207/419 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++ K F + +D+G P+ ++ N +++G +K ++ +++ ++M G PN
Sbjct: 28 RSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIV 87
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L C+ G +D+ ++++ PD TY+ L + G L+
Sbjct: 88 TYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAES 147
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ V+ T + L+NGLCK+GKV +A Q+ +VH GL P V YNTLI YC+ +
Sbjct: 148 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDL 207
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + + +M I PD T ++ G K + A +LV+E+++ GV S + ++ L
Sbjct: 208 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 267
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I A + ++L + Q G + + ++++ CK + +A+ + D+M+ +++
Sbjct: 268 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 327
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ Y ++I + G + +A L+++M SG+ +L+ G C +++AE
Sbjct: 328 APNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 387
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L+ + D SYN + + GD K +EL + + G P T ++ +L
Sbjct: 388 LIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSAL 446
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 231/499 (46%), Gaps = 44/499 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y +++ L + K S A+K+ E+V++ P+ + + +I +VK
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDM-GVVPNWI-TYNTMID-------GHVKG 64
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F+ + L G +P+IV+ N LL+GL + +D+ + +EM + P+ T+
Sbjct: 65 GDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTY 124
Query: 244 NIL-----------------------------------THVFCKNGDVDKVNGFLEKIEE 268
+IL + CK+G V K LE +
Sbjct: 125 SILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVH 184
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G P V YNTLI+ YC+ L AF ++ M R++ PD +TY L+NGLCK V +
Sbjct: 185 TGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTK 244
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L M G+ P + ++NTLI AY G++++ ++L +M GI D + +V+
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 304
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
+ K G++ A+ ++ ++ V+ + +Y+ +I A + A L+E++ G
Sbjct: 305 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 364
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S+ YN L++ LC+ + +A L + ++ ++P + +Y +I C G + +A+ L+
Sbjct: 365 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 424
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
EM + G+ P + L++ V+ E L K + Y + + +
Sbjct: 425 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 484
Query: 569 GDLSKLMELQKRFLRLGFA 587
+ SK+ L+K G A
Sbjct: 485 ENDSKVASLKKEMSEKGIA 503
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 161/317 (50%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD +YN +I+ + G+ +DA ++ M V+P+ +TY T+++G K G + +L
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M+H G P+IV+YN L+ C+ G+M E++ L+ EM + ++PD FT I+ G +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + L+L E + GV + L+ LC+D + A +LE + G VP+ I
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ C+ + A + ++M R+I+P TY ALI C + +A L+ EM
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+SG+ P + LI+ Y + K +L +K D S+ +V F ++G +
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 573 KLMELQKRFLRLGFAPN 589
+ + + + APN
Sbjct: 314 EAVAILDDMIYKDVAPN 330
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G R F ++L G +C+ LLNGL K + + QV E + G+ P T
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+N L + +C+ D+ E+++ PD +TYN LI+ CK + A L
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + V P + T+ TL++ G++ + + M +G+ D++S+ +++ A+CK GK
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ ++L +M+ + P+ I+ Y + G A LV +++ GVS S Y+
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
L+ LC+ ++ A L+ + G P + YN ++ + C AL L EM
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I+P+L TY L+ GR + L +ML + P S I ++++ Y ++ +K
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 491
Query: 541 ALLGFFAKKFQIYD 554
+L ++K +D
Sbjct: 492 SLKKEMSEKGIAFD 505
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 168/365 (46%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ ++N++ ++G +++ + G P+ +TYNT+I + K G L F L
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M P++VTY L++GLC+ G++ E L M + PD +Y+ L +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ + SL E + G+ +TC I++ G K+G++ A ++ L G+ + I
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI CQ A + E++ P YN L+ LCK + V A L EM
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ PS+ T+ LI + G+ + +++ +M + G+ D ++ +C +
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A A+L K + + YN++ + + E GD + L ++ G + + +T ++
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373
Query: 598 HSLWK 602
L +
Sbjct: 374 KGLCR 378
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 132/290 (45%), Gaps = 11/290 (3%)
Query: 102 CQ-SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
CQ D A F +K+ I+P Y +++ L + A ++ E+ + D
Sbjct: 202 CQVRDLRGAFCIFEQMKSR-HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD-- 258
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
SV+ F LI AY G + + F G + ++S ++ K
Sbjct: 259 PSVETFNTLID-------AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + + ++M + PN +N + + ++GD ++ +EK++ G +VTYN
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ C+ ++++A L + + + PD+V+Y T+++ C +G +A +L M G
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ P + +Y+TL+ A G++ + + L +M+ + P + I+V Y
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAY 481
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
IK ++ +V N K A+ +L +++ KD + V+ +I AY+
Sbjct: 292 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMI--YKDVAPNAQVYNSIID-------AYI 342
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++F K + G SIV+ N LL GL + + ID+ ++ + G+ P+
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++N + C GD DK L+++ + G P L TY+TL+S+ GR++D LY+ M
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
+NV P Y +++ + + L M +G++ D
Sbjct: 463 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 242/533 (45%), Gaps = 63/533 (11%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL-----ISCTE 174
+ +P S Y +++ + F + +LC+ L +V++F+ L + C
Sbjct: 39 FKFRPAFSAYTILIGKVGLMLLFPW---VLCKANRL----DEAVELFEQLEQNRKVPCAY 91
Query: 175 DCN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
N Y G E++ + G PS+++ N +L L K +++ +++EEM
Sbjct: 92 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 151
Query: 232 GRIGICPNTHTFNILTHVFCKNG----------DVDKVNGF---------------LEKI 266
R + PN T+NIL + C+ G D+++ F +K+
Sbjct: 152 KRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKL 210
Query: 267 EE-----EGFD-----PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
EE EG D P+ VT+++LI K GR++DA+ LY M +P + YT+L
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ K G+ + H+++ MVH G SPD+ NT + K G+ ++ ++L E+ +G
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD + I++ G K G L ++ G + Y+ +I C+ + A
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LLE + G+ P++ Y +++ L K D + +A +L +E IK ++ Y +LI F
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK------F 550
+GR EA +M+E+++ G+ P+ L++ +++N EAL+ F + K
Sbjct: 451 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEIN--EALICFQSMKDLKCPPN 508
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
QI +Y+ + N +K + +LG PN +T MI L K
Sbjct: 509 QI----TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKA 557
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 220/496 (44%), Gaps = 11/496 (2%)
Query: 67 SSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTS 126
S+ K +++ L + K +P + A+ L + AL F +K D P
Sbjct: 102 SAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD--AVPNV 159
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
Y +++ +L K + A++ ++D +F ++++ + K +
Sbjct: 160 PTYNILIDMLCREGKLNAALE--------IRDDMERAGLFPNVLTVNIMIDR-LCKAQKL 210
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
E+ F D P+ V+ + L++GL K +D + +YE+M G P + L
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
F K G + + +++ G PDL NT + K G L+R +
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
+PD +Y+ L++GL K G E ++LF+ M +G D +YN +I +CK GK+ ++
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL EM G P T ++ G K RL A L E + G+ ++ +Y LI
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A ++E + Q G P++ +N L+++L K + + +AL+ M D P+
Sbjct: 451 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 510
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY LI C + + +A EM + G+ P++ +I+G ++ +A L F
Sbjct: 511 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 570
Query: 547 AKKFQIYDTESYNAVF 562
I D+ SYNA+
Sbjct: 571 KANGGIPDSASYNAMI 586
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 185/415 (44%), Gaps = 15/415 (3%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH----------V 249
GF PS L+ +K + + + + + M + P + IL V
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
CK +D+ E++E+ P YNT+I Y G+ ++A+ L + +P
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
++ Y ++ L K+ +V EA ++F M R P++ +YN LI C+EGK+ + +
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M G++P+ T I++ K +L A ++ + + + + LI L +
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
R A SL E++ G+VP +Y L+ S KC D + EMV P L+
Sbjct: 244 RVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLIN 303
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+ C G + + +L E+ G +PD++ +LI+G N+ L F+A K
Sbjct: 304 TYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL--FYAMK 361
Query: 550 FQ--IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Q + DT +YNAV + F + G ++K +L + G P +T +I L K
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LCK + + +A+ L +++ P Y +I + G+ EA L++ G +P
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFA-KKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
++ C+ K EAL F K+ + + +YN + +M +G L+ +E++
Sbjct: 125 VIAYNCILT--CLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIR 182
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWKGME 605
R G PN LT MI L K +
Sbjct: 183 DDMERAGLFPNVLTVNIMIDRLCKAQK 209
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 225/483 (46%), Gaps = 9/483 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L++KP S +YC +V + S A + ++ L K +V + L+
Sbjct: 236 LDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQM--LRKGIEPTVVTYNTLLK-------G 286
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ G +++ + + L G P+ V LL+GL K+ + +++++ GI +
Sbjct: 287 LCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKS 346
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ FN + + CK G++D +++EE G PD +TY TL YCK G + +AF +
Sbjct: 347 IYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKE 406
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + P + Y +L+ GL K+ + L M RGLSP++V+Y LI +C +G
Sbjct: 407 KMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQG 466
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ ++ S +EM+G G P+ C IV + GR+ A L+ ++ F + + +
Sbjct: 467 RLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLE 526
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
A + + L+ +P+ +YN M LCK V DA +
Sbjct: 527 DFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHG 586
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P TY LI F G EA +L DEM+ G++P+ L+NG C +++A
Sbjct: 587 SFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRA 646
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L K I + +YN + + + + G + ++L+ + L+ G +P+ +T +I+
Sbjct: 647 RRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLING 706
Query: 600 LWK 602
K
Sbjct: 707 FCK 709
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 211/456 (46%), Gaps = 40/456 (8%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + G+++ + F G +PS+ SCN LL+ L+K VY++M R+ I P+
Sbjct: 6 YAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPD 65
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T I+ + +CK G V++ F+ ++E+ GF+ + V+YN+L+ Y G + A + +
Sbjct: 66 VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLK 125
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR-GLSPDIVSYNTLIFAYCKE 358
M + V+ + VT T L+ G CK+ KV EA ++ M G+ D +Y LI YCK
Sbjct: 126 FMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKV 185
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GKM ++ + EM+ G+ + F C ++ GY K G++ L++ +++ + + D Y
Sbjct: 186 GKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRK--LDLKPDSY 243
Query: 419 DY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD-------- 468
Y L+ C+D A ++ +++ + G P++ YN L++ LC+ D
Sbjct: 244 SYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLM 303
Query: 469 ---------------------------ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
AL L D+++ R I S+ + +I C +G
Sbjct: 304 LQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEM 363
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A M E G PD R L +GYC +V +A + K+ E YN++
Sbjct: 364 DGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSL 423
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+SKL++L G +PN +T +I
Sbjct: 424 IVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALI 459
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 208/449 (46%), Gaps = 2/449 (0%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
LV D +D+ D+ +C N AY K G + + + R+ +GF+ + VS N L++G
Sbjct: 52 LVYDQMRRLDIVPDVFTCAIMVN-AYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDG 110
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE-EEGFDP 273
+ L I+ V + M G+ N T +L +CK V++ L ++E E+G
Sbjct: 111 YVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVV 170
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D Y LI YCK G++ DA + M + + +L +L+NG CK G+V E +L
Sbjct: 171 DEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLL 230
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M L PD SY TL+ YC++G ++ ++ +M+ GI P T +++G +
Sbjct: 231 MCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRF 290
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G AL L + + GV+ + Y L+ L + A +L + I G S+ +
Sbjct: 291 GDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAF 350
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK + A M + KP TYR L +C +G EA + ++M +
Sbjct: 351 NTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEK 410
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ P ++ LI G K ++K LL + + +Y A+ + + G L K
Sbjct: 411 EEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDK 470
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GFAPN + C ++ SL++
Sbjct: 471 AFSAYFEMIGKGFAPNVIICSKIVSSLYR 499
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 201/425 (47%), Gaps = 6/425 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y KVG + ++ + + L VG + ++ CN L+NG K + + ++ M ++ + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+++++ L +C++G K +++ +G +P +VTYNTL+ C+ G DA L+
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+M +R V P+ V Y TL++GL K G A L+ ++ RG++ I ++NT+I CK
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G+M +K M G PD T + + GY K G + A + ++++ + S ++Y
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LIV L + LL + G P++ Y L+ C + A EM+
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P++ ++ +GR EA L+ +M++ ++ D + N + D K
Sbjct: 481 KGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWK 540
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL---GFAPNNLTCKY 595
L A KF + + YN + G K+ + ++ FL L F P+N T
Sbjct: 541 IADTLDESAIKFSLPNNVVYNIAMAGLCKSG---KVNDARRFFLGLSHGSFTPDNFTYCT 597
Query: 596 MIHSL 600
+IH
Sbjct: 598 LIHGF 602
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 207/456 (45%), Gaps = 44/456 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P YC ++ L FS A+ + ++ L + S+ F +I+
Sbjct: 308 VTPNEVGYCTLLDGLFKMGDFSRALTLWDDI--LARGINKSIYAFNTMIN-------GLC 358
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + +TF++ ++G +P ++ L +G K+ +++ +++ E+M + I P+
Sbjct: 359 KMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIE 418
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L + + K+ L +++ G P++VTY LI+ +C +GRL+ AF Y M
Sbjct: 419 MYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEM 478
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-------HRGLS------------ 342
+ P+++ + +++ L + G++ EA+ L +MV HR L
Sbjct: 479 IGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDC 538
Query: 343 ----------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
P+ V YN + CK GK+ +++ + PD FT +
Sbjct: 539 WKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTL 598
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ G + A NL E+ G+ + Y+ L+ LC+ A L +++ G
Sbjct: 599 IHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGL 658
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P++ YN L++ CK S +AL L+ +M+ I PS+ TY +LI FC EA+
Sbjct: 659 IPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMK 718
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
L++EM S + L+ G DV K L
Sbjct: 719 LLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 164/333 (49%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L++G K+ + +V +EM ++G+ N N L + +CKNG V + L + +
Sbjct: 178 LIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLD 237
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
PD +Y TL+ YC+ G + AF + M R+ + P +VTY TL+ GLC+ G ++A
Sbjct: 238 LKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDAL 297
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L+H M+ RG++P+ V Y TL+ K G + +L +++ GI + ++ G
Sbjct: 298 RLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGL 357
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + A ++ G Y L C+ A + E++ ++ PS+
Sbjct: 358 CKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSI 417
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
E+YN L+ L ++ + L EM R + P++ TY ALI +C GR +A S E
Sbjct: 418 EMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFE 477
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
M+ G P+ IC +++ +++A LL
Sbjct: 478 MIGKGFAPNVIICSKIVSSLYRLGRIDEANMLL 510
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 163/359 (45%), Gaps = 1/359 (0%)
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
++ V+ + G V + + + G P L + N+L+S+ K+G A +Y M R
Sbjct: 1 MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+++PD+ T ++N CK GKV A + M G + VSYN+L+ Y G ++ +
Sbjct: 61 DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF-GVSISRDIYDYLIV 423
K +L M G+ + T ++++GY K+ ++ A ++ E+++ GV + Y LI
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ + A + + + + G +L + N L+ CK V + L M ++KP
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+Y L+ +C G S +A ++ D+ML G+ P L+ G C D A L
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ + Y + + + GD S+ + L L G + MI+ L K
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCK 359
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + F F P + L++G +++ + + +EM G+ PN
Sbjct: 569 KSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNIT 628
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CK+G +D+ +K+ +G P++VTYN LI YCK G +A L M
Sbjct: 629 TYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKM 688
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + P ++TY++L+NG CK+ V EA +L + M + I +++ L+ + G +
Sbjct: 689 LKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDV 748
Query: 362 QESKSLLYEMM 372
++ S L+ MM
Sbjct: 749 KKM-SKLHNMM 758
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ G + E+F + ++ G P+I + N LLNGL K +D+ ++++++ G+ P
Sbjct: 601 GFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIP 660
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+NIL +CK+G + K+ +EG P ++TY++LI+ +CK+ + +A L
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
M NV + T++ L+ G + G V++ +L H M+H
Sbjct: 721 NEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL-HNMMH 759
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 10/226 (4%)
Query: 77 TLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHIL 136
TL ++ +K LP+ + I+ L C+S V+ F + P + YC ++H
Sbjct: 544 TLDESAIKFSLPNNVVYNIAMAGL-CKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGF 602
Query: 137 AWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKT 196
+ + A + E+V K ++ + L++ K G + + + F K
Sbjct: 603 SAAGYVNEAFNLRDEMVN--KGLVPNITTYNALLN-------GLCKSGYLDRARRLFDKL 653
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
G P++V+ N L++G K + + +M + GI P+ T++ L + FCK DV
Sbjct: 654 HLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDV 713
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L +++ D + T++ L+ + G + L+ +M+
Sbjct: 714 EEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMH 759
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 248/567 (43%), Gaps = 24/567 (4%)
Query: 47 PLYNFLPETQNP--------NKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRV 98
PLY+ NP N+I+ L+ S+ + + L L P+ A +
Sbjct: 70 PLYDLSDLASNPQPQPSPWVNQILKLLDGSVNMESNLDSYCSKFLIKLSPNFVAFVLKSD 129
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+R + D A FF W Y ++ +L+ ++ F + E E K
Sbjct: 130 AIRGKPDI--AFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKE--KG 185
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
+V LI ++ +G++ E +R+ + G +PS+ + NFLLNGL+
Sbjct: 186 FLMTVFAANSLIR-------SFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNS 238
Query: 219 NCIDQCWQVYEEM--GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
I+ +V+E M G+IG P+ ++N + +CK G+ K +E+ +PD +
Sbjct: 239 MFIESAERVFEVMECGKIG--PDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKI 296
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TY TLI + +G + +LY+ M R + Y+ ++ GLCK+G+ E +F M
Sbjct: 297 TYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM 356
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+G ++ Y LI AY K G + E+ +L M G G PD T +IV G K GRL
Sbjct: 357 NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRL 416
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A+ + V+++ Y LI L + R A E + + G YN L
Sbjct: 417 DEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNAL 476
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+++L K + +AL+L M ++ TY LI R+ EA+ L D M++ G+
Sbjct: 477 IDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGI 536
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P + R L G C+ V +A +L A I +T ++ + N+ + G + +
Sbjct: 537 TPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACK 595
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKG 603
L + G +I++L K
Sbjct: 596 LADGIVDRGREVPGRVRTILINALRKA 622
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 205/451 (45%), Gaps = 9/451 (1%)
Query: 161 HSVDVFQDLISCTEDCNWA--YVKVGLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLN 213
++V VFQ + ++A + L+R +F +RK L+ + VS + LL
Sbjct: 56 NAVSVFQQAVDSGGSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLE 115
Query: 214 GLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
+++ V M + G N + +NIL C+N + K L ++ + P
Sbjct: 116 CFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMP 175
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
D+V+YNT+I +C+ L A L M LVT+ L++ CK GK+ EA L
Sbjct: 176 DVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLL 235
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
M H+GL D++ Y +LI +C G++ K+L E++ G P T +++G+ K
Sbjct: 236 KEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
GRL A + + GV + Y LI LC + A LL + Q P++ Y
Sbjct: 296 GRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTY 355
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK VADAL + + M R +P TY +L+ C G EA L+ ML+
Sbjct: 356 NIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLK 415
Query: 514 SGMLPDSQIC--RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
D + LI+G C +++A + +K D + N + N + GD+
Sbjct: 416 DSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDV 475
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+K MEL K+ PN+ T MI K
Sbjct: 476 NKAMELWKQISNSKIVPNSDTYTTMIDGFCK 506
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 201/435 (46%), Gaps = 22/435 (5%)
Query: 176 CNW----------AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
C+W A+ K G + E+ ++ G + ++ L+ G +D+
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+++E+ G P T+N L FCK G + + + E + E G P++ TY LI
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
C G+ +A L +M +++ P++VTY ++N LCK+ V +A ++ M R PD
Sbjct: 328 CGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY--PDTFTCQIIVQGYGKEGRLLSALN-- 401
++YN+L+ C +G + E+ LLY M+ + Y PD + ++ G K RL AL+
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447
Query: 402 -LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L+VE G ++ +I L+ + + A L ++I VP+ + Y +++
Sbjct: 448 DLLVEKLGAGDIVTTNI---LLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGF 504
Query: 461 CKCD--SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK +VA LL K + + + PS+ Y L+ C G +A L +EM P
Sbjct: 505 CKTGMLNVAKGLLCKMRLSE--LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFP 562
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D ++I+G D+ AE+LL + D +Y+ + N F + G L + +
Sbjct: 563 DVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 579 KRFLRLGFAPNNLTC 593
+ + GF P+ C
Sbjct: 623 DKMIDSGFEPDAHIC 637
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 222/500 (44%), Gaps = 59/500 (11%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
+ +++ K AM +L E+ K + V+ LI DC G +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKH--KGLEADLIVYTSLIRGFCDC-------GELD 264
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
F + L+ G P ++ N L+ G KL + + +++E M G+ PN +T+ L
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C G + L + ++ +P++VTYN +I+ CK + DA + +M +R
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNTLIFAYCKEGKMQES- 364
PD +TY +L+ GLC +G + EA +L + M+ PD++S+N LI CK ++ ++
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444
Query: 365 --KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
LL E +G G D T I++ K G + A+ L ++ + + D Y +I
Sbjct: 445 DIYDLLVEKLGAG---DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMI 501
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM------ 476
C+ A LL ++ PS+ YN L+ SLCK ++ A L +EM
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSF 561
Query: 477 ---------VDRNIK--------------------PSLSTYRALICCFCGIGRSGEAVSL 507
+D ++K P L TY LI F +G EA+S
Sbjct: 562 PDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISF 621
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEK-DVNKAEALLGFFAKKFQIYDTESYNAVFN-MF 565
D+M++SG PD+ IC ++ YC+ + + +K + K + D E V + M
Sbjct: 622 FDKMIDSGFEPDAHICDSVLK-YCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMC 680
Query: 566 AEDGDLSKLMELQKRFLRLG 585
+ G+ M++ KR LR+
Sbjct: 681 SSSGN----MDIAKRLLRVA 696
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 122/240 (50%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
IV+ N LLN LK +++ ++++++ I PN+ T+ + FCK G ++ G L
Sbjct: 459 IVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLC 518
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
K+ P + YN L+SS CKKG L+ A+ L+ M R + PD++++ +++G K G
Sbjct: 519 KMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAG 578
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
++ A L M H GLSPD+ +Y+ LI + K G + E+ S +M+ +G PD C
Sbjct: 579 DIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICD 638
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
+++ +G V +L V + +++ ++ +C + L R+ D
Sbjct: 639 SVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADD 698
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/587 (22%), Positives = 251/587 (42%), Gaps = 65/587 (11%)
Query: 47 PLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLL--PHLGAHEISRVL---LR 101
P L + I L+C S + H+ LLQ+ L P HE + + L
Sbjct: 57 PQKQHLQQQSLVRSICSLVCESYSQQTPHVRLLQSPSINLSVNPDSLTHEQAITVVASLA 116
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
++ S+ AL+FFNW + + Y + N F A +++ DC
Sbjct: 117 SEAGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFERAHEVM--------DC-- 166
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V VF + +G +E+ + + G ++ + N + ++ +
Sbjct: 167 MVRVFAE--------------IGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLV 212
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
V++EM G+CP++ ++ ++ +C+ G + + +L+ + GF D T +
Sbjct: 213 GYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLM 272
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
IS++C+KG + F+ + + P+L+ +T+L+NGLCK G +++A ++ MV +G
Sbjct: 273 ISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGW 332
Query: 342 SPDIV------------------------------------SYNTLIFAYCKEGKMQESK 365
P++ +Y ++I YCKE K+ ++
Sbjct: 333 KPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAE 392
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL M G+ P+T T ++ G+ K G A L+ + + G S + Y+ I +L
Sbjct: 393 MLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSL 452
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ R A LL++ + G Y L+ LC+ +AL+ +M ++P +
Sbjct: 453 CKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDM 512
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY LI F R E+ L E + G++P + +I GYC +++V+ A
Sbjct: 513 HTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNR 572
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ D+ +Y A+ + ++ L + +L + + G +P +T
Sbjct: 573 MSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVT 619
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 177/375 (47%), Gaps = 1/375 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G F F K +++G +P++++ L+NGL K I Q +++ EEM + G P
Sbjct: 275 TFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKP 334
Query: 239 NTHTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
N +T L CK G +K FL+ + + + P++ TY ++I YCK+ +LN A L
Sbjct: 335 NVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEML 394
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + ++P+ TYT L++G K G +A++L M G S +I +YN I + CK
Sbjct: 395 LSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCK 454
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+G+ E+ LL + G+ DT T I++ + AL ++ + GV
Sbjct: 455 KGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHT 514
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI A + R + L G VP+ E Y ++ C+ +V+ AL + M
Sbjct: 515 YNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMS 574
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
D P TY ALI C + EA L + M++ G+ P L YC + D
Sbjct: 575 DHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSA 634
Query: 538 KAEALLGFFAKKFQI 552
A +L KK I
Sbjct: 635 TAMVILERLDKKLWI 649
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 197/420 (46%), Gaps = 19/420 (4%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
F WV +L +KP N+ +++ L A +ML E+V+ K +V LI
Sbjct: 289 FDKWV--ELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVK--KGWKPNVYTHTALID 344
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVG-FQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
K G ++F+ F K + ++P++ + +++G K + +++ +
Sbjct: 345 -------GLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSR 397
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M G+ PNT T+ L K G+ +K ++ + +EGF ++ TYN I S CKKGR
Sbjct: 398 MKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGR 457
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A L + +R + D VTYT L++ LC+ REA F +M G+ PD+ +YNT
Sbjct: 458 FLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNT 517
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI A+ ++ +M+ES+ L E +G G+ P T ++ GY ++ + AL + G
Sbjct: 518 LIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHG 577
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ Y LI LC++++ A L E + G P L CK D A A+
Sbjct: 578 CTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAM 637
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
++ + + + K + T LI C + G AV ++L+ D + RV + +
Sbjct: 638 VILERL---DKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDK----DQNVDRVTLTAF 690
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 33/222 (14%)
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
RE+ F K G QP + + N L+ + +++ +++ E +G+ P T+ +
Sbjct: 494 REALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSM 553
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
+C++ +V F ++ + G PD +TY LIS CK+ +L++A LY M + +
Sbjct: 554 ICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGL 613
Query: 307 LPDLVT--------------------------------YTTLMNGLCKEGKVREAHQLFH 334
P VT TL+ LC E KV A FH
Sbjct: 614 SPCEVTRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFH 673
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+++ + + D V+ A C E S L E + GI
Sbjct: 674 KLLDKDQNVDRVTLTAFTTA-CYESNKYALVSDLSERISKGI 714
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 190/391 (48%), Gaps = 10/391 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I PT Y I+H + + A E+ ++ + DLI+ N Y
Sbjct: 333 IVPTVVTYNTIIHGMFRSGNVEAARMKFVEM--------RAMGLLPDLITYNSLIN-GYC 383
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E+ F G PS+++ N LL+G +L +++ + +EM G P+
Sbjct: 384 KAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVS 443
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL + K ++ V F +++ +G PD YNT IS+ G ++AF L +M
Sbjct: 444 TYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVM 503
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + D VTY ++GLCK G +++A+ L+ +MV GL PD ++Y LI A+C+ G++
Sbjct: 504 ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRL 563
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ + M+ +G+ P T + + Y + G L SA ++ GV + Y+ L
Sbjct: 564 REARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I ALC+ R A + + G P+ Y L++ CK + +A+ L EM I
Sbjct: 624 IHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI 683
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
P T+ AL F G+S A+ M+ ++
Sbjct: 684 HPDHCTHNALFKGF-DEGQSKHAIQYMENVV 713
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 198/424 (46%), Gaps = 9/424 (2%)
Query: 179 AYVKVGLIRESFKTFRK--TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ + G + ++ K R+ G PS V+ N ++NGL + +++ Q+ + M R+
Sbjct: 240 SFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSK 298
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
+ TFN L + G V+K ++E EG P +VTYNT+I + G + A
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ M +LPDL+TY +L+NG CK G ++EA LF + GL+P +++YN L+ YC
Sbjct: 359 KFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC 418
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ G ++E++ EM+ G PD T I++ G K L E+ G+
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ I A A L E + G YN ++ LCK ++ DA +L +M
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
V ++P TY LI C GR EA + D ML SG+ P + V I+ YC ++
Sbjct: 539 VSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598
Query: 537 NKAEALLGFFAKKFQ--IYDTE-SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
A G+F K + + E +YN + + G + + L G +PN T
Sbjct: 599 YSA---YGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTY 655
Query: 594 KYMI 597
+I
Sbjct: 656 TLLI 659
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 205/444 (46%), Gaps = 10/444 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ Y ++++ LA + A + L + + + K S F LI+ Y
Sbjct: 266 PSDVTYNVVINGLARKGELEKAAQ-LVDRMRMSKKA--SAFTFNPLIT-------GYFAR 315
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + + G P++V+ N +++G+ + ++ + EM +G+ P+ T+
Sbjct: 316 GSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITY 375
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + +CK G++ + ++ G P ++TYN L+ YC+ G L +A + M
Sbjct: 376 NSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVE 435
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ TYT LMNG K + + F M+ +GL PD +YNT I A G E
Sbjct: 436 QGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSE 495
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ GI DT T I + G K G L A L +++ G+ Y LI
Sbjct: 496 AFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIH 555
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C+ R A + + + G PS Y + + C+ ++ A +M++ ++P
Sbjct: 556 AHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRP 615
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY LI C +GR+ A EMLE G+ P+ +LI+G C E + +A L
Sbjct: 616 NEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLY 675
Query: 544 GFFAKKFQIYDTESYNAVFNMFAE 567
+ D ++NA+F F E
Sbjct: 676 SEMHQHGIHPDHCTHNALFKGFDE 699
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 180/412 (43%), Gaps = 3/412 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
FR+ G P I CN +L L D VY EM ++GI P+ T+N L
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 250 FCKNGDVDKVNGFLEKIEEE--GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
F + G VD+ L ++E G P VTYN +I+ +KG L A L M R +
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKK 299
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T+ L+ G G V +A L M + G+ P +V+YNT+I + G ++ ++
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM G+ PD T ++ GY K G L AL L +L+R G++ S Y+ L+ C+
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + G P + Y LM K ++A DEM+ + ++P
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y I +G + EA L + M+ G+ D+ + ++G C ++ A L
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
D +Y + + E G L + ++ L G P+ +T IH+
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHA 591
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 175/394 (44%), Gaps = 25/394 (6%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
C C + EM G+ P N++ D + ++ + G +P +VTY
Sbjct: 175 TCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTY 234
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
NTL+ S+ ++GR++ A L R M R LP VTY ++NGL ++G++ +A QL RM
Sbjct: 235 NTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM 294
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++N LI Y G ++++ +L EM GI P T I+ G + G +
Sbjct: 295 -RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV 353
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+A VE++ G+ Y+ LI C+ A L + + G PS+ YN L
Sbjct: 354 EAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ C+ + +A K EMV++ +P +STY L+ + DEML G+
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473
Query: 517 LPDSQICRVLINGYCMEKDVN-KAEALLGFFAKKFQIY----------DTESYNAVFNMF 565
PD C + AE +LG ++ FQ+ DT +YN +
Sbjct: 474 QPD-----------CFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGL 522
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ G+L L + + G P+ +T +IH+
Sbjct: 523 CKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHA 556
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 224/490 (45%), Gaps = 53/490 (10%)
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNN 140
N ++ L+P + HE+ +L +S AL FF WV+ + + I+ IL +
Sbjct: 1 NSIRNLVPSID-HELVYNVLHSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRAS 59
Query: 141 KFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVG 200
K + A C L+++ K ++ +DL D +Y K G+++ES K F+K ++G
Sbjct: 60 KLNHAR---CILLDMPK---KGLEWDEDLWVLMID---SYGKAGIVQESVKMFQKMEELG 110
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ +I S + L +L+ + + +M GI P HTFN++ F +G V+ N
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
F E ++ PD+VTYNT+++ YC+ ++ +A + M RN+ P +VTYTTL+ G
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP-D 379
+V +A + M G+ P+ ++Y+TL+ C KM E++S+L EM+ I P D
Sbjct: 231 VSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTD 290
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
++ G K G L +A N++ + R V Y LI C+ A LL+
Sbjct: 291 NSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLD 350
Query: 440 RIGQDGYV--PSLEI------YNELMESLCKCDSVADALLLKDE---------------- 475
++ + + P + YN L+E LC A A L +
Sbjct: 351 KVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLI 410
Query: 476 ------------------MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
M+ R + S Y +L+ + +A + +D M+E+G L
Sbjct: 411 RGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHL 470
Query: 518 PDSQICRVLI 527
PDS + R ++
Sbjct: 471 PDSSLFRSVM 480
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 165/380 (43%), Gaps = 45/380 (11%)
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M + G+ + + ++ + K G V + +K+EE G + + +Y+ L ++G
Sbjct: 70 DMPKKGLEWDEDLWVLMIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRG 129
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R A + M + P T+ +M G GKV A++ F M R + PD+V+YN
Sbjct: 130 RYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYN 189
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T++ YC+ KM+E++ EM G I P T +++GY R+ AL V E++ F
Sbjct: 190 TMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGF 249
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ +P A T Y+ L+ LC + +++A
Sbjct: 250 GM------------------KPNAIT-----------------YSTLLPGLCNAEKMSEA 274
Query: 470 LLLKDEMVDRNIKPS-LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
+ EMVD+ I P+ S + LI C G A +++ M+ + ++ VLI
Sbjct: 275 RSILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIE 334
Query: 529 GYCMEKDVNKAEALLGFFAKKFQI--------YDTESYNAVFNMFAEDGDLSKLMELQKR 580
YC + +KA LL +K I ++ +YN + +G +K L ++
Sbjct: 335 NYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQ 394
Query: 581 FLRLGFA-PNNLTCKYMIHS 599
++LG P L HS
Sbjct: 395 LMKLGVQDPTALNTLIRGHS 414
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 180/373 (48%), Gaps = 21/373 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
+V+LR + + A +FN + ++ I+PT + +++ W S ++ E +
Sbjct: 123 KVILR-RGRYMMAKRYFNKMLSE-GIEPTRHTF----NVMMWGFFLSGKVETANRFFEDM 176
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K S ++ D+++ N Y +V + E+ K F + +P++V+ L+ G +
Sbjct: 177 K----SREIMPDVVTYNTMVN-GYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYV 231
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP-DL 275
++ +D + EEM G+ PN T++ L C + + L+++ ++ P D
Sbjct: 232 SVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDN 291
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+ LIS CK G L+ A + + M R +V + Y L+ CK G+ +A +L +
Sbjct: 292 SIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDK 351
Query: 336 MVHRG--LSP------DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
++ + L P + +YN LI C G+ ++++L+ ++M G+ D ++
Sbjct: 352 VIEKDIILRPQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGV-QDPTALNTLI 410
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+G+ +EG SA L+ + R V + YD L+ + + N P A + L+ + ++G++
Sbjct: 411 RGHSQEGSPDSAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIENGHL 470
Query: 448 PSLEIYNELMESL 460
P ++ +MESL
Sbjct: 471 PDSSLFRSVMESL 483
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 200/426 (46%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ +G I SF L G+ P +++ L+ GL + + + ++++ + +
Sbjct: 114 FCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLD 173
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G+ + +EE PD+V YN +I S CK + +A LY
Sbjct: 174 RISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYS 233
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + P++VTYTTL+ G C G + EA L + M + ++PD+ +++ LI A KEG
Sbjct: 234 EMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEG 293
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
KM+ +K +L MM + PD T +V GY + A + + + GV+ Y
Sbjct: 294 KMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYT 353
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ A SL E + +P+ +N L++ LCK +A L D+M DR
Sbjct: 354 IMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDR 413
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ + TY +LI C +A++L +M+ + PD +LI+G C + A
Sbjct: 414 SQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIA 473
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + K D +Y + + F + G + + L + G PN +T +I +
Sbjct: 474 QEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICA 533
Query: 600 LWKGME 605
L++ E
Sbjct: 534 LFEKDE 539
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 190/413 (46%), Gaps = 1/413 (0%)
Query: 192 TFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
+ K LD G +V+ N L+N L I + V + + G P+ T L
Sbjct: 90 SLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGL 149
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C G+V K F + + F D ++Y TLI+ CK G A L R + R++ PD+
Sbjct: 150 CLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDV 209
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
V Y +++ LCK V EA L+ M + + P++V+Y TLI+ +C G + E+ +LL E
Sbjct: 210 VMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNE 269
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M I PD +T I++ GKEG++ +A ++ + + V Y+ L+ N
Sbjct: 270 MKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNE 329
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A + + Q G P ++ Y +++ LCK V +A+ L +EM +N+ P+ T+ +
Sbjct: 330 VKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNS 389
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C GR L+D+M + L D LI+ C +++A AL +
Sbjct: 390 LIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQE 449
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +Y + + + G L E+ + L G+ + T MI K
Sbjct: 450 IQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKA 502
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 198/423 (46%), Gaps = 4/423 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ F + L + P N +L+ L+K+ + + + GI + T NIL
Sbjct: 52 DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILI 111
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC G + L I + G+ PD++T TLI C +G + A + +
Sbjct: 112 NCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQ 171
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
D ++Y TL+NGLCK G+ + A QL + R + PD+V YN +I + CK + E+ +L
Sbjct: 172 LDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNL 231
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVAL 425
EM IYP+ T ++ G+ G L+ A+ L+ E++ +I+ D+Y + LI AL
Sbjct: 232 YSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKL--KNINPDVYTFSILIDAL 289
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
++ + AA +L + + P + YN L++ + V A + + M + P +
Sbjct: 290 GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGV 349
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
+Y +I C EA+SL +EM ++P++ LI+G C + L+
Sbjct: 350 QSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK 409
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ Q+ D +Y+++ + ++ L + + L K+ + P+ T +I L KG
Sbjct: 410 MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469
Query: 606 RKF 608
K
Sbjct: 470 LKI 472
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ L+ G + C+ + + EM I P+ +TF+IL K G +
Sbjct: 242 PNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIV 301
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + PD+VTYN+L+ Y + A Y++ M + V P + +YT +++GLCK
Sbjct: 302 LAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCK 361
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
V EA LF M H+ + P+ +++N+LI CK G++ L+ +M D T
Sbjct: 362 TKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVIT 421
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLER 440
++ K L A+ L ++ I D+Y Y LI LC+ R A + +
Sbjct: 422 YSSLIDALCKNCHLDQAIALFKKM--ITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQH 479
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ GY + Y ++ CK +AL L +M D P+ T+ +IC
Sbjct: 480 LLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDE 539
Query: 501 SGEAVSLMDEMLESGML 517
+ +A L+ EM+ G+L
Sbjct: 540 NDKAEKLLREMIARGLL 556
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 144/320 (45%)
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
S Y NDA L+ M P + +++ L K + A L + +G++
Sbjct: 42 SHYNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGIT 101
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
D+V+ N LI +C G++ S S+L ++ G +PD T +++G G + AL
Sbjct: 102 SDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKF 161
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
++ + R Y LI LC+ AA L+ + + P + +YN +++SLCK
Sbjct: 162 HDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCK 221
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
V +A L EM + I P++ TY LI FC +G EAV+L++EM + PD
Sbjct: 222 NKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYT 281
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
+LI+ E + A+ +L K + D +YN++ + + ++ +
Sbjct: 282 FSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMA 341
Query: 583 RLGFAPNNLTCKYMIHSLWK 602
+ G P + MI L K
Sbjct: 342 QSGVTPGVQSYTIMIDGLCK 361
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ F+K + QP + + L++GL K + +V++ + G + T+ ++
Sbjct: 437 QAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMI 496
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
FCK G D+ L K+E+ G P+ +T++ +I + +K + A L R M R +L
Sbjct: 497 SGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 213/467 (45%), Gaps = 30/467 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ + C S +F L+ AY + G ++K +K + G+QP V N L+ G
Sbjct: 3 ITEGCYPSPMIFNSLVH-------AYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGG 55
Query: 215 ------LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
L + I + Y EM +G+ N T C G +K + ++
Sbjct: 56 ICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMS 115
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +I C ++ AF L++ M R + PD+ TYTTL++ CK G + +
Sbjct: 116 KGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQ 175
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A F M G +P++V+Y LI AY K K+ + + M+ NG P+ T ++
Sbjct: 176 ARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALID 235
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISR-DI----------------YDYLIVALCQDNRP 431
G+ K G A + ++ V I DI Y L+ LC+ ++
Sbjct: 236 GHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKV 295
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A LLE + +G P+ IY+ L++ CK + +A + +M+ P++ TY +L
Sbjct: 296 KEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSL 355
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I R A+ ++ +MLE+ P+ I +++G C ++A L+ +K
Sbjct: 356 IDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGC 415
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ +Y A+ + F + G + + +EL + G APN +T + +I+
Sbjct: 416 YPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLIN 462
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 190/422 (45%), Gaps = 19/422 (4%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++F+ F++ G P + + LL+ K+ I+Q ++EM + G PN T+
Sbjct: 138 VEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L H + K + + N E + G P++VTY LI +CK G A +Y M
Sbjct: 198 LIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDK 257
Query: 306 V-----------------LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
V P++VTY L++GLCK KV+EA L M G P+ + Y
Sbjct: 258 VDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIY 317
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+ LI +CK GK+ E++ + +M+G+G P+ +T ++ K+ RL AL ++ ++
Sbjct: 318 DALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ + IY ++ LC+ + A L+ + + G P++ Y +++ K V
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
L L M + P+ TYR LI C G +A L++EM ++ + R +I
Sbjct: 438 CLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIE 497
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
G+ E + LL ++ + Y + + F + G L +EL + A
Sbjct: 498 GFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAY 555
Query: 589 NN 590
N
Sbjct: 556 QN 557
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 224/499 (44%), Gaps = 34/499 (6%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLR-CQSDSV- 107
F+P++ +K++ +C++ K + + + P + + + +L R C+ +
Sbjct: 117 GFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDV--YTYTTLLDRFCKVGLIE 174
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
A +F+ ++ D P Y ++H K S A ++ E++ L C ++ +
Sbjct: 175 QARNWFDEMQQD-GCAPNVVTYTALIHAYLKTRKLSRANEIF-EMM-LSNGCVPNIVTYT 231
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKT---------LDVGF--------QPSIVSCNF 210
LI + K G ++ + + + +D+ F +P++V+
Sbjct: 232 ALID-------GHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGA 284
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L++GL K + + + + E M G PN ++ L FCK G +D+ K+ G
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++ TY++LI K RL+ A + M + P++V YT +++GLCK GK EA+
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L M +G P++V+Y +I + K G++ LL M G P+ T ++++
Sbjct: 405 RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHC 464
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
G L A L+ E+++ +Y +I + A+ LL + +DG VP L
Sbjct: 465 CAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEF--VASLGLLAELSEDGSVPIL 522
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+Y L+++ K + AL L +E+ + +TY +LI + +A L +
Sbjct: 523 PVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSD 581
Query: 511 MLESGMLPDSQICRVLING 529
M G +P+ + LI G
Sbjct: 582 MTRRGFVPELSMLVCLIKG 600
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 58/391 (14%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND- 293
G P+ FN L H +C++GD L+K+ G+ P V YN LI C L
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 294 -----AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
A Y M V+ + V LC GK +A+ + M+ +G PD +Y
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
+ +I C K++++ L EM NGI PD +T ++ + K G + A N E+Q+
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQ 185
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
G + + Y LI A + + A + E + +G VP++ Y L++ CK
Sbjct: 186 DGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEK 245
Query: 469 ALLLKDEM----------------VDRNIK-PSLSTYRALICCFCGIGRSGEAVSLMDEM 511
A + M VD +K P++ TY AL+ C + EA L++ M
Sbjct: 246 ACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
G P+ I LI+G+C + G L
Sbjct: 306 SLEGCEPNQIIYDALIDGFC-----------------------------------KVGKL 330
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ E+ + L G +PN T +I L+K
Sbjct: 331 DEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 168/370 (45%), Gaps = 13/370 (3%)
Query: 112 FFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
+F V ++L+ +P Y +V L +K A +L E + L + C + ++ LI
Sbjct: 266 YFRIVDSELK-EPNVVTYGALVDGLCKAHKVKEARDLL-ETMSL-EGCEPNQIIYDALID 322
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
+ KVG + E+ + F K L G P++ + + L++ L K +D +V +M
Sbjct: 323 -------GFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL 291
PN + + CK G D+ + +EE+G P++VTY +I + K GR+
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+ L ++M + P+ +TY L+N C G + +AH+L M I Y +
Sbjct: 436 DRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV 495
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
I + E S LL E+ +G P ++++ + K GRL AL L EL F
Sbjct: 496 IEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSA 553
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALL 471
+ ++ Y LI +L + A L + + G+VP L + L++ L + +AL
Sbjct: 554 AY-QNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQ 612
Query: 472 LKDEMVDRNI 481
L D + +I
Sbjct: 613 LSDSICQMDI 622
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 105/276 (38%), Gaps = 41/276 (14%)
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ G P + +N+L+ AYC+ G + LL +M+ G P I++ G
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 396 LLS------ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
L S A E+ GV +++ LC + A +++ + G++P
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
Y++++ LC V A L EM I P + TY L+ FC +G +A + D
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM + G P+ LI+ Y + +++A N +F M
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRA-------------------NEIFEMM---- 218
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
L G PN +T +I K E
Sbjct: 219 ------------LSNGCVPNIVTYTALIDGHCKAGE 242
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 192/387 (49%), Gaps = 1/387 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PS+ + N ++NGL KL +D+ +++ M + P+ TF+ + H K G+ +
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ E G PD+ TYN ++S + G+LN F L+ +M + N ++V+Y L+ GL
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGLLD 371
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
KV +A + + RGL D +Y LI CK G + ++ +L E G DTF
Sbjct: 372 NKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFA 431
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+V G K+G L A+ L+ ++++ ++ +++ LI + + A S+L +
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK 491
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
P++ YN ++ LCK + +DA L EM++ +KP + TY LI C +
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A++L + + + PD Q+ ++I+G C + V+ A + + + D ++N +
Sbjct: 552 MALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIM 611
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ GD + +++ R L G P+
Sbjct: 612 EGLYKAGDCVEALKIWDRILEAGLQPD 638
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 204/473 (43%), Gaps = 40/473 (8%)
Query: 171 SCTEDCNW----AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCW 225
+C+ED AY K + ++ F+ +D+ G P I S N +LN ++ N +
Sbjct: 75 TCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAE 134
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ G+ PN T+NIL + CK +K G L + E G +PD+++Y TLI++
Sbjct: 135 LFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINAL 194
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-HRGLSPD 344
K G L DA L+ M R V PD++ Y L++G ++G +A++++ R++ + P
Sbjct: 195 AKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPS 254
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+ +YN +I CK GK+ ES + M N PD FT ++ G K G +A +
Sbjct: 255 VETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ 314
Query: 405 ELQRFGVS----------------------------ISRD------IYDYLIVALCQDNR 430
E+ G+S +S++ Y+ LI L + +
Sbjct: 315 EMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKK 374
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A + + + G Y L+ LCK + AL + +E + Y +
Sbjct: 375 VEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSS 434
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
++ C G +AV L+ +M ++ +S + LINGY + +A ++L K
Sbjct: 435 MVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKD 494
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
SYN + N + S K L G P+ +T +I L +G
Sbjct: 495 CAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 201/429 (46%), Gaps = 17/429 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
++ +N +K + E P + ++H L+ F+ A K+ E++E V +
Sbjct: 274 SMEMWNRMKKN-EKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIE--SGLSPDVRTYNA 330
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC---W 225
++S + G + + F+ + + +IVS N L+ GLL ++Q W
Sbjct: 331 MLS-------GLFRTGKLNKCFELW-NVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYW 382
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
Q+ E G + ++ T+ +L + CKNG ++K LE+ E EG D D Y++++
Sbjct: 383 QLLHERG---LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGL 439
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
CKKG L A L M + + + +L+NG + K+ EA + M + +P +
Sbjct: 440 CKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTV 499
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
VSYNT+I CK + ++ L EM+ G+ PD T +++ G + ++ ALNL +
Sbjct: 500 VSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQ 559
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ +++ +I LC + A + ++ Q VP L +N +ME L K
Sbjct: 560 CINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGD 619
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+AL + D +++ ++P + +Y C R +A+ + + L+ G+LP++ V
Sbjct: 620 CVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNV 679
Query: 526 LINGYCMEK 534
L+ +K
Sbjct: 680 LVRAVVDDK 688
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 8/238 (3%)
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
VF LI+ YV+ + E+ R+ P++VS N ++NGL K
Sbjct: 466 VFNSLIN-------GYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDA 518
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+ +EM G+ P+ T+++L C+ VD + + PDL +N +I
Sbjct: 519 YLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHG 578
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
C +++ A ++ M + N +PDLVT+ T+M GL K G EA +++ R++ GL PD
Sbjct: 579 LCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPD 638
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS-ALN 401
I+SYN C ++ ++ LY+ + GI P+ T ++V+ + L+ ALN
Sbjct: 639 IISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYALN 696
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 196/411 (47%), Gaps = 8/411 (1%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+++G P +++ N L+NGL + + + +M G+ + T+ + + CK GD
Sbjct: 2 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 61
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
L K+EE PD+V Y+ +I CK G +DA YL+ M + + P++ TY +
Sbjct: 62 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 121
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++G C G+ +A +L M+ R ++PD++++N LI A KEGK+ E++ L EM+ I
Sbjct: 122 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 181
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--YDYLIVALCQDNRPFAA 434
+PDT T ++ G+ K R A ++ F + S D+ ++ +I C+ R
Sbjct: 182 FPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTFNTIIDVYCRAKRVDEG 235
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
LL I + G V + YN L+ C+ D++ A L EM+ + P T L+
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
FC + EA+ L + + S + D+ ++I+G C V++A L D
Sbjct: 296 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 355
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
++YN + + F +S L + G P+N T +I K E
Sbjct: 356 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 406
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 195/420 (46%), Gaps = 4/420 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ K + G +V+ ++NG+ K+ + +M I P+ +
Sbjct: 24 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 83
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + CK+G ++ E+G P++ TYN +I +C GR +DA L R M
Sbjct: 84 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 143
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + PD++T+ L++ KEGK+ EA +L M+HR + PD V+YN++I+ +CK + +
Sbjct: 144 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 203
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K ++++M + PD T I+ Y + R+ + L+ E+ R G+ + Y+ LI
Sbjct: 204 AKH-MFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 259
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ + AA L + + G P N L+ C+ + + +AL L + + I
Sbjct: 260 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL 319
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
Y +I C + EA L + G+ PD Q V+I+G+C + ++ A L
Sbjct: 320 DTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLF 379
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +YN + + G++ K +EL GF+ + T K + + G
Sbjct: 380 HKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDG 439
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 4/367 (1%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M IG+ P TFN L + C G V + + K+ +G D+VTY T+++ CK G
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
A L M ++ PD+V Y+ +++ LCK+G +A LF M+ +G++P++ +YN
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I +C G+ +++ LL +M+ I PD T ++ KEG+L A L E+
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+ Y+ +I C+ NR A + + + P + +N +++ C+ V + +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L E+ R + + +TY LI FC + A L EM+ G+ PD+ C +L+ G+
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C + + +A L DT +YN + + + + + +L G P+
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356
Query: 591 LTCKYMI 597
T MI
Sbjct: 357 QTYNVMI 363
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 174/377 (46%), Gaps = 10/377 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G + + K + +P +V + +++ L K ++ EM GI PN
Sbjct: 57 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 116
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N + FC G L + E +PD++T+N LIS+ K+G+L +A L M
Sbjct: 117 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 176
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + PD VTY +++ G CK + +A +F M SPD+V++NT+I YC+ ++
Sbjct: 177 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRV 232
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E LL E+ G+ +T T ++ G+ + L +A +L E+ GV + L
Sbjct: 233 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 292
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ C++ + A L E I YN ++ +CK V +A L + +
Sbjct: 293 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 352
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P + TY +I FCG +A L +M ++G PD+ LI G +++K+
Sbjct: 353 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 412
Query: 542 LL------GFFAKKFQI 552
L+ GF F I
Sbjct: 413 LISEMRSNGFSGDAFTI 429
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 173/373 (46%), Gaps = 14/373 (3%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D+ SAL + ++ + IKP Y I+ L + S A + E++E K +V
Sbjct: 59 GDTKSALNLLSKME-ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE--KGIAPNV 115
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
+ +I + G ++ + R ++ P +++ N L++ +K + +
Sbjct: 116 FTYNCMID-------GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 168
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ +EM I P+T T+N + + FCK+ D + + PD+VT+NT+I
Sbjct: 169 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 224
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
YC+ R+++ L R + RR ++ + TY TL++G C+ + A LF M+ G+ P
Sbjct: 225 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 284
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
D ++ N L++ +C+ K++E+ L + + I DT II+ G K ++ A +L
Sbjct: 285 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 344
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
L GV Y+ +I C + A L ++ +G+ P YN L+ K
Sbjct: 345 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 404
Query: 464 DSVADALLLKDEM 476
+ ++ L EM
Sbjct: 405 GEIDKSIELISEM 417
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
MV GL+P ++++NTLI C EG++ E+ +L+ +M+G G++ D T IV G K G
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
SALNL+ +++ + IY +I LC+D A L + + G P++ YN
Sbjct: 61 TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ C +DA L +M++R I P + T+ ALI G+ EA L DEML
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ PD+ +I G+C + A+ + A D ++N + +++ + + M
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 236
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSL 600
+L + R G N T +IH
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGF 261
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 18/277 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P + Y +++ +N+F A M D S DV F +I
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIID-------V 225
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E + R+ G + + N L++G +++ ++ +++EM G+CP+
Sbjct: 226 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 285
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T NIL + FC+N +++ E I+ D D V YN +I CK ++++A+ L+
Sbjct: 286 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 345
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ V PD+ TY +++G C + + +A+ LFH+M G PD +YNTLI K G
Sbjct: 346 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 405
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ +S L+ EM NG D FT +++ +GRL
Sbjct: 406 EIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRL 441
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 152/597 (25%), Positives = 242/597 (40%), Gaps = 69/597 (11%)
Query: 64 LICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIK 123
+ C+ G S + LQ+ P I+ ++L +S S AL F W N
Sbjct: 66 MFCNVSNIGRSSVVNLQSKPISTTPVPTHQHIAHLILEQKSAS-QALQTFRWASNLPNFI 124
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
S Y ++H L +F ++L E+ + P +F ++ +
Sbjct: 125 HNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDE-SIFVTIVRGLGRARMVRQMI 183
Query: 184 GLI--------RESFKTFRKTLDV--------------------GFQPSIVSCNFLLNGL 215
++ S K F LDV G + L+ GL
Sbjct: 184 KVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGL 243
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
N I +++ + M G PNT +N + H CKNG V + + ++ E P
Sbjct: 244 CLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSD 299
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VT+N LIS+YC++ L A L + +PD+VT T ++ LCK G+V E ++ R
Sbjct: 300 VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLER 359
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ G D+V+YNTLI +C GK + +L +M G P+ T I+ GY G
Sbjct: 360 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGM 419
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE-----RIGQDGYVPSL 450
L SA++L +++ G++ + YD LI LC R +LE R G G +
Sbjct: 420 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 479
Query: 451 E--IY-----NELMESL-----------------------CKCDSVADALLLKDEMVDRN 480
IY N+ E+L C S+ DA + D+M+
Sbjct: 480 NSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEG 539
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
PS+ Y LI FC G EA L++EM++ G P + LI+ +C + V A
Sbjct: 540 GVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSAL 599
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
L+ + + D SY+ + + GD K + L + + P+ T M+
Sbjct: 600 KLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSML 656
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+K C +VD + L S Y G++ + F G + ++ + L+ GL
Sbjct: 397 IKGCLPNVDTYNILAS-------GYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGL 449
Query: 216 LKLNCIDQCWQVYE--EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP 273
++ +++ E E R G +N + + K ++ FL K+E+ P
Sbjct: 450 CSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEK--LFP 507
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
V + I +C +G + DA +Y M + +P ++ Y L++G C++G VREA +L
Sbjct: 508 RAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELI 567
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ MV G P ++N LI A+C +GK+ + L+ +M+G G PD + +V +
Sbjct: 568 NEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNK 627
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
G A+ L +++ + ++ +++ L Q+ +L QDG
Sbjct: 628 GDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDG 679
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 94/175 (53%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P V + + G I +VY++M + G P+ + L H FC++G+V +
Sbjct: 507 PRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFEL 566
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ ++ + G+ P T+N LIS++C +G++ A L M R LPD+ +Y+ +++ LC
Sbjct: 567 INEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCN 626
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+G ++A +LF +MV + + PD ++N+++ +E E +L + + +G Y
Sbjct: 627 KGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLFHLQLQDGKY 681
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 207/428 (48%), Gaps = 7/428 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ + G + E+ + G + + N++L L+ +V++ M R G+ P
Sbjct: 12 AFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSP 71
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
F L V C+ G V++V+ L + GF D T ++ S C+KGR D +
Sbjct: 72 MNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFF 131
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R M P++V YT ++GLCK V++A + MV RGL P++ ++ TLI CK
Sbjct: 132 RRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKI 191
Query: 359 GKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + L +++ + Y P+ T +++ GY +EG+L A L+V + G+ + +
Sbjct: 192 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNT 251
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI C+ A L+ ++ Q+G++P++ YN +++ CK + +A +
Sbjct: 252 YTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMAT 311
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ +K TY LI C G A+ L D M+E+G PD + LI+ YC ++ +
Sbjct: 312 SQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQME 371
Query: 538 KAEALLGFFAKKFQIY---DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
+++ FF K I ++Y ++ + + G + + + +R ++ G +++T
Sbjct: 372 ESQK---FFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYG 428
Query: 595 YMIHSLWK 602
+I L K
Sbjct: 429 ALISGLCK 436
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 203/421 (48%), Gaps = 6/421 (1%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + FR+ L+ G P++V+ ++GL K + Q + V EEM G+ PN +T
Sbjct: 122 GRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTH 181
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G ++ FL+ I+ + P++ TY +I YC++G+L A L M
Sbjct: 182 TTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMV 241
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P+ TYTTL+ G CK G A +L ++M G P+I +YN +I +CK+GK+Q
Sbjct: 242 EQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQ 301
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ +L G+ D T I++ + K+G + AL+L + G + Y LI
Sbjct: 302 EAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLI 361
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
CQ + + ++ G +P+ + Y ++ CK AL + + MV
Sbjct: 362 STYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCF 421
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN-GYCMEKDVNKAEA 541
TY ALI C R EA +L + ML+ ++P ++ RV + YC + + A +
Sbjct: 422 ADSITYGALISGLCKESRLEEAKALYEGMLDKRLVP-CEVTRVTLTFEYCRREKTSIAVS 480
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K+ Q++ + + V + GD+ K+ L +A ++ T I+S +
Sbjct: 481 VLDRLDKRQQVH---TVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCY 537
Query: 602 K 602
+
Sbjct: 538 E 538
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 151/300 (50%), Gaps = 1/300 (0%)
Query: 182 KVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+G +F+ F K + ++P++ + ++ G + + + + M G+ PNT
Sbjct: 190 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 249
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+T+ L CK G D+ + K+++EGF P++ TYN +I +CKKG++ +A+ + R+
Sbjct: 250 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 309
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + D +TYT L+ CK+G + A LF RMV G PDI +Y +LI YC++ +
Sbjct: 310 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 369
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+ES+ + + G+ P T ++ GY K GR AL + + + G Y
Sbjct: 370 MEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGA 429
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+++R A +L E + VP L C+ + + A+ + D + R
Sbjct: 430 LISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQ 489
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 9/317 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + + + ++ G +P+ + L+ G K D+ +++ +M + G P
Sbjct: 223 GYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLP 282
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +T+N + FCK G + + L +G D +TY LI+ +CK+G + A L+
Sbjct: 283 NIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF 342
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M PD+ YT+L++ C++ ++ E+ + F + + GL P +Y ++I YCK
Sbjct: 343 DRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKV 402
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL---VVELQRFGVSISR 415
G+ + + M+ NG + D+ T ++ G KE RL A L +++ + ++R
Sbjct: 403 GRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTR 462
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
L C+ + A S+L+R+ + V ++++ + +L D A +L LK +
Sbjct: 463 VT---LTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVD--AASLFLK-K 516
Query: 476 MVDRNIKPSLSTYRALI 492
++D + +TY I
Sbjct: 517 VLDEDYAVDHATYTGFI 533
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 1/411 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AYV ++ + G P + N LL L++ N D+ W ++ + + +
Sbjct: 98 AYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVL-KSKVVL 156
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N ++F I+ C+ G +V L +EE G P++V Y TLI CK G + A L+
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLF 216
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R ++P+ TY+ LMNG K+G RE Q++ M G+ P+ +YN LI YC +
Sbjct: 217 CKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCND 276
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + ++ + EM GI T I++ G + + A+ LV ++ + G+S + Y
Sbjct: 277 GMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C + A L ++ G P+L YN L+ K +++A AL L EM +
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I S TY LI F + + +A + M +SG++PD VLI+G C+ ++ +
Sbjct: 397 RCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKE 456
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A + ++ YN + + + ++G + + L + G PN
Sbjct: 457 ASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 166/334 (49%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F K +G P+ + + L+NG K + +Q+YE M R GI PN + +N L +C
Sbjct: 216 FCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCN 275
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+G VDK ++ E+G ++TYN LI C+ + +A L + + + P++VT
Sbjct: 276 DGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVT 335
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y L+NG C GK+ A +LF+++ GLSP +V+YNTLI Y K + + L+ EM
Sbjct: 336 YNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEME 395
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I T I++ + + A + +++ G+ Y LI C +
Sbjct: 396 ERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMK 455
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A+ + +G+ P+ IYN ++ CK S AL L +EMV + P+++++ + +
Sbjct: 456 EASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTM 515
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
C + EA L+ +M+ SG+ P + +++
Sbjct: 516 GLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 169/346 (48%), Gaps = 37/346 (10%)
Query: 235 GICPNTHTFNILTHVFCKNGDV----------DKV-------------NGFLEK-IEEEG 270
G+ PN + L CKNGDV D++ NGF ++ ++ EG
Sbjct: 188 GLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREG 247
Query: 271 FD-----------PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F P+ YN LIS YC G ++ AF ++ M + + ++TY L+ G
Sbjct: 248 FQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ K EA +L H++ GLSP+IV+YN LI +C GKM + L ++ +G+ P
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ GY K L AL+LV E++ ++ S+ Y LI A + N A +
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHS 427
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G VP + Y+ L+ C ++ +A + + +++P+ Y +I +C G
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 500 RSGEAVSLMDEMLESGMLPD-SQICRVLINGYCMEKDVNKAEALLG 544
S A+ L++EM+ SGM+P+ + C + C ++ +AE LLG
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASFCSTM-GLLCRDEKWKEAELLLG 532
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 148/311 (47%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K GL RE F+ + G P+ + N L++ +D+ ++V+ EM GI
Sbjct: 237 GFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIAC 296
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+NIL C+ + + K+ + G P++VTYN LI+ +C G+++ A L+
Sbjct: 297 GVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLF 356
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + P LVTY TL+ G K + A L M R ++ V+Y LI A+ +
Sbjct: 357 NQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARL 416
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ + M +G+ PD +T +++ G G + A L + + IY
Sbjct: 417 NYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIY 476
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C++ + A LL + G VP++ + M LC+ + +A LL +M++
Sbjct: 477 NTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMIN 536
Query: 479 RNIKPSLSTYR 489
+KPS+S Y+
Sbjct: 537 SGLKPSVSLYK 547
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 39/252 (15%)
Query: 393 EGRLLSALNLVVELQRF-GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
GR+ S+L L + F S +YD ++ A + A + L + +G+ P
Sbjct: 66 SGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSN 125
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ L + + A + + + + + + S + +I C G L+ +
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYS-FGIMITGCCEAGYFVRVFRLLAVL 184
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALL--------------------GFFAKK-- 549
E G+ P+ I LI+G C DV A+ L GFF +
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQ 244
Query: 550 ---FQIYD----------TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
FQ+Y+ +YN + + + DG + K ++ G A +T +
Sbjct: 245 REGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNIL 304
Query: 597 IHSLWKGMERKF 608
I L +G +KF
Sbjct: 305 IGGLCRG--KKF 314
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 238/521 (45%), Gaps = 12/521 (2%)
Query: 80 QNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWN 139
+ ++ LL L ++ VL R Q D AL FF W + Y ++ +L+
Sbjct: 162 EGQMRNLLRSLKPSQVCAVL-RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKT 220
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
+ ++L + + + + F ++ +Y + G +R++ K
Sbjct: 221 KLCQGSRRVLVLMKR--RGIYRTPEAFSRVMV-------SYSRAGQLRDALKVLTLMQRA 271
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+++ CN ++ ++ N +++ + E M +GI PN T+N + +C V++
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMN 318
LE + +G PD V+Y T++ CK+ R+ + L + M + + ++PD VTY TL++
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIH 391
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IY 377
L K EA +G D + Y+ ++ A CKEG+M E+K L+ EM+ G
Sbjct: 392 MLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD T +V G+ + G + A L+ + G + Y L+ +C+ + A +
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + + P+ Y+ +M L + +++A + EMV + P L+ C
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
GR+ EA M+E L G + +I+G+C +++ A ++L + D +
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
Y + + + G +++ EL K+ L G P +T + +IH
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 163/378 (43%), Gaps = 14/378 (3%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R GI F+ + + + G + L ++ G +P+L+ NT I + + R
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L A M ++P++VTY ++ G C +V EA +L M +G PD VSY T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 351 LIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ CKE ++ E + L+ +M +G+ PD T ++ K AL + + Q
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVAD 468
G I + Y ++ ALC++ R A L+ + G+ P + Y ++ C+ V
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L M KP+ +Y AL+ C G+S EA +M+ E P+S V+++
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 529 GYCMEK------DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
G E DV + L GFF +I N + DG + + + L
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEI------NLLLQSLCRDGRTHEARKFMEECL 586
Query: 583 RLGFAPNNLTCKYMIHSL 600
G A N + +IH
Sbjct: 587 NKGCAINVVNFTTVIHGF 604
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 178/375 (47%), Gaps = 3/375 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A K G + E+ + L G P +V+ ++NG +L +D+ ++ + M G
Sbjct: 427 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 486
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PNT ++ L + C+ G + + EE + P+ +TY+ ++ ++G+L++A +
Sbjct: 487 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 546
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R M + P V L+ LC++G+ EA + +++G + ++V++ T+I +C+
Sbjct: 547 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ + S+L +M + D FT +V GK+GR+ A L+ ++ G+ +
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 666
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y +I CQ + ++LE++ + IYN+++E LC + +A L +++
Sbjct: 667 YRTVIHRYCQMGKVDDLVAILEKMISRQKCRT--IYNQVIEKLCVLGKLEEADTLLGKVL 724
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ T AL+ + G A + M ++PD ++C L ++ V+
Sbjct: 725 RTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVD 784
Query: 538 KAEALLGFFAKKFQI 552
+A+ L+ ++ I
Sbjct: 785 EADKLMLRLVERGHI 799
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 11/287 (3%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y +I+H L K S A ++ E+V L P V++ L S D
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMV-LKGFFPGPVEINLLLQSLCRD-------- 572
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E+ K + L+ G ++V+ +++G + + +D V ++M I + T+
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L K G + + ++K+ +G DP VTY T+I YC+ G+++D + M
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + Y ++ LC GK+ EA L +++ D + L+ Y K+G
Sbjct: 693 RQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLS 750
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+ + M + PD C+ + + +G++ A L++ L G
Sbjct: 751 AYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 12/217 (5%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
N+ ++H N++ A+ +L ++ + K V + L+ K G I
Sbjct: 596 NFTTVIHGFCQNDELDAALSVLDDMYLINKHA--DVFTYTTLVD-------TLGKKGRIA 646
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + +K L G P+ V+ +++ ++ +D + E+M C +N +
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVI 704
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C G +++ + L K+ D T L+ Y KKG A+ + M+ RN++
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG-LSP 343
PD+ L L +GKV EA +L R+V RG +SP
Sbjct: 765 PDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISP 801
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 207/466 (44%), Gaps = 64/466 (13%)
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGI 236
W ++K GL+R+ F + +CN +LN + CI+ + + M ++
Sbjct: 210 WFFLKEGLVRK------------FPLDVTTCNIVLNSM----CIEGNLKGAKHMIHKMKS 253
Query: 237 C--PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
C PN T+N + H + K G LE +E+ G + D+ TYN +I CK R A
Sbjct: 254 CSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHA 313
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ L + M N+ PD TY TL+ G E K+ A +F+ M+ +GL P + +Y TLI
Sbjct: 314 YLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDG 373
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
YC+ G + E+ +LYEM G+ P T ++ G E A ++ ++++G S
Sbjct: 374 YCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHE-----AFSVYDNMEKYGC--S 426
Query: 415 RDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
D+Y Y L+ LC+ A + I + N L+ +C S+ +AL L
Sbjct: 427 PDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDL 486
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++MV N P + TY L+ FC G+ AV L+ MLE G++PD L+ G
Sbjct: 487 CEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIK 546
Query: 533 EKDVNKAEALL-------GFFAK--------------------KFQIYDTE--------- 556
E V A L G +A + IYD
Sbjct: 547 EGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPA 606
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
SYN + + + G LS+ + L K +R G P N+T + +I L K
Sbjct: 607 SYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSK 652
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 170/340 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K G + + T P+ S N L++G +K + + +Y++M R GI P
Sbjct: 579 GYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKP 638
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ +L K+G ++ FL+K+ EG PD ++++ LI+++ +K R++DA L+
Sbjct: 639 TNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLF 698
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P TY+ ++NGL ++ ++ + + MV GL P Y LI A C+
Sbjct: 699 NCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRF 758
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + L EM GI P IV+G K G++ + + + R G+ + +
Sbjct: 759 GDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATF 818
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC++ + A L + G + YN L+ LCK V+DAL L +EM
Sbjct: 819 TTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKS 878
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ ++P+++TY L G GR+ E L++++ + G++P
Sbjct: 879 KGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVP 918
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 193/446 (43%), Gaps = 40/446 (8%)
Query: 203 PSIV---SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
PS + + N LL G+ +D+ + E+M I P+ HT+ IL FC+ G +
Sbjct: 459 PSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPA 518
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMN 318
L+ + E+G PD+VTY L+ K+G++ A YL++ I+ + + D + Y ++MN
Sbjct: 519 VILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMN 578
Query: 319 GLCKEGK------------------------------VREAH-----QLFHRMVHRGLSP 343
G K GK +++ H L+ MV +G+ P
Sbjct: 579 GYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKP 638
Query: 344 DIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLV 403
V+Y LI K G ++ + L +M+ GIYPD + +++ + ++ R+ AL L
Sbjct: 639 TNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLF 698
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
++ +S S Y +I L + N + +L + + G P Y L+ + C+
Sbjct: 699 NCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRF 758
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ A LK+EM I P+ +++ G+ E + + ++ +GM+P
Sbjct: 759 GDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATF 818
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L++G C E ++ A L D +YN + + +S +EL +
Sbjct: 819 TTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKS 878
Query: 584 LGFAPNNLTCKYMIHSLWKGMERKFQ 609
G PN T + +++ G R +
Sbjct: 879 KGLRPNVTTYTTLTEAIY-GTGRTLE 903
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 190/471 (40%), Gaps = 89/471 (18%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
YC+ IL S AM +L L C VF L+ C+ + L+
Sbjct: 107 YCMAAQILTQAKMHSQAMSLLKHLAMTGFSCS---AVFSSLLCTISRCDSNPLVFDLLVN 163
Query: 189 SFKTFRKTLDV----------GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++ ++ +D GF+ S +CN +LN L+++ W
Sbjct: 164 AYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVW------------- 210
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
F K G V K F D+ T N +++S C +G L A ++
Sbjct: 211 ----------FFLKEGLVRK------------FPLDVTTCNIVLNSMCIEGNLKGAKHMI 248
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + LP+++TY T+++ K+G+ + A + M G+ D+ +YN +I CK
Sbjct: 249 HKM-KSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKM 307
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + LL M G+ + PD T +++G+ E +++ A+++ E+ R G+
Sbjct: 308 KRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLK------ 361
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
PSL Y L++ C+ ++ +AL + EM
Sbjct: 362 -----------------------------PSLATYTTLIDGYCRNGTIDEALRVLYEMQV 392
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KPS TY A++ G EA S+ D M + G PD R L+ G C + +
Sbjct: 393 AGVKPSEVTYSAMLN-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQ 447
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A+ + D ++ NA+ G L + ++L ++ + + F P+
Sbjct: 448 AKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPD 498
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G+I + K K + G P +S + L+N + + + Q++ M + + P++
Sbjct: 652 KHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSK 711
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + + + + L + E G +P Y LI++ C+ G +N AF L M
Sbjct: 712 TYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEM 771
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++P V ++++ GL K GKV E +F ++ G+ P I ++ TL+ CKE K+
Sbjct: 772 TALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKI 831
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ L M G+ D T +++ G K + AL L E++ G+ + Y L
Sbjct: 832 SDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTL 891
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPS 449
A+ R LL I G VPS
Sbjct: 892 TEAIYGTGRTLEGEKLLNDIEDRGLVPS 919
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 218/455 (47%), Gaps = 25/455 (5%)
Query: 92 AHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
+H+ + L++ + D AL FN V + ++ Y I+ LA N F ++L +
Sbjct: 92 SHDSAIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQ 151
Query: 152 LVELVKDCPHSVDVFQDLI------SCTEDCNWAYVKVG-LIRESFKTFRKTLDVGFQPS 204
+ + C +F +L+ S E AY + ++RE +PS
Sbjct: 152 MT--YETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVRE-------------KPS 196
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ + LN LL N +D ++ R + PN FNIL CKNGD+D +
Sbjct: 197 PKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIV 256
Query: 264 EKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNGLC 321
E++ F P+LVTY+TL+ C+ GR+ +AF L+ M R+ ++PD +TY L+NG C
Sbjct: 257 EEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFC 316
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
+ GK A + M G P++ +Y+ L+ CK GK++++K +L E+ G+G+ PD
Sbjct: 317 RGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAV 376
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ + G+ A+ L+ E++ G ++ L+ LC++ + A ++E++
Sbjct: 377 TYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKL 436
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
Q G + Y ++ SL + + A L M+ R +P +T L+ C C G
Sbjct: 437 PQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMV 496
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+A + +++E G P + VLI C E+ +
Sbjct: 497 DDAAVALFDLVEMGFQPGLETWEVLIGLICRERKL 531
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 182/392 (46%), Gaps = 45/392 (11%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP+ +++L +N+ A K+L + P +V VF L+ + K
Sbjct: 194 KPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKP-NVCVFNILVK-------YHCK 245
Query: 183 VGLIRESFKTFRKTLDVGFQ-PSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGICPNT 240
G + +F+ + + F P++V+ + L++GL + + + + ++EEM R I P+
Sbjct: 246 NGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDP 305
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N+L + FC+ G D+ ++ ++ G P++ Y+ L+ CK G+L DA +
Sbjct: 306 LTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAE 365
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + PD VTYT+L+N LC+ GK EA +L M G D V++N L+ C+EGK
Sbjct: 366 IKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGK 425
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+E AL++V +L + GV +++ Y
Sbjct: 426 FEE-----------------------------------ALDMVEKLPQQGVYLNKGSYRI 450
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
++ +L Q A LL + + G+ P NEL+ LCK V DA + ++V+
Sbjct: 451 VLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMG 510
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+P L T+ LI C + L+DE++
Sbjct: 511 FQPGLETWEVLIGLICRERKLLYVFELLDELV 542
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 15/305 (4%)
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLF-HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
P +T +N L +V A +L H P++ +N L+ +CK G + +
Sbjct: 195 PSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFE 254
Query: 367 LLYEMMGNGI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD-------IY 418
++ EM + YP+ T ++ G + GR+ A +L E+ +SRD Y
Sbjct: 255 IVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEM------VSRDHIVPDPLTY 308
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ +P A ++++ + +G P++ Y+ L++ LCK + DA + E+
Sbjct: 309 NVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKG 368
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+KP TY +LI C G+S EA+ L++EM E+G DS VL+ G C E +
Sbjct: 369 SGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEE 428
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++ ++ + SY V N + +L + EL LR GF P+ T ++
Sbjct: 429 ALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLV 488
Query: 599 SLWKG 603
L K
Sbjct: 489 CLCKA 493
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/454 (25%), Positives = 202/454 (44%), Gaps = 36/454 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ES +D G+ P ++ C L+ G I + +V E + R G P+
Sbjct: 81 RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGK-PDVF 139
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N L F K ++ N L++++ GF PD+VTYN +I S+C +G+L+ A ++ +
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199
Query: 302 YRRNVLPDLVTYTTLMN-----------------------------------GLCKEGKV 326
+ N P ++TYT L+ G+CKE V
Sbjct: 200 LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMV 259
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A +L + RG PDI++YN L+ GK E + L+ EM+ G P+ T I+
Sbjct: 260 DKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSIL 319
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ ++G++ A+NL+ ++ G+ YD LI C++ R AT LE + DG
Sbjct: 320 IGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGC 379
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P + YN +M LC+ AL + +++ + P++S+Y L G A+
Sbjct: 380 LPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALE 439
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ ++L G+ PD LI+ C + V++A LL + SYN +
Sbjct: 440 MILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLC 499
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +E+ G PN T +I +
Sbjct: 500 KVNRANDAIEVLAAMTEKGCQPNETTYILLIEGI 533
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 192/403 (47%), Gaps = 8/403 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++K + + + + GF P +V+ N ++ +D +++EE+ + P
Sbjct: 147 GFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEP 206
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ IL +G +D L+++ +G +PD +TYN +I CK+ ++ AF L
Sbjct: 207 TVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELL 266
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + R PD++TY L+ L GK E +L M+ G P++V+++ LI C++
Sbjct: 267 RSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRD 326
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS--RD 416
GK++E+ +LL M G+ PD + ++ G+ +EGR L+L E + +S D
Sbjct: 327 GKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR----LDLATEFLEYMISDGCLPD 382
Query: 417 IYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
I +Y ++ LC+ + A + E++ + G P++ YN L +L AL +
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
+++++ I P TY +LI C C G EA+ L+ +M P+ +++ G C
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
N A +L +K + +Y + G ++ MEL
Sbjct: 503 RANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 169/356 (47%), Gaps = 1/356 (0%)
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
C+ G ++ FLE + ++G+ PD++ LI + + A + I+ R PD+
Sbjct: 80 CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGK-PDV 138
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
Y L++G K ++ A+++ RM RG PD+V+YN +I ++C GK+ + + E
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
++ + P T I+++ +G + A+ L+ E+ G+ Y+ +I +C++
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
A LL + G P + YN L+ +L ++ L EM+ KP++ T+
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
LI C G+ EAV+L+ M E G+ PD+ LI G+C E ++ A L +
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+ D +YN + G + +E+ ++ +G PN + + +LW +R
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 10/299 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP Y +++ L K+S K++ E++ + C +V LI +
Sbjct: 275 KPDIITYNILLRTLLSRGKWSEGEKLISEMISI--GCKPNVVTHSILIG-------TLCR 325
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E+ R + G +P + L+ G + +D + E M G P+
Sbjct: 326 DGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVN 385
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + C+ G D+ EK++E G P++ +YNTL S+ G A + +
Sbjct: 386 YNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLL 445
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + PD +TY +L++ LC++G V EA +L M P++VSYN ++ CK +
Sbjct: 446 NQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAN 505
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ +L M G P+ T ++++G G G A+ L L +IS D ++ L
Sbjct: 506 DAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMN-AISEDSFNRL 563
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 208/449 (46%), Gaps = 42/449 (9%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A VK+G ++ + + F P++ N L+ GL K I +++ EM + P
Sbjct: 75 AAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVP 134
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND----- 293
N TFN L +CK G+VD G E++++E +P ++T+N+L+S CK R+ +
Sbjct: 135 NRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCML 194
Query: 294 -------------------------------AFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
A LYR + V D T + L+NGLCK
Sbjct: 195 NEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
EGKV +A ++ +V GL P V YNT++ YC+ G M + + +M G+ P+
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA---LCQDNRPFAATSLLE 439
++ + + + A V ++ G++ S + Y+ LI LC +R F +LE
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF---QILE 371
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++G P++ Y L+ LCK + +A ++ +MV R + P+ + Y LI C +G
Sbjct: 372 EMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVG 431
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ EA+ DEM ++G+ LI G C + +AE + D +YN
Sbjct: 432 KLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYN 491
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
++ + ++ G+ K +EL + +LG P
Sbjct: 492 SLISGYSNAGNSQKCLELYETMKKLGLKP 520
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 203/444 (45%), Gaps = 34/444 (7%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
+R+ + G + +C+ LLNGL K +++ +V + + G+ P +N + + +C+
Sbjct: 230 YREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQ 289
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD+D+ +E++E G P+ + +N++I +C+ ++ A + M + + P + T
Sbjct: 290 IGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVET 349
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y L++G + Q+ M G P+++SY +LI CK+GK+ E++ +L +M+
Sbjct: 350 YNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMV 409
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G G+ P+ +++ G G+L AL E+ + G+ + Y+ LI LC+ +
Sbjct: 410 GRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLK 469
Query: 433 AATSLLERIGQDGYVPSLEIYN----------------ELMESL---------------- 460
A + I G+ P + YN EL E++
Sbjct: 470 EAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLI 529
Query: 461 --CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C + + L +EM+ N+ P Y A+I C+ G +A SL EM++ G+ P
Sbjct: 530 SGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRP 589
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D++ LI G+ E +++ + L+ K I + ++Y+ + + D +
Sbjct: 590 DNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWY 649
Query: 579 KRFLRLGFAPNNLTCKYMIHSLWK 602
+ L GF PN C + L K
Sbjct: 650 REMLENGFLPNVCICNELSTGLRK 673
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 190/401 (47%), Gaps = 21/401 (5%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G PS ++ L++ D +++EM +G P+ + K GD+
Sbjct: 26 GRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLA 85
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
E ++ P++ YN LI CK+ R+ DA L+ M RN++P+ VT+ TL++G
Sbjct: 86 MELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDG 145
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK G+V A L RM + P I+++N+L+ CK +++E++ +L E+ NG PD
Sbjct: 146 YCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPD 205
Query: 380 TFTCQIIVQGYGK-EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
FT II G K + +AL+L E GV I L+ LC++ + A +L
Sbjct: 206 GFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVL 265
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + + G VP IYN ++ C+ + A+L ++M R ++P+ + ++I FC +
Sbjct: 266 KSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEM 325
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE-- 556
+A + +M+ G+ P + +LI+GY L F++ FQI +
Sbjct: 326 QMIDKAEEWVKKMVGKGIAPSVETYNILIDGY----------GRLCVFSRCFQILEEMEE 375
Query: 557 --------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
SY ++ N +DG + + + + + G PN
Sbjct: 376 NGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPN 416
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 175/363 (48%), Gaps = 1/363 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ ++ +I ++ + +K + G PS+ + N L++G +L +C+Q+ EEM G PN
Sbjct: 322 FCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPN 381
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK+G + + L + G P+ YN LI C G+L +A +
Sbjct: 382 VISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFD 441
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + +VTY +L+ GLCK GK++EA ++F + G PD+++YN+LI Y G
Sbjct: 442 EMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAG 501
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
Q+ L M G+ P T ++ G KEG L L E+ + +S R +Y+
Sbjct: 502 NSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKE-TLFNEMLQMNLSPDRVVYN 560
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I + A SL + + G P + YN L+ K +++ L D+M +
Sbjct: 561 AMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ P TY LI C + A EMLE+G LP+ IC L G + + +A
Sbjct: 621 GLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEA 680
Query: 540 EAL 542
+++
Sbjct: 681 QSI 683
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 186/411 (45%), Gaps = 1/411 (0%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F++ + +GF+P + + +KL + +++E M R + PN +N+L CK
Sbjct: 54 FKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCK 113
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
+ ++ P+ VT+NTLI YCK G ++ A L M + V P ++T
Sbjct: 114 EKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIIT 173
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY-EM 371
+ +L++GLCK ++ EA + + + G PD +Y+ + K + LY E
Sbjct: 174 FNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREA 233
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+G G+ D +TC I++ G KEG++ A ++ L G+ IY+ ++ CQ
Sbjct: 234 IGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDM 293
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A +E++ G P+ +N +++ C+ + A +MV + I PS+ TY L
Sbjct: 294 DRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNIL 353
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I + + +++EM E+G P+ LIN C + + +AE +L +
Sbjct: 354 IDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGV 413
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + YN + + G L + + + G +T +I L K
Sbjct: 414 LPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 190/399 (47%), Gaps = 2/399 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLN-CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
GF P + + + +GLLK + +Y E G+ + +T +IL + CK G V+K
Sbjct: 201 GFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEK 260
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L+ + E G P V YNT+++ YC+ G ++ A M R + P+ + + ++++
Sbjct: 261 AEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVID 320
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
C+ + +A + +MV +G++P + +YN LI Y + +L EM NG P
Sbjct: 321 KFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKP 380
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ + ++ K+G++L A ++ ++ GV + +IY+ LI C + A
Sbjct: 381 NVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFF 440
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + ++G ++ YN L++ LCK + +A + + P + TY +LI +
Sbjct: 441 DEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNA 500
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
G S + + L + M + G+ P LI+G C ++ + E L + D Y
Sbjct: 501 GNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVY 559
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
NA+ + + E G + K LQK + +G P+N T +I
Sbjct: 560 NAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLI 598
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 176/366 (48%), Gaps = 14/366 (3%)
Query: 115 WVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
WVK + I P+ Y +++ FS ++L E+ E + P+ + + LI+C
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEE-NGEKPNVIS-YGSLINC 391
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G I E+ R + G P+ N L++G + + + + ++EM
Sbjct: 392 -------LCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMS 444
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+ GI T+N L CK G + + I G PD++TYN+LIS Y G
Sbjct: 445 KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQ 504
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
LY M + + P + T+ L++G KEG ++ LF+ M+ LSPD V YN +I
Sbjct: 505 KCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMI 563
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
Y + G +Q++ SL EM+ G+ PD T ++ G+ KEG+L +LV +++ G+
Sbjct: 564 HCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLI 623
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKCDSVADALL 471
D Y LI C D + F + R + ++G++P++ I NEL L K + +A
Sbjct: 624 PEADTYSLLIQGHC-DLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682
Query: 472 LKDEMV 477
+ EM+
Sbjct: 683 ICSEMI 688
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 36/230 (15%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G ++E+ + F G P +++ N L++G +C ++YE M ++G+ P +
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF+ L K G K F E ++ PD V YN +I Y + G + AF L + M
Sbjct: 524 TFHPLISGCSKEGIKLKETLFNEMLQMN-LSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC----- 356
V PD TY +L+ G KEGK+ E L M +GL P+ +Y+ LI +C
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDF 642
Query: 357 ------------------------------KEGKMQESKSLLYEMMGNGI 376
K+G++QE++S+ EM+ NG+
Sbjct: 643 NGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANGM 692
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 2/254 (0%)
Query: 351 LIFAYCKEGKMQESKSLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ + C E KM S LY+ M G P ++IV+ + + + L+L E+
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G + +Y ++A + A L E + + VP++ +YN L+ LCK + DA
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L EM RN+ P+ T+ LI +C G A+ L + M + + P L++G
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN-MFAEDGDLSKLMELQKRFLRLGFAP 588
C + + +A +L + D +Y+ +F+ + D ++L + + G
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 589 NNLTCKYMIHSLWK 602
+N TC +++ L K
Sbjct: 241 DNYTCSILLNGLCK 254
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 204/449 (45%), Gaps = 46/449 (10%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-----P 238
G+ E++K R+ ++ G PS N ++ GLL+ D+ W+ + +G + + P
Sbjct: 340 GMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLR----DKRWK--DAIGLLKLVVDTGVP 393
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L H CK+ + + +K++E G P +VTY++L+ YC+KGR+++A LY
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P+ VTYTTLM G K+ A+ L + M G+S +YN LI
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E +L + G P T T I+ G+ K G + SA + ++++ G++ + Y
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA-----LLLK 473
I C+ N A LL + +DG P + YN +++ CK +++ A LLLK
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLK 633
Query: 474 D------------------------------EMVDRNIKPSLSTYRALICCFCGIGRSGE 503
D M+ + + Y LI F +G
Sbjct: 634 DGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAF 693
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A+ L EM+ + ++PD + L +G C D++ A+ LL + + +YN + N
Sbjct: 694 ALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLIN 753
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
DG L + +L L G P++ T
Sbjct: 754 ACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 186/403 (46%), Gaps = 9/403 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++H L + K A+ + ++ E S+ + L+ Y +
Sbjct: 393 PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKE--AGVKPSIVTYHSLL-------LGYCEK 443
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ K + + D GF P+ V+ L+ G +K D + + EM + G+ +T+
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL + V +V+ L++ EGF P +TYN++I+ + K G + AF +YR M +
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P++VTYT+ ++G C+ A +L + G+ PDI +YN I +CK+G M
Sbjct: 564 KGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSR 623
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L ++ +G+ PD V GY + A + + V +IY LI
Sbjct: 624 ALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLID 683
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ A L + + +P + + L LC+ + A L D+M ++ P
Sbjct: 684 GFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSP 743
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
++ TY LI G+ EA L DEML SG++PD +L
Sbjct: 744 NIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 193/439 (43%), Gaps = 36/439 (8%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L G + +V L++G + + +++E+ G+ P T+ +L G
Sbjct: 283 LATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMT 342
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D+ ++ E+G P +N +I + R DA L +++ V PD+ TY L
Sbjct: 343 DETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCL 401
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++ LCK K+ EA L+ +M G+ P IV+Y++L+ YC++G+M E+ L EM G
Sbjct: 402 IHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGF 461
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ T +++GY K+ +A L+ E+++ GVS Y+ LI L NR
Sbjct: 462 PPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDE 521
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY-------- 488
+L+R +G+VP+ YN ++ K + A + +M + I P++ TY
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581
Query: 489 ---------------------------RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
A I FC G A+ + +L+ G+ PD
Sbjct: 582 RTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVT 641
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
+ + GY K + +A K+ + DTE Y + + F++ G+++ +EL
Sbjct: 642 VYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEM 701
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ P++ T + H L
Sbjct: 702 MANHVIPDDKTFTALTHGL 720
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 185/370 (50%), Gaps = 6/370 (1%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++++EM G+ P+ + I CK D D+ L K+ E GF+P +TY++++
Sbjct: 206 RLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVL 265
Query: 286 CKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
K R+++A L +++ D+V T LM+G C G+V +A LF +V G++P
Sbjct: 266 VKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPT 325
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
V+Y LI EG E+ L +M+ G+ P T+ ++++G ++ R A+ L+
Sbjct: 326 NVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLK 385
Query: 405 ELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ GV D++ Y LI LC+ + A +L +++ + G PS+ Y+ L+ C+
Sbjct: 386 LVVDTGVP---DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCE 442
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +AL L EM D+ P+ TY L+ + A +L++EM ++G+
Sbjct: 443 KGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYT 502
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
+LING M V + + +L F + + T +YN++ N F + G + + ++
Sbjct: 503 YNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMR 562
Query: 583 RLGFAPNNLT 592
+ G PN +T
Sbjct: 563 KKGITPNIVT 572
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 168/412 (40%), Gaps = 37/412 (8%)
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
Y M G+ P+ + L +++ +G D Y+ +I + +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP---- 343
G DA L+ M V PD Y ++GLCK A Q+ +M G P
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257
Query: 344 --------------------------------DIVSYNTLIFAYCKEGKMQESKSLLYEM 371
D+V L+ YC G++ ++ L E+
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ +G+ P T ++++G EG L ++ G+ S ++ +I L +D R
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A LL+ + G VP + Y L+ LCK + +A+ L D+M + +KPS+ TY +L
Sbjct: 378 KDAIGLLKLVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
+ +C GR EA+ L EM + G P+ L+ GY +K + A ALL +
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+YN + N + ++ E+ KRFL GF P +T +I+ K
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKA 548
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 210/434 (48%), Gaps = 20/434 (4%)
Query: 170 ISCTEDC----NWAYVKVGLIRESFKTF-RKTLDVG----FQPSIVSCNFLLNGLLKLNC 220
+ CTE A+ + G + KTF R D+G +P + N L++ LL+ N
Sbjct: 86 VPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLY--NHLIDALLRENM 143
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ VY+ M + G+ PN T+N+L C+N V L+++ +G PD VTY T
Sbjct: 144 VGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYAT 203
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
++S CK RL++A + M P +Y ++ LC+E +++E + MV RG
Sbjct: 204 IVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 258
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L P++++Y T++ A+CK G+++ + ++L M+ G P+ T +V+G +GR+ AL
Sbjct: 259 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 318
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + G + S Y+ LI LC A+S+L + Q G P++ Y+ L++
Sbjct: 319 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 378
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
K + A+ + ++M KP++ Y ++ FC +A SL+D+ML P++
Sbjct: 379 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 438
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD----LSKLME 576
LI C + V +A + + + + +YN + + +G+ L + E
Sbjct: 439 VTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE 498
Query: 577 LQKRFLRLGFAPNN 590
+Q + L N
Sbjct: 499 MQSHGIELSLVTYN 512
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 134/560 (23%), Positives = 232/560 (41%), Gaps = 95/560 (16%)
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
+P P L H I LLR L + N K+ + P Y L+V L NN+
Sbjct: 124 RPTEPRLYNHLID-ALLRENMVGAVVLVYDNMRKDG--VHPNVFTYNLLVRALCQNNRVG 180
Query: 144 FAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
A KML E+ K CP P
Sbjct: 181 AARKMLDEMAR--KGCP------------------------------------------P 196
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
V+ +++ L KL+ +D+ +V M P ++N + C+ + +V +
Sbjct: 197 DDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVV 251
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ G P+++TY T++ ++CK G L A + M P++VT+T L+ GL +
Sbjct: 252 SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDD 311
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+V +A ++ MV G +P VSYN LI C G ++ + S+L M +G +P+ T
Sbjct: 312 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY------------------------- 418
++ G+ K G L A+++ ++ R G + +Y
Sbjct: 372 STLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 431
Query: 419 ----------DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ LI +LC R A + + + G VP+ YNEL+ L + + D
Sbjct: 432 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGD 491
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
AL + EM I+ SL TY ++ C S EA+ + +M+ G+ P++ +I+
Sbjct: 492 ALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIH 551
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN-MFAEDGDLSKLMELQKRFLRL--- 584
YC E +V A +LG + + V+ + AE + KL++ L++
Sbjct: 552 AYCKEGEVRMAAWMLG----AMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYE 607
Query: 585 GFAPNNLTCKYMIHSLWKGM 604
G PN +T ++ +++ +
Sbjct: 608 GIYPNTVTWNVLVRGVFRNL 627
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 153/349 (43%), Gaps = 12/349 (3%)
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYRIMY----RRNVLP 308
GDVD V L+++ G + ++ + G + A YR ++ R P
Sbjct: 69 GDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEP 128
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
L Y L++ L +E V ++ M G+ P++ +YN L+ A C+ ++ ++ +L
Sbjct: 129 RL--YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKML 186
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G PD T IV K RL A ++ + S Y+ +++ALC++
Sbjct: 187 DEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAAS-----YNAIVLALCRE 241
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R S++ + G P++ Y ++++ CK + A + MV P++ T+
Sbjct: 242 FRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTF 301
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
AL+ GR +A+ + M+ G P + +LI G C D+ A ++L +
Sbjct: 302 TALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ 361
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +Y+ + + F++ GDL + + R G PN + M+
Sbjct: 362 HGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMV 410
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 188/372 (50%), Gaps = 11/372 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + S A K L ++V K + VF ++ T+ +
Sbjct: 8 RHTLHSYCTMIHFLCTHQMLSEA-KSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYV 66
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R T + F + +C +L L+KL W Y+E+
Sbjct: 67 FSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEIL 126
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL FCK GD+ L I + G P +V++NTLI+ Y + G L+
Sbjct: 127 ECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLD 186
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M+ V PD+ TY+ L+NGLCKE K+ +A++LF M+ +G+ P+ V++ TLI
Sbjct: 187 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLI 246
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK G++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 247 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLK 306
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ Q+ +Y L+ LC+ DA +
Sbjct: 307 PDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKM 366
Query: 473 KDEMVDRNIKPS 484
EM+ +KP+
Sbjct: 367 LREMLSVGLKPN 378
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+++G + E F+ G QP + + + L+NGL K + +D ++++EM G+ P
Sbjct: 178 GYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVP 237
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N TF L CKNG VD +++ + PDL+TYNTLI CKKG L A L
Sbjct: 238 NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLI 297
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + PD +TYTTL++G CKEG + A + RM+ + D V Y LI C+E
Sbjct: 298 DEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQE 357
Query: 359 GKMQESKSLLYEMMGNGIYPDT 380
G+ +++ +L EM+ G+ P+T
Sbjct: 358 GRSVDAEKMLREMLSVGLKPNT 379
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 136/331 (41%), Gaps = 36/331 (10%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYR---- 303
V + G F +E +G D+ ++ LI++Y + G L DA YR+
Sbjct: 37 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFW 96
Query: 304 ------RNVLPDLVT-------------------------YTTLMNGLCKEGKVREAHQL 332
R VL L+ + LM CKEG +R A +
Sbjct: 97 VPLDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGDIRVAQLV 156
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+ + GL P +VS+NTLI Y + G + E L M +G+ PD +T +++ G K
Sbjct: 157 LNAITKWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCK 216
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
E ++ A L E+ G+ + + LI C++ R A + +++ P L
Sbjct: 217 ESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLIT 276
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LCK + A L DEM +KP TY LI C G A M+
Sbjct: 277 YNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMI 336
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ + D + LI+G C E AE +L
Sbjct: 337 QENIRLDDVVYTALISGLCQEGRSVDAEKML 367
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%)
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY SL +N LM+ CK + A L+ + + ++PS+ ++ LI + +G E
Sbjct: 129 GYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEG 188
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M SG+ PD VLING C E ++ A L K + + ++ + +
Sbjct: 189 FRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDG 248
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
++G + ME+ K+ L +P+ +T +I+ L K E K
Sbjct: 249 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELK 291
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 198/423 (46%), Gaps = 4/423 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G R+ + FR+ L++G P++V+ ++GL K + Q + V EEM G+ PN
Sbjct: 230 FCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPN 289
Query: 240 THTFNILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T L + CK G ++ FL+ I+ + P++ TY +I YCK+G+L A L
Sbjct: 290 VYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLL 349
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P+ TYTTL++G CKEG A +L ++M G P+I +YN LI CK+
Sbjct: 350 GRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKK 409
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+QE+ +L G+ D T +++ + K+G + AL+L + G Y
Sbjct: 410 GKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTY 469
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI CQ + + L ++ VP+ + Y ++ CK AL + + MV
Sbjct: 470 TTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQ 529
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ TY ALI C R EA +L + ML+ ++P L YC +
Sbjct: 530 NGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVV 589
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A ++L K+ + + N + + G + K+ L + A + L I+
Sbjct: 590 AVSILDRLDKRRK---NHTVNVLVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFIN 646
Query: 599 SLW 601
S +
Sbjct: 647 SCY 649
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 175/337 (51%), Gaps = 6/337 (1%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C AYVK ++F + + G +P++ + L+NGL K+ ++ ++++ ++ +
Sbjct: 266 CKRAYVK-----QAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSS 320
Query: 236 -ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
PN HT+ ++ +CK G + + L ++ E+G P+ TY TLIS +CK+G N A
Sbjct: 321 SYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCA 380
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
F L M R P++ TY L++GLCK+GK++EA+++ ++GL D V+Y +I
Sbjct: 381 FELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITE 440
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+CK+G + + L M NG +PD T ++ Y ++ ++ + L + + +
Sbjct: 441 HCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPT 500
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ Y +I C+ + +A + ER+ Q+G Y L+ LCK + +A L +
Sbjct: 501 KQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYE 560
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
M+D+ + P T L +C ++ AVS++D +
Sbjct: 561 GMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRL 597
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 208/426 (48%), Gaps = 2/426 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGIC 237
A+ + G + E+ + G + + N++L L +V++ M R G+
Sbjct: 123 AFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLL 182
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ +F L C++G +++V+ L ++ +GF D T ++ +C+KGR D L
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
+R M P++V YT ++GLCK V++A + MV +GL P++ ++ +LI CK
Sbjct: 243 FRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCK 302
Query: 358 EGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
G + + L +++ + Y P+ T +++ GY KEG+L A L+ + G++ + +
Sbjct: 303 IGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 362
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI C++ A L+ ++ ++G+ P++ YN L++ LCK + +A +
Sbjct: 363 TYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMA 422
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
++ ++ TY +I C G A+ L + M E+G PD LI YC ++ +
Sbjct: 423 NNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQM 482
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+++ L + ++Y ++ + + G + + + +R ++ G +++T +
Sbjct: 483 EESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGAL 542
Query: 597 IHSLWK 602
I L K
Sbjct: 543 ISGLCK 548
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 159/387 (41%), Gaps = 32/387 (8%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P + +HV G VD G L D +V ++L S L
Sbjct: 32 PPPRVSDAASHV-SSPGAVDTDPGALAP------DDAIVALSSLADSAGSAAALE---LF 81
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV-------------------- 337
R+ R++V + Y T G + AH+ RMV
Sbjct: 82 RRLASRQDVRHLMRLYVTAATTFVDRGSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMR 141
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRL 396
GL + + N ++ A G ++ + M+ G+ PD + + ++ G ++GR+
Sbjct: 142 SHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRM 201
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L+ +Q G + ++ CQ R + L R+ + G P++ Y
Sbjct: 202 EEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAW 261
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK V A + +EMV + +KP++ T+ +LI C IG + A L ++++S
Sbjct: 262 IDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSS 321
Query: 517 L-PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
P+ V+I GYC E + +AE LLG ++ +T +Y + + ++G +
Sbjct: 322 YKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAF 381
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL + R GF PN T +I L K
Sbjct: 382 ELMNKMRREGFQPNIYTYNALIDGLCK 408
>gi|356546358|ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Glycine max]
Length = 577
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 187/392 (47%), Gaps = 38/392 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+GL+ ++ R+ L+ G +P+ + N L+ G +N +D+ ++ M GI PN
Sbjct: 166 KIGLLDKADLVVREMLEFGPRPNCATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRV 225
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKI---EEEGFDPDLV---------------------- 276
T IL H C+ G + + LE++ ++E PDLV
Sbjct: 226 TCRILVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLW 285
Query: 277 -------------TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
YN LI+ +CK ++N A+ M+++ +LPD TY ++ LCKE
Sbjct: 286 NQMLQNCTKVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKE 345
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK+ EA M + G+ PD ++Y +I C G++ +K LL+ M+ N + P
Sbjct: 346 GKISEACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIW 405
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+I+ YG+ L +A ++ FGV + Y+ LI+A + A SL E +
Sbjct: 406 NLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYNALILAQVKSGNFHGACSLKEEMIS 465
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P + YN L+ + C + ALLL D+MV R +P L TY L+ FC G+ E
Sbjct: 466 KCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYTELVRGFCIRGKMKE 525
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
A L ++L+SG+L D ++L N YC K+
Sbjct: 526 AEELYAKILKSGLLNDHVPVQILFNKYCKLKE 557
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 171/414 (41%), Gaps = 73/414 (17%)
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++ +M + G+ + T N + + CK G +DK + + ++ E G P+ TYNTLI YC
Sbjct: 141 LWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCATYNTLIKGYC 200
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC------------------------- 321
++ A YL+ M +LP+ VT L++ LC
Sbjct: 201 AVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEVLKDDDEKDIP 260
Query: 322 -------------KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
K+G + +A L+++M+ D+V+YN LI +CK +M +
Sbjct: 261 DLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLINGFCKSQQMNLAYGYA 320
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM G+ PD FT II+ KEG++ A V + G+ + Y +I LC
Sbjct: 321 CEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMPDQITYQIVIRGLCFA 380
Query: 429 NRPFAATSLL-----------------------------------ERIGQDGYVPSLEIY 453
A LL +++ G P++ Y
Sbjct: 381 GEIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTY 440
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ + K + A LK+EM+ + + P + TY LI C IGR A+ L D+M++
Sbjct: 441 NALILAQVKSGNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQ 500
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
G PD L+ G+C+ + +AE L K + D +FN + +
Sbjct: 501 RGYEPDLITYTELVRGFCIRGKMKEAEELYAKILKSGLLNDHVPVQILFNKYCK 554
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 7/321 (2%)
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I C G+L A +L+ M ++ V+ D+ T+ ++NGLCK G + +A + M+ G
Sbjct: 126 IRRLCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGP 185
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P+ +YNTLI YC + + L M GI P+ TC+I+V ++G L+ A
Sbjct: 186 RPNCATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKR 245
Query: 402 LVVELQRFGVSISRDIYDYLIVAL-----CQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
++ E+ + +DI D +I + +D A +L ++ Q+ + YN L
Sbjct: 246 MLEEVLK--DDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVL 303
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ CK + A EM + + P TY +I C G+ EA + M G+
Sbjct: 304 INGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGI 363
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+PD +++I G C ++ +A+ LL + +N + +++ DLS
Sbjct: 364 MPDQITYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFF 423
Query: 577 LQKRFLRLGFAPNNLTCKYMI 597
+ + L G PN T +I
Sbjct: 424 TRDQMLSFGVCPNVFTYNALI 444
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 161/358 (44%), Gaps = 13/358 (3%)
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C +G + K+ ++G D+ T+N +++ CK G L+ A + R M P+
Sbjct: 129 LCLDGKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPN 188
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
TY TL+ G C V A LF M + G+ P+ V+ L+ A C++G + E+K +L
Sbjct: 189 CATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLE 248
Query: 370 EMMGNG---IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
E++ + PD + + Y K+G ++ ALNL ++ + + Y+ LI C
Sbjct: 249 EVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLINGFC 308
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ + A + + G +P YN ++ +LCK +++A M + I P
Sbjct: 309 KSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMPDQI 368
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
TY+ +I C G A L+ ML + M+P I ++I+ Y D++ A FF
Sbjct: 369 TYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNA-----FF 423
Query: 547 AKKFQIY-----DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ + + +YNA+ + G+ L++ + P+ +T +I +
Sbjct: 424 TRDQMLSFGVCPNVFTYNALILAQVKSGNFHGACSLKEEMISKCLFPDVVTYNLLIGA 481
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 135/329 (41%), Gaps = 49/329 (14%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELV--ELVKDCPHSV--DVFQDLISCTEDCN 177
I P ++VH L A +ML E++ + KD P V VF D
Sbjct: 220 ILPNRVTCRILVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMD--------- 270
Query: 178 WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
+Y K G I ++ + + L + +V+ N L+NG K ++ + EM + G+
Sbjct: 271 -SYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLL 329
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR------- 290
P+ T+NI+ CK G + + + + G PD +TY +I C G
Sbjct: 330 PDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHL 389
Query: 291 ----------------------------LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L++AF+ M V P++ TY L+ K
Sbjct: 390 LWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYNALILAQVK 449
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G A L M+ + L PD+V+YN LI A C G++ + L +M+ G PD T
Sbjct: 450 SGNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLIT 509
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGV 411
+V+G+ G++ A L ++ + G+
Sbjct: 510 YTELVRGFCIRGKMKEAEELYAKILKSGL 538
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G I E+ T ++G P ++ ++ GL I + + M + P
Sbjct: 341 ALCKEGKISEACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVP 400
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+N++ ++ + D+ +++ G P++ TYN LI + K G + A L
Sbjct: 401 KPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYNALILAQVKSGNFHGACSLK 460
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+VTY L+ C G++ A L +MV RG PD+++Y L+ +C
Sbjct: 461 EEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYTELVRGFCIR 520
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
GKM+E++ L +++ +G+ D QI+ Y K + A N
Sbjct: 521 GKMKEAEELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNF 564
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 99/280 (35%), Gaps = 40/280 (14%)
Query: 46 NPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSD 105
N L N ++Q N C KKG LLP + I L C+
Sbjct: 301 NVLINGFCKSQQMNLAYGYACEMFKKG-------------LLPDAFTYNIIIGAL-CKEG 346
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML-CELVELVKDCPHSVD 164
+S + V +++ I P Y +++ L + + A +L C L L+ P +
Sbjct: 347 KISEACYTVGVMSNMGIMPDQITYQIVIRGLCFAGEIVRAKHLLWCMLNNLMVPKPLIWN 406
Query: 165 VFQDLISCTEDCNWAY-------------------------VKVGLIRESFKTFRKTLDV 199
+ DL D + A+ VK G + + +
Sbjct: 407 LIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYNALILAQVKSGNFHGACSLKEEMISK 466
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
P +V+ N L+ + +D ++++M + G P+ T+ L FC G + +
Sbjct: 467 CLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYTELVRGFCIRGKMKEA 526
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
KI + G D V L + YCK AF Y+
Sbjct: 527 EELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNFYQ 566
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 227/480 (47%), Gaps = 16/480 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P Y +++ L + A KM E+ + + S+ + LI Y
Sbjct: 207 VRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNI--NLVGSIVTYNTLID-------GYC 257
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + +FK + + P+I++ N LL+GL K+ + + + +EM G P+ +
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL + D + E+ E+G + T + L++ CK+G++ A + +
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ D V Y T +NG C+ G + +A RM GL P+ +++N+LI +C +M
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ + +M G+ P T ++ GYGK ++ +++ GV + Y L
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+D + A +L + G +P+ ++YN L++ C V DAL DEM+ I
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI 557
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+L TY LI C G+ EA + ++ SG PD LI+GY +V+K
Sbjct: 558 SPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC-- 615
Query: 542 LLGFFA--KKFQIYDT-ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
LG + K I T +Y+ + + +++G + + +L L++ P+ + MIH
Sbjct: 616 -LGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIH 673
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 5/426 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + +K + G V N +NG ++ +++ E M G+ PN+
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L FC ++DK +++K+ E+G P + TYNTLI Y K + F + M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P++V+Y +L+N LCK+GK+ EA + M+ RG+ P+ YN LI C GK+
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ EMM + I P T +++ G K+G+L A + + ++ G S Y+ L
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I L E + G P++ Y+ L+ S C + + L +EM+ N+
Sbjct: 603 ISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLI-SGCSKEGIELVEKLYNEMLQMNL 661
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P Y A+I C+ IG + +A SL ML+ G+ PD LI G+ E ++ +
Sbjct: 662 LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKD 721
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L+ K ++Y+ + + D S + + F PN C + L
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASIC----NELT 777
Query: 602 KGMERK 607
G+E++
Sbjct: 778 AGLEQE 783
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 211/446 (47%), Gaps = 46/446 (10%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+K+G+ E + RK G +P++ N L+ GL + I ++++EM I + +
Sbjct: 192 LKMGM--EFLDSMRKR---GVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSI 246
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L +CK G++D E+++E+ P+++T+N+L+S CK ++ +A L +
Sbjct: 247 VTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKE 306
Query: 301 MYRRNVLPDLVTY-----------------------------------TTLMNGLCKEGK 325
M +PD TY + L+NGLCK+GK
Sbjct: 307 MEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGK 366
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V +A ++ + GL D V YNT + YC+ G M ++ + M G+ P++ T
Sbjct: 367 VEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNS 426
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA---LCQDNRPFAATSLLERIG 442
++ + + A V ++ GV+ S + Y+ LI LC +R F +LE++
Sbjct: 427 LIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF---QILEQME 483
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P++ Y L+ LCK + +A ++ +M+ R + P+ Y LI C +G+
Sbjct: 484 EIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVK 543
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A+ DEM+ S + P VLI+G C + + +AE L D +YN++
Sbjct: 544 DALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAP 588
+ +A G++SK + L + LG P
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKP 629
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 209/452 (46%), Gaps = 48/452 (10%)
Query: 191 KTFRKTLDV-------GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
K F K +D+ GF+ + +KL + + + M + G+ PN +
Sbjct: 155 KQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIY 214
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L C+ + +++ +VTYNTLI YCK G L+ AF + M
Sbjct: 215 NVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY--------------- 348
++V P+++T+ +L++GLCK K++EA L M G PD +Y
Sbjct: 275 KSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNG 334
Query: 349 --------------------NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
+ L+ CK+GK+++++ +L + NG+ D V
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY + G + A+ + ++ FG+ + ++ LI C A ++++ + G P
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
S+E YN L++ K + + ++M + +KP++ +Y +LI C C G+ EA ++
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK--KFQIYDT-ESYNAVFNMF 565
+M+ G+LP++Q+ +LI+G CM V K + L FF + + +I T +YN + +
Sbjct: 515 RDMICRGVLPNAQVYNMLIDGSCM---VGKVKDALRFFDEMMRSEISPTLVTYNVLIDGL 571
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ G L++ + + G +P+ +T +I
Sbjct: 572 CKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 170/351 (48%), Gaps = 5/351 (1%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
+K + G PS+ + N L++G KL D+C+Q+ E+M IG+ PN ++ L + CK+
Sbjct: 445 KKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKD 504
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G + + L + G P+ YN LI C G++ DA + M R + P LVTY
Sbjct: 505 GKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTY 564
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL-LYEMM 372
L++GLCK+GK+ EA ++ G SPD+++YN+LI Y G + SK L LYE M
Sbjct: 565 NVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV--SKCLGLYETM 622
Query: 373 GN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
N GI P T ++ G KEG L L E+ + + R +Y+ +I +
Sbjct: 623 KNLGIKPTVRTYHPLISGCSKEGIELVE-KLYNEMLQMNLLPDRVVYNAMIHCYAEIGNT 681
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A SL + + G P YN L+ + +++ L + M + + P TY L
Sbjct: 682 QKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDIL 741
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ C + A EM+E+ LP++ IC L G E + + + +
Sbjct: 742 VKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVI 792
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 14/365 (3%)
Query: 115 WVKNDLE--IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
WVK E + P+ Y ++ F ++L E +E + P+ V + LI+C
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQIL-EQMEEIGVKPNVVS-YGSLINC 500
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G I E+ R + G P+ N L++G + + + ++EM
Sbjct: 501 -------LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMM 553
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
R I P T+N+L CK G + + FL +I G PD++TYN+LIS Y G ++
Sbjct: 554 RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVS 613
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
LY M + P + TY L++G KEG + +L++ M+ L PD V YN +I
Sbjct: 614 KCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMI 672
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
Y + G Q++ SL M+ GI+PD T ++ G+ +EG+L + +LV ++ ++
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELA 732
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKCDSVADALL 471
D YD L+ C D + F+ + R + ++ ++P+ I NEL L + + + +
Sbjct: 733 PKADTYDILVKGHC-DLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791
Query: 472 LKDEM 476
+ EM
Sbjct: 792 ICSEM 796
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 178/430 (41%), Gaps = 55/430 (12%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
I + LL+ K + + ++YE M R G P+ + ++L KV
Sbjct: 106 ITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFM 165
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+IE GF D Y I + K L M +R V P++ Y L+ GLC+E
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG------------------------- 359
++R+A ++F M + L IV+YNTLI YCK G
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285
Query: 360 ----------KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
KM+E++SLL EM NG PD +T I+ G + A+ L +
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G+ I+ L+ LC+ + A +L++ ++G V IYN + C+ + A
Sbjct: 346 GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA 405
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+L + M ++P+ T+ +LI FC + +A + +M E G+ P + LI+G
Sbjct: 406 ILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDG 465
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYD----------TESYNAVFNMFAEDGDLSKLMELQK 579
Y L F + FQI + SY ++ N +DG + + + +
Sbjct: 466 Y----------GKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLR 515
Query: 580 RFLRLGFAPN 589
+ G PN
Sbjct: 516 DMICRGVLPN 525
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 138/298 (46%), Gaps = 8/298 (2%)
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
D Y + K ++ + M RG+ P++ YN LI C+E ++++++ +
Sbjct: 175 DTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMF 234
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM + T ++ GY K G L +A + ++ V+ + ++ L+ LC+
Sbjct: 235 DEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKM 294
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A SLL+ + +G++P Y+ L + L +CD A+ L ++ ++ I+ + T
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTG 354
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA----EALLG 544
L+ C G+ +A ++ + E+G++ D I +NGYC D+NKA E +
Sbjct: 355 SILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMES 414
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + I ++N++ + F + ++ K E K+ G P+ T +I K
Sbjct: 415 FGLRPNSI----TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGK 468
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--F 166
AL FF+ + EI PT Y +++ L K + A L + + HS DV +
Sbjct: 545 ALRFFDEMMRS-EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQ----ITSSGHSPDVITY 599
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LIS Y G + + + ++G +P++ + + L++G K I+ +
Sbjct: 600 NSLIS-------GYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEK 651
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+Y EM ++ + P+ +N + H + + G+ K + + ++G PD +TYN+LI +
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
++G+L++ L M + + P TY L+ G C A+ + MV P+
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
N L +EG++QE + + EM GI
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 228/510 (44%), Gaps = 52/510 (10%)
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
V A F +K E KP S + ++ N +L E+ ++ V V+
Sbjct: 181 VEAKELFKEMKGG-ECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKM--GLEGDVFVY 237
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
LIS + G I + F + L P++V+ + L+N L K + Q
Sbjct: 238 SALIS-------GFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQ 290
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
+ + M + P+ + +L KNG L+ + + G +P+ VTYN +I+ C
Sbjct: 291 MLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC 350
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR--GLSPD 344
K+GR++DA + M ++ PD+VTY+TL+ GLC GK+ EA L + ++ + + PD
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPD 410
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+ ++N +I CK+ +++ +K + Y M+ G + T I++ GY G+L AL L
Sbjct: 411 VFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWK 470
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ G+S + Y LI LC+ A L + G P++ YN LM SLC+
Sbjct: 471 DAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRES 530
Query: 465 SVADALLLKDEMVDRNIKPSLS-----------------------------------TYR 489
SV A L EM + N P + T+
Sbjct: 531 SVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFS 590
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
LI F +G+ EA SL + M+ G +PD+ + L+ GY ++ K ++L A K
Sbjct: 591 ILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650
Query: 550 FQIYDTESYNAVF----NMFAEDGDLSKLM 575
+ D++ + + NM ++D D+ K++
Sbjct: 651 DVVLDSKLTSTILACLCNM-SKDVDIEKIL 679
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 203/456 (44%), Gaps = 39/456 (8%)
Query: 186 IRESFKTFRKTLD--VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ ES F TL PS SCN L++ L K D V+ +M + + P +
Sbjct: 38 LSESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L F G L I + GF ++ +N L+ +C+ G + A L+ +M R
Sbjct: 98 SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++PD V+Y T++NGLCK ++ EA +LF M P+ V+++ LI +CK G ++E
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEE 217
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
LL EM G+ D F ++ G+ +G + L E+ R V+ + Y L+
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
ALC+ + A +L+ + P + Y L + L K +DA+ + D MV R +P
Sbjct: 278 ALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP 337
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY A+I C GR +A+ +++ M + G PD L+ G C +++A LL
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Query: 544 GFF-AKKFQI------------------------------------YDTESYNAVFNMFA 566
+K+F I + +YN + + +
Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYL 457
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G L+K +EL K + G +PN T +I+ L K
Sbjct: 458 SAGKLTKALELWKDAVDSGISPNAATYTVLINGLCK 493
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 226/517 (43%), Gaps = 33/517 (6%)
Query: 102 CQS-DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSF--AMKMLCELVELVKD 158
CQS DS A+ F +K + CLI +++N + K L E EL K+
Sbjct: 140 CQSGDSHKAMDLFCMMKRN----------CLIPDCVSYNTVINGLCKGKRLVEAKELFKE 189
Query: 159 C------PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
P+SV F LI + K G + E F + +G + + + L+
Sbjct: 190 MKGGECKPNSV-TFSALID-------GFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G I++ +++ EM R + PN T++ L + CK + L+ +
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PD+V Y L K GR +DA + +M +R P+ VTY ++NGLCKEG+V +A +
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN--GIYPDTFTCQIIVQGY 390
M +G PD+V+Y+TL+ C GK+ E+ LL +M I PD F +++Q
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K+ RL A + + G + Y+ LI + A L + G P+
Sbjct: 422 CKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNA 481
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y L+ LCK ++ A L ++ +P++S Y L+ C +A +L E
Sbjct: 482 ATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQE 541
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M + PD ++I+G DV A+ LL + D +++ + N F + G
Sbjct: 542 MRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQ 601
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
L + L +R + G P+ + + SL KG K
Sbjct: 602 LDEAASLYERMVSCGHVPDAV----LFDSLLKGYSLK 634
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 159/340 (46%), Gaps = 7/340 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP Y +V L K A+ +L L+ K+ DVF + E C K
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMS--KEFHIKPDVFAFNLVIQELC-----K 423
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+R + + + ++ GF +IV+ N L++G L + + +++++ GI PN T
Sbjct: 424 QRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ +L + CK + G K G P + YNTL++S C++ + A L++ M
Sbjct: 484 YTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMR 543
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
N PD+V++ +++G K G V A +L M++ L PD ++++ LI + K G++
Sbjct: 544 NANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLD 603
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ SL M+ G PD +++GY +G+ ++++ ++ V + + ++
Sbjct: 604 EAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
LC ++ +L + Q V + NEL+ L K
Sbjct: 664 ACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKLNK 703
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%)
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI + +P A +L I + G+ ++ +N L++ C+ A+ L M
Sbjct: 100 LIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
+ P +Y +I C R EA L EM P+S LI+G+C DV +
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL K D Y+A+ + F GD+ + EL LR PN +T ++++L
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 601 WKGMERK 607
K + K
Sbjct: 280 CKKQKWK 286
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 237/521 (45%), Gaps = 12/521 (2%)
Query: 80 QNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWN 139
+ ++ LL L ++ VL R Q D AL FF W + Y ++ +L+
Sbjct: 165 EGQMRNLLRSLKPSQVCAVL-RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKT 223
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
A ++L + + + + F ++ +Y + G +R++ K
Sbjct: 224 KMCQGARRVLVLMKR--RGIYRTPEAFLRVMV-------SYSRAGQLRDALKVLTLMQRA 274
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P+++ CN ++ ++ N +++ + E M +GI PN T+N + +C V++
Sbjct: 275 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 334
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMN 318
L+ + +G PD V+Y T++ CK+ R+ + L + M + + ++ D VTY TL++
Sbjct: 335 IELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIH 394
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IY 377
L K EA +G D V Y+ ++ A CKEG+M E+K L+ EM+ G
Sbjct: 395 MLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 454
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD T +V G+ + G + A L+ + G + Y L+ LC+ + A +
Sbjct: 455 PDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREM 514
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + + P+ Y+ LM L K +++A + EMV + P L+ C
Sbjct: 515 MNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 574
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
GR+ EA M+E L G + +I+G+C +++ A ++L + D +
Sbjct: 575 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 634
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
Y + + + G +++ EL K+ L G P +T + +IH
Sbjct: 635 YTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 675
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 173/334 (51%), Gaps = 7/334 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP-NTHTFNILTHVFCKNGDVDK 258
GF+ V + +++ L K + + + EM G CP + T+ + + FC+ G+VDK
Sbjct: 416 GFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 475
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
L+ + G+ P+ V+Y L++ C+ G+ +A + + + P+ +TY+ LM+
Sbjct: 476 AKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMH 535
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
GL KEGK+ EA + MV +G P V N L+ + C++G+ E++ + E + G
Sbjct: 536 GLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 595
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATS 436
+ ++ G+ + L +AL+++ ++ + ++ D++ Y L+ AL + R AT
Sbjct: 596 NVVNFTTVIHGFCQNDELDAALSVLDDM--YLINKHADVFTYTTLVDALGKKGRIAEATE 653
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L++++ G P+ Y ++ C+ + V D + + ++M+ R + + Y +I C
Sbjct: 654 LMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILR--QKCKTIYNQVIEKLC 711
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
G+G+ EA L+ ++L + D++ C L+ GY
Sbjct: 712 GLGKLEEADKLLGKVLRTASRSDAKTCYALMEGY 745
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 174/368 (47%), Gaps = 3/368 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
A K G + E+ + L G P +V+ ++NG +L +D+ ++ + M G
Sbjct: 430 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYK 489
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PNT ++ L + C+ G + + EE+ + P+ +TY+ L+ K+G+L++A +
Sbjct: 490 PNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDV 549
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R M + P V L+ LC++G+ EA + +++G + ++V++ T+I +C+
Sbjct: 550 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 609
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
++ + S+L +M + D FT +V GK+GR+ A L+ ++ G+ +
Sbjct: 610 NDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVT 669
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y +I CQ + ++LE++ + IYN+++E LC + +A L +++
Sbjct: 670 YRTVIHRYCQMEKVDDLVAILEKMILRQKCKT--IYNQVIEKLCGLGKLEEADKLLGKVL 727
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ T AL+ + IG A + M ++PD ++C L +E N
Sbjct: 728 RTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGN 787
Query: 538 KAEALLGF 545
LL F
Sbjct: 788 DNNMLLYF 795
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 161/378 (42%), Gaps = 14/378 (3%)
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
M R GI F + + + G + L ++ G +P+L+ NT I + + R
Sbjct: 236 MKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 295
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L A M ++P++VTY ++ G C +V EA +L M +G PD VSY T
Sbjct: 296 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYT 355
Query: 351 LIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
++ CKE ++ E + L+ +M +G+ D T ++ K AL + + +
Sbjct: 356 IMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEK 415
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVAD 468
G I + Y ++ ALC++ R A L+ + G+ P + Y ++ C+ V
Sbjct: 416 GFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 475
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A L M KP+ +Y AL+ C G+S EA +M+ E P+S VL++
Sbjct: 476 AKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMH 535
Query: 529 GYCMEK------DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
G E DV + L GFF +I N + DG + + + L
Sbjct: 536 GLRKEGKLSEACDVVREMVLKGFFPGPVEI------NLLLQSLCRDGRTHEARKFMEECL 589
Query: 583 RLGFAPNNLTCKYMIHSL 600
G A N + +IH
Sbjct: 590 NKGCAINVVNFTTVIHGF 607
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 238/557 (42%), Gaps = 19/557 (3%)
Query: 53 PETQNPNKIVDLICSSLKKG----DSHLTLLQNDLKPLLPHLGAHEISRVL--LRCQSDS 106
P+ P+ V I S L G +S L L N L L + +S VL + Q
Sbjct: 21 PQDLKPSPWVHQIMSLLLDGPVDMESRLDLFCNKF---LIKLSPNFVSFVLKSMELQKRP 77
Query: 107 VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL FF W + Y + +LA N + C+ + F
Sbjct: 78 DLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMG---------F 128
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
+S ++ +G++ E +R + G +PS+ + NFLLNGL+ I+ +
Sbjct: 129 LMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAER 188
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
V E M I P+ T+N + +C+ G K +E PD +TY TLI +
Sbjct: 189 VLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACY 248
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
+G + LY M + Y+ ++ GLCKEGK E + +F +M+ +G ++
Sbjct: 249 AEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVA 308
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
Y LI + K G M E+ L M G+ PD T ++V K GRL A+ +
Sbjct: 309 IYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFC 368
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ GV+++ +Y LI L + R A L E + + G P YN L+++L KC
Sbjct: 369 RVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKT 428
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+AL M D ++ TY +I ++ EA+ + D M++ G+ P + R L
Sbjct: 429 DEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRAL 488
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
G C+ V +A LL A I +T ++ + N+ + G + + +L F+ G
Sbjct: 489 SIGLCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKLADGFVDRGR 547
Query: 587 APNNLTCKYMIHSLWKG 603
+I++L K
Sbjct: 548 EIPGRVRTVLINALRKA 564
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 175/348 (50%), Gaps = 19/348 (5%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDC 176
D ++KPT +Y + IL N A+ E+ E K P +V LI C +
Sbjct: 113 DFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMRE--KGIPPTVVSLNILIKALCKNE- 169
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ +F+ FR+ + G QP + L+NGL KL I Q ++ +EM G+
Sbjct: 170 -------ETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGL 222
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ ++ L H C++ ++D+ LE++ G +P++ TY++L+ CK G + A
Sbjct: 223 SPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAME 282
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
L +M RR +LP++VTY+TL+NGLCKEGK REA ++ RM +GL PD Y +I C
Sbjct: 283 LLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLC 342
Query: 357 KEGKMQESKSLLYEMMGNGIYPD----TFTCQ---IIVQGYGKEGRLLSALNLVVELQRF 409
QE+ + + EM GI P+ TF + ++VQG A L + ++
Sbjct: 343 AACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTR 402
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
G+S+ +D L+ C+ A +LE + DG +P ++N LM
Sbjct: 403 GISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLM 450
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 170/369 (46%), Gaps = 44/369 (11%)
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+V+ +M + P ++ + + + V + GF +++ E+G P +V+ N LI +
Sbjct: 106 RVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKAL 165
Query: 286 CK-KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
CK + + AF L+R M R PD TY TL+NGLCK GK+ +A +L M +GLSP
Sbjct: 166 CKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPS 225
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+VSY +LI C+ + E+ LL EM+ NGI P+ FT ++ G K G A+ L+
Sbjct: 226 VVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLE 285
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
+ R + + Y LI LC++ + A +L+R+ G P +Y ++ LC
Sbjct: 286 VMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAAC 345
Query: 465 SVADALLLKDEM-----------------------------VD-------------RNIK 482
+ +A DEM VD R I
Sbjct: 346 NYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGIS 405
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK-AEA 541
+ T+ L+ CFC G +A +++EM+ G +PD + VL+ G K V + E
Sbjct: 406 VEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTEL 465
Query: 542 LLGFFAKKF 550
L+ +KF
Sbjct: 466 LVAELKQKF 474
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 146/298 (48%), Gaps = 1/298 (0%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G + +TF + H G LE++++E + + T+ Y + R DA
Sbjct: 45 GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
++ M V P +Y T+ + L +E V+ A + M +G+ P +VS N LI A
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164
Query: 355 YCKEGKMQESK-SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
CK + ES L EM G PD++T ++ G K G++ A L+ E++ G+S
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
S Y LI LCQ N A LLE + +G P++ Y+ LM+ LCK + A+ L
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
+ MV R + P++ TY LI C G+ EAV ++D M G+ PD+ + +I+G C
Sbjct: 285 EVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLC 342
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 16/277 (5%)
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
R H F M+HR +VS N A EG ++ K E + D F I
Sbjct: 47 RHDHNTFGAMIHR-----LVSVNQFRPA---EGMLERMKQEDCE-----VTEDVFL--TI 91
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+GYG+ R L A+ + +++ F V ++ Y + L ++N A + + + G
Sbjct: 92 CRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGI 151
Query: 447 VPSLEIYNELMESLCKCD-SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P++ N L+++LCK + +V A L EM +R +P TY LI C +G+ +A
Sbjct: 152 PPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAK 211
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+DEM E G+ P LI+G C ++++A LL + +Y+++ +
Sbjct: 212 ELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGL 271
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G S+ MEL + +R PN +T +I+ L K
Sbjct: 272 CKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCK 308
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 140/356 (39%), Gaps = 39/356 (10%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE---GFDPDLVTYNTLISSYCKKGRLNDA 294
P T +++ + D++K + EE GF D T+ +I + A
Sbjct: 10 PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+ M + + + T+ G + + +A ++FH+M + P SY T+
Sbjct: 70 EGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDI 129
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
+E ++ + EM GI P + I
Sbjct: 130 LVEENHVKRAIGFYKEMREKGIPPTVVSLNI----------------------------- 160
Query: 415 RDIYDYLIVALCQDNRPF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
LI ALC++ +A L + G P Y L+ LCK ++ A L
Sbjct: 161 ------LIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELL 214
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
DEM ++ + PS+ +Y +LI C EA+ L++EM+ +G+ P+ L++G C
Sbjct: 215 DEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKS 274
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
++A LL ++ + + +Y+ + N ++G + +E+ R G P+
Sbjct: 275 GHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPD 330
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 1/234 (0%)
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
E NG D T ++ + A ++ +++ ++ D++ + + +
Sbjct: 40 EEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVH 99
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
RP A + ++ P+ + Y + + L + + V A+ EM ++ I P++ +
Sbjct: 100 RPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLN 159
Query: 490 ALICCFCGIGRSGE-AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
LI C + E A L EM G PDS LING C +++A+ LL +
Sbjct: 160 ILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEE 219
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K SY ++ + + +L + +EL + + G PN T ++ L K
Sbjct: 220 KGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCK 273
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/495 (23%), Positives = 223/495 (45%), Gaps = 5/495 (1%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F+ V+ PT +++ L + K A+++ ++++ VD +
Sbjct: 145 ALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT 204
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
I CN +G I E + + G P +V N +++G K + +
Sbjct: 205 SIVVKGLCN-----LGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTL 259
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+E+ G+ P T+ L + FCK G+ + V+ L ++ G + ++ +N +I + K
Sbjct: 260 KELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKY 319
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + A R M PD+ TY T++N CK G+++EA + + RGL P+ SY
Sbjct: 320 GLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSY 379
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
L+ AYCK+G ++ +L+ + G PD + + G G + AL + ++
Sbjct: 380 TPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMME 439
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
GV IY+ L+ LC++ R A LL + P + ++ LM+ + + +
Sbjct: 440 KGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDE 499
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
A+ + ++ + + P + Y A+I FC G+ +A+S +++M PD +I+
Sbjct: 500 AIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVID 559
Query: 529 GYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
GY + D++ A + G K + +Y ++ N F + D+ + ++ + P
Sbjct: 560 GYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVP 619
Query: 589 NNLTCKYMIHSLWKG 603
N +T ++ +K
Sbjct: 620 NVVTYTTLVGGFFKA 634
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 157/658 (23%), Positives = 283/658 (43%), Gaps = 71/658 (10%)
Query: 4 ISPKKQSFCINFISKLAFSSFSSASSSYSLQIIQDSE--HKSL-----SNPLYNFLPETQ 56
+ P +++F S L + S S +LQ+ H L SN L N L ++
Sbjct: 122 LKPTREAF-----SALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSG 176
Query: 57 NPNKIVDLICSSLKKGDSHLTLLQNDLKPL----LPHLGAHEISRVLL--RCQSDSVSAL 110
+ + L L+ D ++ N + L +LG E R L+ R V +
Sbjct: 177 KVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHV 236
Query: 111 TFFNWV------KNDLE-------------IKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
F+N + K DL+ + PT Y +++ +F ++L E
Sbjct: 237 VFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTE 296
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+ + +V VF ++I A K GL+ ++ +T R+ ++G P I + N +
Sbjct: 297 MA--ARGLNMNVKVFNNVID-------AEFKYGLVTKAAETMRRMAEMGCGPDITTYNTM 347
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+N K I + + E+ G+ PN ++ L H +CK GD K G L +I E G
Sbjct: 348 INFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGE 407
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PDLV+Y I G ++ A + M + V PD Y LM+GLCK G+
Sbjct: 408 KPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKL 467
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L M+ R + PD+ + TL+ + + G++ E+ + ++ G+ P +++G+
Sbjct: 468 LLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFC 527
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K G++ AL+ + +++ + Y +I + + +A + ++ + + P++
Sbjct: 528 KFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVI 587
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIK-----PSLSTYRALICCFCGIGRSGEAVS 506
Y L+ CK A +++ E V R +K P++ TY L+ F G+ +A S
Sbjct: 588 TYTSLINGFCK-----KADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATS 642
Query: 507 LMDEMLESGMLPDSQICRVLINGYC---------MEKDV--NKAEALLGFFAKKF-QIYD 554
+ + ML +G P+ LING EKD N+ +L FF + +D
Sbjct: 643 IFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWD 702
Query: 555 T--ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WKGMERKFQ 609
+YN+V + G + L + L GF +++ M+H L KG ++++
Sbjct: 703 QVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWR 760
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 128/356 (35%), Gaps = 75/356 (21%)
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL- 367
D V +++L+ L E + M + L P +++ LI AY + G + + L
Sbjct: 90 DGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLF 149
Query: 368 ----------------------------------LYEMM-----GNGIYPDTFTCQIIVQ 388
LY+ M G G D +T I+V+
Sbjct: 150 HTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVK 209
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G G++ LV + G Y+ +I C+ AT L+ + G +P
Sbjct: 210 GLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLP 269
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDR----NIK---------------------- 482
++E Y L+ CK L EM R N+K
Sbjct: 270 TVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETM 329
Query: 483 ---------PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
P ++TY +I C GR EA +++ E G+LP+ L++ YC +
Sbjct: 330 RRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQ 389
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
D KA +L A+ + D SY A + G++ + ++++ + G P+
Sbjct: 390 GDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPD 445
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 212/430 (49%), Gaps = 21/430 (4%)
Query: 102 CQSDSVSALTFFNWVKNDLEIK---PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
C+ + + A T V N ++ + P Y +++ L K A+K+L +L L+ +
Sbjct: 148 CKVNRIEAAT---QVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL--LLDN 202
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
C +V + LI T + G I E+ K + L G P + + N ++ G+ K
Sbjct: 203 CMPTVITYTILIEAT-------IVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+++ ++ + G P+ ++NIL F G D+ + ++ G +P+ VTY
Sbjct: 256 GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY 315
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+ LISS C+ GR+++A + ++M + + PD +Y L++ LCKEG++ A + M+
Sbjct: 316 SILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMIS 375
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G PDIV+YNT++ A CK G ++ + ++ G G P+ + ++ G
Sbjct: 376 NGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSR 435
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL +V + GV Y+ LI LC+D A LL+ + Q G+ P++ YN ++
Sbjct: 436 ALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLL 495
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG---EAVSLMDEMLESG 515
LCK + DA+ + EM+++ +P+ +TY LI GIG +G EA+ L + +
Sbjct: 496 GLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI---EGIGFAGWRTEAMELANSLFSRD 552
Query: 516 MLPDSQICRV 525
++ R+
Sbjct: 553 VISQDSFKRL 562
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 196/421 (46%), Gaps = 1/421 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ES ++ G+ P ++ C L+ G I++ +V E + P+
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESHTEPDVF 138
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+N + FCK ++ L +++ GF PD+VTYN +I S C + +L A + +
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
N +P ++TYT L+ EG + EA +L M+ RGL PD+ +YN +I CKEG +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + L+ + G PD + I+++ + +G+ LV E+ G ++ Y L
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I +LC+ R A S+L+ + + P Y+ L+ +LCK + A+ + D M+
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P + Y ++ C G + +A+ + +++ G P+ +I+ D ++A
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
++ K D +YN++ + DG + + + L + GF P ++ ++ L
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498
Query: 602 K 602
K
Sbjct: 499 K 499
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 179/373 (47%), Gaps = 3/373 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KV I + + + GF P IV+ N ++ L + +V +++ P
Sbjct: 146 GFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMP 205
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ IL G +++ LE++ G PD+ TYN +I CK+G + A L
Sbjct: 206 TVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELI 265
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD+++Y L+ +GK E +L M RG P+ V+Y+ LI + C+
Sbjct: 266 TSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 325
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G++ E+ S+L M+ + PDT++ ++ KEGRL A+ ++ + G Y
Sbjct: 326 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 385
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ ALC++ A + ++ G P++ YN ++ +L C + AL + M+
Sbjct: 386 NTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMIS 445
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ + P TY +LI C C G EA+ L+D+M +SG P +++ G C + ++
Sbjct: 446 KGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDD 505
Query: 539 AEALLGFFAKKFQ 551
A +G FA+ +
Sbjct: 506 A---IGMFAEMIE 515
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 166/327 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++++ L+ + I++ ++ EEM G+ P+ +T+N + CK G V++
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ + +G PD+++YN L+ ++ +G+ ++ L M+ R P+ VTY+ L++ LC+
Sbjct: 265 ITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 324
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G++ EA + M+ + L+PD SY+ LI A CKEG++ + ++ M+ NG PD
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K G AL + +L+ G + Y+ +I AL A ++ +
Sbjct: 385 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 444
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P YN L+ LC+ V +A+ L D+M +P++ +Y ++ C + R
Sbjct: 445 SKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRID 504
Query: 503 EAVSLMDEMLESGMLPDSQICRVLING 529
+A+ + EM+E G P+ +LI G
Sbjct: 505 DAIGMFAEMIEKGCRPNETTYILLIEG 531
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 173/367 (47%), Gaps = 2/367 (0%)
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
TH +L CK G ++ FLE + +G+ PD++ LI + + A +
Sbjct: 69 THLMKLLNRS-CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME 127
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
I+ + PD+ Y +++G CK ++ A Q+ +RM RG PDIV+YN +I + C
Sbjct: 128 IL-ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ + +L +++ + P T I+++ EG + A+ L+ E+ G+ Y+
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I +C++ A L+ + G P + YN L+ + + L EM R
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P+ TY LI C GR EA+S++ M+E + PD+ LI+ C E ++ A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
++ + + D +YN + ++G+ ++ +E+ + +G PN + MI +
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISA 426
Query: 600 LWKGMER 606
LW +R
Sbjct: 427 LWSCGDR 433
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 171/321 (53%), Gaps = 1/321 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LL+ L+K N + + +++E + P+T TFNIL C+ G VD+ + +E
Sbjct: 147 NNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMES 206
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
G PD+VTYNTLI+ CK + L++ I R + PD+VTYT++++G CK GK++
Sbjct: 207 FGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMK 266
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA LF M+ G+ P+++++N LI + K G + E++++ +M D T ++
Sbjct: 267 EASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLI 326
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + G++ L ++ VS + Y LI ALC++NR A L +I +
Sbjct: 327 DGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSII 386
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +YN +++ CK +V + ++ EM ++ P T+ LI C GR EA+++
Sbjct: 387 PKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINI 446
Query: 508 MDEMLESGMLPDSQICRVLIN 528
+ ML + PD+ LI+
Sbjct: 447 FNRMLATRCAPDNITVNSLIS 467
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 160/335 (47%), Gaps = 1/335 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P FL+ + + + D ++ E+ + N+ +N L V K V +
Sbjct: 103 GHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEA 162
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ PD T+N LI C+ G ++ AF +++ M LPD+VTY TL+NG
Sbjct: 163 IYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLING 222
Query: 320 LCKEGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
LCK +V+ +LF + R SPDIV+Y ++I +CK GKM+E+ +L EMM +GI P
Sbjct: 223 LCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQP 282
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T +++ G+GK G + A + ++ F S + LI C+ +
Sbjct: 283 NVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFW 342
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ P++ Y L+ +LCK + + +A ++ + +I P Y +I FC
Sbjct: 343 NVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKA 402
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
G E ++ EM E PD +LI G+C++
Sbjct: 403 GNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVK 437
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 179/374 (47%), Gaps = 13/374 (3%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
E++ S Y ++ +L N+ A+ + E LV P F LI
Sbjct: 138 EVRINSFVYNNLLSVLVKQNQVHEAIYLFKEY--LVMQSPPDTWTFNILIR-------GL 188
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PN 239
+VG + +F+ F+ G P +V+ N L+NGL K N + + ++++E+ C P+
Sbjct: 189 CRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPD 248
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+ + FCK+G + + + E++ G P+++T+N LI + K G + +A +YR
Sbjct: 249 IVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYR 308
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + D+VT+T+L++G C+ G+V + ++ M R +SP + +Y LI A CKE
Sbjct: 309 KMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKEN 368
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E++ L ++ + I P F ++ G+ K G + ++ E++ + +
Sbjct: 369 RLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFT 428
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD-EMVD 478
LI+ C R F A ++ R+ P N L+ L K +A ++ + D
Sbjct: 429 ILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALED 488
Query: 479 RNIKPSLSTYRALI 492
RN+ LS++ I
Sbjct: 489 RNL--GLSSFEKAI 500
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 36/366 (9%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L+ L ++ D V++ MG G P++ L + D D V L +++
Sbjct: 77 NLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQG 136
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+ + YN L+S K+ ++++A YL++ PD T+ L+ GLC+ G V
Sbjct: 137 KEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDR 196
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIV 387
A ++F M G PD+V+YNTLI CK ++Q L E+ PD T I+
Sbjct: 197 AFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSII 256
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G+ K G++ A ++L E + + G
Sbjct: 257 SGFCKSGKMKEA-----------------------------------SNLFEEMMRSGIQ 281
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P++ +N L++ K ++A+A + +M + + T+ +LI +C G+ +
Sbjct: 282 PNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKF 341
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ M + P VLIN C E +N+A LG I YN V + F +
Sbjct: 342 WNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCK 401
Query: 568 DGDLSK 573
G++ +
Sbjct: 402 AGNVDE 407
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
N+ STY L+ C +G + D M G LPDS++ L+ D +
Sbjct: 68 NVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ LL K ++ YN + ++ + + + + L K +L + P+ T +I
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRG 187
Query: 600 LWK--GMERKFQ 609
L + G++R F+
Sbjct: 188 LCRVGGVDRAFE 199
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 209/430 (48%), Gaps = 36/430 (8%)
Query: 186 IRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++++ F+K + +P+ V ++NGL K + + + M + PNT T+
Sbjct: 158 VKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYT 217
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I+ FCK+G +D L +++++ PD+ TY+TLI + CK + + L+ M
Sbjct: 218 IVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL 277
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
N+ P++ T+ ++++GLCKEGKV +A ++ M+ +G+ PD+++YN +I Y G++ +
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ + M+ I PD + I++ GY ++ ++ A+ + E+ + G+ S + L+
Sbjct: 338 REIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSL---------------------------------- 450
L + R +A + + + G++P L
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457
Query: 451 -EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+IY +++ LCK + A +++ + P + TY A+I +C G EA ++
Sbjct: 458 IQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M ++G L D++ V++ G+ V++ +A L A K ++ + + ++ AED
Sbjct: 518 KMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDP 577
Query: 570 DLSKLMELQK 579
+++ M K
Sbjct: 578 SITRKMHWIK 587
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 175/364 (48%), Gaps = 1/364 (0%)
Query: 235 GICPNTHTFNILTH-VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLND 293
GI N TF L +F +N D V+ F + + E +P+ V Y T+++ CKKG
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 294 AFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
AF L R+M + + P+ TYT +++ CK+G + A L + M + + PDI +Y+TLI
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLID 256
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSI 413
A CK + + ++L EM+ IYP+ T ++ G KEG++ A ++ + GV
Sbjct: 257 ALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDP 316
Query: 414 SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK 473
Y+ +I + A + + + P + YN L+ + + +A+ +
Sbjct: 317 DVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVC 376
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
E+ + +KPS+ T L+ +GR+ A + DEML +G +PD L+ GY
Sbjct: 377 REISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKN 436
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
V +A + ++ + + + Y AV + ++G L K ++ +G P+ +T
Sbjct: 437 GLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITY 496
Query: 594 KYMI 597
MI
Sbjct: 497 TAMI 500
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 177/399 (44%), Gaps = 37/399 (9%)
Query: 206 VSCNF-LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
V NF + N + C+D + ++ +M R P+ +F+ L V
Sbjct: 37 VKGNFGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFR 96
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+I + + +++S C R + F + I +++ + + VT+TTL+ GL E
Sbjct: 97 EIHKLRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAEN 156
Query: 325 KVREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
KV++A LF ++V + P+ V Y T++ CK+G Q++ LL M P+T T
Sbjct: 157 KVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTY 216
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
I++ A C+D ATSLL + Q
Sbjct: 217 TIVID-----------------------------------AFCKDGMLDGATSLLNEMKQ 241
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
P + Y+ L+++LCK + L EM+ NI P++ T+ ++I C G+ +
Sbjct: 242 KSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVED 301
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A +M M+E G+ PD ++I+GY + V++A + K D SYN + N
Sbjct: 302 AEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILIN 361
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+A + + M++ + + G P+ +TC ++H L++
Sbjct: 362 GYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFE 400
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 116/213 (54%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + F ++ +P I+S N L+NG + ID+ QV E+ + G+ P+ T
Sbjct: 332 GQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTC 391
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N+L H + G F +++ G PDL T+ TL+ Y K G + +A + + R
Sbjct: 392 NVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLER 451
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++ YT +++GLCK GK+ +AH F ++ GL PD+++Y +I YC+EG + E
Sbjct: 452 RREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDE 511
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+K +L +M NG D T +IV+G+ + ++
Sbjct: 512 AKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKV 544
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 135/286 (47%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ + R ++ G P +++ N +++G +D+ ++++ M I P+
Sbjct: 295 KEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDII 354
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
++NIL + + + +D+ +I ++G P +VT N L+ + GR A + M
Sbjct: 355 SYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEM 414
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+PDL T+ TL+ G K G V EA FH++ R +I Y +I CK GK+
Sbjct: 415 LSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ + ++ G++PD T ++ GY +EG L A +++ +++ G Y+ +
Sbjct: 475 DKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVI 534
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ + N+ + LE I + LM+ + + S+
Sbjct: 535 VRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSIT 580
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 105/209 (50%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + I E+ + R+ G +PSIV+CN LL+GL +L ++EM G P
Sbjct: 362 GYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T L + KNG V++ K+E D ++ Y +I CK G+L+ A +
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD++TYT +++G C+EG + EA + +M G D +YN ++ + +
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
K+ E K+ L E+ G + T ++++
Sbjct: 542 NKVSEMKAFLEEIAGKSFSFEAATVELLM 570
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 164/317 (51%), Gaps = 7/317 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +VS + ++NG K +D+ M I PN T+N + CK VDK
Sbjct: 86 PDVVSYSTVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + G PD +TYN+++ +C G+ +A + M V PD+VTY +LM+ LCK
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ EA ++F M RGL PDI +Y TL+ Y +G + E LL M+ NGI+P+ +
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+V Y K+ ++ A+ + ++++ G++ + Y +I LC+ R A E++
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P +YN L+ SLC D A L EM+DR I S + ++I C GR
Sbjct: 319 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378
Query: 503 EAVSLMDEMLESGMLPD 519
E+ L D M+ G+ PD
Sbjct: 379 ESGKLFDLMVRIGVKPD 395
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 176/348 (50%), Gaps = 9/348 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTHTFNILTHVFCKNGDVDKVN 260
P + S N LLNGL N + ++ M G P+ +++ + + F K GD+DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ ++ P++VTYN++I++ CK ++ A + M + V+PD +TY ++++G
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G+ +EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ PD
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++QGY +G L+ L+ + R G+ + ++ L+ A + + A + +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ Q G P+ Y +++ LCK V DA+L ++M+D ++P Y +LI C +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+A L EML+ G+ + +I+ +C E V ++ L +
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVR 389
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 197/403 (48%), Gaps = 24/403 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P +Y ++++ L N+ A+++L + + DCP V + +I+
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVIN------------ 96
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +E K LD P++V+ N ++ L K +D+ +V M + G+ P+ T+
Sbjct: 97 GFFKEG--DLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTY 154
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + H FC +G + FL+K+ +G +PD+VTYN+L+ CK GR +A ++ M +
Sbjct: 155 NSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTK 214
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + PD+ TY TL+ G +G + E H L MV G+ P+ ++ L+ AY K+ K++E
Sbjct: 215 RGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEE 274
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + +M G+ P+ T ++ K GR+ A+ ++ G+ +Y+ LI
Sbjct: 275 AMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIH 334
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+LC ++ A L + G S +N +++S CK V ++ L D MV +KP
Sbjct: 335 SLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP 394
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ T +GR+ EA L +G++P+ R++
Sbjct: 395 DIIT----------LGRNDEAKDLFVAFSSNGLVPNYWTYRLM 427
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 15/323 (4%)
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNT 350
DA +++ + RR + PD+ +Y L+NGLC E + +EA +L H M G PD+VSY+T
Sbjct: 35 DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I + KEG + +M+ I P+ T I+ K + A+ ++ + + G
Sbjct: 94 VINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
V Y+ ++ C +P A L+++ DG P + YN LM+ LCK +A
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ D M R +KP ++TY L+ + G E L+D M+ +G+ P+ + +L+ Y
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
++ V +A + ++ + +Y V ++ + G + M ++ + G P++
Sbjct: 267 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 326
Query: 591 LTCKYMIHSL-----WKGMERKF 608
+ +IHSL W+ E F
Sbjct: 327 IVYNSLIHSLCIFDKWEKAEELF 349
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 25/287 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI PN +
Sbjct: 198 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 257
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+IL + K V++ K+ ++G +P+ VTY T+I CK GR+ DA + M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ PD + Y +L++ LC K +A +LF M+ RG+ + +N++I ++CKEG++
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377
Query: 362 -------------------------QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
E+K L NG+ P+ +T +++ + +G L
Sbjct: 378 IESGKLFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 437
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
L + ++ G ++ + ++++ L Q A + L I +
Sbjct: 438 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 484
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 50/276 (18%)
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTCQ 384
+A +F ++ RG+ PD+ SYN L+ C E + QE+ LL+ M +G PD +
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ KEG L L+ +RI
Sbjct: 93 TVINGFFKEGDLDKMLD-------------------------------------QRIS-- 113
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
P++ YN ++ +LCK +V A+ + MV + P TY +++ FC G+ EA
Sbjct: 114 ---PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEA 170
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ + +M G+ PD L++ C +A + K+ D +Y +
Sbjct: 171 IVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQG 230
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNN-----LTCKY 595
+A G L ++ L +R G PN+ L C Y
Sbjct: 231 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266
Score = 38.5 bits (88), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 94/229 (41%), Gaps = 20/229 (8%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+S V + D ++P S Y ++H L +K+ A ++ E+++ +
Sbjct: 302 CKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD--RGICL 359
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S F +I ++ K G + ES K F + +G +P I++ L
Sbjct: 360 STIFFNSIID-------SHCKEGRVIESGKLFDLMVRIGVKPDIIT----------LGRN 402
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D+ ++ G+ PN T+ ++ G +++++ +E+ G D N +
Sbjct: 403 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFI 462
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ ++G + A ++ ++ + T + ++ L GK +E H
Sbjct: 463 VRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLSGGKYQEYH 510
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 211/433 (48%), Gaps = 35/433 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIVS N +++ K+ ID + M + G+ ++ ++NIL H C G +D+ GF
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ +E+ G +PD+VTYNTL + G ++ A + + M + + PDLVTYTTL+ G C+
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + EA +L + RG +++ YN L+ CK G+++E+ +L EM + PD
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQ---RF-----------------GVSISRD------ 416
I++ G KEG + A L +++ +F +S +R+
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508
Query: 417 ---------IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+Y+ +I + + A L ++ + G PS+ +N L+ C+ +
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A + + + + + PS+ TY L+ +C +G E + EM + ++P VLI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C + ++++ LL + K + D+ +YN + F + +++K ++L L
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688
Query: 588 PNNLTCKYMIHSL 600
P +T K +I++L
Sbjct: 689 PTQVTYKVLINAL 701
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 208/426 (48%), Gaps = 8/426 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ ++G I E+ K ++TL GF+ +++ N LL+ L K+ I++ +++EM + + P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++IL H CK G V + E++ + P ++ K G +++A +
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R +++ D+V Y +++G + + EA QL+++M+ RG++P +V++NTLI +C+
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRR 564
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E++ +L + G+ P T ++ Y + G + + + E++ V + Y
Sbjct: 565 GDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTY 624
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ N+ + LLE + G +P YN +++ CK + AL L + M+
Sbjct: 625 TVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLL 684
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
N P+ TY+ LI C G + ++ + + + +I +C + V+K
Sbjct: 685 HNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSK 744
Query: 539 AEALLGFF----AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
A LG+F AK F I Y+AV N + G +++ L G P+ CK
Sbjct: 745 A---LGYFNQMLAKGFVI-SIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICK 800
Query: 595 YMIHSL 600
++++
Sbjct: 801 TVLNAF 806
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 184/405 (45%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG I E+ F + + +P + + L++GL K + + +Q+YE+M P+
Sbjct: 423 KVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHF 482
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ KNG++ + + + D+V YN +I Y + + +A LY M
Sbjct: 483 AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKM 542
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P +VT+ TL+NG C+ G + EA ++ + +GL P +V+Y TL+ AYC+ G M
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
QE L+EM N + P T ++++G ++ ++ +L L+ + G+ Y+ +
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ A L + P+ Y L+ +LC + D + + DRNI
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
TY +I C G+ +A+ ++ML G + + +IN C + +A+
Sbjct: 723 TLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+ D E V N F + G+ S + E ++ GF
Sbjct: 783 FFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 10/409 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
ALT F+ ++ L ++P Y +++H L A + L E + L + PH
Sbjct: 430 ALTLFDEMET-LRLEPDFIVYSILIHGLCKEGFVQRAYQ-LYEQMRLKRKFPHHFAQRAV 487
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ ++ N I E+ F + +V N +++G ++L+ I + Q+Y
Sbjct: 488 LLGLFKNGN--------ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLY 539
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M GI P+ TFN L + FC+ GD+ + LE I +G P +VTY TL+++YC+
Sbjct: 540 YKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + + F+ M V+P VTYT L+ GLC++ K+ E+ QL M +GL PD V+Y
Sbjct: 600 GNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTY 659
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NT+I +CK ++ ++ L M+ + P T ++++ G L +VV ++
Sbjct: 660 NTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+++ + Y +I A C + A ++ G+V S+ Y+ ++ LCK + +
Sbjct: 720 RNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITE 779
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
A M+ + P + ++ F G + + +++SG +
Sbjct: 780 AKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 35/423 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P +V+ N L G L L + +V ++M G+ P+ T+ L C+ G++++
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ GF +++ YN L+S CK GR+ +A L+ M + PD + Y+ L++G
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455
Query: 320 LCKEGKVREAHQLF----------HRMVHRG-------------------------LSPD 344
LCKEG V+ A+QL+ H R L D
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V YN +I Y + + E+ L Y+M+ GI P T ++ G+ + G L+ A ++
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE 575
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ G+ S Y L+ A C+ L + + VP+ Y L++ LC+ +
Sbjct: 576 VIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQN 635
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ ++L L + M + + P TY +I CFC +A+ L + ML P +
Sbjct: 636 KMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYK 695
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
VLIN C+ D+ + ++ + +Y + G +SK + + L
Sbjct: 696 VLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAK 755
Query: 585 GFA 587
GF
Sbjct: 756 GFV 758
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 232/550 (42%), Gaps = 76/550 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FF ++ N+ + + + ++ HILA +F EL ++K+ + V Q
Sbjct: 100 AVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFK-------ELDSVIKN----LIVDQG 148
Query: 169 LISCTEDC--------NW------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
L S + C NW AY + +I ++ K D+ FQ S+ +
Sbjct: 149 LGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTY 208
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LL+ + D W VY E+ G + T +IL H C+ ++ FL
Sbjct: 209 NSLLH---NMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SN 264
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+ P +V+ NT++S +CK G ++ A + +M + +L D +Y L++GLC G + E
Sbjct: 265 KVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDE 324
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A M G+ PD+V+YNTL + G M ++ ++ +M+ G+ PD T ++
Sbjct: 325 ALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ + G + AL L E G ++ Y+ L+ LC+ R A +L + + P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG------ 502
+Y+ L+ LCK V A L ++M + P RA++ G+ ++G
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL---LGLFKNGNISEAR 501
Query: 503 --------------------------------EAVSLMDEMLESGMLPDSQICRVLINGY 530
EA+ L +M+E G+ P LING+
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C D+ +A +L K + +Y + N + E G++ ++ P +
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTH 621
Query: 591 LTCKYMIHSL 600
+T +I L
Sbjct: 622 VTYTVLIKGL 631
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 206/432 (47%), Gaps = 42/432 (9%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G +E+ F ++ G +PS++S LL L D + + ++ G+ P++
Sbjct: 24 VEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDS 83
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
FN + + F ++G+++ K++E G P TYNTLI Y G+ ++ L +
Sbjct: 84 IFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLEL 143
Query: 301 MYRR-NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + NV P+L TY L+ C + ++ EA + ++M+ G+ PD+V+YNT+ AY ++G
Sbjct: 144 MSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKG 203
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ +++ ++ EM NG+ P+ TC II+ GY KEGR+ AL ++ G+ + I++
Sbjct: 204 ALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFN 263
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI + F A +++R G D E+ N LME
Sbjct: 264 SLI-------KGFVA--IMDRDGVD------EVLN-LMEEF------------------- 288
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+KP + T+ ++ + G + + D+M+++G+ PD+ +L GY ++ KA
Sbjct: 289 GVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKA 348
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
E LL K + + V + + G + + + + + G +PN T + +I
Sbjct: 349 EELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWG 408
Query: 600 L------WKGME 605
WK E
Sbjct: 409 FAEARQPWKAEE 420
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 205/457 (44%), Gaps = 14/457 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP+ +Y ++ L +F ++ ++ E + P S+ F +I+ A+ +
Sbjct: 45 KPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMN-PDSI-FFNAVIN-------AFSE 95
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-ICPNTH 241
G + + +TF K + G +P+ + N L+ G ++ ++ E M + G + PN
Sbjct: 96 SGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLR 155
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L +C + + + K+ G PD+VTYNT+ ++Y +KG L+ A + M
Sbjct: 156 TYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEM 215
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V P+ T +M+G CKEG++REA + +RM G+ P++V +N+LI +
Sbjct: 216 QNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDR 275
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+L M G+ PD T I+ + G + + ++ + G+ Y L
Sbjct: 276 DGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSIL 335
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ P A LL + + G+ P++ I+ ++ C + A+ + D+M R I
Sbjct: 336 AKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGI 395
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+L T+ LI F + +A ++ M E + P+ ++ + +A
Sbjct: 396 SPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANR 455
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
LLG +K E+ + G+L KL + Q
Sbjct: 456 LLGTRNRKEMTNRKEALEKEIPV----GNLEKLYQKQ 488
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 158/332 (47%), Gaps = 9/332 (2%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
SA+ F W + +KPT+S Y ++ K ++K+L EL+ + ++ +
Sbjct: 101 SAMETF-WKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLL-ELMSQEGNVKPNLRTYN 158
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
L+ A+ I E++ K + G QP +V+ N + + +DQ V
Sbjct: 159 VLVR-------AWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGV 211
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
EM G+ PN T I+ +CK G + + F +++E G P+LV +N+LI +
Sbjct: 212 ILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVA 271
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ + +M V PD++T++T+MN G + + ++F MV G+ PD +
Sbjct: 272 IMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHA 331
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y+ L Y + + ++++ LL M+ +G P+ ++ G+ G++ A+ + ++
Sbjct: 332 YSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMC 391
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ G+S + ++ LI + +P+ A +L+
Sbjct: 392 QRGISPNLKTFETLIWGFAEARQPWKAEEILQ 423
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 119/227 (52%), Gaps = 1/227 (0%)
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
T LMN L ++GK +EA +F+ ++ G P ++SY TL+ A + + S++ ++
Sbjct: 17 TKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEE 76
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
NG+ PD+ ++ + + G + SA+ ++Q G+ + Y+ LI +P
Sbjct: 77 NGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEE 136
Query: 434 ATSLLERIGQDGYV-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+ LLE + Q+G V P+L YN L+ + C + +A + +M+ I+P + TY +
Sbjct: 137 SVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIA 196
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ G +A ++ EM +G+ P+ + C ++++GYC E + +A
Sbjct: 197 TAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREA 243
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 148/310 (47%), Gaps = 1/310 (0%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L++ +KG+ +A ++ + P L++YTTL+ L + + + + ++ G
Sbjct: 19 LMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENG 78
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
++PD + +N +I A+ + G M+ + ++M NG+ P T T +++GYG G+ ++
Sbjct: 79 MNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESV 138
Query: 401 NLVVELQRFG-VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L+ + + G V + Y+ L+ A C R A +++ ++ G P + YN + +
Sbjct: 139 KLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATA 198
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ ++ A + EM + ++P+ T ++ +C GR EA+ M E G+ P+
Sbjct: 199 YAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPN 258
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
I LI G+ D + + +L + D +++ + N ++ G + K E+
Sbjct: 259 LVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFD 318
Query: 580 RFLRLGFAPN 589
++ G P+
Sbjct: 319 DMVKAGIEPD 328
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+KP Y ++V AW NK K + E +V S + D+++ AY
Sbjct: 150 VKPNLRTYNVLVR--AWCNK-----KRITEAWNVVYKMIAS-GIQPDVVTYNTIAT-AYA 200
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + ++ + + G QP+ +C +++G K I + + M +GI PN
Sbjct: 201 QKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLV 260
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
FN L F D D V+ L +EE G PD++T++T+++++ G + ++ M
Sbjct: 261 IFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDM 320
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ + PD Y+ L G + + +A +L M+ G P++V + T+I +C GKM
Sbjct: 321 VKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKM 380
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
+ + +M GI P+ T + ++ G+ + + A ++ + F V
Sbjct: 381 DYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEV 430
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/555 (23%), Positives = 246/555 (44%), Gaps = 19/555 (3%)
Query: 40 EHKSLSNPLYNFLPETQNPNK------IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAH 93
H + +YN + ++ P IVD +C + D+ L L QND K P + +
Sbjct: 129 RHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVS- 187
Query: 94 EISRVLLR-CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL 152
+ ++ R C+ F + I P + +Y +++H L E
Sbjct: 188 -FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSME-------EA 239
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL-DVGFQPSIVSCNFL 211
+EL D Q + + + +GL+ + + +K L D G +P +V+ L
Sbjct: 240 LELTNDMEKQG--LQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVL 297
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
+ G ++ I++ ++ ++ G N +++L CK G VD+ L ++E
Sbjct: 298 ICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL 357
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
PDLVTY+ LI CK+G++ A LY+ M + P+ ++ ++ GLC++G + +A
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
F ++ L PD+ YN +I Y K G ++E+ L + I P T ++ G+
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFC 477
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
K +++ A L+ ++ G+ S Y L+ A C++ LL + P++
Sbjct: 478 KNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y +++ LCK + +++ L ++M + + P TY +I CFC +A L+D+M
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L + P VLI+G C DV A+ +L + +Y + GD
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDA 657
Query: 572 SKLMELQKRFLRLGF 586
+ +++ + + GF
Sbjct: 658 QRAVKVFHQMVEKGF 672
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 198/424 (46%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y K+GL + F L G P S N L++GL+ +++ ++ +M + G+ P+
Sbjct: 195 YCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPD 254
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEK-IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T+ I+ F G + ++K + +EG PDLVTY LI +C+ G + +A L
Sbjct: 255 MVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLR 314
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + +++ Y+ L++ LCK G+V EA QL + M L PD+V+Y+ LI CK+
Sbjct: 315 RDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQ 374
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK+Q++ L EM N I+P++F I++G ++G L A L + +Y
Sbjct: 375 GKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLY 434
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I + A L +R+ PS+ +N L+ CK V +A L + +
Sbjct: 435 NIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKL 494
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++PS TY L+ +C G + L+ EM + P V+I G C ++ + +
Sbjct: 495 HGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEE 554
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ LL K D +YN + F + D+ K EL L P T +I
Sbjct: 555 SVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLID 614
Query: 599 SLWK 602
L +
Sbjct: 615 GLCR 618
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 177/336 (52%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G++ ++ F + +P + N +++G +KL +++ ++Y+ + I P+ TF
Sbjct: 410 GMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTF 469
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FCKN V + LE I+ G +P VTY TL+++YC++G +N L M
Sbjct: 470 NSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNL 529
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+++ P +VTYT ++ GLCK+ K+ E+ QL M +GL+PD ++YNT+I +CK M++
Sbjct: 530 KDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRK 589
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL +M+ + + P T +++ G + G + A ++V LQ +++++ Y +I
Sbjct: 590 AFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIK 649
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
A C A + ++ + G+ S++ Y+ ++ LCK + +A M+ + P
Sbjct: 650 AHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSP 709
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ ++ F G L+ M++ G+L D
Sbjct: 710 DQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 177/419 (42%), Gaps = 19/419 (4%)
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ FK R LD Q + S + V +M + P+ T+N L
Sbjct: 76 KRRFKDLRLVLDQMLQEEVAS-----------RMVHDALFVLVKMKEQNLRPSIQTYNSL 124
Query: 247 THVFCKNGDV--DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
+ ++ D+ D N I++ G T + ++ C + R DA R +
Sbjct: 125 LYNL-RHTDIMWDVYN----DIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGK 179
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
P +V++ T+M+ CK G A F M+ G+ PD SYN LI G M+E+
Sbjct: 180 EFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEA 239
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE-LQRFGVSISRDIYDYLIV 423
L +M G+ PD T +I+ +G+ G + A ++ + L G+ Y LI
Sbjct: 240 LELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLIC 299
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ A L + G+ ++ +Y+ L+ SLCK V +AL L EM N++P
Sbjct: 300 GHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQP 359
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L TY LI C G+ +A+ L EM + + P+S ++ G C + ++ A
Sbjct: 360 DLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYF 419
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D YN + + + + GD+ + + L KR P+ +T +I+ K
Sbjct: 420 DSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 103/243 (42%), Gaps = 9/243 (3%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ +++ L N +I+PT Y +++ L K ++++L ++ K
Sbjct: 512 CEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM--RAKGLAP 569
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ +I C + K +R++F+ L +P+ + N L++GL + +
Sbjct: 570 DQITYNTIIQC-------FCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDV 622
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ +V + I + + C GD + ++ E+GF+ + Y+ +
Sbjct: 623 EDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ CK+ +N+A Y + IM V PD + ++N + G V +L M+ GL
Sbjct: 683 INRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742
Query: 342 SPD 344
D
Sbjct: 743 LHD 745
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 191/386 (49%), Gaps = 14/386 (3%)
Query: 184 GLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I + K F + L D +P++++ L+ + ID+ ++ +EM G+ P+T T
Sbjct: 93 GKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFT 152
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N++T CK G VD+ F+ + G PD++TYN L+ + +G+ ++ ++
Sbjct: 153 YNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIF 212
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R P++VTY+ L++ LC++GK+ E+ L M +GL+PD Y+ LI A+C+EGK+
Sbjct: 213 SRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLD 272
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L M+ +G PD I+ K G A+ + +L G + Y+ ++
Sbjct: 273 MAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTML 332
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
AL + A ++ ++ G P + YN L+ LC+ V +A+ L +M+ +
Sbjct: 333 SALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQ 392
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ +Y+ ++ C R +A+ ++ M+E+G P+ +LI G
Sbjct: 393 PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEG------------- 439
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAED 568
+GF + Q + + + N +ED
Sbjct: 440 IGFSGSRTQAMELANSLYIMNAISED 465
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 189/404 (46%), Gaps = 2/404 (0%)
Query: 201 FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+QP ++ C L+ G ID+ +V + + G P+ +N + FCK ++
Sbjct: 6 YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAK 64
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR-IMYRRNVLPDLVTYTTLMNG 319
L++++ +GF PD+VT+N +I ++C KG+++ A ++ ++ N P L+TYT L+
Sbjct: 65 TVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEA 124
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
EG + EA +L M+ RGL PD +YN + CKEGK+ + + + G PD
Sbjct: 125 YILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPD 184
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I+++ +G+ + E+ G + Y LI +LC+D + + +L++
Sbjct: 185 VITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK 244
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P Y+ L+ + C+ + A+ D M+ P + Y ++ C G
Sbjct: 245 VMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNG 304
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
AV + ++ E G P+ +++ D +A ++ K D +YN
Sbjct: 305 NGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYN 364
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ + DG + + + L L F PN ++ K ++ L K
Sbjct: 365 SLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKA 408
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 192/409 (46%), Gaps = 13/409 (3%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+++ + SA T + +K P + +++ K A+K+ EL++ +C
Sbjct: 55 CKANRIESAKTVLDRMKRK-GFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLK-DNNCK 112
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
++ + LI AY+ G I E+ K + L G +P + N + GL K
Sbjct: 113 PTLITYTILIE-------AYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++ + G P+ T+NIL G D+ ++ +I G +P++VTY+
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LISS C+ G++ ++ L ++M + + PD Y L+ C+EGK+ A + M+ G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PDIV+YNT++ A CK G + + ++ G P+ + ++ G AL
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRAL 345
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ ++ G+ Y+ LI LC+D A LL + + P++ Y ++ L
Sbjct: 346 GMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGL 405
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
CK + DA+ + M++ +P+ +TY LI GIG SG M+
Sbjct: 406 CKAHRIDDAIEVLAAMIENGCQPNETTYTLLI---EGIGFSGSRTQAME 451
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 162/362 (44%), Gaps = 37/362 (10%)
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L F + ++DK + +E+ G PD+ YN +IS +CK R+ A + M R+
Sbjct: 16 LIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH-RGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+VT+ ++ C +GK+ A ++F ++ P +++Y LI AY EG + E+
Sbjct: 75 FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEA 134
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
LL EM+ G+ PDTFT +I +G KEG++ A V L G Y+ L+ A
Sbjct: 135 LKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRA 194
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
L + + I G P++ Y+ L+ SLC+ + +++ L M ++ + P
Sbjct: 195 LLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPD 254
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
Y LI FC G+ A+ +D M+ G LPD ++N
Sbjct: 255 AYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPD------IVN---------------- 292
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
YN + ++G+ +E+ + +G PN + M+ +LW
Sbjct: 293 -------------YNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339
Query: 605 ER 606
+R
Sbjct: 340 DR 341
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 162/323 (50%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N L+N +L +D + V ++ ++G P+ TF+ L + C + F +++
Sbjct: 123 NILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVA 182
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
G+ P+L TYNT+I +CK G+ A L + M + PD+V Y T+++GLCK+ V E
Sbjct: 183 SGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSE 242
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A +F + +G+ PD+ +Y+ L+ C + +E+ +L EMM I PD T I+V
Sbjct: 243 ALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVD 302
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
KEG L A ++ + GV + Y+ L+ C N+ F A + + + G +P
Sbjct: 303 KLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMP 362
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ YN L+ CK + +A L DEM R + P+ Y LI C GR EA L
Sbjct: 363 NVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELF 422
Query: 509 DEMLESGMLPDSQICRVLINGYC 531
+M G PD C +L++ C
Sbjct: 423 KDMQAQGCSPDLVTCTILLDSLC 445
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 48/396 (12%)
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFK 191
+V I + S + ++ EL+ + +D H F LI+C + ++ + +F
Sbjct: 94 LVRIKHYGTVLSLSKRI--ELLRIERDVFH----FNILINC-------FSRLQRVDFAFS 140
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFC 251
K + +GF+P V+ + L+NGL + + + ++EM G PN HT+N + FC
Sbjct: 141 VLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200
Query: 252 KNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK----------------KGRLNDAF 295
K G G L+K+++ G PD+V YNT+I CK KG D F
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260
Query: 296 Y-------------------LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
L+ M N++PD+VT+ L++ LCKEG + EA + M
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIM 320
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ +G+ P+ +YN+L+ YC + K+ E++ + M+ G P+ + I++ GY K R+
Sbjct: 321 IEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRI 380
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A L E+ G+ + Y+ LI LCQ R A L + + G P L L
Sbjct: 381 DEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTIL 440
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
++SLCK + +AL L M D +KP+L TY LI
Sbjct: 441 LDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 185/400 (46%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P IV + LL+ L+++ + + + + I + FNIL + F + VD
Sbjct: 82 PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L KI + GF+PD VT+++LI+ C + + A + M P+L TY T++ G CK
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GK A L +M G PDIV YNT+I CK+ + E+ + E+ G G+ PD FT
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I++ G + A L E+ + ++ L+ LC++ A +++ +
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P+ YN LM C + V +A ++ D M+ + P++ +Y LI +C R
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRID 381
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L DEM G++P++ LI+G C +A L + D + +
Sbjct: 382 EARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILL 441
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G L + L + PN +T +I +++K
Sbjct: 442 DSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 136/248 (54%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
L+ E+ F + G +P + + + L++GL + ++ ++ EM + I P+ TFN
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFN 298
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
IL CK G + + G ++ + E+G +P+ TYN+L++ YC + ++ +A ++ M +
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+P++V+Y L+NG CK ++ EA +LF M RGL P+ +YNTLI C+ G+ E+
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA 418
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ L +M G PD TC I++ K G L +AL L +Q + + YD LI A
Sbjct: 419 RELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Query: 425 LCQDNRPF 432
+ + + +
Sbjct: 479 MYKSGKIY 486
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 11/261 (4%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+ VS AL F+ +K ++P Y +++H L +++ A + E++ L +
Sbjct: 235 CKDRLVSEALDIFSEIKGK-GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL--NIM 291
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
V F L+ K G++ E+ + ++ G +P+ + N L+NG N
Sbjct: 292 PDVVTFNILVD-------KLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNK 344
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + V++ M G PN ++NIL + +CK +D+ +++ G P+ YNT
Sbjct: 345 VFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNT 404
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LIS C+ GR +A L++ M + PDLVT T L++ LCK G + A +LF M
Sbjct: 405 LISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSC 464
Query: 341 LSPDIVSYNTLIFAYCKEGKM 361
L P++V+Y+ LI A K GK+
Sbjct: 465 LKPNLVTYDILIRAMYKSGKI 485
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 66/156 (42%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P + +++L+ +L + L L + I+ + + LI CF + R A S
Sbjct: 81 LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFS 140
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ ++++ G PD+ LING C E +A + +YN + F
Sbjct: 141 VLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFC 200
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ G + + L K+ + G P+ + +I L K
Sbjct: 201 KIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236
>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Vitis vinifera]
Length = 580
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 183/396 (46%), Gaps = 38/396 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ R+ L++G P+ + N + G N +D+ ++ M GI PN
Sbjct: 178 KAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKV 237
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEE-------------------------------- 269
T+NIL H CK G + LEKI ++
Sbjct: 238 TYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHW 297
Query: 270 ------GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
G D+V YN LI +C +N A+ + M++R +LPD+ TY TL++G CK
Sbjct: 298 DEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKI 357
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G + EA + M G +PD++SY +I C G + + L M+ N + P+
Sbjct: 358 GNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIW 417
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
+++ G+G+ G L +AL++ ++ FG+ + Y+ LI A + A S+ + +
Sbjct: 418 NVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLL 477
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+G P + YN L+ + C + AL L DEM+ R +P + TY LI FC G E
Sbjct: 478 NGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVME 537
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
A L+ ++ SG+ D ++LI YC + +A
Sbjct: 538 AEELLAKLQRSGLSIDHAPFQILIQKYCRTRVPGRA 573
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 193/437 (44%), Gaps = 39/437 (8%)
Query: 146 MKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSI 205
+KM+ E V L K + + D C ++ G +R + K + G P +
Sbjct: 108 LKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLE-GKLRAALWLRNKMIQKGVIPDV 166
Query: 206 VSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEK 265
++ N+L+NGL K +++ + EM IG PN TFN +C N +VDK
Sbjct: 167 LTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFST 226
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL---------------------------- 297
+ G P+ VTYN LI + CKKG L DA L
Sbjct: 227 MANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLK 286
Query: 298 ----------YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
+ M +R D+V Y L++G C + A++ F M RGL PDI +
Sbjct: 287 KGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFT 346
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YNTLI +CK G + E+ + M G PD + ++I+QG G ++ A +V +
Sbjct: 347 YNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCML 406
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ I++ +I + A S+ +++ G P++ YN L+ + K ++
Sbjct: 407 ENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIV 466
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
DA +K EM+ I P + TY LI C GR A+ L DEML G PD LI
Sbjct: 467 DAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELI 526
Query: 528 NGYCMEKDVNKAEALLG 544
G+C+ V +AE LL
Sbjct: 527 RGFCIRGHVMEAEELLA 543
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 179/407 (43%), Gaps = 38/407 (9%)
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
+M + G+ P+ T N L + CK GD++K + + ++ E G P+ T+NT I YC
Sbjct: 156 KMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNN 215
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR-------------- 335
++ A YL+ M + P+ VTY L++ LCK+G +++A +L +
Sbjct: 216 NVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDCGKETSDII 275
Query: 336 ------------------------MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
M+ RG D+V+YN LI +C M + EM
Sbjct: 276 TSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEM 335
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G+ PD FT ++ G+ K G L A + + + G + Y +I LC
Sbjct: 336 FKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDV 395
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L + ++ VP I+N +++ + +++AL ++D+MV I P++ TY AL
Sbjct: 396 IRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYNAL 455
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I G +A S+ EML +G+ PD +LI C ++ A L ++
Sbjct: 456 IHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRRGY 515
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
D +Y + F G + + EL + R G + ++ + +I
Sbjct: 516 EPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQILIQ 562
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 164/332 (49%), Gaps = 3/332 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLD--VGFQPS-IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
A K GL++++ K K LD G + S I++ ++G LK + Q ++EM + G
Sbjct: 245 ALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRG 304
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+ +N+L H FC D++ + ++ + G PD+ TYNTLIS +CK G L++A
Sbjct: 305 TQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEAC 364
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
Y++ +M + PDL++Y ++ GLC G V A+Q M+ + P+ + +N +I +
Sbjct: 365 YIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGH 424
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ G + + S+ +M+ GI P+ FT ++ K G ++ A ++ E+ G+
Sbjct: 425 GRHGDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDV 484
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y+ LI A C R A L + + + GY P + Y EL+ C V +A L +
Sbjct: 485 VTYNLLIGAACNFGRIHFALRLYDEMLRRGYEPDIITYTELIRGFCIRGHVMEAEELLAK 544
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ + + ++ LI +C G A L
Sbjct: 545 LQRSGLSIDHAPFQILIQKYCRTRVPGRAYDL 576
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 150/327 (45%), Gaps = 3/327 (0%)
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+I + C +G+L A +L M ++ V+PD++T+ L+NGLCK G + +A L M+
Sbjct: 136 AMIRNLCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEI 195
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G SP+ ++NT I YC + ++ L M +GI P+ T I++ K+G L A
Sbjct: 196 GPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDA 255
Query: 400 LNLVVEL--QRFGVSISRDIYDYLIVALC-QDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L+ ++ G S I + + C + A + + Q G + YN L
Sbjct: 256 RKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVL 315
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ C + A EM R + P + TY LI FC IG EA + M + G
Sbjct: 316 IHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGA 375
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
PD +++I G C+ DV +A L + + + +N V + GDLS +
Sbjct: 376 APDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALS 435
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ + + G PN T +IH+ KG
Sbjct: 436 IRDQMVSFGIPPNVFTYNALIHAQIKG 462
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 163/351 (46%), Gaps = 3/351 (0%)
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
C G + K+ ++G PD++T+N L++ CK G L A L R M P+
Sbjct: 141 LCLEGKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPN 200
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
T+ T + G C V +A LF M + G+ P+ V+YN LI A CK+G +++++ LL
Sbjct: 201 CATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLE 260
Query: 370 EMMGNGI---YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
+++ + D T I + G K+G ++ AL E+ + G I Y+ LI C
Sbjct: 261 KILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFC 320
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+A + + G +P + YN L+ CK ++ +A + M P L
Sbjct: 321 LIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLI 380
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
+Y+ +I C G A + MLE+ M+P+ I V+I+G+ D++ A ++
Sbjct: 381 SYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQM 440
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +YNA+ + + G++ ++K L G P+ +T +I
Sbjct: 441 VSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLI 491
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 145/568 (25%), Positives = 252/568 (44%), Gaps = 65/568 (11%)
Query: 88 PHLGAHEISRVLLRCQSDS----VSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
P L IS V R SD +S LTFF+++ + P + ++++ L KF+
Sbjct: 24 PSLQFDLISHVTYRVLSDPTLPPLSCLTFFHFLPS-----PDLNARLILLYRLFAARKFA 78
Query: 144 FAMKML---------------CELVELVKDC---PHSVDVFQDLI--------------- 170
AM+ L ++V LV +C PH V+ D++
Sbjct: 79 -AMRTLLDSLVTTEVETKRPVSDVVSLVDECEFEPHFVETLCDMLFRVCADNRMFRDALK 137
Query: 171 ---------------SC-TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
SC + CN + V R ++ R +D+G Q S +++
Sbjct: 138 VFDYVMEKGLVVEGRSCFXKKCNKVELCVRFFRRMVESGR--VDIGVQ----SLTIVVDV 191
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
L + + + ++ EM G+ P T+N L + D + V+ L +E EG
Sbjct: 192 LCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVAS 251
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
LVTY LI Y R+ +A +Y M RNV D+ YT++++ C+ G VR A LF
Sbjct: 252 LVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFD 311
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M+ RG+ P+ ++ LI CK G+M+ ++ LL EM G+ + ++ GY K G
Sbjct: 312 EMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRG 371
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ A L ++R G Y+ L LC+ +R A +L + + G P++
Sbjct: 372 MMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCA 431
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+E C+ ++A+ + R + P++ TY LI + + +A L EM+E
Sbjct: 432 TFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEK 491
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+LPD LI+G C+ V++A L K + ++Y A+ + +++G +
Sbjct: 492 GLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEA 551
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++L +R+G P++ + ++ SL K
Sbjct: 552 LKLYDEMMRMGLIPDDRVFEALVGSLHK 579
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 166/340 (48%), Gaps = 9/340 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y +++ A + + A K+ E+ E ++ V V+ +IS W + G +R
Sbjct: 254 TYTILIEWYASSERIGEAEKVYEEMCE--RNVEMDVYVYTSMIS------WN-CRAGNVR 304
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
+ F + + G P+ + L++G+ K ++ + EEM G+ N FN +
Sbjct: 305 RASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMM 364
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+CK G +D+ + +E +GF+ D+ TYN L S CK R +A + +M + V
Sbjct: 365 DGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVA 424
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VT T + C+EG + E + + RG+ P+IV+YNTLI AY K K++++ L
Sbjct: 425 PNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXL 484
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
EM+ G+ PD FT ++ G ++ AL L E+ G+ + Y +I L +
Sbjct: 485 KAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSK 544
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ R A L + + + G +P ++ L+ SL K S A
Sbjct: 545 EGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHKPSSHA 584
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 202/426 (47%), Gaps = 21/426 (4%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y ++G SF F L G+ ++ L+ GL I + ++++ G N
Sbjct: 57 YSQLGQNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLN 116
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++ L + CK G FL +I+ + PD+V YNT+I CK +NDAF LY
Sbjct: 117 QVSYGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYF 176
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M + + P +VTY TL+ GLC ++++A L H+M+ ++P + +++ LI A+CKEG
Sbjct: 177 EMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEG 236
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
KM+E+K++ MM + P+ T ++ G+ +N+V + ++ I++
Sbjct: 237 KMKEAKNVFAVMMKEDVKPNIVTYNSLMDGH-------HLVNVVKK--------AKSIFN 281
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I + + A +L E + P + IYN L++ LCK AL EM R
Sbjct: 282 TMIKMVDE------AMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYR 335
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + TY +L+ C +A+ L+ ++ + G+ P +LING C + A
Sbjct: 336 GQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDA 395
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
E + K D +YNA+ F + G + + + + G +P+ C+ +I S
Sbjct: 396 EKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIIIRS 455
Query: 600 LWKGME 605
L+ E
Sbjct: 456 LFDKGE 461
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 127/264 (48%)
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+++ +N P + + ++ L K L +M GL+ ++V+ + LI Y + G
Sbjct: 2 LLHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLG 61
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ S S+ ++ G D T +++G +G + AL+ ++ G +++ Y
Sbjct: 62 QNALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYG 121
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI LC+ + AA L RI P + +YN +++ LCK V DA L EMV +
Sbjct: 122 TLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
I PS+ TY LIC C + + +A+ L+ +M+ + P +LI+ +C E + +A
Sbjct: 182 RICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEA 241
Query: 540 EALLGFFAKKFQIYDTESYNAVFN 563
+ + K+ + +YN++ +
Sbjct: 242 KNVFAVMMKEDVKPNIVTYNSLMD 265
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 235/529 (44%), Gaps = 28/529 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
RVL + A FFNW++ ++K + + ++ ILA N+ S A + ++L
Sbjct: 127 RVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDL- 185
Query: 157 KDCPHSVDVFQDLISCTED----------CNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
H +D LI + D W Y K + + +F K + GF PS+
Sbjct: 186 --GMHEIDDL--LIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVR 241
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L L +++ VYE M GI P TFN + K GD+++V+ ++
Sbjct: 242 NCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM 301
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ + VTYN LI+ + K G++ +A + M R ++ L+ G CK+G
Sbjct: 302 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 361
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A + M++ G+ P +YN I A C G++ +++ LL M PD + +
Sbjct: 362 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTL 417
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G+ + A L +L+ + S Y+ LI LC+ A L E +
Sbjct: 418 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 477
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + Y L++ K +++ A + DEM+ + IKP Y +G S +A
Sbjct: 478 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 537
Query: 507 LMDEMLESG-MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVF 562
L +EM+ + PD I V I+G C ++ KA + F K F++ D +Y V
Sbjct: 538 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA---IEFQRKIFRVGLVPDHVTYTTVI 594
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
+ E+G L LR P+ +T +I+ K +E+ FQ
Sbjct: 595 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 643
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 1/314 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K+G E+ F PSIV+ N L++GL + ++ ++ EEM I P
Sbjct: 420 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP 479
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L F KNG++ +++ +G PD Y T + G + AF L+
Sbjct: 480 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 539
Query: 299 RIMYRRNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + PDL Y ++GLCK G + +A + ++ GL PD V+Y T+I Y +
Sbjct: 540 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 599
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ + +++L EM+ +YP T +++ G+ K GRL A E+++ GV +
Sbjct: 600 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 659
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L+ +C+ A L ++ ++G P+ Y L+ C + + + L EM+
Sbjct: 660 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 719
Query: 478 DRNIKPSLSTYRAL 491
D+ I+P T+RAL
Sbjct: 720 DKEIEPDGYTHRAL 733
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 3/343 (0%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R+ L P +VS N L++G +K+ + +++++ I P+ T+N L C++
Sbjct: 400 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 459
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G+++ E++ + PD++TY TL+ + K G L+ A +Y M R+ + PD Y
Sbjct: 460 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 519
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
TT G + G +A +L MV +PD+ YN I CK G + ++ ++
Sbjct: 520 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 579
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ PD T +++GY + G+ A NL E+ R + S Y LI + R
Sbjct: 580 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 639
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + + G P++ +N L+ +CK ++ +A +M + I P+ +Y LI
Sbjct: 640 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
C + E V L EML+ + PD R L +EKD
Sbjct: 700 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK--HLEKD 740
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ N +F A + E+ L K SV + LI + + K
Sbjct: 585 PDHVTYTTVIRGYLENGQFKMARNLYDEM--LRKRLYPSVITYFVLI-------YGHAKA 635
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++F+ + G +P++++ N LL G+ K ID+ ++ +M GI PN +++
Sbjct: 636 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 695
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+L C ++V +++ ++ +PD T+ L
Sbjct: 696 TMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 733
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 174/350 (49%), Gaps = 1/350 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
VK+ + + T +G +P + + ++N L L + V M +IG+ P
Sbjct: 18 VKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTV 77
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF-YLYR 299
TF L + C G+V F + +E+ G++ + T+ T+I+ CK G A YL +
Sbjct: 78 VTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEK 137
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
I R L+ Y+T+M+ LCK+G + A F M +G+ PD+V+YN+LI C G
Sbjct: 138 IEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFG 197
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ E+ +LL MM GI P+ T ++V + KEG++ A ++ + GV Y+
Sbjct: 198 RWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYN 257
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C ++ A + E + G +P++ Y+ L+ CK ++ A+ + DEMV+
Sbjct: 258 SVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNN 317
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ + T+ LI FC GR A+ L M E LP+ Q C ++++G
Sbjct: 318 GLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDG 367
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 181/391 (46%), Gaps = 36/391 (9%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
F +G +P++V+ L+NGL + + + + +G N++T + +
Sbjct: 61 GFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIIN 120
Query: 249 VFCKNGDVDKVNGFLEKIE--EEGFD---------------------------------- 272
CK GD +LEKIE GFD
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQ 180
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
PDLV YN+LI C GR N+A L M R+ ++P++ T+ L++ CKEGK+ A +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
MVH G+ PD+V+YN++I +C +M ++ + M+ G+ P+ T ++ G+ K
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCK 300
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
+ A+ ++ E+ G+++ + LI C+ RP AA L + + +P+L+
Sbjct: 301 TRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQT 360
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+++ L KC ++A+ L +M N++ ++ TY ++ C G+ +A L +
Sbjct: 361 CAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLP 420
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
G+ D +I G C E ++ AE LL
Sbjct: 421 SKGIQIDVVAYTTMIKGLCKEGLLDDAEDLL 451
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 180/354 (50%), Gaps = 10/354 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ N L++GL ++ + M R GI PN TFN+L FCK G + +
Sbjct: 178 GIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRA 237
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ + G +PD+VTYN++IS +C ++NDA ++ +M + +LP++VTY++L++G
Sbjct: 238 KTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHG 297
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK + +A + MV+ GL+ D+V+++TLI +CK G+ + + L M + P+
Sbjct: 298 WCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPN 357
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
TC II+ G K A++L ++++ + ++ Y+ ++ +C + A L
Sbjct: 358 LQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFS 417
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC--- 496
+ G + Y +++ LCK + DA L +M + P+ TY L+
Sbjct: 418 CLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRY 477
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
I RS + + LM G+ D+ +LI+ + NK + L F +KF
Sbjct: 478 DISRSTKYLMLMK---GKGLSADATTTELLISYF----SANKENSALQVFLQKF 524
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 155/334 (46%), Gaps = 1/334 (0%)
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
G PD+ T +I+ C F + M++ V P +VT+ TL+NGLC EG V A
Sbjct: 37 GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAA 96
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQ 388
+ + G + ++ T+I CK G + S L ++ G N + I+
Sbjct: 97 ARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMD 156
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K+G L ALN + G+ Y+ LI LC R AT+LL + + G +P
Sbjct: 157 SLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMP 216
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+++ +N L+++ CK ++ A + MV ++P + TY ++I C + + +AV +
Sbjct: 217 NVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVF 276
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
+ M+ G+LP+ LI+G+C +++NKA +L D +++ + F +
Sbjct: 277 ELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKA 336
Query: 569 GDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G +EL PN TC ++ L+K
Sbjct: 337 GRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFK 370
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 45/316 (14%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL FF+ + I+P Y ++H L +++ A +L ++ K +V F
Sbjct: 167 ALNFFSGMTCK-GIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMR--KGIMPNVQTFNV 223
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ + K G I + + VG +P +V+ N +++G L+ ++ +V+
Sbjct: 224 LVD-------NFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVF 276
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M G+ PN T++ L H +CK +++K L+++ G + D+VT++TLI +CK
Sbjct: 277 ELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKA 336
Query: 289 GRLNDAFYLYRIMYRRNVLPDL-----------------------------------VTY 313
GR A L+ M+ + LP+L VTY
Sbjct: 337 GRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTY 396
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+++G+C GK +A +LF + +G+ D+V+Y T+I CKEG + +++ LL +M
Sbjct: 397 NIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEE 456
Query: 374 NGIYPDTFTCQIIVQG 389
NG P+ FT ++V+G
Sbjct: 457 NGCPPNEFTYNVLVRG 472
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 211/433 (48%), Gaps = 35/433 (8%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIVS N +++ K+ ID + M + G+ ++ ++NIL H C G +D+ GF
Sbjct: 269 PSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGF 328
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ +E+ G +PD+VTYNTL + G ++ A + + M + + PDLVTYTTL+ G C+
Sbjct: 329 TDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQ 388
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G + EA +L + RG +++ YN L+ CK G+++E+ +L EM + PD
Sbjct: 389 MGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIV 448
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQ---RF-----------------GVSISRD------ 416
I++ G KEG + A L +++ +F +S +R+
Sbjct: 449 YSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWT 508
Query: 417 ---------IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+Y+ +I + + A L ++ + G PS+ +N L+ C+ +
Sbjct: 509 RMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLM 568
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A + + + + + PS+ TY L+ +C +G E + EM + ++P VLI
Sbjct: 569 EARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
G C + ++++ LL + K + D+ +YN + F + +++K ++L L
Sbjct: 629 KGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCD 688
Query: 588 PNNLTCKYMIHSL 600
P +T K +I++L
Sbjct: 689 PTQVTYKVLINAL 701
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 208/426 (48%), Gaps = 8/426 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ ++G I E+ K ++TL GF+ +++ N LL+ L K+ I++ +++EM + + P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ ++IL H CK G V + E++ + P ++ K G +++A +
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYF 504
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R +++ D+V Y +++G + + EA QL+++M+ RG++P +V++NTLI +C+
Sbjct: 505 DTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRR 564
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + E++ +L + G+ P T ++ Y + G + + + E++ V + Y
Sbjct: 565 GDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTY 624
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC+ N+ + LLE + G +P YN +++ CK + AL L + M+
Sbjct: 625 TVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLL 684
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
N P+ TY+ LI C G + ++ + + + +I +C + V+K
Sbjct: 685 HNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSK 744
Query: 539 AEALLGFF----AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
A LG+F AK F I Y+AV N + G +++ L G P+ CK
Sbjct: 745 A---LGYFNQMLAKGFVI-SIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPEICK 800
Query: 595 YMIHSL 600
++++
Sbjct: 801 TVLNAF 806
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 184/405 (45%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG I E+ F + + +P + + L++GL K + + +Q+YE+M P+
Sbjct: 423 KVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHF 482
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ KNG++ + + + D+V YN +I Y + + +A LY M
Sbjct: 483 AQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKM 542
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R + P +VT+ TL+NG C+ G + EA ++ + +GL P +V+Y TL+ AYC+ G M
Sbjct: 543 IERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNM 602
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
QE L+EM N + P T ++++G ++ ++ +L L+ + G+ Y+ +
Sbjct: 603 QEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTI 662
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ A L + P+ Y L+ +LC + D + + DRNI
Sbjct: 663 IQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNI 722
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
TY +I C G+ +A+ ++ML G + + +IN C + +A+
Sbjct: 723 TLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKY 782
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+ D E V N F + G+ S + E ++ GF
Sbjct: 783 FFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 196/409 (47%), Gaps = 10/409 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
ALT F+ ++ L ++P Y +++H L A + L E + L + PH
Sbjct: 430 ALTLFDEMET-LRLEPDFIVYSILIHGLCKEGFVQRAYQ-LYEQMRLKRKFPHHFAQRAV 487
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ ++ N I E+ F + +V N +++G ++L+ I + Q+Y
Sbjct: 488 LLGLFKNGN--------ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLY 539
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
+M GI P+ TFN L + FC+ GD+ + LE I +G P +VTY TL+++YC+
Sbjct: 540 YKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEV 599
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + + F+ M V+P VTYT L+ GLC++ K+ E+ QL M +GL PD V+Y
Sbjct: 600 GNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTY 659
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
NT+I +CK ++ ++ L M+ + P T ++++ G L +VV ++
Sbjct: 660 NTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED 719
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+++ + Y +I A C + A ++ G+V S+ Y+ ++ LCK + +
Sbjct: 720 RNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITE 779
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
A M+ + P + ++ F G + + +++SG +
Sbjct: 780 AKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 35/423 (8%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G +P +V+ N L G L L + +V ++M G+ P+ T+ L C+ G++++
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++ GF +++ YN L+S CK GR+ +A L+ M + PD + Y+ L++G
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455
Query: 320 LCKEGKVREAHQLF----------HRMVHRG-------------------------LSPD 344
LCKEG V+ A+QL+ H R L D
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+V YN +I Y + + E+ L Y+M+ GI P T ++ G+ + G L+ A ++
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLE 575
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ G+ S Y L+ A C+ L + + VP+ Y L++ LC+ +
Sbjct: 576 VIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQN 635
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ ++L L + M + + P TY +I CFC +A+ L + ML P +
Sbjct: 636 KMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYK 695
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
VLIN C+ D+ + ++ + +Y + G +SK + + L
Sbjct: 696 VLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAK 755
Query: 585 GFA 587
GF
Sbjct: 756 GFV 758
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 232/550 (42%), Gaps = 76/550 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ FF ++ N+ + + + ++ HILA +F EL ++K+ + V Q
Sbjct: 100 AVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFK-------ELDSVIKN----LIVDQG 148
Query: 169 LISCTEDC--------NW------------AYVKVGLIRESFKTFRKTLDVGFQPSIVSC 208
L S + C NW AY + +I ++ K D+ FQ S+ +
Sbjct: 149 LGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTY 208
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LL+ + D W VY E+ G + T +IL H C+ ++ FL
Sbjct: 209 NSLLH---NMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SN 264
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+ P +V+ NT++S +CK G ++ A + +M + +L D +Y L++GLC G + E
Sbjct: 265 KVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDE 324
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A M G+ PD+V+YNTL + G M ++ ++ +M+ G+ PD T ++
Sbjct: 325 ALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLIC 384
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G+ + G + AL L E G ++ Y+ L+ LC+ R A +L + + P
Sbjct: 385 GHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEP 444
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG------ 502
+Y+ L+ LCK V A L ++M + P RA++ G+ ++G
Sbjct: 445 DFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL---LGLFKNGNISEAR 501
Query: 503 --------------------------------EAVSLMDEMLESGMLPDSQICRVLINGY 530
EA+ L +M+E G+ P LING+
Sbjct: 502 NYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGF 561
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C D+ +A +L K + +Y + N + E G++ ++ P +
Sbjct: 562 CRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTH 621
Query: 591 LTCKYMIHSL 600
+T +I L
Sbjct: 622 VTYTVLIKGL 631
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 163/317 (51%), Gaps = 7/317 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +VS + ++NG K +D+ I PN T+N + CK VDK
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKMLDQR-------ISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + G PD +TYN+++ +C G+ +A + M V PD+VTY +LM+ LCK
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ EA ++F M RGL PDI +Y TL+ Y +G + E LL M+ NGI+P+ +
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+V Y K+ ++ A+ + ++++ G++ + Y +I LC+ R A E++
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P +YN L+ SLC D A L EM+DR I S + ++I C GR
Sbjct: 319 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378
Query: 503 EAVSLMDEMLESGMLPD 519
E+ L D M+ G+ PD
Sbjct: 379 ESGKLFDLMVRIGVKPD 395
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 176/348 (50%), Gaps = 9/348 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTHTFNILTHVFCKNGDVDKVN 260
P + S N LLNGL N + ++ M G P+ +++ + + F K GD+DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ ++ P++VTYN++I++ CK ++ A + M + V+PD +TY ++++G
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G+ +EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ PD
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++QGY +G L+ L+ + R G+ + ++ L+ A + + A + +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ Q G P+ Y +++ LCK V DA+L ++M+D ++P Y +LI C +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+A L EML+ G+ + +I+ +C E V ++ L +
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVR 389
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 203/457 (44%), Gaps = 44/457 (9%)
Query: 102 CQSDSVSALTFFN--WVKNDLE------IKPTSSNYCLIVHILAWNNKFSFAMKMLCELV 153
C D VS T N + + DL+ I P Y I+ L AM++L +V
Sbjct: 84 CPPDVVSYSTVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMV 143
Query: 154 E--LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+ ++ DC + + G +E+ +K G +P +V+ N L
Sbjct: 144 KSGVMPDCMTYNSIVH-----------GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSL 192
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++ L K + ++++ M + G+ P+ T+ L + G + +++G L+ + G
Sbjct: 193 MDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 252
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
P+ ++ L+ +Y K+ ++ +A ++ M ++ + P+ VTY T+++ LCK G+V +A
Sbjct: 253 HPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML 312
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
F +M+ GL PD + YN+LI + C K ++++ L EM+ GI T I+ +
Sbjct: 313 YFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHC 372
Query: 392 KEGRLLSALNL------------VVELQRFGVSISRD------IYDYLIVALCQDNRPFA 433
KEGR++ + L ++ L RF S RD IY ++ +
Sbjct: 373 KEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIY-FIFTNMSNTGDKEK 431
Query: 434 ATSLLERIGQDGY----VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
T + G P L YN ++ LCK DAL + + ++K T+
Sbjct: 432 ETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFN 491
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+I +GR+ EA L +G++P+ R++
Sbjct: 492 IMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 528
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 15/323 (4%)
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNT 350
DA +++ + RR + PD+ +Y L+NGLC E + +EA +L H M G PD+VSY+T
Sbjct: 35 DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I + KEG + +M+ I P+ T I+ K + A+ ++ + + G
Sbjct: 94 VINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
V Y+ ++ C +P A L+++ DG P + YN LM+ LCK +A
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ D M R +KP ++TY L+ + G E L+D M+ +G+ P+ + +L+ Y
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
++ V +A + ++ + +Y V ++ + G + M ++ + G P++
Sbjct: 267 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 326
Query: 591 LTCKYMIHSL-----WKGMERKF 608
+ +IHSL W+ E F
Sbjct: 327 IVYNSLIHSLCIFDKWEKAEELF 349
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 50/276 (18%)
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTCQ 384
+A +F ++ RG+ PD+ SYN L+ C E + QE+ LL+ M +G PD +
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ KEG L L+ +RI
Sbjct: 93 TVINGFFKEGDLDKMLD-------------------------------------QRIS-- 113
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
P++ YN ++ +LCK +V A+ + MV + P TY +++ FC G+ EA
Sbjct: 114 ---PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEA 170
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ + +M G+ PD L++ C +A + K+ D +Y +
Sbjct: 171 IVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQG 230
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNN-----LTCKY 595
+A G L ++ L +R G PN+ L C Y
Sbjct: 231 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 123/283 (43%), Gaps = 21/283 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F + +D G +P + N L++ L + ++ +++ EM GIC +T
Sbjct: 303 KSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTI 362
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL-NDAFYLYRI 300
FN + CK G V + + + G PD++T + S + L + ++++
Sbjct: 363 FFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTN 422
Query: 301 MYR--------------------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
M + P L TY +++GLCK +A ++F +
Sbjct: 423 MSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMD 482
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
L + ++N +I A K G+ E+K L NG+ P+ +T +++ + +G L
Sbjct: 483 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 542
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
L + ++ G ++ + ++++ L Q A + L I +
Sbjct: 543 QLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 585
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 121/300 (40%), Gaps = 27/300 (9%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+S V A+ +F + D ++P S Y ++H L +K+ A ++ E+++ +
Sbjct: 302 CKSGRVEDAMLYFEQMI-DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD--RGIC 358
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCN-FLLNGLLKLN 219
S F +I ++ K G + ES K F + +G +P I++ FL + +
Sbjct: 359 LSTIFFNSIID-------SHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYS 411
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ ++ M G N NG G P L TYN
Sbjct: 412 LFVNIYFIFTNMSNTGDKEKETPVN--------------TNGGNTASNSSG-GPFLGTYN 456
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
++ CK +DA +++ + ++ + T+ +++ L K G+ EA LF
Sbjct: 457 IILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 516
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
GL P+ +Y + +G ++E L M NG D+ IV+ + G + A
Sbjct: 517 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 576
>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
Length = 593
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 181/369 (49%), Gaps = 10/369 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I ++ R+ ++G P+ VS N L+ GL +N +D+ ++ M + GI PN
Sbjct: 168 KAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP-------DLVTYNTLISSYCKKGRLNDA 294
T NI+ H C+ G + N +K+ EE D D+V L+ S K G + A
Sbjct: 228 TCNIIVHALCQKGVIGNNN---KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQA 284
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+++ M ++NV D V Y ++ GLC G + A+ MV RG++PD+ +YNTLI A
Sbjct: 285 LEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CKEGK E+ L M G+ PD + ++I+QG G + A ++ + + +
Sbjct: 345 LCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE 404
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+++ +I + +A S+L + G P++ N L+ K + DA +K+
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EM I P +TY L+ C +G A L DEML G PD L+ G C +
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 535 DVNKAEALL 543
+ KAE+LL
Sbjct: 525 RLKKAESLL 533
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 170/368 (46%), Gaps = 9/368 (2%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKI-EEEGFDPD--LVTYNTLISSYCKKGRLNDAFYLYR 299
FN+L ++ +D++ E + + + FD D L +++++ C +G+L+ A +L +
Sbjct: 88 FNVLDYIL--KSSLDRLASLRESVCQAKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRK 145
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M V+P L+T+ L+NGLCK G + +A L M G SP+ VSYNTLI C
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVN 205
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA----LNLVVELQRFGVSISR 415
+ ++ L M GI P+ TC IIV ++G + + L +++ + +
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
I L+ + ++ A + + + Q +YN ++ LC ++ A +
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
MV R + P + TY LI C G+ EA L M G+ PD +V+I G C+ D
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
VN+A L K + + +N V + + GD S + + L G PN T
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 596 MIHSLWKG 603
+IH KG
Sbjct: 446 LIHGYVKG 453
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
IV C L++ K + Q +V++EM + + ++ +N++ C +G++ GF+
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+ + G +PD+ TYNTLIS+ CK+G+ ++A L+ M V PD ++Y ++ GLC G
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 325 KVREAHQ-----------------------------------LFHRMVHRGLSPDIVSYN 349
V A++ + + M+ G+ P++ + N
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI Y K G++ ++ + EM I+PDT T +++ G L A L E+ R
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG----YVPSL 450
G Y L+ LC R A SLL RI G +VP L
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFL 549
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L++ L K D+ ++ M G+ P+ ++ ++ C +GDV++
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
N FL + + P+++ +N +I Y + G + A + +M V P++ T L++G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
K G++ +A + + M + PD +YN L+ A C G ++ + L EM+ G PD
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
T +V+G +GRL A +L+ +Q G++I D +LI+A
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITI--DHVPFLILA 552
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P ++ N +++G + V M G+ PN +T N L H + K G +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ PD TYN L+ + C G L AF LY M RR PD++TYT L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+G++++A L R+ G++ D V + L Y + + E+
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + L G +P++ + N L++G +K + W V EM I P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+N+L C G + +++ G PD++TY L+ C KGRL A L
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV---HRGLS-PDIVSY 348
+ + D V + L + + EA+ ++ + + +RG+S P I+++
Sbjct: 534 SRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVSCPSILNH 587
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 194/420 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F F + + PSIV LL L + ++M GI + ++F IL
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+ + L K+ + G++P +VT+ +L+ +C R+ DAF L +M +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y TL++GLCK G++ A +L + M +GL D+V+YNTL+ C G+ ++ +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +MM I PD T ++ + K+G L A L E+ + V + Y+ +I LC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R + A + + G P++ YN L+ CK V + + L M + T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI +C +G+ A+ + M+ + PD +L++G C+ ++ A
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + +YN + + + + K EL R G P+ T MI L K R+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 190/390 (48%), Gaps = 9/390 (2%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
++ +++H ++ SFA+ +L ++++L + S+ F L+ + V I
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYE--PSIVTFGSLLH-------GFCLVNRIG 158
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F + G++P++V N L++GL K ++ ++ EM + G+ + T+N L
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
C +G L + + +PD+VT+ LI + K+G L++A LY+ M + +V
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+ VTY +++NGLC G++ +A + F M +G P++V+YNTLI +CK + E L
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M G D FT ++ GY + G+L AL++ + V+ + L+ LC
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ +A + + + + YN ++ LCK D V A L + +KP T
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGML 517
Y +I C G EA L+ M E G++
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 11/385 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESF--KTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
H + F LI C C+ R SF K + +G++PSIV+ LL+G +
Sbjct: 104 HDLYSFTILIHCFCRCS---------RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N I + + M + G PN +N L CKNG+++ L ++E++G D+VTY
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
NTL++ C GR +DA + R M +R++ PD+VT+T L++ K+G + EA +L+ M+
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+ P+ V+YN++I C G++ ++K M G +P+ T ++ G+ K +
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ L + G + Y+ LI CQ + A + + P + + L+
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
LC + AL+ D+M + + Y +I C + +A L + G+ P
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 519 DSQICRVLINGYCMEKDVNKAEALL 543
D++ ++I G C +A+ L+
Sbjct: 455 DARTYTIMILGLCKNGPRREADELI 479
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + S L++ + + + V +M ++G P+ TF L H FC +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ + + G++P++V YNTLI CK G LN A L M ++ + D+VTY TL+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC G+ +A ++ M+ R ++PD+V++ LI + K+G + E++ L EM+ + + P+
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I+ G GRL A + G + Y+ LI C+ L +
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
R+ +G+ + YN L+ C+ + AL + MV R + P + T+ L+ C G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
A+ D+M ES ++I+G C V KA L + D +Y
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Query: 560 AVFNMFAEDGDLSKLMELQKR 580
+ ++G + EL +R
Sbjct: 461 IMILGLCKNGPRREADELIRR 481
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 12/297 (4%)
Query: 118 NDLEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTE 174
N++E K ++ Y ++ L ++ ++S A +ML ++++ + V F LI
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK--RSINPDVVTFTALID--- 254
Query: 175 DCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+VK G + E+ + +++ + P+ V+ N ++NGL + + ++ M
Sbjct: 255 ----VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G PN T+N L FCK VD+ +++ EGF+ D+ TYNTLI YC+ G+L A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
++ M R V PD++T+ L++GLC G++ A F M IV+YN +I
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV 411
CK K++++ L + G+ PD T I++ G K G A L+ ++ G+
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 160/336 (47%), Gaps = 9/336 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++ L N + + A+++L E+ + K V + L++
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEK--KGLGADVVTYNTLLT-------GLCY 223
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G ++ + R + P +V+ L++ +K +D+ ++Y+EM + + PN T
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N + + C +G + + + +G P++VTYNTLIS +CK +++ L++ M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
D+ TY TL++G C+ GK+R A +F MV R ++PDI+++ L+ C G+++
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ +M + Y I++ G K ++ A L L GV Y +I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
+ LC++ A L+ R+ ++G + + ++ +E
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLE 499
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 143/310 (46%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
R DAF L+ M LP +V +T L+ + +M G+S D+ S+
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI +C+ ++ + S+L +MM G P T ++ G+ R+ A +LV+ + +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
G + +Y+ LI LC++ A LL + + G + YN L+ LC +DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ +M+ R+I P + T+ ALI F G EA L EM++S + P++ +ING
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
CM + A+ A K + +YN + + F + + + M+L +R GF +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 590 NLTCKYMIHS 599
T +IH
Sbjct: 351 IFTYNTLIHG 360
>gi|18420848|ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g24830
gi|22655280|gb|AAM98230.1| putative protein [Arabidopsis thaliana]
gi|30725398|gb|AAP37721.1| At5g24830 [Arabidopsis thaliana]
gi|332005984|gb|AED93367.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 593
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 181/369 (49%), Gaps = 10/369 (2%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I ++ R+ ++G P+ VS N L+ GL +N +D+ ++ M + GI PN
Sbjct: 168 KAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDP-------DLVTYNTLISSYCKKGRLNDA 294
T NI+ H C+ G + N +K+ EE D D+V L+ S K G + A
Sbjct: 228 TCNIIVHALCQKGVIGNNN---KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQA 284
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
+++ M ++NV D V Y ++ GLC G + A+ MV RG++PD+ +YNTLI A
Sbjct: 285 LEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISA 344
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CKEGK E+ L M G+ PD + ++I+QG G + A ++ + + +
Sbjct: 345 LCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE 404
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+++ +I + +A S+L + G P++ N L+ K + DA +K+
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKN 464
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEK 534
EM I P +TY L+ C +G A L DEML G PD L+ G C +
Sbjct: 465 EMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Query: 535 DVNKAEALL 543
+ KAE+LL
Sbjct: 525 RLKKAESLL 533
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 170/368 (46%), Gaps = 9/368 (2%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKI-EEEGFDPD--LVTYNTLISSYCKKGRLNDAFYLYR 299
FN+L ++ +D++ E + + + FD D L +++++ C +G+L+ A +L +
Sbjct: 88 FNVLDYIL--KSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRK 145
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M V+P L+T+ L+NGLCK G + +A L M G SP+ VSYNTLI C
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVN 205
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA----LNLVVELQRFGVSISR 415
+ ++ L M GI P+ TC IIV ++G + + L +++ + +
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
I L+ + ++ A + + + Q +YN ++ LC ++ A +
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
MV R + P + TY LI C G+ EA L M G+ PD +V+I G C+ D
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
VN+A L K + + +N V + + GD S + + L G PN T
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 596 MIHSLWKG 603
+IH KG
Sbjct: 446 LIHGYVKG 453
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 130/285 (45%), Gaps = 39/285 (13%)
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
IV C L++ K + Q +V++EM + + ++ +N++ C +G++ GF+
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+ + G +PD+ TYNTLIS+ CK+G+ ++A L+ M V PD ++Y ++ GLC G
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 325 KVREAHQ-----------------------------------LFHRMVHRGLSPDIVSYN 349
V A++ + + M+ G+ P++ + N
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI Y K G++ ++ + EM I+PDT T +++ G L A L E+ R
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRR 504
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG----YVPSL 450
G Y L+ LC R A SLL RI G +VP L
Sbjct: 505 GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFL 549
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 2/225 (0%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L++ L K D+ ++ M G+ P+ ++ ++ C +GDV++
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
N FL + + P+++ +N +I Y + G + A + +M V P++ T L++G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
K G++ +A + + M + PD +YN L+ A C G ++ + L EM+ G PD
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
T +V+G +GRL A +L+ +Q G++I D +LI+A
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITI--DHVPFLILA 552
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P ++ N +++G + V M G+ PN +T N L H + K G +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
++ PD TYN L+ + C G L AF LY M RR PD++TYT L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+G++++A L R+ G++ D V + L Y + + E+
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G + L G +P++ + N L++G +K + W V EM I P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T T+N+L C G + +++ G PD++TY L+ C KGRL A L
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV---HRGLS-PDIVSY 348
+ + D V + L + + EA+ ++ + + +RG+S P I+++
Sbjct: 534 SRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGVSCPSILNH 587
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 212/452 (46%), Gaps = 12/452 (2%)
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL---DVGFQPSIVSCNFLLNG 214
C +V F +++ V+ GL + + + + + P+ ++ N ++
Sbjct: 127 QCKQTVKSFNSVLN-------VIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKA 179
Query: 215 LLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+ +L +D+ +V+ E+ P+ +T++ L H CK +D+ L++++ EG P+
Sbjct: 180 MCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPN 239
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
LV +N LIS+ CKKG L A L M+ + +P+ VTY L++GLC +GK+ +A L +
Sbjct: 240 LVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLN 299
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+MV P+ V++ TLI + +G+ + +L + G + + ++ G KEG
Sbjct: 300 QMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEG 359
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+ A+ L E+ G + +Y LI LC++ + A L + GY+P+ Y+
Sbjct: 360 KFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYS 419
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
LM + A+L+ EM + N + Y LI C G+ EA+ + +ML
Sbjct: 420 SLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSR 479
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY--DTESYNAVFNMFAEDGDLS 572
G+ D +I+G+C V + L + + D +YN + N F +
Sbjct: 480 GIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIF 539
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
+ +++ L G P+ +TC + +L + M
Sbjct: 540 RAIDILNIMLDQGCDPDFITCDIFLKTLRENM 571
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 177/370 (47%), Gaps = 32/370 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y +VH L K A+ +L ++V K P+ V F LI+ +V
Sbjct: 273 PNEVTYNALVHGLCLKGKLEKAVSLLNQMVS-NKCVPNDV-TFGTLIN-------GFVMQ 323
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + G + + + L++GL K +Q ++++EM G PNT +
Sbjct: 324 GRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVY 383
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ L C+ G +D+ GFL +++ +G+ P+ TY++L+ Y + G + A +++ M
Sbjct: 384 SALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMAN 443
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
N + + V Y+ L+NGLCK+GK EA ++ +M+ RG+ D+V+Y+++I +C +++
Sbjct: 444 NNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQ 503
Query: 364 SKSLLYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS---ISRDIY 418
L +M+ G + PD T I++ + + + A++++ + G I+ DI+
Sbjct: 504 GLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIF 563
Query: 419 ------------------DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
D L+V L + R A+ ++E + +P + +++ +
Sbjct: 564 LKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQV 623
Query: 461 CKCDSVADAL 470
CK +V A+
Sbjct: 624 CKPKNVRKAI 633
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 191/404 (47%), Gaps = 3/404 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ R G + +V+ L+ GL + +D ++ +EM G+ PN ++ L
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+C++G V E + G PD++ + LI CK+G+ A + +M +R +
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VTY L+N LCKEG VREA L M +G++PD+V+YNTLI +M E+ S
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320
Query: 368 LYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L EM+ + PD T ++ G K GR+ A+ + + G + Y+YLI
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
+ ++ A +L++ + G P Y+ L+ K V A M R IK L
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
Y L+ C G A+ L +EM ++ L D+ +I+G C D+ + L+
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQD 499
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+ D +Y+ + NM+A+ GDL + + K+ GF P+
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPD 543
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 193/388 (49%), Gaps = 3/388 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y + G ++ K F G +P ++ L++ L K + +V + M + G+ P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+N+L + CK G V + ++++++G PD+VTYNTLI+ +++A
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321
Query: 299 RIMYRRN--VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
M + + V PD+VT+ ++++GLCK G++ +A ++ M RG ++V+YN LI +
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ K++ + +L+ E+ +G+ PD+FT I++ G+ K + A + +++ G+
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELF 441
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y L+ A+CQ A L + ++ + ++ Y+ ++ CK + L +M
Sbjct: 442 HYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIA-YSTMIHGACKSGDMKTVKQLIQDM 500
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+D + P TY LI + +G EA ++ +M SG +PD + LI GY E
Sbjct: 501 LDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQT 560
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNM 564
+K L+ K +D + + + +
Sbjct: 561 DKVLKLIHEMRAKNVAFDPKIISTIIRL 588
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 164/336 (48%), Gaps = 7/336 (2%)
Query: 274 DLVTYNTLISSYCKKG--RLNDAFYLYRIMYRRN---VLPDLVTYTTLMNGLCKEGKVRE 328
D V+YNT++++ C++G L A L M R P+ V+YTT+M GLC + E
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L M G+ D+V+Y TLI C ++ + LL EM G+G+ P+ +++
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
GY + GR + ++ R G+ ++ LI LC++ + A + + + Q G P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
++ YN L+ SLCK SV +AL L+ EM D+ + P + TY LI G+ EA+S +
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321
Query: 509 DEMLESGML--PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
+EM++ + PD +I+G C + +A + A++ + + +YN + F
Sbjct: 322 EEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFL 381
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ M L G P++ T +I+ K
Sbjct: 382 RVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSK 417
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 156/321 (48%), Gaps = 8/321 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ SV +D + P Y ++ L+ + AM L E+++
Sbjct: 274 CKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEP 333
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
V F +I K+G + ++ K + G ++V+ N+L+ G L+++ +
Sbjct: 334 DVVTFNSVI-------HGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKV 386
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ +E+ G+ P++ T++IL + F K +VD+ FL + + G +L Y L
Sbjct: 387 KMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPL 446
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+++ C++G + A L+ M +N D + Y+T+++G CK G ++ QL M+ GL
Sbjct: 447 LAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGL 505
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+PD V+Y+ LI Y K G ++E++ +L +M +G PD +++GY EG+ L
Sbjct: 506 APDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLK 565
Query: 402 LVVELQRFGVSISRDIYDYLI 422
L+ E++ V+ I +I
Sbjct: 566 LIHEMRAKNVAFDPKIISTII 586
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 178/344 (51%)
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYC 286
++E M +G P+ T+N L CK G + + +++ +G +P+++TY LI +C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 287 KKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIV 346
K+GRL +A + M + + + V Y L++ LCK+ KV++A +F M +G PDI
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
++N+LIF CK K +E+ L +M+ G+ +T T ++ + + G + AL LV ++
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G + Y+ LI ALC+ +L E + G P+ N L+ LC+ ++
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
AL +M+ R + P + TY +LI C GR+ EA++L D++ G+ PD+ L
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTL 300
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
I+ +C E + A LL I + ++ + + F ++GD
Sbjct: 301 ISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 166/339 (48%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
L VG P I + N L+ GL K + ++ EM G PN T+ IL FCK G +
Sbjct: 6 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 65
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
++ L+++ +G + V YN LIS+ CK ++ DA ++ M + PD+ T+ +L
Sbjct: 66 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ GLCK K EA L+ M+ G+ + ++YNTLI A+ + G MQE+ L+ +M+ G
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
D T +++ + G + L L ++ G++ + + LI LC+ A
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L + G P + YN L+ LCK +AL L D++ I P TY LI C
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 305
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
G +A L+ ++SG +P+ +L++ + E D
Sbjct: 306 KEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 344
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 151/301 (50%), Gaps = 2/301 (0%)
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ TY TL+ GLCK+G + A +L + M +G P++++Y LI +CKEG+++E++++
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L EM G G+ + ++ K+ ++ ALN+ ++ G ++ LI LC+
Sbjct: 72 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 131
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
N+ A L + + +G + + YN L+ + + ++ +AL L ++M+ R T
Sbjct: 132 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 191
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G + ++L ++M+ G+ P++ C +LING C ++ A L
Sbjct: 192 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 251
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ D +YN++ N + G + + L + G P+ +T +I W E
Sbjct: 252 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS--WHCKEGM 309
Query: 608 F 608
F
Sbjct: 310 F 310
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 114/209 (54%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++++ F G +P I + N L+ GL K+N ++ +Y++M G+ NT T+N
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 159
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L H F + G + + + + G D +TYN LI + C+ G + L+ M +
Sbjct: 160 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 219
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P+ ++ L+NGLC+ G ++ A + M+HRGL+PDIV+YN+LI CK G+ QE+
Sbjct: 220 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 279
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+L ++ GI PD T ++ + KEG
Sbjct: 280 NLFDKLQVEGICPDAITYNTLISWHCKEG 308
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 7/294 (2%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
+K C +V + LI + K G + E+ + G + V N L++ L
Sbjct: 42 IKGCEPNVITYTILID-------RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISAL 94
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
K + ++ +M G P+ TFN L CK ++ G + + EG +
Sbjct: 95 CKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANT 154
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
+TYNTLI ++ ++G + +A L M R D +TY L+ LC+ G + + LF
Sbjct: 155 ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFED 214
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M+ +GL+P+ +S N LI C+ G +Q + L +M+ G+ PD T ++ G K GR
Sbjct: 215 MMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGR 274
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
ALNL +LQ G+ Y+ LI C++ A LL R G++P+
Sbjct: 275 AQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 328
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%)
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
+ M+ G PDI +YNTLI CK+G + ++ L+ EM G P+ T I++ +
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
KEGRL A N++ E+ G++++ Y+ LI ALC+D + A ++ + G P +
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+N L+ LCK + +AL L +M+ + + TY LI F G EA+ L+++M
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
L G D LI C ++ K AL K + S N + N G++
Sbjct: 181 LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNI 240
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+E + + G P+ +T +I+ L K
Sbjct: 241 QHALEFLRDMIHRGLTPDIVTYNSLINGLCK 271
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 98/184 (53%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+++ G ++E+ K L G ++ N L+ L + I++ ++E+M G+ P
Sbjct: 163 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 222
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N + NIL + C+ G++ FL + G PD+VTYN+LI+ CK GR +A L+
Sbjct: 223 NNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLF 282
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ + PD +TY TL++ CKEG +AH L R V G P+ V++ L+ + KE
Sbjct: 283 DKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 342
Query: 359 GKMQ 362
G +
Sbjct: 343 GDQE 346
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 222/501 (44%), Gaps = 10/501 (1%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHS 162
Q+ A+ FF W + Y ++ +LA N + + E+ +
Sbjct: 121 QTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEM--GLIMT 178
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
V LI ++ +G++ E +R+ + G +PS+ S NFL+NGL+ I+
Sbjct: 179 VYSSNSLIK-------SFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIE 231
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+V+E M I P+ T+N + +C+ G K L+ +E PD +TY TLI
Sbjct: 232 SAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLI 291
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +G + LY M + + Y+ ++ GLCK+GK E + +F M+ +G
Sbjct: 292 QACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCK 351
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
++ Y LI + K G M E+ L M G+ PD T +IV K GRL AL
Sbjct: 352 ANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEY 411
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ GV+++ Y LI L + R A + + + G P YN L+++L K
Sbjct: 412 MEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAK 471
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
C + +AL L M ++ TY LI R+ EA++L D M++ G+ P +
Sbjct: 472 CGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAA 531
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
R L G C+ V +A +L A I +T +++ + N+ + G + + +L +
Sbjct: 532 FRALSTGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIV 590
Query: 583 RLGFAPNNLTCKYMIHSLWKG 603
G +I++L K
Sbjct: 591 DRGREIPGRVRTVLINALRKA 611
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 194/441 (43%), Gaps = 52/441 (11%)
Query: 115 WVKNDLE---IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS 171
WV ++ I+P+ +Y +V+ L N+KF + + + E++E K P V + +I
Sbjct: 200 WVWRRMKENGIEPSLFSYNFLVNGLV-NSKFIESAERVFEVMENGKIGPDVV-TYNTMIK 257
Query: 172 CTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM 231
Y +VG R++F+ + P ++ L+ D C +Y EM
Sbjct: 258 -------GYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEM 310
Query: 232 GRIGICPNTHTFNILTHVFCKNGDVDKVNGF----------------------------- 262
G+ H ++++ CK+G +V G+
Sbjct: 311 DEKGLEIPPHVYSLVIGGLCKDGK--RVEGYTVFENMISKGCKANVAIYTALIDSNAKCG 368
Query: 263 --------LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+++++EG +PD VTY +++S CK GRL++A + V + + Y+
Sbjct: 369 NMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYS 428
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+L++GL K G+V EA ++F+ MV +G PD YN LI A K GK+ E+ +L M +
Sbjct: 429 SLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVD 488
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G +T I++ G +E R AL L + G++ + + L LC + A
Sbjct: 489 GCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARA 548
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+L+ + G +P +++++ LCK + +A L D +VDR + LI
Sbjct: 549 CKILDEMAPMGVIPETA-FDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINA 607
Query: 495 FCGIGRSGEAVSLMDEMLESG 515
G + A+ LM + G
Sbjct: 608 LRKAGNADLALKLMRSKIGIG 628
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 235/529 (44%), Gaps = 28/529 (5%)
Query: 97 RVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELV 156
RVL + A FFNW++ ++K + + ++ ILA N+ S A + ++L
Sbjct: 90 RVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDL- 148
Query: 157 KDCPHSVDVFQDLISCTED----------CNWAYVKVGLIRESFKTFRKTLDVGFQPSIV 206
H +D LI + D W Y K + + +F K + GF PS+
Sbjct: 149 --GMHEIDDL--LIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVR 204
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
+CN +L L +++ VYE M GI P TFN + K GD+++V+ ++
Sbjct: 205 NCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM 264
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+ + VTYN LI+ + K G++ +A + M R ++ L+ G CK+G
Sbjct: 265 KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLF 324
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
+A + M++ G+ P +YN I A C G++ +++ LL M PD + +
Sbjct: 325 DDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTL 380
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K G+ + A L +L+ + S Y+ LI LC+ A L E +
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + Y L++ K +++ A + DEM+ + IKP Y +G S +A
Sbjct: 441 FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFR 500
Query: 507 LMDEMLESG-MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY---DTESYNAVF 562
L +EM+ + PD I V I+G C ++ KA + F K F++ D +Y V
Sbjct: 501 LHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA---IEFQRKIFRVGLVPDHVTYTTVI 557
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG--MERKFQ 609
+ E+G L LR P+ +T +I+ K +E+ FQ
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 154/314 (49%), Gaps = 1/314 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K+G E+ F PSIV+ N L++GL + ++ ++ EEM I P
Sbjct: 383 GYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP 442
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ L F KNG++ +++ +G PD Y T + G + AF L+
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 299 RIMYRRNV-LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + PDL Y ++GLCK G + +A + ++ GL PD V+Y T+I Y +
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G+ + +++L EM+ +YP T +++ G+ K GRL A E+++ GV +
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ L+ +C+ A L ++ ++G P+ Y L+ C + + + L EM+
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Query: 478 DRNIKPSLSTYRAL 491
D+ I+P T+RAL
Sbjct: 683 DKEIEPDGYTHRAL 696
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 162/348 (46%), Gaps = 3/348 (0%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R+ L P +VS N L++G +K+ + +++++ I P+ T+N L C++
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G+++ E++ + PD++TY TL+ + K G L+ A +Y M R+ + PD Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGL-SPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
TT G + G +A +L MV +PD+ YN I CK G + ++ ++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ PD T +++GY + G+ A NL E+ R + S Y LI + R
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A + + G P++ +N L+ +CK ++ +A +M + I P+ +Y LI
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
C + E V L EML+ + PD R L +EKD E
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKH--LEKDHESRE 708
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 149 LCELVELVKDCPHSVDVFQ-----DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
LC++ LVK +F+ D ++ T Y++ G + + + + L P
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR-GYLENGQFKMARNLYDEMLRKRLYP 583
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
S+++ L+ G K ++Q +Q EM + G+ PN T N L + CK G++D+ +L
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
K+EEEG P+ +Y LIS C + + LY+ M + + PD T+ L L K+
Sbjct: 644 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Query: 324 GKVREAHQL 332
+ RE L
Sbjct: 704 HESREVEFL 712
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 93/186 (50%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG + ++ + RK VG P V+ ++ G L+ +Y+EM R + P+
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L + K G +++ + ++++ G P+++T+N L+ CK G +++A+ M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P+ +YT L++ C K E +L+ M+ + + PD ++ L K+ +
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706
Query: 362 QESKSL 367
+E + L
Sbjct: 707 REVEFL 712
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y ++ N +F A + E+ L K SV + LI + + K
Sbjct: 548 PDHVTYTTVIRGYLENGQFKMARNLYDEM--LRKRLYPSVITYFVLI-------YGHAKA 598
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++F+ + G +P++++ N LL G+ K ID+ ++ +M GI PN +++
Sbjct: 599 GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+L C ++V +++ ++ +PD T+ L K + +L R++
Sbjct: 659 TMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLL 716
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 196/445 (44%), Gaps = 5/445 (1%)
Query: 158 DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
D SVD + I CN V+VG K G P+IV N ++ G K
Sbjct: 198 DRGDSVDNYSTCILVKGMCNEGKVEVGR-----KLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
L I+ + V++E+ G P TF + + FCK GD + L +++E G +
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
N +I + + G D + + PD+ TY L+N LCKEGK A
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
+GL P+ +SY LI AYCK + + LL +M G PD T I++ G G +
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
A+N+ V+L GVS IY+ L+ LC+ R A L + +P +Y L+
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
+ + +A + V++ +K + + A+I FC G EA++ M+ M E ++
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD +I+GY ++D+ A + + K + +Y ++ N F GD E
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWK 602
K PN +T +I SL K
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 198/420 (47%), Gaps = 1/420 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY + G + ++ + + +++ P +++CN LL+ L+K + +VY+EM G
Sbjct: 143 AYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDS 202
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ IL C G V+ +E +G P++V YNT+I YCK G + +A+ +
Sbjct: 203 VDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLV 262
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ + + +P L T+ T++NG CKEG + +L + RGL + N +I A +
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYR 322
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + + ++ N PD T I++ KEG+ A+ + E + G+ +
Sbjct: 323 HGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI A C+ A+ LL ++ + G P + Y L+ L + DA+ +K +++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
DR + P + Y L+ C GR A L EML+ +LPD+ + LI+G+ D +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+A + +K D +NA+ F G L + + R P+ T +I
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 169/390 (43%), Gaps = 35/390 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL-------------------- 218
Y K+G I ++ F++ GF P++ + ++NG K
Sbjct: 249 GYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV 308
Query: 219 ------NCIDQCWQ------VYEEMGRI---GICPNTHTFNILTHVFCKNGDVDKVNGFL 263
N ID ++ E +G I P+ T+NIL + CK G + GFL
Sbjct: 309 SVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFL 368
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ ++G P+ ++Y LI +YCK + A L M R PD+VTY L++GL
Sbjct: 369 DEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVS 428
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G + +A + +++ RG+SPD YN L+ CK G+ +K L EM+ I PD +
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ + G A + GV + ++ +I C+ A + + R+ +
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+ VP Y+ +++ K +A A+ + M KP++ TY +LI FC G
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCME 533
A EM ++P+ LI E
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 169/395 (42%), Gaps = 24/395 (6%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P + +Y ++ + ++ A K+L ++ E + C + + LI V
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAE--RGCKPDIVTYGILIH-------GLVVS 428
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ K +D G P N L++GL K ++ EM I P+ + +
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVY 488
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L F ++GD D+ E+G D+V +N +I +C+ G L++A M
Sbjct: 489 ATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+++PD TY+T+++G K+ + A ++F M P++V+Y +LI +C +G +
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI-YDYLI 422
++ EM + P+ T +++ KE L EL + ++ ++ L+
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 423 VALCQ----------DNRPFAATSL----LERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
+ D +SL R+ DG+ YN + LC V
Sbjct: 669 QGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKT 728
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
A + +D+MV + P ++ A++ FC +G S +
Sbjct: 729 ACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 10/273 (3%)
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL-YEMMGNGIYPDTFTCQIIVQGYGKE 393
++ H LS ++ AY + G + ++ + Y + PD C ++ K
Sbjct: 131 KLTHEALS-------HVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKS 183
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
RL A + E+ G S+ L+ +C + + L+E G +P++ Y
Sbjct: 184 RRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFY 243
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ CK + +A L+ E+ + P+L T+ +I FC G + L+ E+ E
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 514 SGMLPDSQICRVLING-YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ +I+ Y V+ AE++ A + D +YN + N ++G
Sbjct: 304 RGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP-DVATYNILINRLCKEGKKE 362
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ + G PNNL+ +I + K E
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 95/245 (38%), Gaps = 50/245 (20%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G++ E+ + + P + + +++G +K + +++ M + P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR-LNDAFYL 297
N T+ L + FC GD ++++ P++VTY TLI S K+ L A Y
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 298 YRIMYRRNVLPDLVTYTTLMNG-------------------------------------- 319
+ +M +P+ VT+ L+ G
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 320 -----------LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
LC G V+ A +MV +G SPD VS+ ++ +C G ++ +++
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD 768
Query: 369 YEMMG 373
+ +G
Sbjct: 769 FCNLG 773
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 207/407 (50%), Gaps = 6/407 (1%)
Query: 203 PSIVSCNF--LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
P++ + F +L L+K + ++M GI PN TFNIL + FC+ G +
Sbjct: 64 PTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAF 123
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L KI + G++PD++T NT I +C KG+++ A + + D V+Y TL+NGL
Sbjct: 124 SVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGL 183
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK G+ R A QL R+ + + + V YNT+I K+ + ++ L EM+ I PD
Sbjct: 184 CKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDV 243
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLL 438
T +++G+ G+L A++L ++ +I D+Y + L+ C++ R A ++L
Sbjct: 244 VTYSALIRGFFIVGKLKDAIDLFNKM--ILENIKPDVYTFNILVDGFCKEGRLKKAKNVL 301
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
+ + P++ +N L++ CK + + + M+ + IKP++ TY +L+ +C +
Sbjct: 302 DMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 361
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+ +A + + M + G+ + ++ING+C K V+KA L K I D +Y
Sbjct: 362 KQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTY 421
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
N++ + + G +S +L G PN +T ++++L ++
Sbjct: 422 NSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLK 468
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 181/364 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P+ V+ N L+N +L I + V ++ ++G P+ T N FC G + +
Sbjct: 98 GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA 157
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
F +K+ GF D V+Y TLI+ CK G A L R + + V + V Y T+++G
Sbjct: 158 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG 217
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+ K+ V +A L+ MV + +SPD+V+Y+ LI + GK++++ L +M+ I PD
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T I+V G+ KEGRL A N++ + + + ++ L+ C+D + ++
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P++ Y LM+ C V A + + M R + ++ +Y +I FC I
Sbjct: 338 MMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIK 397
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ +A+ L EM ++PD LI+G C ++ A L+ + Q + +YN
Sbjct: 398 KVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN 457
Query: 560 AVFN 563
++ N
Sbjct: 458 SILN 461
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 178/354 (50%), Gaps = 7/354 (1%)
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F LI+C + ++GLI +F K L +G++P I++ N + G I Q
Sbjct: 106 FNILINC-------FCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQAL 158
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
++++ +G + ++ L + CK G+ L +++ + + V YNT+I
Sbjct: 159 NFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGM 218
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K +NDAF LY M + + PD+VTY+ L+ G GK+++A LF++M+ + PD+
Sbjct: 219 SKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDV 278
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++N L+ +CKEG+++++K++L MM I P+ T +V G+ K+ ++ +
Sbjct: 279 YTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAM 338
Query: 406 LQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
+ + G+ + Y L+ C + A + + Q G ++ YN ++ CK
Sbjct: 339 MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKK 398
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
V A+ L EM ++I P + TY +LI C G+ A L++EM + G P+
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPN 452
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 166/331 (50%), Gaps = 12/331 (3%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + + R+ Q + V N +++G+ K ++ + +Y EM I P+
Sbjct: 185 KVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVV 244
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F G + K+ E PD+ T+N L+ +CK+GRL A + +M
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+++ P++ T+ TL++G CK+ K++E +F M+ +G+ P++V+Y +L+ YC ++
Sbjct: 305 MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 364
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++K + M G+ + + I++ G+ K ++ A+ L +E+ + Y+ L
Sbjct: 365 NKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 424
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I LC+ + A L+ + G P++ YN S+ +ALL K + D+ I
Sbjct: 425 IDGLCKSGKISYAFQLVNEMHDRGQPPNIITYN----------SILNALLTK--LKDQGI 472
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+P++ T LI C G+ A + +++L
Sbjct: 473 QPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 153/318 (48%), Gaps = 5/318 (1%)
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
IS+ ++ A L+ + +N + ++ L K L +M G+
Sbjct: 40 ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
+P+ V++N LI +C+ G + + S+L +++ G PD T ++G+ +G++ ALN
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE--IYNELMES 459
+L G + + Y LI LC+ AA LL R+ DG + L +YN +++
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRV--DGKLVQLNAVMYNTVIDG 217
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ K V DA L EMV + I P + TY ALI F +G+ +A+ L ++M+ + PD
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+L++G+C E + KA+ +L + + ++N + + F +D + + +
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337
Query: 580 RFLRLGFAPNNLT-CKYM 596
++ G PN +T C M
Sbjct: 338 MMMKQGIKPNVVTYCSLM 355
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 118/221 (53%), Gaps = 12/221 (5%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G ++++ + +P++ + N L++G K + + V+ M + GI P
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L +C V+K + + G ++ +YN +I+ +CK +++ A L+
Sbjct: 347 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLF 406
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ ++++PD+VTY +L++GLCK GK+ A QL + M RG P+I++YN+++
Sbjct: 407 IEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL------ 460
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
+LL ++ GI P+ T I+++G + G+L +A
Sbjct: 461 ------NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAA 495
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 195/420 (46%), Gaps = 46/420 (10%)
Query: 102 CQSDSV-SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C+SD V AL F +K + ++P NY ++ L + K FA+++ EL E
Sbjct: 644 CKSDDVDQALDVFGRMKEE-GMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE------ 696
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
P N ++NGL+K N
Sbjct: 697 --------------------------------------SSLVPDTFVYNIMVNGLVKSNR 718
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D+ ++ + M I P+ T+ L K+G +++ K+ EEG +PD+V Y +
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ K G+L+ A ++R M ++ +PD+VTY++L++ L KEG+V EA+ F + +G
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+P++ Y++LI ++ K+G + + L EM P+ T ++ G K GRL A
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L+ E+++ G Y+ LI + + A S +R+ + G VP + + L+ESL
Sbjct: 899 KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
K D + +A L D M + PS+ TY LI G+ EA + EM G +PD
Sbjct: 959 GKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDG 1018
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 241/527 (45%), Gaps = 41/527 (7%)
Query: 108 SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQ 167
SA+ F + I+P + + + VH + + A + + E+++ D V F
Sbjct: 270 SAVIVFGKL-GQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGID--PGVHTFT 326
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI A VK G I E+ K F ++ P++V+ L+NGL K +++ +V
Sbjct: 327 VLID-------ALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEV 379
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ EM P+ +N L K G+ D G +++++ G P+L TYN +IS K
Sbjct: 380 FVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGK 439
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG----LSP 343
GR +A+ L+ + + +PD+ TY TL++ L K G++ + + MV +G +S
Sbjct: 440 AGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISR 499
Query: 344 DI---------------------------VSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
D ++YNTL+ A+ G + E+ LL M +
Sbjct: 500 DSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHEC 559
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P T +V G GK GRL A++L+ E+++ G S Y L+ + + ++ + S
Sbjct: 560 IPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLS 619
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L + + + G V + Y+ ++ LCK D V AL + M + ++P L Y+ L+
Sbjct: 620 LFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV 679
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
+ A+ + +E+ ES ++PD+ + +++NG V++A L+ + + D
Sbjct: 680 KDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+Y ++ + + G L + + + G P+ + ++ L KG
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKG 786
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 205/421 (48%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + E+ R+ G +PS+V+ + L+ K + ++ +++EM R G +
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVS 634
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++++ + CK+ DVD+ +++EEG +P L Y TL+SS K +++ A ++ +
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+++PD Y ++NGL K +V EA +L M ++ + PD+ +Y +L+ K G++
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ ++ +M G PD ++ GK G+L AL + + + Y L
Sbjct: 755 EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I +L ++ R A E G P++ +Y+ L++S K V AL L +EM R
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY L+ GR A L++EM + G +PD +LI+G V++AE+
Sbjct: 875 PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+K + D ++ ++ + L + EL G+ P+ +T +I L
Sbjct: 935 YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILG 994
Query: 602 K 602
+
Sbjct: 995 R 995
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 224/532 (42%), Gaps = 42/532 (7%)
Query: 103 QSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCEL-VELVKDCPH 161
Q D A FF W T Y L++ LA + +++L + E + H
Sbjct: 159 QKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMH 218
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ T + + A + F + G PS NF+L L+K
Sbjct: 219 LLTSLLRTFGSTNNVSGA----------LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFY 268
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
V+ ++G+ I P+ TF I H F ++G +D ++++ + G DP + T+ L
Sbjct: 269 HSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVL 328
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I + K G +++A + M P++VTYTTL+NGL K G++ EA ++F M
Sbjct: 329 IDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNC 388
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
SPD ++YNTLI K G+ + L EM G+ P+ T I++ GK GR A
Sbjct: 389 SPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQ 448
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI---------------GQDGY 446
L +L+ G Y+ LI L + + ++++ + G +G
Sbjct: 449 LFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGT 508
Query: 447 V---------PSL------EI-YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
+ PSL EI YN LM + V +A+ L + M P++ TY
Sbjct: 509 IEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTT 568
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ GR EAVSL+ EM + G P L+ + ++ +L +K
Sbjct: 569 LVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG 628
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +Y+ V N + D+ + +++ R G P K ++ SL K
Sbjct: 629 CVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 242/520 (46%), Gaps = 16/520 (3%)
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
+ L+P+L + I +L A F+ +K + P Y ++ +L +
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV-PDVFTYNTLIDVLGKGGQMD 479
Query: 144 FAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQP 203
+ ++ E+VE +C +IS D N + G I + +T +GF+
Sbjct: 480 KVLAIIKEMVEKGGEC---------IIS--RDSNAGHE--GTIEGADRTVEYP-SLGFKS 525
Query: 204 -SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
++ N L++ + +D+ ++ E M + P T+ L K G +D+
Sbjct: 526 LGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSL 585
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L ++E++G +P +VTY++L++S+ K+ + ++ L+ M R+ + D+ TY+ ++N LCK
Sbjct: 586 LREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCK 645
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
V +A +F RM G+ P + +Y TL+ + K+ K+ + + E+ + + PDTF
Sbjct: 646 SDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFV 705
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+V G K R+ A LV ++ + Y L+ L + R A ++ ++
Sbjct: 706 YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
++G+ P + Y LM+ L K ++ AL++ M + P + TY +LI GR
Sbjct: 766 EEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVE 825
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + G P+ + LI+ + + V++A L ++ + +YN +
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ A+ G L+ +L + ++G P+ +T +I + K
Sbjct: 886 SGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 133/264 (50%), Gaps = 9/264 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++ +L K S A+ + + + K C V + LI + K
Sbjct: 770 EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK--KRCVPDVVTYSSLID-------SLGK 820
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + E++ F ++ G P++ + L++ K +D+ +++EEM R PN T
Sbjct: 821 EGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVT 880
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L K G ++ LE++E+ G PDLVTYN LI K G +++A ++ M
Sbjct: 881 YNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMK 940
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ ++PD++T+T+L+ L K K+ EA +LF M G +P +V+YN LI + GK+
Sbjct: 941 EKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVH 1000
Query: 363 ESKSLLYEMMGNGIYPDTFTCQII 386
E+ + +EM G PD T I+
Sbjct: 1001 EAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/338 (19%), Positives = 127/338 (37%), Gaps = 37/338 (10%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+++G+ + TY +I + + M++ + T+L+ V
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQI 385
A ++F++M G +P YN + +G S +++ +G I PD T +I
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYN-FVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRI 292
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
V + + GRL A + E+ + G+
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGID--------------------------------- 319
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P + + L+++L K ++ +A + M + P++ TY L+ GR EA
Sbjct: 320 --PGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEAC 377
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ EM E+ PD+ LI+G + + A L + + + +YN + ++
Sbjct: 378 EVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVL 437
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ G + +L G P+ T +I L KG
Sbjct: 438 GKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 199/415 (47%), Gaps = 1/415 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A K G + F+ + G QP++V+ N L++ L K +++ +++ M + G+ P
Sbjct: 230 ALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTP 289
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TF IL + + +V L+++E+ G P+ V YN LI +C+KG + A L+
Sbjct: 290 SVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLF 349
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + P VTY + LCKEG++ A ++ M+ G++ +NT++ +
Sbjct: 350 DEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR 409
Query: 359 GKMQES-KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ ES S+ EM+ G+ P+ ++ K G+ A+ + + G+ ++
Sbjct: 410 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLAT 469
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ LI LC+ AT +++ + G YN ++ CK + +A+ L +M
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 529
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R KP L T+ L+ +C +G+ E L+D+M G+ PD +I+G+C KD+
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
KA+ L + + YNA+ + +GD+S ++ + G P N+T
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVT 644
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 2/400 (0%)
Query: 192 TFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI-GICPNTHTFNILTHVF 250
FR G PSI +CN L L++ +D +V++EM + N +++ +
Sbjct: 172 AFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKAL 231
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDL 310
CK G VD L ++ G P +VTYN L+ + CK GR+ +AF L M + + P +
Sbjct: 232 CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 291
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
VT+ L+NGL + + E + M G+SP+ V YN LI +C++G ++ L E
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE 351
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+ + P T +I + KEG + A ++ ++ G+++ +++ ++ L Q R
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTR 411
Query: 431 PF-AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
+ S+ + G P+ + M LCK +A+ + + +++ + +L+T
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN 471
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
ALI C EA ++ ML G+ DS ++I G C + + +A L G ++
Sbjct: 472 ALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR 531
Query: 550 FQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
D ++N + + + G + + L + G P+
Sbjct: 532 GFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPD 571
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 211/501 (42%), Gaps = 49/501 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P+ + ++++ LA +F +L E+ E + P+ V ++ +LI W +
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEM-EQLGVSPNEV-IYNELI------GW-HC 337
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G ++ + F + + +P+ V+ N + L K +++ ++ E+M IG+ +
Sbjct: 338 RKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCG 397
Query: 242 TFNILT------------------------------------HVFCKNGDVDKVNGFLEK 265
FN + CK G + G K
Sbjct: 398 LFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFK 457
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+G +L T N LI C+ + +A + + M + + D +TY ++ G CK+ K
Sbjct: 458 TLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSK 517
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
+ EA +L M RG PD+ ++NTL+ AYC GKM+E+ LL +M G+ PD +
Sbjct: 518 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGT 577
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
I+ G+ K + A + EL G+ + IY+ LI ++ A +E + +G
Sbjct: 578 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 637
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P+ Y LM +C V +A + + + N+ + Y +I +C +G+ EAV
Sbjct: 638 IQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAV 697
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+ +EM G+ P+ L+ Y + +A L I D +Y +
Sbjct: 698 AYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARC 757
Query: 566 AE----DGDLSKLMELQKRFL 582
+E D D+ EL L
Sbjct: 758 SEVNSLDKDIGHTAELSSGAL 778
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 4/369 (1%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C K G +E+ + KTL+ G ++ + N L++GL + + + +V + M G
Sbjct: 438 CMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKG 497
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
I ++ T+NI+ CK+ +++ + GF PDL T+NTL+ +YC G++ + F
Sbjct: 498 IELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETF 557
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+L M + PD+V+Y T+++G CK +R+A + ++ RGL P++ YN LI Y
Sbjct: 558 HLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY 617
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
+ G + + + M NGI P T ++ G + A + + + V +
Sbjct: 618 GRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGV 677
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y +I C+ + A + E + G P+ Y LM + K + +A L DE
Sbjct: 678 IGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDE 737
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING----YC 531
MV + P TY LI + + + E+ + D ++ +L NG +C
Sbjct: 738 MVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGINAPWC 797
Query: 532 MEKDVNKAE 540
++ + E
Sbjct: 798 QKEAASSVE 806
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 164/317 (51%), Gaps = 7/317 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +VS + ++NG K +D+ M I PN T+N + CK VDK
Sbjct: 86 PDVVSYSTVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L + + G PD +TYN+++ +C G+ +A + M V PD+VTY +LM+ LCK
Sbjct: 139 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
G+ EA ++F M RGL PDI +Y TL+ Y +G + E LL M+ NGI+P+ +
Sbjct: 199 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+V Y K+ ++ A+ + ++++ G++ + Y +I LC+ R A E++
Sbjct: 259 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+G P +YN L+ SLC D A L EM+DR I S + ++I C GR
Sbjct: 319 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378
Query: 503 EAVSLMDEMLESGMLPD 519
E+ L D M+ G+ PD
Sbjct: 379 ESGKLFDLMVRIGVKPD 395
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 176/348 (50%), Gaps = 9/348 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--ICPNTHTFNILTHVFCKNGDVDKVN 260
P + S N LLNGL N + ++ M G P+ +++ + + F K GD+DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ ++ P++VTYN++I++ CK ++ A + M + V+PD +TY ++++G
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
C G+ +EA +M G+ PD+V+YN+L+ CK G+ E++ + M G+ PD
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++QGY +G L+ L+ + R G+ + ++ L+ A + + A + +
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ Q G P+ Y +++ LCK V DA+L ++M+D ++P Y +LI C +
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+A L EML+ G+ + +I+ +C E V ++ L +
Sbjct: 342 WEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVR 389
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 156/323 (48%), Gaps = 15/323 (4%)
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNT 350
DA +++ + RR + PD+ +Y L+NGLC E + +EA +L H M G PD+VSY+T
Sbjct: 35 DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I + KEG + +M+ I P+ T I+ K + A+ ++ + + G
Sbjct: 94 VINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
V Y+ ++ C +P A L+++ DG P + YN LM+ LCK +A
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
+ D M R +KP ++TY L+ + G E L+D M+ +G+ P+ + +L+ Y
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
++ V +A + ++ + +Y V ++ + G + M ++ + G P++
Sbjct: 267 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 326
Query: 591 LTCKYMIHSL-----WKGMERKF 608
+ +IHSL W+ E F
Sbjct: 327 IVYNSLIHSLCIFDKWEKAEELF 349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 113/276 (40%), Gaps = 50/276 (18%)
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG--IYPDTFTCQ 384
+A +F ++ RG+ PD+ SYN L+ C E + QE+ LL+ M +G PD +
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ KEG L L+ +RI
Sbjct: 93 TVINGFFKEGDLDKMLD-------------------------------------QRIS-- 113
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
P++ YN ++ +LCK +V A+ + MV + P TY +++ FC G+ EA
Sbjct: 114 ---PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEA 170
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ + +M G+ PD L++ C +A + K+ D +Y +
Sbjct: 171 IVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQG 230
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNN-----LTCKY 595
+A G L ++ L +R G PN+ L C Y
Sbjct: 231 YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266
>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1025
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 150/608 (24%), Positives = 245/608 (40%), Gaps = 143/608 (23%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW---------- 178
YC+ VHIL S AM +L L C +F L+ C+
Sbjct: 111 YCMAVHILVQAQMPSQAMSVLRHLALTGFSCSA---IFSSLLRTISRCDPTNLFSVDLLV 167
Query: 179 -AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE------- 230
AYVK G + ++ + GF+ S+ SCN +LN L+ +N + W +E
Sbjct: 168 NAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFP 227
Query: 231 -------------------------MGRIGIC--PNTHTFNILTHVFCKNGDVDKVNGFL 263
+ ++ C PN T+N + + + K G L
Sbjct: 228 LDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRIL 287
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ +E+ G + DL TYN +I CK R A+ L + M N+ PD +Y TL++G E
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE------------- 370
GK+ A +F++M+ + L P + +Y LI YC+ G+ E++ +LYE
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407
Query: 371 -------MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
M+ +GI PD T ++ EG + A + R +S ++ +I
Sbjct: 408 AKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSRMKISFDVASFNCIID 463
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIY------------------------------ 453
+ CQ A S+ + + + G+ P + Y
Sbjct: 464 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 523
Query: 454 -----NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
N L+ +CK ++ +AL L ++MV RNI P TY L+ FC G+ A+ L+
Sbjct: 524 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 583
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL-------GFFA-------------K 548
MLE G++PD+ L+NG E V A + G +A K
Sbjct: 584 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 643
Query: 549 KFQIYDTE----------------SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
QI + E SYN + + + + G LS+ + L + ++ G P+N+T
Sbjct: 644 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 703
Query: 593 CKYMIHSL 600
+ +I L
Sbjct: 704 YRLLIFGL 711
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 187/422 (44%), Gaps = 36/422 (8%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV---------- 256
+ N LL G+ K +D+ + E+M I P+T+T+ IL FCK G V
Sbjct: 527 TLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMM 586
Query: 257 -------DKV------NG-------------FLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
D + NG F E I +EG D + YN++++ Y K G+
Sbjct: 587 LEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQ 646
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+N+ L R M+ V P +Y LM+G K+G++ L+ MV G+ PD V+Y
Sbjct: 647 INEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRL 706
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LIF C+ G ++ + L +M+ G++PD I+++ + ++ ++ +AL L ++
Sbjct: 707 LIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLH 766
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+S S Y ++ L + N + +L + + G P Y L+ + C+ + A
Sbjct: 767 MSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAF 826
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
LK++M + PS +++ C G+ EA+ + ++ +GM+P L++G
Sbjct: 827 ELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGL 886
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C E ++ A L D +YN + + ++L + G PN
Sbjct: 887 CKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNI 946
Query: 591 LT 592
T
Sbjct: 947 TT 948
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 204/467 (43%), Gaps = 52/467 (11%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ ++ +V P S N L++G I+ ++ +M R + P+ T+ L
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376
Query: 248 HVFCKNGDVDKVNGFLEKIE--------------------EEGFDPDLVTY--------- 278
+C+NG D+ L +++ +G DPD++TY
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGMI 436
Query: 279 ----------------------NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
N +I SYC++G + +AF +Y M R PD+ TY +L
Sbjct: 437 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 496
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ GLC+ G + +A + ++ + + D + NTL+ CK G + E+ L +M+ I
Sbjct: 497 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 556
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PDT+T I++ G+ K G+++ AL L+ + G+ Y L+ L + + AA+
Sbjct: 557 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 616
Query: 437 LL-ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+ E I ++G YN +M K + + L M + + PS ++Y L+ +
Sbjct: 617 MFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGY 676
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
G+ + L +M++ G+ PD+ R+LI G C + A L + D
Sbjct: 677 IKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDN 736
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++ + F+E +S ++L L +P++ T M++ L +
Sbjct: 737 LAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIR 783
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 169/340 (49%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y+K G I E + R + PS S N L++G +K + + +Y +M + GI P
Sbjct: 640 GYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKP 699
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ +L C+ G ++ FLEK+ EG PD + ++ LI ++ +K ++++A L+
Sbjct: 700 DNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLF 759
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M ++ P TY ++NGL ++ +++++++ H MV GL P Y LI A C+
Sbjct: 760 SYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRV 819
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + L +M G+ P IV+G K G++ A+ + + R G+ + +
Sbjct: 820 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 879
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC++ + A L + + G + YN L+ LC + DAL L +EM
Sbjct: 880 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKS 939
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
+ + P+++TY L G + L+ ++ + G++P
Sbjct: 940 KGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 979
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 187/412 (45%), Gaps = 1/412 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-GRIGIC 237
+ K G + + + L+ G P ++ LLNGL+ + +++E+ + G+
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 628
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ +N + + + K G ++++ + + E P +YN L+ Y KKG+L+ YL
Sbjct: 629 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 688
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
YR M + + PD VTY L+ GLC+ G + A + +MV G+ PD ++++ LI A+ +
Sbjct: 689 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 748
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
+ KM + L M + P + T +V G ++ L + ++ ++ G+
Sbjct: 749 KSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTH 808
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y LI A C+ A L E + G VPS + ++ LCKC V +A+++ ++
Sbjct: 809 YIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM 868
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ P+++T+ L+ C + +A L M G+ D VLI G C +K +
Sbjct: 869 RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCIC 928
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
A L K + + +Y + G + +L K G P+
Sbjct: 929 DALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 980
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 222/508 (43%), Gaps = 36/508 (7%)
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D +AL FF WV + T++++ ++ +LA + P + D
Sbjct: 65 DPATALAFFEWVARRPGFRHTAASHAALLQLLA------------------RRRAPANYD 106
Query: 165 -VFQDLISCT---EDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVS--C-NFLLNGLLK 217
+ +ISC+ ED +RE+ + VG + ++S C N L LL+
Sbjct: 107 KLVLSMISCSGTAED----------VREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLR 156
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+ + ++Y + + G+ P+T T+N + +CK G + + + + E G D T
Sbjct: 157 FDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYT 216
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
N L+ YC+ L A +L +M + +YT L+ GL + VREA L MV
Sbjct: 217 CNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMV 276
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G S ++ Y LI CKEG++ +++ LL EM G+ P +T ++ GY K GR+
Sbjct: 277 QDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMK 336
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + +++ G + Y+ LI LC + A LL G+ P++ + L+
Sbjct: 337 DALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLI 395
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
CK + + DAL +K M+ N K L Y LI R EA ++EM +G+
Sbjct: 396 NGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLA 455
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
P+ I +I+GYC V A + + + +Y ++ +D L K M L
Sbjct: 456 PNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMAL 515
Query: 578 QKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ G P + +I K E
Sbjct: 516 ITKMQEDGITPGVIAYTTLIQGQCKKHE 543
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 198/426 (46%), Gaps = 65/426 (15%)
Query: 178 WAYVKV--GLIRE-----SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
W Y + GLI++ + K + G P +++ L+ G K + D ++++E
Sbjct: 494 WTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEM 553
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDK--------------------VNGF-------- 262
M + G+ P+ +N+LT CK+G ++ V+GF
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDF 613
Query: 263 ----LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+EK+ EG DL TY+ L+ + CK+ +LN+A + M V ++V YT +++
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIIS 673
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
+ KEGK A LF+ M+ G P +Y I +YCK G+++E++ L+ EM +G+ P
Sbjct: 674 EMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTP 733
Query: 379 DTFTCQIIVQGYGKEG---RLLSALNLVVELQRFGVSISRDIYDYLI-----VALCQDNR 430
D T I + G G G R S L +V+ S + + Y + + + N
Sbjct: 734 DVVTYHIFINGCGHMGYMDRAFSTLKRMVD-----ASCEPNCWTYWLLLKHFLKMSLINA 788
Query: 431 PFAATS-------------LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ TS LLER+ + G P++ Y+ ++ CK + +A +L D M+
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ I P+ Y LI C C I G+ VS + +M+E G P + LI G C E D +
Sbjct: 849 GKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908
Query: 538 KAEALL 543
+A++L
Sbjct: 909 RAKSLF 914
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 194/428 (45%), Gaps = 10/428 (2%)
Query: 171 SCTEDCNWAYVKV------GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
C D +W Y + G + E+ + + GF P++++ L+NG K ID
Sbjct: 349 GCNPD-DWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDA 407
Query: 225 WQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
+V M + + +L +V K + + L ++ G P++V Y ++I
Sbjct: 408 LRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDG 467
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPD 344
YCK G + A ++++M P+ TY +L+ GL ++ K+ +A L +M G++P
Sbjct: 468 YCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+++Y TLI CK+ + + L M NG+ PD ++ K GR A + +V
Sbjct: 528 VIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV 587
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
R GV +++ Y L+ + A L+E++ +G L Y+ L+++LCK
Sbjct: 588 ---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+ +AL + D+M +K ++ Y +I G+ A SL +EM+ SG P +
Sbjct: 645 KLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYT 704
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRL 584
V I+ YC + +AE L+G + D +Y+ N G + + KR +
Sbjct: 705 VFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDA 764
Query: 585 GFAPNNLT 592
PN T
Sbjct: 765 SCEPNCWT 772
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 244/554 (44%), Gaps = 28/554 (5%)
Query: 77 TLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALT--FFNWVKNDLEIKPTSSNYCLIVH 134
TL + K +LPHL H R+ L T FF + + T +YCL++
Sbjct: 67 TLDSSKCKSILPHLTPHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLR 126
Query: 135 ILAWNNKFSFAMKMLCELVE------LVKDCPHSVDVFQDLISCTEDCNWAY--VKVGLI 186
L ++ A +L L++ K D +++ S + N ++G +
Sbjct: 127 SLLADSFVPRARFLLARLIDGHVPTWSSKTTTSFHDRLREIASSMLELNQGSDEQRLGEL 186
Query: 187 ----------------RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
R +F F G P + +CN LL+ L+K N + + ++V++
Sbjct: 187 DLLLHILCSQFKCLGSRCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD- 245
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR 290
+ G+ P+ TF + FCK G V K+E G P++VTYN +I K GR
Sbjct: 246 LACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGR 305
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
+A M R V P +VTY L++GL K EA+++ M G +P+ V +N
Sbjct: 306 FEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNA 365
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
LI YC++G M E+ + EM G+ P+ T ++QG+ + ++ A ++V + G
Sbjct: 366 LIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
+S++ D+ Y+I L + + +A ++ ++ S + L+ LCKC+ ++A+
Sbjct: 426 LSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAI 485
Query: 471 LLKDEMVD-RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L ++ + + + T AL+ C G E ++ +MLE G+L D LI G
Sbjct: 486 ELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFG 545
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
C + +A L ++ DT +YN + A+ G + + L GF PN
Sbjct: 546 CCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPN 605
Query: 590 NLTCKYMIHSLWKG 603
T ++ K
Sbjct: 606 VYTYALLLEGYCKA 619
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 5/253 (1%)
Query: 176 CNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG 235
C W G I E+FK + + FQP + NFL+ GL + ID ++ E G
Sbjct: 547 CKW-----GKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYG 601
Query: 236 ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
PN +T+ +L +CK ++ F + ++ E + V YN LI++YC+ G + +AF
Sbjct: 602 FVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAF 661
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L M R +LP TY++L++G+C G+V EA ++F M + GL P++ Y LI +
Sbjct: 662 KLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGH 721
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
CK G+M S+L EM NGI P+ T I++ GY K G + A L+ E+ R G++
Sbjct: 722 CKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDT 781
Query: 416 DIYDYLIVALCQD 428
Y+ L C++
Sbjct: 782 VTYNALQKGYCKE 794
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 221/492 (44%), Gaps = 45/492 (9%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ P+ Y +++ L F A ++L E+ + P+ V VF LI Y
Sbjct: 320 KVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSM-GFAPNEV-VFNALID-------GY 370
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN- 239
+ G + E+ + + G +P+ V+ N LL G + N ++Q QV + G+ N
Sbjct: 371 CRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNM 430
Query: 240 ----------------THTFNILTHVFCKNGDVD------------KVNGFLEKIE---- 267
I+T + N V K G E IE
Sbjct: 431 DVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFK 490
Query: 268 ---EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+G + VT N L+ C++G + + F + + M + +L D ++Y TL+ G CK G
Sbjct: 491 LAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWG 550
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ EA +L MV + PD +YN L+ GK+ + LL+E G P+ +T
Sbjct: 551 KIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYA 610
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++++GY K R+ A+ L V +S +Y+ LI A C+ A L + +
Sbjct: 611 LLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSR 670
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G +P+ Y+ L+ +C V +A + +EM + + P++ Y ALI C +G+
Sbjct: 671 GILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIV 730
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
S++ EM +G+ P+ ++I+GYC ++ +A LL + DT +YNA+
Sbjct: 731 GSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKG 790
Query: 565 FAEDGDLSKLME 576
+ ++ +L+ ++
Sbjct: 791 YCKERELTVTLQ 802
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 209/482 (43%), Gaps = 71/482 (14%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ + + + PS+V+ L++GL+KL ++ +V EM +G PN
Sbjct: 302 KSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEV 361
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA------- 294
FN L +C+ GD+ + +++ +G P+ VT+NTL+ +C+ ++ A
Sbjct: 362 VFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYI 421
Query: 295 -------------FYLYRIMYRRNVLPDLVTYTTLMNG---------------LCKEGKV 326
+ ++R+M R + L T L++G LCK
Sbjct: 422 LSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGH 481
Query: 327 REAHQLFHRMVH-RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
EA +L+ ++ +GL+ + V+ N L+ C+ G M+E +L +M+ G+ D +
Sbjct: 482 SEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNT 541
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G K G++ A L E+ + Y++L+ L + LL + G
Sbjct: 542 LIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYG 601
Query: 446 YVPSLEIYNELMESLCKCDSVADAL----------------------------------- 470
+VP++ Y L+E CK D + DA+
Sbjct: 602 FVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAF 661
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L+D M R I P+ +TY +LI C IGR EA + +EM G+LP+ LI G+
Sbjct: 662 KLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGH 721
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
C ++ ++L + + +Y + + + + G++ + EL +R G AP+
Sbjct: 722 CKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDT 781
Query: 591 LT 592
+T
Sbjct: 782 VT 783
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 176/328 (53%), Gaps = 8/328 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-IDQCWQVYEEMGRIGIC 237
AY + G RE+ K F+ G +P++++ N +++ K + + ++EEM + G+
Sbjct: 243 AYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVE 302
Query: 238 PNTHTFNILTHVFCKNGDV--DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
P+ TFN L V C G + D F E ++ G + D+ TYNTLI + CK G++ A
Sbjct: 303 PDRITFNSLIAV-CSRGSLWEDSQRVFAE-MQRRGIEQDIFTYNTLIDAVCKGGQMELAA 360
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
+ M +N+ P++VTY+T+++G K G EA L+H M G+ PD VSYNTLI Y
Sbjct: 361 SIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIY 420
Query: 356 CKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISR 415
K G+ ++ + +M G+ D T ++ YGK+G+ A L +++ G+ +
Sbjct: 421 AKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNV 480
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
Y LI A + ATS+ + G P + +Y+ L++S CKC V DA++L E
Sbjct: 481 LTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQE 540
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGE 503
M I+P++ TY +LI + GR+G+
Sbjct: 541 MTQAGIQPNIVTYNSLIDAY---GRNGQ 565
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 190/367 (51%), Gaps = 7/367 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
++G + + F + GF ++ + + +++ + + +V++ M + G PN
Sbjct: 211 RLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLI 270
Query: 242 TFNILTHVFCKNG-DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRL-NDAFYLYR 299
T+N + K G D+ K E++++EG +PD +T+N+LI + C +G L D+ ++
Sbjct: 271 TYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFA 329
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M RR + D+ TY TL++ +CK G++ A + M + +SP++V+Y+T+I Y K G
Sbjct: 330 EMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLG 389
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+E+ L ++M +G+ PD + ++ Y K GR AL +++R G+ Y+
Sbjct: 390 CFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYN 449
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI A + + A L +++ +G VP++ Y+ L+++ K DA + E
Sbjct: 450 ALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRA 509
Query: 480 NIKPSLSTYRALI--CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+KP + Y +LI CC CG+ +AV L+ EM ++G+ P+ LI+ Y V+
Sbjct: 510 GLKPDVVLYSSLIDSCCKCGLVE--DAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVD 567
Query: 538 KAEALLG 544
EA G
Sbjct: 568 NVEAAKG 574
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 190/400 (47%), Gaps = 16/400 (4%)
Query: 208 CNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
+ +++ L +L ++ V+ + G N + ++ + + ++G + + ++
Sbjct: 202 ASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMK 261
Query: 268 EEGFDPDLVTYNTLISSYCKKGR--LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
+ G P+L+TYNT+I + C KG L A ++ M + V PD +T+ +L+ +C G
Sbjct: 262 KAGCKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGS 319
Query: 326 VRE-AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
+ E + ++F M RG+ DI +YNTLI A CK G+M+ + S++ M I P+ T
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYS 379
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI---VALCQDNRPFAATSLLERI 441
++ GYGK G A+ L +++ GV R Y+ LI L + + A +ER+
Sbjct: 380 TMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERV 439
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
G V + YN L+++ K DA L D+M + P++ TY ALI + G
Sbjct: 440 GLKADVVT---YNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMH 496
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A S+ E +G+ PD + LI+ C V A LL + + +YN++
Sbjct: 497 QDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSL 556
Query: 562 FNMFAEDGDLSKLMELQKR-----FLRLGFAPNNLTCKYM 596
+ + +G + + + F ++G + CK +
Sbjct: 557 IDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTL 596
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 7/270 (2%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K+G E+ + + G +P VS N L++ KL D ++M R+G+
Sbjct: 384 GYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKA 443
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L + K G G +K++ EG P+++TY+ LI +Y K G DA ++
Sbjct: 444 DVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIF 503
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
R + PD+V Y++L++ CK G V +A L M G+ P+IV+YN+LI AY +
Sbjct: 504 VEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRN 563
Query: 359 GKMQESKSLLYEMMGN-----GIYPDTFTCQIIV--QGYGKEGRLLSALNLVVELQRFGV 411
G++ ++ M N G C+ + Q +L+A+++ E+Q+FG+
Sbjct: 564 GQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGL 623
Query: 412 SISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ + ++ A + + A+ LLE++
Sbjct: 624 KPNVVTFSAILNACSRCSSLQEASVLLEQM 653
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 149/323 (46%), Gaps = 7/323 (2%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+IS+ + G++ A ++ + ++ Y+ +++ + G+ REA ++F M G
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG 264
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSL--LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
P++++YNT+I A C +G + K+L EM G+ PD T ++ +
Sbjct: 265 CKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWED 323
Query: 399 ALNLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
+ + E+QR G I +DI+ Y LI A+C+ + A S++ + P++ Y+ +
Sbjct: 324 SQRVFAEMQRRG--IEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTM 381
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ K +A+ L +M + ++P +Y LI + +GR +A++ +M G+
Sbjct: 382 IDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL 441
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
D LI+ Y + A L + + + +Y+A+ + +++ G
Sbjct: 442 KADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501
Query: 577 LQKRFLRLGFAPNNLTCKYMIHS 599
+ F R G P+ + +I S
Sbjct: 502 IFVEFKRAGLKPDVVLYSSLIDS 524
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 138/307 (44%), Gaps = 31/307 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
++P +Y ++ I A +F A+ C+ +E V V + LI AY
Sbjct: 406 VRPDRVSYNTLIDIYAKLGRFDDALTA-CKDMERV-GLKADVVTYNALID-------AYG 456
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +++ F K G P++++ + L++ K ++ E R G+ P+
Sbjct: 457 KQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVV 516
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA------- 294
++ L CK G V+ L+++ + G P++VTYN+LI +Y + G++++
Sbjct: 517 LYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNM 576
Query: 295 -FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
++ + R+ T T+ N G V A +FH M GL P++V+++ ++
Sbjct: 577 PINVFNKVGDRSTEIICKTLTSQQNANDHTG-VLAAVSVFHEMQQFGLKPNVVTFSAILN 635
Query: 354 AYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL--NLVVELQRFGV 411
A + +QE+ LL +M + D++ YG LL L ++ VE QR
Sbjct: 636 ACSRCSSLQEASVLLEQMR----FFDSWV-------YGIAHGLLMGLREHVWVEAQRLFD 684
Query: 412 SISRDIY 418
I+R Y
Sbjct: 685 EIARMDY 691
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 200/404 (49%), Gaps = 20/404 (4%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G ++FK + + GF P + + ++ L + +++ + ++EEM R GI P+ +T
Sbjct: 438 AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYT 497
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+ IL FCK G + + + +++ +G P++VTY LI +Y K ++ A L+ +M
Sbjct: 498 YTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML 557
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG------------------LSPD 344
P++VTYT L++G CK G++ +A Q++ RM RG P+
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPN 615
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVV 404
+++Y L+ CK +++E+ LL M+ +G P+ ++ G+ K G+L A +
Sbjct: 616 VITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFT 675
Query: 405 ELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD 464
++ G S + Y I L +DNR +L ++ ++ P++ IY E+++ LCK
Sbjct: 676 KMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIG 735
Query: 465 SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICR 524
+A L +M ++ P++ TY A+I F G+ + + L +M G P+ R
Sbjct: 736 KTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795
Query: 525 VLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAED 568
VLIN C +++A LL + + S+ + F+++
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE 839
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 213/466 (45%), Gaps = 29/466 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+ + C + ++F LI AY K ++K F+K + G QP + N +
Sbjct: 341 ITEGCYPNREIFNSLIH-------AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGS 393
Query: 215 LLK------LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ + +D + Y EM +G+ N + C G D+ + ++
Sbjct: 394 VCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMG 453
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +I C ++ AF L+ M R ++P + TYT L++ CK G +++
Sbjct: 454 KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F M+H+G +P++V+Y LI AY K +M + L M+ G P+ T ++
Sbjct: 514 ARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALID 573
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRD----------------IYDYLIVALCQDNRPF 432
G+ K G++ A + ++ S D Y L+ LC+ NR
Sbjct: 574 GHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVK 633
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A LL+ + G P+ +Y+ +++ CK + DA + +M +R P+L TY + I
Sbjct: 634 EAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C R + ++ +MLE+ P+ I +++G C ++A L+ +K
Sbjct: 694 DCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN 753
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ +Y A+ + F + G + + +EL + G APN +T + +I+
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 169/389 (43%), Gaps = 8/389 (2%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVD 257
D G++PS + N L+ L+ + +D + V EM + +T + + CK G
Sbjct: 204 DFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCR 263
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ ++ E E F PD V YN ++S C+ +A + M + +P++VTY L+
Sbjct: 264 EAFDLID--EAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILL 321
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+G ++G++ ++ M+ G P+ +N+LI AYCK + L +M+ G
Sbjct: 322 SGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQ 381
Query: 378 PDTFTCQIIVQGY--GKEGRLLSALNLV----VELQRFGVSISRDIYDYLIVALCQDNRP 431
P I + +E L+LV E+ GV +++ LC +
Sbjct: 382 PGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKF 441
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A ++ + G+VP Y++++ LC V A L +EM I PS+ TY L
Sbjct: 442 DQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTIL 501
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I FC G +A DEML G P+ LI+ Y K + A+ L +
Sbjct: 502 IDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC 561
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +Y A+ + + G + K ++ R
Sbjct: 562 KPNVVTYTALIDGHCKAGQIEKACQIYAR 590
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 4/332 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K ++E+ + L G +P+ + + +++G K+ + +V+ +M G PN +
Sbjct: 628 KANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLY 687
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ K+ +D V L K+ E P++V Y ++ CK G+ ++A+ L M
Sbjct: 688 TYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKM 747
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P++VTYT +++G K GK+ + +LF M +G +P+ ++Y LI C G +
Sbjct: 748 EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLL 807
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ LL EM + + I++G+ +E ++++ L+ EL +Y L
Sbjct: 808 DEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRIL 865
Query: 422 IVALCQDNRPFAATSLLERIGQ--DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I + R A LLE I V + +Y L+E+L V AL L M+ +
Sbjct: 866 IDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISK 925
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
N+ P LS LI + + EA+ L D +
Sbjct: 926 NVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 161/369 (43%), Gaps = 8/369 (2%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L C+NG + L ++++ G+ P TYN LI + + +L+ A+ + R M
Sbjct: 179 LNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREML 238
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ D T + LCK GK REA L PD V YN ++ C+ +
Sbjct: 239 SYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFE 296
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ +L+ M + P+ T +I++ G ++G+L ++ + G +R+I++ LI
Sbjct: 297 EAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLI 356
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLK------DEM 476
A C+ A L +++ + G P +YN + S+C + + +L EM
Sbjct: 357 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEM 416
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+D + + C CG G+ +A ++ EM+ G +PD +I C V
Sbjct: 417 LDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKV 476
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
KA +L + + +Y + + F + G + + + L G PN +T +
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536
Query: 597 IHSLWKGME 605
IH+ K +
Sbjct: 537 IHAYLKAKQ 545
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 174/385 (45%), Gaps = 16/385 (4%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
+R +S +F N+ E P Y +V L N+ A ++L + L C
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCE-GPNVITYGALVDGLCKANRVKEAHELLDTM--LAHGC 647
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
+ V+ +I + K+G ++++ + F K + G+ P++ + + ++ L K N
Sbjct: 648 EPNQIVYDAVID-------GFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDN 700
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+D +V +M PN + + CK G D+ + K+EE+G +P++VTY
Sbjct: 701 RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYT 760
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+I + K G++ L+R M + P+ +TY L+N C G + EA++L M
Sbjct: 761 AMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQT 820
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
I+S+ +I + +E S LL E+ N P +I++ Y K GRL A
Sbjct: 821 YWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVA 878
Query: 400 LNLVVELQ---RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L+L+ E+ VS ++ +Y LI L ++ A L + VP L I L
Sbjct: 879 LDLLEEISSSPSHAVS-NKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHL 937
Query: 457 MESLCKCDSVADALLLKDEMVDRNI 481
++ L K D +AL L D + +I
Sbjct: 938 IKGLIKVDKWQEALQLSDSICQMDI 962
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 2/209 (0%)
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
L ++E++ + R + ++L+ C++ A L R+ GY PS YN L++
Sbjct: 161 LKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQV 220
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
+ D + A L+K EM+ T C G+ EA L+DE +PD
Sbjct: 221 FLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPD 278
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
+ +++G C +A +L I + +Y + + G L + +
Sbjct: 279 TVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILS 338
Query: 580 RFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ G PN +IH+ K + +
Sbjct: 339 MMITEGCYPNREIFNSLIHAYCKSRDYSY 367
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 177/347 (51%), Gaps = 5/347 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PN 239
+ G + ++ + F +L++ QP +VS L+NGL KL +D + ++ +M G C PN
Sbjct: 72 RCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPN 131
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L CK +D + + + F PD+VTYNTL+++ + GR+++A +
Sbjct: 132 AFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT 191
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +P LV++ ++ GLC+ ++ +A ++F+ M+ R P++V+Y+ +I CK
Sbjct: 192 QMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 251
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E++ LL M+ G PD +V G+ GRL SAL L+ + G Y
Sbjct: 252 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 311
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ R A + + + P++ Y+ L+ C+ V + + EM
Sbjct: 312 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA-- 369
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+P++ TY +I + R+ EA + EM E G +PD++ R L
Sbjct: 370 -CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 173/371 (46%), Gaps = 15/371 (4%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G ++ + FR+ S V+ N L+ G + +D + + EM G+ N
Sbjct: 2 VRAGSHNQALQLFREN-PCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCND 60
Query: 241 HTFNILTHVFCKNGDVDK-VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T +I+ C+ G V + + F +E PD+V+Y TLI+ CK GR++ AF L+R
Sbjct: 61 RTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFR 120
Query: 300 IMYRRN-VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P+ TY L++GLCK+ ++ A + R +PD+V+YNTL+ A +
Sbjct: 121 KMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQL 180
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI- 417
G++ E+ + +M G P + I+ G + RL AL + E+ I RD
Sbjct: 181 GRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM------IDRDFH 234
Query: 418 -----YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
Y +I LC+ ++ A LL+R+ +G P L Y L+ + AL L
Sbjct: 235 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 294
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
MV + P + TY +I C +GR +A + E++ + P+ LI GYC
Sbjct: 295 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 354
Query: 533 EKDVNKAEALL 543
V++ ++
Sbjct: 355 ASRVDEGGKVM 365
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 161/324 (49%), Gaps = 2/324 (0%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
VTYN LI +C L+ AF L R M + + T + ++ GLC+ G+V +A + F
Sbjct: 26 VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85
Query: 336 MVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG-NGIYPDTFTCQIIVQGYGKE 393
+ PD+VSY TLI CK G++ + L +M+ G P+ FT +V G K+
Sbjct: 86 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
RL +A ++ E ++ + Y+ L+ AL Q R A + ++ ++GYVP+L +
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LC+ +ADAL + +EM+DR+ P+L TY +I C + EA L+D M+
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G PD L+ G+ ++ A LL + I D +Y V + + G +
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDD 325
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
E+ + + +PN +T +I
Sbjct: 326 AHEIFRELVANKCSPNVVTYSALI 349
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 151/309 (48%), Gaps = 12/309 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y +V L ++ A ++ E + +D V + L++ A +
Sbjct: 129 RPNAFTYNALVDGLCKQDRLDAARAVITEARK--RDFAPDVVTYNTLMA-------ALFQ 179
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G + E+ TF + + G+ P++VS N ++ GL + + +V+ EM PN T
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++++ CK+ +D+ L+++ EG PDLV Y L+ + GRL+ A L R M
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ +PD+VTYT +++ LCK G+V +AH++F +V SP++V+Y+ LI YC+ ++
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E ++ EM P+ T ++ G R A + E+ G Y L
Sbjct: 360 EGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 416
Query: 423 VALCQDNRP 431
AL ++P
Sbjct: 417 RALRMIDQP 425
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 116/287 (40%), Gaps = 42/287 (14%)
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
+ + G +A QLF + L V+YN LI +C + + SLL EM G+ +
Sbjct: 1 MVRAGSHNQALQLFRENPCQ-LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59
Query: 380 TFTCQIIVQGYGKEGRLLSAL---NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
T II+QG + GR+ AL + +EL + Y LI LC+ R AA
Sbjct: 60 DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVS--YTTLINGLCKLGRVDAAFD 117
Query: 437 LLER-IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
L + + G P+ YN L++ LCK D + A + E R+ P + TY L+
Sbjct: 118 LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAAL 177
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
+GR EA++ +M E G +P L+
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVP------TLV---------------------------- 203
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+NA+ L+ +E+ + F PN +T +I L K
Sbjct: 204 -SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 249
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ LI C + AA SLL + +G + + +++ LC+C VA AL D +
Sbjct: 28 YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87
Query: 478 D-RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG-MLPDSQICRVLINGYCMEKD 535
+ + +P + +Y LI C +GR A L +M+ +G P++ L++G C +
Sbjct: 88 ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
++ A A++ K+ D +YN + + G + + + + G+ P ++
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207
Query: 596 MIHSLWKG 603
+I L +
Sbjct: 208 IITGLCRA 215
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 189/413 (45%), Gaps = 35/413 (8%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ +F + LD QP I+ N LL+ ++++ + +++EM GI N T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+IL + FC VD K + GF PD+V + TLI C+ G+ A L + M
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+PD+VT +LM G C +GK+ + ++FH MV +GL PD+ SY+ I YCK K+ E
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L EM G+ P+ T Y+ LI
Sbjct: 199 AMELFDEMSHRGVVPNAVT-----------------------------------YNTLIK 223
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
ALCQ RP A L ++ G P + Y+ L++ CK ++ + L+L EM R +KP
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKP 283
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
L Y +I C + +A ++ ++ G+ PD L++G C E + +A L
Sbjct: 284 DLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLF 343
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ + + SYN + + D S +++L GF + +T ++
Sbjct: 344 RKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 6/248 (2%)
Query: 169 LISCTED---CN---WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
L+ C D CN Y G I + K F + G +P + S + +NG K+ ID
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ ++++EM G+ PN T+N L C+ K+ G PD++ Y+TL+
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLL 257
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+CK+G L++ L++ M RR V PDLV YT ++NG+C+ KV++A ++ R++ GL
Sbjct: 258 DGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLK 317
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
PD+ +Y L+ C+EG + E+ L +M +G P + + +++QG + + + L
Sbjct: 318 PDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQL 377
Query: 403 VVELQRFG 410
+ E+ G
Sbjct: 378 IHEMADRG 385
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 138/274 (50%)
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
VG P +V+CN L+ G ID+ +++ M G+ P+ ++++I + +CK +D+
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
+++ G P+ VTYNTLI + C+ R DA L+R M + PD++ Y+TL++
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G CK+G + E LF M R + PD+V Y +I C+ K++++K +L ++ G+ P
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKP 318
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T +V G +EG ++ AL L +++ G Y+ L+ Q N L+
Sbjct: 319 DVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLI 378
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ G+ L + L DS A LL
Sbjct: 379 HEMADRGFYADAVTRTFLKDFLPGNDSPAIKQLL 412
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 143/349 (40%), Gaps = 35/349 (10%)
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G++D ++ + P ++ +N L+SS + + L++ M R + ++ T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+ L+N C V +F + + RG PD+V + TLI C+ GK + + LL EM
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
G PD TC +++GY +G+ + R I+ ++
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGK---------------IDKVRKIFHLMV----------- 172
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
G P + Y+ + CK + + +A+ L DEM R + P+ TY LI
Sbjct: 173 ---------SKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIK 223
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C R +A L +M G+ PD L++G+C + ++++ L ++
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKP 283
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
D Y + N + E+ R + G P+ T ++ L +
Sbjct: 284 DLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCR 332
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 57/129 (44%)
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R KP + + LI C IG++ A L+ EM G +PD C L+ GYC + ++K
Sbjct: 104 RGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDK 163
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+ K D SY+ N + + + + MEL G PN +T +I
Sbjct: 164 VRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIK 223
Query: 599 SLWKGMERK 607
+L + + +
Sbjct: 224 ALCQALRPR 232
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K G + E F++ +P +V ++NG+ + + +V + G+ P
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKP 318
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ HT+ L C+ G + + K+EE+G P +YN L+ + + L
Sbjct: 319 DVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLI 378
Query: 299 RIMYRRNVLPDLVTYTTL 316
M R D VT T L
Sbjct: 379 HEMADRGFYADAVTRTFL 396
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 211/490 (43%), Gaps = 71/490 (14%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AYV GL+ + + + D+ + P +++CN LLN L++ ++ +VYEEM + C
Sbjct: 143 AYVDSGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGC 202
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ I+ CK V++ + +G P++V YNTL+ Y K+G + A L
Sbjct: 203 WDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGL 262
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL---------------- 341
++ + + LP TY ++NGLCK+ + L M RG+
Sbjct: 263 FKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIK 322
Query: 342 -------------------SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
PDI +YNTLI C++GK+ E++ LL + G+ P+ +
Sbjct: 323 HGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLS 382
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ Y K+G+ L A +L + + G + Y L+ L A ++ +++
Sbjct: 383 YTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMV 442
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK-------------------- 482
+ G +P +YN LM LCK ++ A LL EM+ +N+
Sbjct: 443 ERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLD 502
Query: 483 ---------------PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
P + Y A+I +C G +A++ + M + PD +I
Sbjct: 503 EAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTII 562
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+GY + D++ A L G K+ + +Y ++ N F GD S+ + + G
Sbjct: 563 DGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLK 622
Query: 588 PNNLTCKYMI 597
PN +T +I
Sbjct: 623 PNVVTYTILI 632
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 217/493 (44%), Gaps = 27/493 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT+ Y ++++ L F +L E+ E D +V V+ ++ A +K
Sbjct: 273 PTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDV--NVQVYNSIVD-------AQIKH 323
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G E KT R + G +P I + N L++G + + + ++ E + G+ PN ++
Sbjct: 324 GCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSY 383
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L HV+CK G + + E+G DLV Y L+ G ++ A + M
Sbjct: 384 TPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVE 443
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R VLPD Y LMNGLCK+G++ A L M+H+ LS D TL+ + + GK+ E
Sbjct: 444 RGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDE 503
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K L + G+ P +++GY K G + AL V ++ S Y +I
Sbjct: 504 AKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIID 563
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ N A L ++ + P++ Y L+ C+ + A +EM +KP
Sbjct: 564 GYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKP 623
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY------CMEKDVN 537
++ TY LI CFC G+ +A S + ML + +P+ LING + N
Sbjct: 624 NVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKAN 683
Query: 538 -----KAEALLGFFAKKFQIYD-----TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
KA ++ FF + I D +YN+V ++ ++L+ + G
Sbjct: 684 ESLEIKASLMMDFF--RTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIF 741
Query: 588 PNNLTCKYMIHSL 600
P+ ++ +++ L
Sbjct: 742 PDPVSFAALVYGL 754
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 1/333 (0%)
Query: 258 KVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTL 316
+V LE ++ + P + ++ +Y G +N A LY I Y N LPD++ L
Sbjct: 117 EVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNYLPDVIACNAL 176
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N L ++ KV A +++ MV R D S ++ CKE K++E + L+ + G G
Sbjct: 177 LNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGC 236
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P+ +V GY K G + A L EL+ G + + Y +I LC+ A
Sbjct: 237 IPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDG 296
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL + + G ++++YN ++++ K + + + +P ++TY LI C
Sbjct: 297 LLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSC 356
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ EA L++ ++ G+ P+ LI+ YC + +A L +K D
Sbjct: 357 RDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLV 416
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
+Y A+ + G++ + ++ + + G P+
Sbjct: 417 AYGALVHGLVAAGEVDVALTVRDKMVERGVLPD 449
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 14/231 (6%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G++ ++ ++ D P + + +++G +K N + +++ +M + P
Sbjct: 529 GYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKP 588
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L + FC+ GD + E++ G P++VTY LI +CK+G+++ A +
Sbjct: 589 NVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFF 648
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCK------EGKVREAHQL--------FHRMVHRGLSPD 344
+M +P+ VT+ L+NGL K E+ ++ F M+ G
Sbjct: 649 ELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQR 708
Query: 345 IVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
+ +YN+++ C + + L +M G GI+PD + +V G EGR
Sbjct: 709 VAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGR 759
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 89/225 (39%), Gaps = 54/225 (24%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
V+ +KD HS D F S D YVK + + K F + + +P++V+ L+
Sbjct: 543 VQRMKDGDHSPDEFT--YSTIID---GYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLI 597
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK-------------- 258
NG + + + +EEM G+ PN T+ IL FCK G + K
Sbjct: 598 NGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCI 657
Query: 259 ---------VNG--------------------------FLEKIEEEGFDPDLVTYNTLIS 283
+NG F + +G++ + YN+++
Sbjct: 658 PNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLI 717
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
C +N A L M + + PD V++ L+ GLC EG+ +E
Sbjct: 718 CLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKE 762
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 202/412 (49%), Gaps = 23/412 (5%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCI----DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
G +P++ +CN L+ +L I Q + ++++ +G + ++ L H CK G+
Sbjct: 116 GIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGE 175
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
L++++ + + V YNT+I CK +NDAF LY M + + P++VTY+
Sbjct: 176 TRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 235
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L++G GK+++A LF++++ + PD ++N L+ +CK+ KM+E K++ MM G
Sbjct: 236 LISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG 295
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
I PD T ++ GY + +A ++ + + GV+ Y+ LI C+ + A
Sbjct: 296 IIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAM 355
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+L + +P++ YN L++ L K ++ AL L D+M DR + P++ TY ++I
Sbjct: 356 NLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDAL 415
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD- 554
+ +A++L+ + + G+ P +LI+G C K + YD
Sbjct: 416 FKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC-----------------KVEGYDI 458
Query: 555 -TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YN + + F + G + + L + PN +T + I SL E
Sbjct: 459 TVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNE 510
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 177/362 (48%), Gaps = 15/362 (4%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KVG R + ++ Q + V N ++ G+ K ++ + +Y EM GI PN
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ L F G + KI E PD T+N L+ +CK ++ + ++ +M
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ ++PD+VTY +LM+G C +V A +F+ M G++PDI SYN LI +CK K+
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ +L EM I P+ T ++ G K GR+ AL LV ++ GV + Y+ +
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 411
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I AL + ++ A +L+ + G PS+ Y L++ LCK +
Sbjct: 412 IDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGY--------------- 456
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+++TY +I FC G EA+SL+ +M +S +P++ + I + +KAE
Sbjct: 457 DITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEK 516
Query: 542 LL 543
L
Sbjct: 517 LF 518
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 39/388 (10%)
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
N +D ++ + R P FN + K+ V +K+E G P+L
Sbjct: 65 NDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNC 124
Query: 279 NTLISSYCKKG----RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
N LI +C+ G +++ AF + + D V+Y TL++GLCK G+ R A L
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQ 184
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
R+ + + + V YNT+I+ CK+ + ++ L EM+ GI P+ T ++ G+ G
Sbjct: 185 RVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVG 244
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
+L A++L ++ +LE I DGY +N
Sbjct: 245 KLKDAIDLFNKI------------------------------ILENIKPDGYT-----FN 269
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L++ CK + + + M+ + I P + TY +L+ +C + A S+ + M +
Sbjct: 270 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG 329
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G+ PD + +LING+C K V+KA L K I + +YN++ + ++ G +S
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++L + G PN LT +I +L+K
Sbjct: 390 LQLVDQMHDRGVPPNILTYNSIIDALFK 417
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 156/310 (50%), Gaps = 15/310 (4%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ VG ++++ F K + +P + N L++G K + + V+ M + GI P
Sbjct: 239 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 298
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L +C +V+ + + G +PD+ +YN LI+ +CK +++ A L+
Sbjct: 299 DVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLF 358
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M+ +N++P++VTY +L++GL K G++ A QL +M RG+ P+I++YN++I A K
Sbjct: 359 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 418
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ ++ +L+ + GI P +T I++ G K VE G I+ + Y
Sbjct: 419 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK-----------VE----GYDITVNTY 463
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ A SLL ++ +P+ Y + SL + A L EM+
Sbjct: 464 NVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMIT 523
Query: 479 RNIKPSLSTY 488
R + ++Y
Sbjct: 524 RGLLNRSASY 533
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 159/333 (47%), Gaps = 4/333 (1%)
Query: 274 DLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+ ++Y++ +++ ++DA L+ + R+N P + ++ L K L
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKM--QESKSLLY--EMMGNGIYPDTFTCQIIVQG 389
+M RG+ P++ + N LI+ +C+ G + Q ++ L+ +++ G + D + ++ G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G +AL+L+ + V ++ +Y+ +I +C+D A L + G P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ Y+ L+ + DA+ L ++++ NIKP T+ L+ FC + E ++
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFA 289
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
M++ G++PD L++GYC+ K+VN A+++ A+ D SYN + N F +
Sbjct: 290 MMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIK 349
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ K M L PN +T +I L K
Sbjct: 350 KVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSK 382
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 26/186 (13%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N L++GL K I Q+ ++M G+ PN T+N + K VDK
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427
Query: 263 LEKIEEEGFDPDLVTY--------------------NTLISSYCKKGRLNDAFYLYRIMY 302
+ K +++G P + TY N +I +CKKG ++A L M
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMK 487
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ +P+ VTY + L + +A +LF M+ RGL SY C K+
Sbjct: 488 DSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASYP------CSSMKIH 541
Query: 363 ESKSLL 368
+S +++
Sbjct: 542 QSLTMV 547
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 39/213 (18%)
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A SL R+ + P +N+++ SL K L L +M R IKP+L LI
Sbjct: 70 AVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIY 129
Query: 494 CFCGIG----RSGEAVSLMDEMLESGMLPDS--------QICRV---------------- 525
CFC +G + +A D+++ G D +C+V
Sbjct: 130 CFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGK 189
Query: 526 -----------LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
+I G C +K VN A L K + +Y+A+ + F G L
Sbjct: 190 LVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDA 249
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
++L + + P+ T ++ K + K
Sbjct: 250 IDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 282
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 214/465 (46%), Gaps = 29/465 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+++ C S +F L+ AY G ++K +K + G P V N L+
Sbjct: 364 MMEGCYPSPKIFNSLVH-------AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 215 LL----KLNC--IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ LNC +D + Y EM G+ N + T C G +K + ++
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +++ C ++ AF L+ M R ++ D+ TYT +++ CK G + +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F+ M G +P++V+Y LI AY K K+ + L M+ G P+ T ++
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 389 GYGKEGRLLSALNLVVEL-------------QRFGVSISRD---IYDYLIVALCQDNRPF 432
G+ K G++ A + + +++ + R Y L+ C+ +R
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A LL+ + +G P+ +Y+ L++ LCK + +A +K EM + +L TY +LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ + R A ++ +MLE+ P+ I +I+G C ++A L+ +K
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +Y A+ + F G + +EL +R G APN +T + +I
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 241/518 (46%), Gaps = 34/518 (6%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVS- 108
F+P+T +K+++ +C++ K + L + L+ + + I V C++ +
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI-MVDSFCKAGLIEQ 536
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +FN ++ ++ P Y ++H K S+A ++ + L + C ++ +
Sbjct: 537 ARKWFNEMR-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETM--LSEGCLPNIVTYSA 593
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKT--------LDVGFQ--------PSIVSCNFLL 212
LI + K G + ++ + F + +D+ F+ P++V+ LL
Sbjct: 594 LID-------GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G K + +++ ++ + M G PN ++ L CK G +D+ ++ E GF
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
L TY++LI Y K R + A + M + P++V YT +++GLCK GK EA++L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G P++V+Y +I + GK++ LL M G+ P+ T ++++ K
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT-SLLERIGQDGYVPSLE 451
G L A NL+ E+++ Y +I N+ F + LL+ IGQD P L
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFIESLGLLDEIGQDDTAPFLS 883
Query: 452 IYNELMESLCKCDSVADALLLKDEMV--DRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+Y L+++L K + AL L +E+ + STY +LI C + A L
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
EM + G++P+ Q LI G +++A LL F +
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFIS 981
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 211/489 (43%), Gaps = 20/489 (4%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+LR + + ++FF W + K T+ Y +V ++ ++ K+ E ++ ++D
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDD----EKVPEEFLQQIRD 193
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
+VF + ++ + + G + + + D F+PS + N L+ LK
Sbjct: 194 --DDKEVFGEFLNVLVR---KHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ +D ++ EM + + T + CK G K L +E E F PD V Y
Sbjct: 249 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG---KWREALTLVETENFVPDTVFY 305
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
LIS C+ +A M + LP++VTY+TL+ G + ++ ++ + M+
Sbjct: 306 TKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMM 365
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G P +N+L+ AYC G + LL +M+ G P I++ + L+
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Query: 399 ------ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERIGQDGYVPSLE 451
A E+ GV +++ LC + A S++ E IGQ G++P
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFIPDTS 484
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y++++ LC + A LL +EM + + TY ++ FC G +A +EM
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
E G P+ LI+ Y K V+ A L + + + +Y+A+ + + G +
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 572 SKLMELQKR 580
K ++ +R
Sbjct: 605 EKACQIFER 613
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 15/370 (4%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N+L C+NG L ++++ F P TYN LI ++ K RL+ A ++R M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
N+ D T LCK GK REA L PD V Y LI C+ +
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFE 319
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQG---YGKEGRLLSALNLVVELQRFGVSISRDIYD 419
E+ L M P+ T ++ G + GR LN+ + G S I++
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIFN 376
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC------KCDSVADALLLK 473
L+ A C A LL+++ + G++P +YN L+ S+C CD + A
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM+ + + + C C G+ +A S++ EM+ G +PD+ ++N C
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ A L + + D +Y + + F + G + + + +G PN +T
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 594 KYMIHSLWKG 603
+IH+ K
Sbjct: 557 TALIHAYLKA 566
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV----TYNTLISS 284
+E+G+ P + +L K ++ LE++ F LV TYN+LI S
Sbjct: 871 DEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLIES 928
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
C ++ AF L+ M ++ V+P++ ++ +L+ GL + K+ EA L + H
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 191/414 (46%), Gaps = 1/414 (0%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+F L G P+ + N L+N KL + M G+ P+T T+N L
Sbjct: 75 LASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLG 134
Query: 250 FCKNGDVDKVNG-FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C+ G + G F++ G D +Y LI C GR++DA ++ M R P
Sbjct: 135 LCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRP 194
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ TYT L++GLCK +V EA L MV++G+ P++V+YN LI C+EG+ + LL
Sbjct: 195 GVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLL 254
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M PD +T +V G K G++ ++ E GV++ Y+ LI C+
Sbjct: 255 EKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKG 314
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
AA +L+ + ++ P ++ +NE++ C V A+ +M + P+ T+
Sbjct: 315 GDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTF 374
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
+LI C +G A+ L+D M E G+LPD Q + I+ C E + +A +L
Sbjct: 375 NSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPM 434
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K Y ++ + + + GD+ L ++ P+ T +I L K
Sbjct: 435 KGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCK 488
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 187/395 (47%)
Query: 207 SCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKI 266
S L+ GL ID +V+ +M R P HT+ +L CK V + L ++
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
+G P++VTYN LI C++GR +D L M + PD TYT +++GLCK GKV
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKV 282
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++ H + +G++ ++++YN LI YCK G M+ + +L M N + P T +
Sbjct: 283 GHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEV 342
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G+ G++ A+ + ++ G+S + ++ LI C A LL+ + + G
Sbjct: 343 IHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+P + Y +++LC + +A L + + IK Y +L+ +C +G A
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
LM++M +PD LI+G C K +++A LL K+ T ++N +
Sbjct: 463 LMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQML 522
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
D + ++ ++ + G P+ T I + W
Sbjct: 523 WDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 199/419 (47%), Gaps = 14/419 (3%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
KV + E+ + ++ G P++V+ N L+ GL + D ++ E+M P+
Sbjct: 208 KVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCW 267
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + H CK+G V L + +G +++TYN LI+ YCK G + A + ++M
Sbjct: 268 TYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLM 327
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V P + T+ +++G C GKV +A +M GLSP+ V++N+LI C G+
Sbjct: 328 KRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGER 387
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + LL M G+ PD T I + EG+L A +L L G+ IY L
Sbjct: 388 KIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSL 447
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ CQ +A L+E++ + +P + YN L++ LCK + A+ L D+M + I
Sbjct: 448 VHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN-----GYCMEKDV 536
+P+ T+ LI + +A + ++M+ SG PD Q + I+ G E+++
Sbjct: 508 EPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENI 567
Query: 537 NKAEALL---GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
+ A + G F D E+YNA+ + + G K + L + P+ T
Sbjct: 568 DMAVVEMHEAGVFP------DVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTT 620
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 2/406 (0%)
Query: 198 DVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPNTHTFNILTHVFCKNGDV 256
+ G P + N L+ GL + + ++ +M R G C + +++ IL C G +
Sbjct: 118 EAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRI 177
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D K+ P + TY L+ CK R+ +A L M + V+P++VTY L
Sbjct: 178 DDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNAL 237
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ GLC+EG+ + +L +M + SPD +Y ++ CK GK+ +L+E +G G+
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+ T ++ GY K G + +AL+++ ++R V+ ++ +I C + A +
Sbjct: 298 ALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
L ++ G P+ +N L+ C AL L D M + + P TY I C
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
G+ EA SL + G+ + I L++GYC D++ A L+ A + + D
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVH 477
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS-LW 601
+YN + + + L + ++L + + G P T +I LW
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 163/345 (47%)
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I ++ + F K +P + + LL+GL K+ + + + EM G+ PN T
Sbjct: 174 AGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVT 233
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L C+ G D V LEK+E + PD TY ++ CK G++ +
Sbjct: 234 YNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI 293
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ V +++TY L+NG CK G ++ A + M ++P + ++N +I +C GK+
Sbjct: 294 GKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVH 353
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + L +M G G+ P+T T ++ G G AL L+ ++ +GV R Y I
Sbjct: 354 KAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFI 413
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
ALC + + A SL + G IY L+ C+ + A L ++M N
Sbjct: 414 DALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCM 473
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
P + TY LI C + R A+ L+D+M + G+ P + +LI
Sbjct: 474 PDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 148/344 (43%), Gaps = 6/344 (1%)
Query: 271 FDP-DLVTYNTLISSYCKKG----RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
DP D+ ++N + +Y +G RL + M + P+ TY TL+N CK
Sbjct: 46 LDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLAL 105
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQ 384
+ +A RM GL+PD +YN L+ C+ G + + L +M G D ++
Sbjct: 106 LADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYT 165
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I+++G GR+ A + ++ R Y L+ LC+ R A +LL +
Sbjct: 166 ILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK 225
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G VP++ YN L+ LC+ D L ++M + P TY ++ C G+ G
Sbjct: 226 GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHG 285
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++ E + G+ + LINGYC D+ A +L + +++N V +
Sbjct: 286 AKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHG 345
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
F G + K M + G +PN +T +I ERK
Sbjct: 346 FCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKI 389
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 199/515 (38%), Gaps = 61/515 (11%)
Query: 104 SDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
D +AL +K + + P + ++H K AM L ++ P++V
Sbjct: 315 GDMKAALDVLQLMKRN-RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG-AGLSPNTV 372
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
F LIS VG + + + + G P + ++ L +++
Sbjct: 373 -TFNSLIS-------GQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
++ + GI + + L H +C+ GD+D G +EK+ E PD+ TYNTLI
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
CK RL+ A L M ++ + P T+ L+ + + K +A +++ +M+ G P
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKP 544
Query: 344 DIVSYNTLIFAYCKEGKMQESK--SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
D +Y I EG +E + EM G++PD T I++ Y G A
Sbjct: 545 DKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFF 604
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFA--------------ATSLLERIGQDGYV 447
V++ + Y L+ +C + A L E++ +
Sbjct: 605 AHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAA 664
Query: 448 PSLEIYNELMESLC---KCDSV--------ADALLLKDEMVD------------------ 478
P + Y L+ LC + + V +++LL ++M D
Sbjct: 665 PGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQ 724
Query: 479 ------RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM 532
++ +P L + L+ C G G AVS+ +ML G D + ++LI+
Sbjct: 725 FRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHE 784
Query: 533 EKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
+ +L K + T +Y ++ + AE
Sbjct: 785 KGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAE 819
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 178/349 (51%), Gaps = 1/349 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+P+++S + +++GL K+ ++ ++ EM G+ PN TF++L + CK G V K
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
LE + + G P+L TY +LI +C G LN A L+ M + PD+++Y L+NG C
Sbjct: 294 LLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYC 353
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
K KV EA +LF+ M+H G+ PD+ + L+ A GK+ ++K L + + D
Sbjct: 354 KTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLC 413
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
C I + G K G + A+ L EL+ + + + + + LI LC+ + A L E++
Sbjct: 414 ICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKL 473
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
++G P Y+ ++ CK V A +L +M + P L TY L+ F +
Sbjct: 474 YEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKL 533
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG-FFAKK 549
+ V L+ M+E + PD I ++ + C ++ + LL FF +K
Sbjct: 534 EKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 199/403 (49%), Gaps = 6/403 (1%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM-----GRIGIC-PN 239
I E+ K F + +G P++V+ L+ GL L I+ + ++EM + C PN
Sbjct: 177 IIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPN 236
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+++I+ CK G+ ++ ++ ++G P++VT++ LI CK+G++ A L
Sbjct: 237 VISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLE 296
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+M + ++P+L TYT+L+ G C G + A +LF M +G PD++SYN LI YCK
Sbjct: 297 MMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTL 356
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+ L EM+ G++PD T ++++ G++ A L ++ + + I
Sbjct: 357 KVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICC 416
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+ LC++ F A L + +E + L++ LCK + A L +++ +
Sbjct: 417 IFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEE 476
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
I+P Y ++I FC G+ +A L +M E+G PD +L+ G+ + K
Sbjct: 477 GIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKV 536
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LL +K D Y V +M +D + ++L +RF
Sbjct: 537 VQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFF 579
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 186/405 (45%), Gaps = 6/405 (1%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
SI S N LL GL K+ Q + +Y++M G+ P+ T NIL + C +++ +
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
I G+ PD+VT+ TLI C + R+ +A L+ M + P++VTY TL+ GLC
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 324 GKVREAHQLFHRMVHR------GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
G + A + M++ P+++SY+ +I CK G +E+ L EM+ G+
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ T +++ KEG+++ A L+ + + G+ + Y LI C +A L
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ GY P + YN L+ CK V +A+ L +EM+ + P + T L+
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFL 389
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G+ +A L + M D IC + ++G C + +A L D E+
Sbjct: 390 AGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIET 449
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + + G L EL ++ G P+ + MIH K
Sbjct: 450 FGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCK 494
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 214/477 (44%), Gaps = 49/477 (10%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+ + F +++ G P +++ N L+N L +N I++ + R G P+
Sbjct: 102 AKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDV 161
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
TF L C + + ++++ G P++VTY TLI C G +N A ++
Sbjct: 162 VTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQE 221
Query: 301 M------YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
M Y N P++++Y+ +++GLCK G EA LF+ MV +G+ P++V+++ LI
Sbjct: 222 MLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDM 281
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CKEG++ ++K LL M+ GI P+ FT +++G+ G L SA L V + G
Sbjct: 282 LCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPD 341
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES--------------- 459
Y+ LI C+ + A L + G P ++ L+++
Sbjct: 342 VISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR 401
Query: 460 --------------------LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
LCK + +A+ L +E+ N+K + T+ LI C G
Sbjct: 402 VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAG 461
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ A L +++ E G+ PD+ +I+G+C + V+KA L + D +Y+
Sbjct: 462 KLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYS 521
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPN--------NLTCKYMIHSLWKGMERKF 608
+ F E L K+++L R + P+ ++ CK + W + ++F
Sbjct: 522 ILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 164/340 (48%), Gaps = 16/340 (4%)
Query: 273 PDLVTYNTLISSY---CKKGRLN--DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVR 327
P+ +++ I + CK G ++ A + +M R + ++ L+ GL K
Sbjct: 54 PERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYS 108
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
+ L+ +M GL PD+++ N LI C ++ E + + +M G PD T ++
Sbjct: 109 QVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLI 168
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG-- 445
+G E R++ A L + +Q+ G + + Y LI LC A + + D
Sbjct: 169 KGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSP 228
Query: 446 YV----PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
YV P++ Y+ +++ LCK + +A+ L +EMVD+ ++P++ T+ LI C G+
Sbjct: 229 YVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQV 288
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+A L++ M++ G++P+ LI G+C+ D+N A+ L K D SYN +
Sbjct: 289 IKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNML 348
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
N + + + + M+L L +G P+ T ++ +L+
Sbjct: 349 INGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 147/304 (48%), Gaps = 6/304 (1%)
Query: 142 FSFAMKMLCELVELVK-----DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKT 196
FS + MLC+ +++K + + + +L + T + VG + + + F
Sbjct: 275 FSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIK-GFCLVGDLNSAKELFVSM 333
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
G++P ++S N L+NG K +++ +++ EM +G+ P+ T +L G V
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D I+ DL + CK G + +A L+ + N+ D+ T+ L
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCL 453
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
++GLCK GK+ A +LF ++ G+ PD ++Y+++I +CK+G++ ++ L +M NG
Sbjct: 454 IDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGC 513
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PD T I+++G+ + +L + L+ + V IY + +C+D +
Sbjct: 514 SPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLD 573
Query: 437 LLER 440
LL+R
Sbjct: 574 LLQR 577
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 13/293 (4%)
Query: 321 CKEGK--VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
CK G V +AHQ F M+ I S+N L+ K + SL +M G++P
Sbjct: 70 CKTGSISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
D T I++ R+ L + + R G + LI LC ++R AT L
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR------NIKPSLSTYRALI 492
R+ + G P++ Y L++ LC ++ AL EM++ N +P++ +Y +I
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
C +G EA+ L +EM++ G+ P+ VLI+ C E V KA+ LL + +
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ +Y ++ F GDL+ EL G+ P+ ++ +I+ K ++
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 201/423 (47%), Gaps = 2/423 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICPN 239
VKVG + + K F + G + N L++G K D+ +++E + + + PN
Sbjct: 197 VKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPN 256
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+NI+ + CK G D+ E++ + + D+ TY++LI C+ G ++ A +Y+
Sbjct: 257 VVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYK 316
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ +++ D VT+ ++NG C+ GK++E+ +L+ M +VSYN LI + G
Sbjct: 317 EIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENG 375
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K++E+ S+ + G P++ T +++ G K GRL AL + E + + Y
Sbjct: 376 KVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYS 435
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
++ LC++ R A S++ ++ + GY + N L+ + + DA+ EM +
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P++ +Y LI C R EA S + EMLE PD C +L++G C EK + A
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
L K D YN + + L ++L R PN +T ++
Sbjct: 556 LNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEG 615
Query: 600 LWK 602
L+K
Sbjct: 616 LYK 618
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 194/407 (47%), Gaps = 1/407 (0%)
Query: 194 RKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKN 253
R D P++V+ N ++NGL K D+ +++E M + + T++ L H C+
Sbjct: 246 RLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEA 305
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G++D ++I E D VT+N +++ +C+ G++ ++F L+ +M + N +V+Y
Sbjct: 306 GNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSY 364
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
L+ GL + GKV EA ++ + +G P+ +Y LI CK G++ ++ + E
Sbjct: 365 NILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAED 424
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
D + +V G KEGR+ A+++V ++ + G + + + LI + ++
Sbjct: 425 GPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLED 484
Query: 434 ATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALIC 493
A + + G P++ YN L++ LCK + ++A EM+++ KP + T L+
Sbjct: 485 AINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMD 544
Query: 494 CFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY 553
C + A++L + L+ G PD + +L++G C + A L + +
Sbjct: 545 GLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVP 604
Query: 554 DTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + N + + D K E+ L+ G P+ ++ I L
Sbjct: 605 NLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGL 651
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 1/351 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I+ESF+ + Q ++VS N L+ GL + +++ ++E + + G P
Sbjct: 336 GFCRAGKIKESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRP 394
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ +L H CKNG ++K ++ E+ D Y++++ CK+GR+++A +
Sbjct: 395 ESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIV 454
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R D L+NG + K+ +A F M +G SP IVSYNTLI CK
Sbjct: 455 NQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKA 514
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ S + EM+ PD TC +++ G +E ++ ALNL + G +Y
Sbjct: 515 ERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMY 574
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ LC + A L + + VP+L N LME L K A + D ++
Sbjct: 575 NILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILK 634
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ P + +Y I C R +A+ +++ L G+LP + +L+
Sbjct: 635 DGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 219/509 (43%), Gaps = 53/509 (10%)
Query: 134 HILAWNNKFSFAMKMLCELVELVK--DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFK 191
HIL S + + +V++VK CP DV +I AY K + ++
Sbjct: 49 HILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVIK-------AYAKNKMSNKALD 101
Query: 192 TFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVF 250
TF+ D+ G +P + S N LLN ++LN D+ + + PN T+NIL +
Sbjct: 102 TFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKIS 161
Query: 251 CKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL--- 307
CK ++K L+ + + PD+ +Y TLI+ K G L A ++ M R V+
Sbjct: 162 CKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADV 221
Query: 308 ---------------------------------PDLVTYTTLMNGLCKEGKVREAHQLFH 334
P++VTY ++NGLCK G+ E+ +++
Sbjct: 222 TCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWE 281
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
RM D+ +Y++LI C+ G + + + E++ + + D T ++ G+ + G
Sbjct: 282 RMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAG 341
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
++ + L + + + Y+ LI L ++ + A S+ E + + G P Y
Sbjct: 342 KIKESFELWMVMGKENCQTVVS-YNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYG 400
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ LCK + AL + E D K Y +++ C GR EA+S++++M +
Sbjct: 401 VLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKR 460
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK---KFQIYDTESYNAVFNMFAEDGDL 571
G D +C LING+ +K E + FF + K SYN + +
Sbjct: 461 GYKLDPHVCNPLINGFVR---ASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERF 517
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
S+ K L + P+ +TC ++ L
Sbjct: 518 SEAYSFVKEMLEKEWKPDMITCSLLMDGL 546
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 177/347 (51%), Gaps = 5/347 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PN 239
+ G + ++ + F +L++ QP +VS L+NGL KL +D + ++ +M G C PN
Sbjct: 22 RCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPN 81
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L CK +D + + + F PD+VTYNTL+++ + GR+++A +
Sbjct: 82 AFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFT 141
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +P LV++ ++ GLC+ ++ +A ++F+ M+ R P++V+Y+ +I CK
Sbjct: 142 QMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSD 201
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ E++ LL M+ G PD +V G+ GRL SAL L+ + G Y
Sbjct: 202 QLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYT 261
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I LC+ R A + + + P++ Y+ L+ C+ V + + EM R
Sbjct: 262 VVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR 321
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
P++ TY +I + R+ EA + EM E G +PD++ R L
Sbjct: 322 ---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 12/309 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y +V L ++ A ++ E + +D V + L++ A +
Sbjct: 79 RPNAFTYNALVDGLCKQDRLDAARAVIAEARK--RDFAPDVVTYNTLMA-------ALFQ 129
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+G + E+ TF + + G+ P++VS N ++ GL + + +V+ EM PN T
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++++ CK+ +D+ L+++ EG PDLV Y L+ + GRL+ A L R M
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ +PD+VTYT +++ LCK G+V +AH++F +V SP++V+Y+ LI YC+ ++
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 309
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E ++ EM P+ T ++ G R A + E+ G Y L
Sbjct: 310 EGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLK 366
Query: 423 VALCQDNRP 431
AL + P
Sbjct: 367 RALRMIDHP 375
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 168/367 (45%), Gaps = 11/367 (2%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PNTHTFNILTHVFCKNGDVDK 258
G Q + + + +L GL + + Q + ++ + P+ ++ L + CK G VD
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 259 V-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
+ F + + G P+ TYN L+ CK+ RL+ A + +R+ PD+VTY TLM
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
L + G+V EA F +M G P +VS+N +I C+ ++ ++ + EM+ +
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P+ T +++ G K +L A L+ + G Y L++ R +A L
Sbjct: 185 PNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGL 244
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L R+ G +P + Y +++ LCK V DA + E+V P++ TY ALI +C
Sbjct: 245 LRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCR 304
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ---IYD 554
R E +M EM P+ +I G M V++ E G F + + + D
Sbjct: 305 ASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSM---VDRNEEAYGMFREMSECGFVPD 358
Query: 555 TESYNAV 561
+Y +
Sbjct: 359 ARTYRGL 365
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 145/290 (50%), Gaps = 6/290 (2%)
Query: 312 TYTTLMNGLCKEGKVREAHQLFH---RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
T + ++ GLC+ G+V +A + F + H PD+VSY TLI CK G++ + L
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAH--AQPDVVSYTTLINGLCKLGRVDAAFDLF 69
Query: 369 YEMMG-NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+M+ G P+ FT +V G K+ RL +A ++ E ++ + Y+ L+ AL Q
Sbjct: 70 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQ 129
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R A + ++ ++GYVP+L +N ++ LC+ +ADAL + +EM+DR+ P+L T
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C + EA L+D M+ G PD L+ G+ ++ A LL
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ I D +Y V + + G + E+ + + +PN +T +I
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALI 299
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 13/212 (6%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL FN + D + P Y +++ L +++ A ++L +V + C + +
Sbjct: 171 ALEVFNEMI-DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS--EGCRPDLVAYTP 227
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L+ + G + + R+ + G P +V+ +++ L K+ +D +++
Sbjct: 228 LV-------LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIF 280
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E+ PN T++ L +C+ VD+ + + E P++VTYNT+I
Sbjct: 281 RELVANKCSPNVVTYSALIGGYCRASRVDEGG---KVMREMACRPNVVTYNTMIWGLSMV 337
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
R +A+ ++R M +PD TY L L
Sbjct: 338 DRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 91/232 (39%), Gaps = 41/232 (17%)
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSAL---NLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G+ + T II+QG + GR+ AL + +EL + Y LI LC+ R
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVS--YTTLINGLCKLGRV 62
Query: 432 FAATSLLER-IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
AA L + + G P+ YN L++ LCK D + A + E R+ P + TY
Sbjct: 63 DAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNT 122
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
L+ +GR EA++ +M E G +P L+
Sbjct: 123 LMAALFQLGRVDEALATFTQMTEEGYVP------TLV----------------------- 153
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+NA+ L+ +E+ + F PN +T +I L K
Sbjct: 154 ------SFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCK 199
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 456 LMESLCKCDSVADALLLKDEMVD-RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
+++ LC+C VA AL D ++ + +P + +Y LI C +GR A L +M+ +
Sbjct: 16 ILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAA 75
Query: 515 G-MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G P++ L++G C + ++ A A++ K+ D +YN + + G + +
Sbjct: 76 GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDE 135
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + G+ P ++ +I L +
Sbjct: 136 ALATFTQMTEEGYVPTLVSFNAIITGLCRA 165
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 184/398 (46%), Gaps = 11/398 (2%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGR-IGICP 238
Y G S + F + D G + S+ S N LLN L++ D +++ GI P
Sbjct: 130 YGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP 189
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T N+L CK D++ L++I G P+LVTY T++ Y +G + A +
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R PD TYT LM+G CK G+ EA + M + P+ V+Y +I A CKE
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
K E++++ EM+ PD+ C ++ ++ ++ A L ++ + +
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI LC++ R A L + + G +PSL YN L+ +C+ + +A L D+M +
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING---YCMEKD 535
R KP+ TY LI G E V +++EMLE G P+ +L G E+D
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEED 488
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
K ++ K D ES+ FA G+L K
Sbjct: 489 AMKIVSMAVMNGK----VDKESWELFLKKFA--GELDK 520
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 167/343 (48%), Gaps = 10/343 (2%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-----VLPDLVTYTTLMNG 319
+I + G + + NTL++ + N F L M++ + + P++ T L+
Sbjct: 145 RIPDFGVKRSVRSLNTLLNVLIQ----NQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA 200
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK+ + A+++ + GL P++V+Y T++ Y G M+ +K +L EM+ G YPD
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 260
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++ GY K GR A ++ ++++ + + Y +I ALC++ + A ++ +
Sbjct: 261 ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + ++P + +++++LC+ V +A L +M+ N P + LI C G
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA L DE E G +P LI G C + ++ +A L ++ + +YN
Sbjct: 381 RVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ +++G++ + + + + L +G PN T + L K
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 216/448 (48%), Gaps = 12/448 (2%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
K C SV + +++C + G + E+ + + + + P++ S N L++ L
Sbjct: 371 KGCIPSVIAYNCILTCLG-------RKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLC 422
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K ++ +V + M G+ PN T NI+ CK +D+ ++ + PD V
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV 482
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
T+ +LI + G++NDA+ LY M P+ V YT+L+ K G+ + H+++ M
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+HRG SPD++ N + K G++++ ++L E+ G+ PD + I++ G K G
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L E++ G+ + Y+ +I C+ + A LLE + G P++ Y +
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ L K D + +A +L +E + + ++ Y +LI F +GR EA +++E+++ G+
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFF-AKKFQIYDTE-SYNAVFNMFAEDGDLSKL 574
P++ L++ ++++ EAL+ F K + E +Y+ + N + +K
Sbjct: 723 TPNTYTWNCLLDALVKAEEID--EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKA 780
Query: 575 MELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + G PN +T MI L +
Sbjct: 781 FVFWQEMQKQGLKPNTITYTTMISGLAR 808
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 136/578 (23%), Positives = 239/578 (41%), Gaps = 88/578 (15%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
++R D AL +F WV+ + + Y ++ ++A + ++L E+
Sbjct: 105 VIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEM------ 158
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
S+ F + + ++VK +RE+F F+P+ + L+ L
Sbjct: 159 ---SMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAA 215
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ D + +M IG H F L VF + G VD L++++ F+ DLV Y
Sbjct: 216 HEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLY 275
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N I + K G+++ A+ + + + ++PD VT+T+++ LCK +V EA +LF +
Sbjct: 276 NVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDS 335
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
P + +YNT+I Y GK E+ SLL G P I+ G++G++
Sbjct: 336 NKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE 395
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
AL ++E + + + Y+ LI LC+ AA + + + + G P++ N +++
Sbjct: 396 ALR-ILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMID 454
Query: 459 SLCKC--------------------DSVA---------------DALLLKDEMVDRNIKP 483
LCK DSV DA +L ++M+D P
Sbjct: 455 RLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTP 514
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY--CMEK--DVNKA 539
+ Y +LI F GR + + EM+ G PD +L+N Y C+ K ++ K
Sbjct: 515 NAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD----LMLLNNYMDCVFKAGEIEKG 570
Query: 540 EALL-------------------------GFFAKKFQIY----------DTESYNAVFNM 564
AL GF ++++ DT +YN V +
Sbjct: 571 RALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDG 630
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F + G ++K +L + G P +T +I L K
Sbjct: 631 FCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAK 668
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 35/416 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + + K + G P+I++ N +++ L K +D+ ++ + P++
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV 482
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF L ++G V+ EK+ + G P+ V Y +LI ++ K GR D +Y+ M
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542
Query: 302 YRRNVLPDLV-----------------------------------TYTTLMNGLCKEGKV 326
R PDL+ +Y+ L++GL K G
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
++ ++LF+ M +GL D +YN +I +CK GK+ ++ LL EM G+ P T +
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ G K RL A L E + V ++ +Y LI + R A +LE + Q G
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P+ +N L+++L K + + +AL+ M + P+ TY ++ C + + +A
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EM + G+ P++ +I+G +V +A+ L F I D+ YNA+
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 146/294 (49%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G I + F + G P + S + L++GL+K ++++ EM G+ +T
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTR 622
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+NI+ FCK+G V+K LE+++ +G P +VTY ++I K RL++A+ L+
Sbjct: 623 AYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 682
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V ++V Y++L++G K G++ EA+ + ++ +GL+P+ ++N L+ A K ++
Sbjct: 683 KSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEI 742
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ M P+ T I+V G K + A E+Q+ G+ + Y +
Sbjct: 743 DEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTM 802
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
I L + A L ER G +P YN ++E L + DA +L +E
Sbjct: 803 ISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEE 856
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 188/406 (46%), Gaps = 9/406 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S +C ++ L + K + A ML E + P++V V+ LI + K
Sbjct: 479 PDSVTFCSLIDGLGRHGKVNDAY-MLYEKMLDSGQTPNAV-VYTSLIR-------NFFKC 529
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + K +++ + G P ++ N ++ + K I++ ++EE+ G+ P+ ++
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+IL H K G +++E+G D YN +I +CK G++N A+ L M
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ + P +VTY ++++GL K ++ EA+ LF + + ++V Y++LI + K G++ E
Sbjct: 650 KGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDE 709
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L E+M G+ P+T+T ++ K + AL ++ + Y ++
Sbjct: 710 AYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVN 769
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ + A + + + G P+ Y ++ L + +V +A L + P
Sbjct: 770 GLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIP 829
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ Y A+I ++ +A L +E G S+ C VL++
Sbjct: 830 DSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDA 875
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 207/426 (48%), Gaps = 3/426 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC 237
AY + G + ++ + + +++ P +++CN LL+ ++K ++ +VY+EM G C
Sbjct: 143 AYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGC 202
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
+ ++ I+ C G V++ +E +G P++V YNT+I YCK G + +A +
Sbjct: 203 VDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLV 262
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
++ + + +P L T+ T++NG CK+G + +L + RGL + N +I A +
Sbjct: 263 FKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYR 322
Query: 358 EG-KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
G K+ ++S+ + ++ N PD T I++ KEG+ A L+ E + G+ ++
Sbjct: 323 HGFKVDPAESIRW-IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNL 381
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y LI A C+ A+ LL ++ + G P + Y L+ L + DA+ +K ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+DR + P + Y L+ C GR A L EML+ +LPD+ + LI+G+ D
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF 501
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
++A + +K D +NA+ F G L + + R P+ T +
Sbjct: 502 DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 597 IHSLWK 602
I K
Sbjct: 562 IDGYVK 567
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 186/419 (44%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E K G P+IV N ++ G KL I+ V++E+ G P TF
Sbjct: 219 GKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETF 278
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + FCK GD + LE+++E G + N +I + + G D R +
Sbjct: 279 GTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVA 338
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ PD+ TY L+N LCKEGK A L +GL +SY LI AYCK +
Sbjct: 339 NDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDI 398
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL ++ G PD T I++ G G + A+N+ V+L GVS IY+ L+
Sbjct: 399 ASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
LC+ R A L + +P +Y L++ + +A + V++ +K
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKV 518
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ + A+I FC G EA++ M+ M E ++PD +I+GY ++D+ A +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + +Y ++ N F GD S E K PN +T +I S K
Sbjct: 579 RDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAK 637
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 166/390 (42%), Gaps = 35/390 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG--I 236
Y K+G I + F++ GF P++ + ++NG K ++ EE+ G +
Sbjct: 249 GYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRV 308
Query: 237 C---------------------------------PNTHTFNILTHVFCKNGDVDKVNGFL 263
C P+ T+NIL + CK G + G L
Sbjct: 309 CVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLL 368
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ ++G ++Y LI +YCK + A L + R PD+VTY L++GL
Sbjct: 369 DEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVS 428
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G + +A + +++ RG+SPD YN L+ CK G+ +K L EM+ I PD +
Sbjct: 429 GHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVY 488
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ + G A + GV + ++ +I C+ A + + R+ +
Sbjct: 489 ATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNE 548
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+ VP Y+ +++ K +A A+ + +M KP++ TY +LI FC G
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSL 608
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCME 533
A EM ++P+ LI + E
Sbjct: 609 AEETFKEMQSRDLVPNVVTYTTLIRSFAKE 638
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 182/443 (41%), Gaps = 70/443 (15%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP Y +++H L + A+ M +L++ + ++ L+S K
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLID--RGVSPDAAIYNMLMS-------GLCK 462
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + F + LD P L++G ++ D+ +V+ G+ +
Sbjct: 463 TGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVH 522
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N + FC++G +D+ + ++ EE PD TY+T+I Y K+ + A ++R M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDME 582
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++VTYT+L+NG C +G A + F M R L P++V+Y TLI ++ KE
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTL 642
Query: 363 ESKSLLYE-MMGNGIYPDTFTCQIIVQGYGKE--GRLLSALNLVVELQRFGVSISRDIYD 419
E +E MM N P+ T ++QG+ K+ GR L D ++
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLG---------------EPDGFN 687
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+ + F R+ DG+ YN ++ LC V A +L+D MV +
Sbjct: 688 H--------GQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKK 739
Query: 480 NIKPSLSTYRALICCFCGIGRSG-----------------------------------EA 504
P ++ A++ FC +G S EA
Sbjct: 740 GFSPDPVSFAAILHGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEA 799
Query: 505 VSLMDEMLESGMLPDSQICRVLI 527
+++ M+E + +ICR+ +
Sbjct: 800 STILHAMVEKADTKEPEICRISV 822
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 168/394 (42%), Gaps = 24/394 (6%)
Query: 125 TSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVG 184
T+ +Y ++ + ++ A K+L +L E + C + + LI V G
Sbjct: 379 TNLSYAPLIQAYCKSKEYDIASKLLLQLAE--RGCKPDIVTYGILIH-------GLVVSG 429
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
+ ++ K +D G P N L++GL K ++ EM I P+ + +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYA 489
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L F ++GD D+ E+G D+V +N +I +C+ G L++A M
Sbjct: 490 TLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
+++PD TY+T+++G K+ + A ++F M P++V+Y +LI +C +G +
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLA 609
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI-YDYLIV 423
+ EM + P+ T +++ + KE L EL + ++ ++ L+
Sbjct: 610 EETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 424 ALCQDN--------------RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA 469
+ + F R+ DG+ YN ++ LC V A
Sbjct: 670 GFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTA 729
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
+L+D MV + P ++ A++ FC +G S +
Sbjct: 730 CMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 157/318 (49%), Gaps = 6/318 (1%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N +L L + ++ +M R PN T+N + FC G V + ++ E
Sbjct: 120 NIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRE 175
Query: 269 EG-FDPDLVTYNTLISSYCKKGRLNDAFYLY-RIMYRRNVLPDLVTYTTLMNGLCKEGKV 326
G PD TY TLIS +CK GR+ DA ++ ++ + V P V Y L+ G C GK+
Sbjct: 176 RGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKL 235
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
A Q MV RG++ + +YN L+ A +G+ ++ ++L EM NG+ PD FT I+
Sbjct: 236 DVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNIL 295
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY KEG AL + E+ R GV + Y LI A + + L + + G
Sbjct: 296 INGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGI 355
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
P + +YN L+ S C + A + EM + I P TY LI FC +GR EA
Sbjct: 356 RPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARG 415
Query: 507 LMDEMLESGMLPDSQICR 524
L+DEM + G+ PD +C+
Sbjct: 416 LIDEMTKRGIQPDLGLCK 433
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 167/351 (47%), Gaps = 20/351 (5%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + Y ++ + A++++ E+ E P + LIS + K
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKY-TYATLIS-------GWCK 195
Query: 183 VGLIRESFKTFRKTLDVG-FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+G + ++ K F + L G PS V N L+ G +D Q E+M + G+
Sbjct: 196 IGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVA 255
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+L H +G LE+++ G PD+ TYN LI+ YCK+G A ++ M
Sbjct: 256 TYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEM 315
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R+ V VTYT+L+ ++G+V+E +LF V +G+ PD+V YN LI ++C G M
Sbjct: 316 SRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDM 375
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ + ++ EM I PD T +++G+ GRL A L+ E+ + G+
Sbjct: 376 ERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD------- 428
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD---SVADA 469
+ LC++ + A +L++ + G P Y L+E L D S ADA
Sbjct: 429 -LGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSAADA 478
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 157/321 (48%), Gaps = 6/321 (1%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
T+N ++ C G+ A L R M R P+ VTY T++ G C G+V+ A ++
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 336 MVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG-IYPDTFTCQIIVQGYGKE 393
M RG ++PD +Y TLI +CK G+M+++ + EM+ G + P ++ GY
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDR 232
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+L AL ++ + GV+++ Y+ L+ AL D R A ++LE + ++G P + Y
Sbjct: 233 GKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTY 292
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N L+ CK + AL + +EM + ++ + TY +LI F G+ E L ++
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVK 352
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ PD + LIN +C D+ +A ++ KK D +YN + F G L +
Sbjct: 353 KGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDE 412
Query: 574 LMELQKRFLRLGFAPNNLTCK 594
L + G P+ CK
Sbjct: 413 ARGLIDEMTKRGIQPDLGLCK 433
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 202/459 (44%), Gaps = 53/459 (11%)
Query: 86 LLPHLGAH-EISRVLLRCQSDS---VSALTFFNWVKND------------LEIKPTSSNY 129
+LPHL A + +LL + + ++L F+ +K+ L P++ +
Sbjct: 42 VLPHLAASPSLPHLLLTASAAARPHATSLRFYAQLKSLSVPIPVASLHPLLSSLPSAPAF 101
Query: 130 CLIVHILAW-----NNKFSFAMKMLC------ELVELVKDCPHSVDVFQDLISCTEDCNW 178
L I F+ ++ LC +EL++ P V + +
Sbjct: 102 ALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIA------ 155
Query: 179 AYVKVGLIRESFKTFRKTLDVG-FQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIG-I 236
+ G ++ + + R+ + G P + L++G K+ ++ +V++EM G +
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEV 215
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ +N L +C G +D + E + + G + TYN L+ + GR +DA+
Sbjct: 216 APSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYA 275
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
+ M R + PD+ TY L+NG CKEG ++A ++F M +G+ V+Y +LI+A+
Sbjct: 276 VLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFS 335
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
++G++QE+ L + GI PD ++ + G + A ++ E+++ +
Sbjct: 336 RKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDV 395
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C R A L++ + + G P L LCK DA L EM
Sbjct: 396 TYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEM 447
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
V + I P STY +LI E ++ +DE + +
Sbjct: 448 VGKGITPDDSTYISLI----------EGLTTVDEQMSAA 476
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 131/268 (48%), Gaps = 8/268 (2%)
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE 405
++N ++ C GK + LL +M P+ T ++ G+ GR+ +AL ++ E
Sbjct: 117 TTFNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMRE 172
Query: 406 L-QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV-PSLEIYNELMESLCKC 463
+ +R G++ + Y LI C+ R A + + + G V PS +YN L+ C
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDR 232
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ AL +++MV R + +++TY L+ GR+ +A ++++EM +G+ PD
Sbjct: 233 GKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTY 292
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
+LINGYC E + KA + ++K +Y ++ F+ G + + L K ++
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVK 352
Query: 584 LGFAPNNLTCKYMIHSLWKG--MERKFQ 609
G P+ + +I+S G MER F+
Sbjct: 353 KGIRPDVVMYNALINSHCAGGDMERAFE 380
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 216/449 (48%), Gaps = 13/449 (2%)
Query: 92 AHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
H+++ L++ + D AL FN V ++ Y I+ LA KF ++L +
Sbjct: 132 THDVAINLIKREKDPQHALKIFNMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQ 191
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLD-VGFQPSIVSCNF 210
+ + C VF +L+ Y K G + F F V +PS + +
Sbjct: 192 MT--YEACKFHEGVFINLMK-------HYSKCGFHEKVFDAFLSIQTIVREKPSPKAISS 242
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGIC-PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
LN L+ N +D ++ R + PN FNIL C+ GD+D ++++
Sbjct: 243 CLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNS 302
Query: 270 GFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLVTYTTLMNGLCKEGKVR 327
+ P+++TY+TL+ C+ GRL +AF L+ M ++ ++PD +TY L+NG C+EGK
Sbjct: 303 KYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKAD 362
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
A + M + G P++ +Y+ L+ CK GK+Q++K +L EM +G+ PD T ++
Sbjct: 363 RARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLI 422
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
+ + G++ A+ L+ E++ ++ ++ LC++ R A ++E++ Q G
Sbjct: 423 NFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVY 482
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+ Y ++ SL + + A L M+ R P +T L+ C G + +A +
Sbjct: 483 LNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATA 542
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ ++++ G P +LI+ C ++ +
Sbjct: 543 LFDLVDMGFQPQHDSWELLIDLICRDRKL 571
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 23/384 (5%)
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG---RL 291
G N T+ + + V+ L ++ E + L+ Y K G ++
Sbjct: 161 GFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSKCGFHEKV 220
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYN 349
DAF + + R P ++ + +N L +V +L R L P++ +N
Sbjct: 221 FDAFLSIQTIVREKPSPKAIS--SCLNLLVDSNQVDLVRKLL-LYAKRSLVYKPNVCIFN 277
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
L+ +C+ G + + ++ EM + YP+ T ++ G + GRL A L E+
Sbjct: 278 ILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEM-- 335
Query: 409 FGVSISRD-------IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+S+D Y+ LI C++ + A +++E + +G P++ Y+ L++ LC
Sbjct: 336 ----VSKDQIVPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLC 391
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + DA + EM +KP TY +LI F G+ EA+ L+ EM E+ D+
Sbjct: 392 KAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTV 451
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
V++ G C E ++A ++ ++ + SY V N ++ +L K +L
Sbjct: 452 TFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLM 511
Query: 582 LRLGFAPNNLTCKYMIHSLWK-GM 604
L GF P+ T ++ L K GM
Sbjct: 512 LSRGFVPHYATSNELLVRLCKEGM 535
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 199/424 (46%), Gaps = 28/424 (6%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
S+ S N + GL++ + + + EM I PN +++NIL H CK G L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ E G PD VTY+TL+ YC++G++ +A Y+ R M + P++ T L++ L KE
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE------------SKSL---- 367
G+ EA L M RG D V+ NT+I CK G + + S SL
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLG 509
Query: 368 -----LYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD--IY 418
L+++ NG PD+ T I+ G K GR+ A ++E+ G +S D I+
Sbjct: 510 NSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEM--IGKKLSPDSLIF 567
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D I C+ + +A +L+ + + G SL YN L++ L + + + L DEM +
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKE 627
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I P++ TY +I C G+ +A L+DEML+ G+ P+ R+LI + D
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGA 687
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ L A + Y+ +FN G+ K EL + L A N + +I
Sbjct: 688 AQELFE-IALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIE 746
Query: 599 SLWK 602
L K
Sbjct: 747 KLCK 750
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 194/401 (48%), Gaps = 7/401 (1%)
Query: 183 VGLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+GL+ + FR D P I N L LK + +D +Y++M + P T
Sbjct: 94 LGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQT 153
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+TFN+L C+ G ++ +K+ E+G P+ + L+ YC+ G + L
Sbjct: 154 YTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE 213
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M LP+ V Y T+++ LC EG+ EA +L +M GLSPDIV++N I A CK G+
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273
Query: 361 MQESKSLLYEMMGN---GI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ E+ + +M + G+ P+T T ++++G+ EG + + + + ++S
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEG-MFEEARAIFDSMKNSETLSLR 332
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ ++ L + + A +L + + P+L YN L+ LCK +DA + M
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + P TY L+ +C G+ EA ++ EM++ G P+ C +L++ E
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
++AE LL ++ D + N + N + G+L K +E+
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEI 493
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 211/462 (45%), Gaps = 57/462 (12%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E+ + + +P++ S N L++GL K + M G+ P+T
Sbjct: 342 VRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDT 401
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T++ L H +C+ G + + N L ++ + G P++ T N L+ S K+GR ++A L ++
Sbjct: 402 VTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM 461
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------ 342
M R D VT T++NGLCK G + +A ++ M RG +
Sbjct: 462 MNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNN 521
Query: 343 -----PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
PD ++Y T+I CK G++ E+K L EM+G + PD+ + Y K+G+L
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
SA ++ E+++ G + S Y+ LI L +N+ F L++ + + G P++ YN ++
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF---CGIGRSGE----AVSL--- 507
L + + DA L DEM+ + I P++ T+R LI F C G + E A+SL
Sbjct: 642 SCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGH 701
Query: 508 --------MDEMLESGMLPDSQ----------------ICRVLINGYCMEKDVNKAEALL 543
+E+L G ++ + R LI C + ++ A +L
Sbjct: 702 KESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFIL 761
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
K +D S+ V + + G E +R + +
Sbjct: 762 HKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMA 803
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 204/490 (41%), Gaps = 61/490 (12%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++G + + + F K + G +P+ S L+ G + + +EM G P
Sbjct: 162 ALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALP 221
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +N + C G + +EK+ E G PD+VT+N I++ CK G++ +A ++
Sbjct: 222 NRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIF 281
Query: 299 RIMYRRNVL----PDLVTYTTLMNGLCKEG------------------------------ 324
R M + P+ VTY ++ G C EG
Sbjct: 282 RDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGL 341
Query: 325 ----KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K+ EAH + + M + + P++ SYN L+ CK G +++S+L M +G+ PDT
Sbjct: 342 VRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDT 401
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ GY + G++L A ++ E+ + G + + L+ +L ++ R A LL+
Sbjct: 402 VTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM 461
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK------------------ 482
+ + GY N ++ LCK ++ A+ + M R
Sbjct: 462 MNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNN 521
Query: 483 -----PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P TY +I C +GR EA + EM+ + PDS I I YC + ++
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A +L KK +YN++ + + ++ L G PN T +I
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 598 HSLWKGMERK 607
L +G + K
Sbjct: 642 SCLSEGGKLK 651
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 43/420 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + Y ++H K A +L E+++ V F ++ +C + +
Sbjct: 397 VAPDTVTYSTLLHGYCRRGKILEANYVLREMIQ--------VGCFPNMYTCNILLHSLW- 447
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--------GR 233
K G E+ + + G+ V+CN ++NGL K +D+ ++ M G
Sbjct: 448 KEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGN 507
Query: 234 IG---------------ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+G P++ T+ + CK G VD+ L ++ + PD + +
Sbjct: 508 LGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIF 567
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+T I +YCK+G+L+ AF + + M ++ L TY +L+ GL E ++ E + L M
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKE 627
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ P++ +YN +I + GK++++ LL EM+ GI P+ +T +I++ G
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI------GAFFK 681
Query: 399 ALNLVVELQRFGVSIS-----RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
A + + F +++S +Y ++ L A L E +Y
Sbjct: 682 ACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLY 741
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+L+E LCK + DA + +M+D+ +++ +I G A + M+E
Sbjct: 742 RDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 36/349 (10%)
Query: 46 NPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSD 105
N + N L + N +K ++++ +G + L L N
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGN------------------------ 510
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
S + F+ N + P S Y I+ L + A K L E++ K P S+ +
Sbjct: 511 --SFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG-KKLSPDSL-I 566
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F I + Y K G + +F+ ++ G S+ + N L+ GL N I + +
Sbjct: 567 FDTFI-------YNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIY 619
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ +EM GI PN +T+N + + G + L+++ ++G P++ T+ LI ++
Sbjct: 620 GLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAF 679
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K A L+ I + + Y+ + N L G+ +A +LF + R L+
Sbjct: 680 FKACDFGAAQELFEIALSLCGHKESL-YSFMFNELLAGGETLKAKELFEAALDRSLALKN 738
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
Y LI CK+GK+ ++ +L++MM D + ++ GK G
Sbjct: 739 FLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 214/465 (46%), Gaps = 29/465 (6%)
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNG 214
+++ C S +F L+ AY G ++K +K + G P V N L+
Sbjct: 364 MMEGCYPSPKIFNSLVH-------AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 215 LL----KLNC--IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+ LNC +D + Y EM G+ N + T C G +K + ++
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+GF PD TY+ +++ C ++ AF L+ M R ++ D+ TYT +++ CK G + +
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A + F+ M G +P++V+Y LI AY K K+ + L M+ G P+ T ++
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 389 GYGKEGRLLSALNLVVEL-------------QRFGVSISRD---IYDYLIVALCQDNRPF 432
G+ K G++ A + + +++ + R Y L+ C+ +R
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A LL+ + +G P+ +Y+ L++ LCK + +A +K EM + +L TY +LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ + R A ++ +MLE+ P+ I +I+G C ++A L+ +K
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ +Y A+ + F G + +EL +R G APN +T + +I
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 241/518 (46%), Gaps = 34/518 (6%)
Query: 50 NFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV-S 108
F+P+T +K+++ +C++ K + L + L+ + + I V C++ +
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI-MVDSFCKAGLIEQ 536
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A +FN ++ ++ P Y ++H K S+A ++ + L + C ++ +
Sbjct: 537 ARKWFNEMR-EVGCTPNVVTYTALIHAYLKAKKVSYANELFETM--LSEGCLPNIVTYSA 593
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKT--------LDVGFQ--------PSIVSCNFLL 212
LI + K G + ++ + F + +D+ F+ P++V+ LL
Sbjct: 594 LID-------GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+G K + +++ ++ + M G PN ++ L CK G +D+ ++ E GF
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
L TY++LI Y K R + A + M + P++V YT +++GLCK GK EA++L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
M +G P++V+Y +I + GK++ LL M G+ P+ T ++++ K
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT-SLLERIGQDGYVPSLE 451
G L A NL+ E+++ Y +I N+ F + LL+ IGQD P L
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF---NKEFIESLGLLDEIGQDDTAPFLS 883
Query: 452 IYNELMESLCKCDSVADALLLKDEMV--DRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+Y L+++L K + AL L +E+ + STY +LI C + A L
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
EM + G++P+ Q LI G +++A LL F +
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFIS 981
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 211/489 (43%), Gaps = 20/489 (4%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
+LR + + ++FF W + K T+ Y +V ++ ++ K+ E ++ ++D
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDD----EKVPEEFLQQIRD 193
Query: 159 CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
+VF + ++ + + G + + + D F+PS + N L+ LK
Sbjct: 194 --DDKEVFGEFLNVLV---RKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKA 248
Query: 219 NCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+ +D ++ EM + + T + CK G K L +E E F PD V Y
Sbjct: 249 DRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG---KWREALTLVETENFVPDTVFY 305
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
LIS C+ +A M + LP++VTY+TL+ G + ++ ++ + M+
Sbjct: 306 TKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMM 365
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
G P +N+L+ AYC G + LL +M+ G P I++ + L+
Sbjct: 366 EGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Query: 399 ------ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL-ERIGQDGYVPSLE 451
A E+ GV +++ LC + A S++ E IGQ G++P
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ-GFIPDTS 484
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
Y++++ LC + A LL +EM + + TY ++ FC G +A +EM
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
E G P+ LI+ Y K V+ A L + + + +Y+A+ + + G +
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 572 SKLMELQKR 580
K ++ +R
Sbjct: 605 EKACQIFER 613
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 15/370 (4%)
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N+L C+NG L ++++ F P TYN LI ++ K RL+ A ++R M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
N+ D T LCK GK REA L PD V Y LI C+ +
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFE 319
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQG---YGKEGRLLSALNLVVELQRFGVSISRDIYD 419
E+ L M P+ T ++ G + GR LN+ + G S I++
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNM---MMMEGCYPSPKIFN 376
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC------KCDSVADALLLK 473
L+ A C A LL+++ + G++P +YN L+ S+C CD + A
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAY 436
Query: 474 DEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCME 533
EM+ + + + C C G+ +A S++ EM+ G +PD+ ++N C
Sbjct: 437 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 534 KDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
+ A L + + D +Y + + F + G + + + +G PN +T
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 594 KYMIHSLWKG 603
+IH+ K
Sbjct: 557 TALIHAYLKA 566
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV----TYNTLISS 284
+E+G+ P + +L K ++ LE++ F LV TYN+LI S
Sbjct: 871 DEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLIES 928
Query: 285 YCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
C ++ AF L+ M ++ V+P++ ++ +L+ GL + K+ EA L + H
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 193/406 (47%), Gaps = 11/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC--TEDCN--- 177
+ T +YC ++H L + A K L ++V K + VF ++ T+ +
Sbjct: 10 RHTLQSYCTMIHFLCTHQMLPEA-KTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYV 68
Query: 178 -----WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
AY++ G +R++ + +R + F+ +C +L L+KL W YEE
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
G + + FNIL H F K G++ + I + P +V++NTL++ Y K G L+
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLD 188
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLI 352
+ F L M V D+ TY+ L+NGLCK K+ +A++LF M+ GL P+ V++ TLI
Sbjct: 189 EGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
+CK ++ + + +M+ + PD T ++ G K+G L A +L+ E+ G+
Sbjct: 249 DGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLK 308
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ Y LI C++ A +R+ ++ Y L+ LC+ DA +
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKM 368
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
EM+ +KP + TY +I FC G + L+ EM G +P
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMP 414
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 148/272 (54%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
++VK G IR + F +PS+VS N L+NG +KL +D+ +++ M G+
Sbjct: 145 SFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQS 204
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +T+++L + CK +D N +++ + G P+ VT+ TLI +CK R++ A +Y
Sbjct: 205 DVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIY 264
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M +++ PDL+TY TL+ GLCK+G +++A L M +GL PD ++Y TLI CKE
Sbjct: 265 KQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKE 324
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + M+ I D ++ G +EGR + A ++ E+ G+ Y
Sbjct: 325 GDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTY 384
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
+I C+ + LL+ + +DGY+PS+
Sbjct: 385 TMIINEFCEKGDVWTGLKLLKEMQRDGYMPSV 416
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 105/190 (55%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + LD G P+ V+ L++G K +D ++Y++M + P+ T+N L + CK
Sbjct: 229 FDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
GD+ + ++++ +G PD +TY TLI CK+G L AF + M + N+ D V
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
YT L++GLC+EG+ +A ++ M+ GL P+I +Y +I +C++G + LL EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQ 408
Query: 373 GNGIYPDTFT 382
+G P T
Sbjct: 409 RDGYMPSVVT 418
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 156/364 (42%), Gaps = 7/364 (1%)
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
V + G F +E +G D+ ++ LI++Y + G L DA YR++
Sbjct: 39 VVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLIKEHKFR 98
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
T ++ L K + + + G + +N L+ ++ KEG+++ ++S+
Sbjct: 99 VPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSV 158
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
+ + P + ++ GY K G L L +Q GV Y LI LC+
Sbjct: 159 FDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCK 218
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
++ A L + + +G VP+ + L++ CK V A+ + +M+ +++ P L T
Sbjct: 219 ASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLIT 278
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G +A L+DEM G+ PD LI+G C E D+ A
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS------LW 601
K+ D +Y A+ + ++G ++ + L +G P T +I+ +W
Sbjct: 339 KENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVW 398
Query: 602 KGME 605
G++
Sbjct: 399 TGLK 402
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 189/385 (49%), Gaps = 41/385 (10%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
+ G P + N L+ L + N +D +++++M G PN T IL FC+ G
Sbjct: 143 IQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRT 202
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ F++ + G + + V YNTL+SS+CK+ ++A L M + +LPD+VT+ +
Sbjct: 203 KQALEFVDG--KMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSR 260
Query: 317 MNGLCKEGKVREAHQLFHRMVHRG----LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
++ LC+ GKV EA ++F M G P++V++N ++ +C+EG M+E++SL+ M
Sbjct: 261 ISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMK 320
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G + +S + Y+ ++ L ++ +
Sbjct: 321 KGGNF-----------------------------------VSLESYNTWLLGLLRNGKLL 345
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
S+L+ + ++G P++ YN +M+ LC+ + DA L D MV + P TY L+
Sbjct: 346 EGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLL 405
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+C G+ EA ++++EM+ G P++ C L+N E ++AE +L +K
Sbjct: 406 HGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQ 465
Query: 553 YDTESYNAVFNMFAEDGDLSKLMEL 577
DT + N V N +G+L K E+
Sbjct: 466 LDTVTCNIVVNGLCRNGELEKASEV 490
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 216/486 (44%), Gaps = 63/486 (12%)
Query: 179 AYVKVGLIRESFKTFRKTL---DVGF-QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
A + G + E+ + FR ++G +P++V+ N +L G + +++ + E M +
Sbjct: 263 ALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKG 322
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G + ++N +NG + + L+++ E G +P++ +YN ++ C+ + DA
Sbjct: 323 GNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDA 382
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L +M V PD VTYTTL++G C +GKV EA + + M+ +G P+ + NTL+ +
Sbjct: 383 RRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNS 442
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGV--- 411
KEG+ E++ +L +M DT TC I+V G + G L A +V E+ G
Sbjct: 443 LWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSL 502
Query: 412 --------------SISRDI-----YDYLIVALC-------------------------- 426
++S ++ Y LI LC
Sbjct: 503 GKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVT 562
Query: 427 ---------QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
+ + +A +L+ + ++G +L+ YN L+ L + + L DEM
Sbjct: 563 YDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMR 622
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML-PDSQICRVLINGYCMEKDV 536
+R I P + TY +I C C G++ +A SL+ EML+ G++ P+ ++LI +C D
Sbjct: 623 ERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDF 682
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
A L A + Y+ +FN G LS EL + L N + +
Sbjct: 683 KVACELFD-VALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDL 741
Query: 597 IHSLWK 602
I L K
Sbjct: 742 IDKLCK 747
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 186/433 (42%), Gaps = 74/433 (17%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + Y ++H K A +L E++ K C + L++ W
Sbjct: 394 VYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR--KGCHPNTYTCNTLLNSL----W--- 444
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI----- 236
K G E+ + +K + +Q V+CN ++NGL + +++ +V EM G
Sbjct: 445 KEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGK 504
Query: 237 -----------------CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
P+ T+ L + CK G +++ ++ + PD VTY+
Sbjct: 505 ENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYD 564
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
T + ++CK+G+++ A + + M R L TY +L+ GL +G++ E + L M R
Sbjct: 565 TFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRER 624
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEG---- 394
G+ PDI +YN +I C+ GK +++ SLL+EM+ G+ P+ + +I+++ + K G
Sbjct: 625 GIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKV 684
Query: 395 ------------------------RLLSALNLVVELQRFGVSISRDI------YDYLIVA 424
LL+ L + F S+ R + Y+ LI
Sbjct: 685 ACELFDVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDK 744
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADA--------LLLKDEM 476
LC+D R A LL+++ GY + +++ L K + A L L+D+
Sbjct: 745 LCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALEDKT 804
Query: 477 VDRNIKPSLSTYR 489
DR + S +R
Sbjct: 805 SDRTYRNGNSIFR 817
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 199/405 (49%), Gaps = 15/405 (3%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWAYVKVGL 185
Y +++H L + A ++ ++V+ LV D V V+ LI + +VG
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD----VSVYNSLIK-------GFCEVGR 349
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGIC-PNTHTFN 244
E++K + T G + I + N + GLL + + ++ +++ C P+ TF
Sbjct: 350 TGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFG 408
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
L H C+NG ++ LE G + D+ +Y+++I+ +CK GR +DA +Y+ M +
Sbjct: 409 TLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKD 468
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
P+ Y L+NG C+ K+ +A +++ M G P I++YNTLI CK K QE+
Sbjct: 469 GCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEA 528
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
SL EM+ G PD T +++G ++ ++ AL + E+ G+ + +++ LI
Sbjct: 529 SSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHG 588
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
LC + A + + + P+L YN LM+ + S+ A L ++D +KP
Sbjct: 589 LCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPD 648
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ TY I C R+ E V L++E+L +G++P +L+
Sbjct: 649 IVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRA 693
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 238/519 (45%), Gaps = 13/519 (2%)
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
+ + P+L + I L + D A++ F+ ++ + P Y ++ LA +++
Sbjct: 152 RRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRR-GVAPDRVTYSTLMSGLAKHDQLD 210
Query: 144 FAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTL-DVGFQ 202
A+ +L E+ + V D + C + G+ ++ K + + + D G
Sbjct: 211 NALDLLDEM--------PNYGVQADAV-CYNALLSGCFRTGMFEKAMKVWEQLVRDPGAS 261
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++ + +L+GL KL + +V+ M +T T+ IL H C++GDVD
Sbjct: 262 PNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARV 321
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+ + G D+ YN+LI +C+ GR +A+ + + + TY + GL
Sbjct: 322 YSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLD 380
Query: 323 EGKVREAHQLFHRMVHRG-LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
G V EA +L ++ + SPD V++ TLI C+ G + +L + +G D F
Sbjct: 381 SGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVF 440
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
+ ++ + K+GR A + + + G + +Y+ LI C+ ++ A + +
Sbjct: 441 SYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEM 500
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
+G P++ YN L++ LCK + +A L EM++R KP + TY +LI C +
Sbjct: 501 TSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKV 560
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
A+ + DE+L++G+ D + +LI+G C V++A + +K + +YN +
Sbjct: 561 DVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTL 620
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ F E G + K L L G P+ +T I L
Sbjct: 621 MDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGL 659
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 2/351 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G + + + + + G + N L+ G ++ + W+ ++ G GI T
Sbjct: 311 RSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT- 369
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGF-DPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+NI+T +G V + L+++E + PD VT+ TLI C+ G N AF +
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
D+ +Y++++N CK+G+ +A++++ MV G P+ YN LI +C+ K
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ ++ + EM NG P T ++ G K + A +L E+ G Y
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+D + A + + I G + ++N L+ LC V +A + EM ++N
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
P+L TY L+ F IG +A SL +L++G+ PD I G C
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLC 660
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 159/363 (43%), Gaps = 7/363 (1%)
Query: 234 IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD----PDLVTYNTLISSYCKKG 289
+G P + N L F + + F + F P+L TYN ++ S C +G
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
++ A L+ + RR V PD VTY+TLM+GL K ++ A L M + G+ D V YN
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYN 232
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
L+ + G +++ + +++ + G P+ T ++++ G K GR A + +
Sbjct: 233 ALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMA 292
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVAD 468
Y LI LC+ +A + + + G V + +YN L++ C+ +
Sbjct: 293 NNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGE 352
Query: 469 ALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML-ESGMLPDSQICRVLI 527
A D I+ ++TY + G EA L+ ++ ++ PD LI
Sbjct: 353 AWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C N+A +L + D SY+++ N F +DG E+ K ++ G
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471
Query: 588 PNN 590
PN+
Sbjct: 472 PNS 474
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 139/321 (43%), Gaps = 44/321 (13%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A ++ND P + ++H L N + A E++E ++ +DVF
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAF----EILEDARNSGEELDVFSY 442
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
C K G ++ + ++ + G +P+ N L+NG +++ I+ ++Y
Sbjct: 443 SSMINRFC-----KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIY 497
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY---------- 278
EM G CP T+N L CK + + +++ E GF PD+ TY
Sbjct: 498 IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557
Query: 279 -------------------------NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
N LI C G++++AF +Y M +N P+LVTY
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
TLM+G + G + +A L+ ++ GL PDIV+YNT I C + E LL E++
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677
Query: 374 NGIYPDTFTCQIIVQGYGKEG 394
GI P T I+V+ K G
Sbjct: 678 TGIMPTVITWSILVRAVIKYG 698
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G +F+ + G + + S + ++N K +VY+ M + G PN+H +
Sbjct: 418 GYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVY 477
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FC+ ++ ++ G P ++TYNTLI CK + +A L + M
Sbjct: 478 NALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLE 537
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R PD+ TY +L+ GLC++ KV A +++ ++ GL D++ +N LI C GK+ E
Sbjct: 538 RGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDE 597
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ + EM P+ T ++ G+ + G + A +L + G+ Y+ I
Sbjct: 598 AFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIK 657
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
LC NR LL + G +P++ ++ L+ ++ K
Sbjct: 658 GLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 118/240 (49%), Gaps = 9/240 (3%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP S Y +++ +K + A+K+ E+ C ++ + LI K
Sbjct: 471 KPNSHVYNALINGFCRVSKINDAIKIYIEMTS--NGCCPTIITYNTLID-------GLCK 521
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+E+ ++ L+ GF+P I + L+ GL + +D ++++E+ G+ +
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV 581
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
NIL H C G VD+ +++E+ P+LVTYNTL+ + + G ++ A L+ +
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL 641
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD+VTY T + GLC + E L + ++ G+ P +++++ L+ A K G +Q
Sbjct: 642 DNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 196/414 (47%), Gaps = 4/414 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G + E+ + FR+ QP + + L+ GL ++ + ++M +G P
Sbjct: 208 GFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRP 263
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
T + L ++C+ ++ L ++ + G P VT ++++YC++GR++ A ++
Sbjct: 264 ATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVF 323
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P++ TY ++ G C GKV +A L +M G+ PD+V+YN LI C +
Sbjct: 324 ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G ++ + LL M GNG+ D +T +++ K G++ A +L L+ G+ + +
Sbjct: 384 GHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I LC+ + A + LE++ G P Y+ +E+LCK + L DEM+
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ 503
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KPS Y +I G A + +M+ G PD + YC E +++
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
AE ++ K I D +YN + + G + + K + PN+ T
Sbjct: 564 AENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFT 617
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 179/406 (44%), Gaps = 6/406 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P+ + N L+ L + + + M R G P+ TFN L +C+ +D
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+K+ GF D V+Y LI +C+ GR+++A L+R + + PD+ T+ L+ GLC
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ E + +M G P +Y L+ +C+E K +E++ +L EM NG+ P T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
C +V Y +EGR+ A+ + ++ G + Y+ ++ C + + A +LL+++
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + YN L+ C + A L M + TY LI C G+
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA SL D + G+ P+S +ING C + A L DT +Y+
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ + + L+ P+ + +I L+K ER +
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFK--ERNY 526
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 4/393 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G++P + N L+ G + +D ++++M G + ++ L FC+ G VD+
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA 218
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++E+ PD+ T+ L+ C R + Y+ + M P Y L++
Sbjct: 219 LELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+E K EA ++ + M GL P V+ ++ AYC+EG+M + + M G P+
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPN 334
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+T +VQG+ G++ A+ L+ +++ GV Y+ LI C D +A LL
Sbjct: 335 VWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLR 394
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ +G YN L+++LCK V +A L D + R I+P+ T+ +I C G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGG 454
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ A + +++M+ +G PD+ I C K + + + +K T +Y
Sbjct: 455 KFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYT 514
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
V + ++ + + + + LG +P+ +T
Sbjct: 515 IVIDRLFKERNYGLATRIWGQMVSLGCSPDVVT 547
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 183/391 (46%), Gaps = 22/391 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F+ R G + N L++ L K +D+ +++ + GI PN+ TF
Sbjct: 384 GHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CK G D FLEK+ G PD TY+ I + CK + M +
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ 503
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++V P V YT +++ L KE A +++ +MV G SPD+V+Y T + AYC EG++ E
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+++++ EM GI D ++ G+ G+ A+ ++ + GV+ + + + I+
Sbjct: 564 AENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT--GVASMPNHFTFFIL 621
Query: 424 ALC------QDNRPFAATS------------LLERIGQDGYVPSLEIYNELMESLCKCDS 465
++ P TS L E + ++ S Y ++E +
Sbjct: 622 LRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERR 681
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
+ + L M + ++ + Y +L+ CFC + +A +L+ M+ G LP+ +
Sbjct: 682 LDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQY 741
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
L++G+ E ++A+ + F +++ Y+T+
Sbjct: 742 LLSGFTAEGQADRAKEI--FRGLRWKEYNTD 770
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 122/537 (22%), Positives = 216/537 (40%), Gaps = 66/537 (12%)
Query: 118 NDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN 177
+L +P + Y +V + K A KML E+ + L+ C C
Sbjct: 257 KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFD------------NGLVPCAVTCT 304
Query: 178 W---AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
AY + G + + + F G +P++ + N ++ G + + + + ++M
Sbjct: 305 AVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMREC 364
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
G+ P+ T+N+L C +G ++ L +E G D TYN LI + CK G++++A
Sbjct: 365 GVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEA 424
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L+ + R + P+ VT+ T++NGLCK GK A +MV G +PD +Y+ I
Sbjct: 425 CSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIEN 484
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQII---------------------------- 386
CK +E S + EM+ + P T I+
Sbjct: 485 LCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544
Query: 387 -------VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
V+ Y EGRL A N+V+E+++ G+ + Y+ LI + A ++L+
Sbjct: 545 VVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILK 604
Query: 440 RIGQDGYVPS----------------LEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
+ +P+ E S+ K +AD L + M ++
Sbjct: 605 HMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPS 664
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
S Y A++ F R E SL+ M E + + I L+N +C + A ALL
Sbjct: 665 SARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALL 724
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + SY + + F +G + E+ + + + + K +I L
Sbjct: 725 CSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGL 781
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 331 QLFHRMVHRGL-SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+LF M H G +P +YN LI A C+ ++ ++ L M+ +G PD FT ++ G
Sbjct: 114 RLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y + +L A +L ++ G S Y LI C+ R A L + Q P
Sbjct: 174 YCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PD 229
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ + L++ LC + L + +M + +P+ Y AL+ +C ++ EA +++
Sbjct: 230 MYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLN 289
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
EM ++G++P + C ++N YC E ++ A + K + +YNA+ F G
Sbjct: 290 EMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVG 349
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ K M L + G P+ +T +I
Sbjct: 350 KVYKAMALLDQMRECGVEPDVVTYNLLIRG 379
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/390 (18%), Positives = 140/390 (35%), Gaps = 60/390 (15%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I+P S + +++ L KF A L ++V C + I
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS--AGCAPDTYTYSPFIE-------NLC 486
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K RE + L +PS V+ +++ L K +++ +M +G P+
Sbjct: 487 KTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVV 546
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGR----------- 290
T+ +C G + + + ++++ G D + YNTLI + G+
Sbjct: 547 TYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606
Query: 291 ----------------------------------------LNDAFYLYRIMYRRNVLPDL 310
L D F L+ +M + +V
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSA 666
Query: 311 VTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYE 370
Y ++ G +E ++ E L M L + Y +L+ +CK ++ +LL
Sbjct: 667 RAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCS 726
Query: 371 MMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNR 430
M+G+G P+ + Q ++ G+ EG+ A + L+ + ++ +I L +
Sbjct: 727 MIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGH 786
Query: 431 PFAATSLLERIGQDGYVPSLEIYNELMESL 460
P ++ + Q PS E Y L E L
Sbjct: 787 PDMCHDMISILEQMKCKPSDETYAMLTEEL 816
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 199/424 (46%), Gaps = 28/424 (6%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
S+ S N + GL++ + + + EM I PN +++NIL H CK G L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
+ E G PD VTY+TL+ YC++G++ +A Y+ R M + P++ T L++ L KE
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE------------SKSL---- 367
G+ EA L M RG D V+ NT+I CK G + + S SL
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLG 509
Query: 368 -----LYEMMGNG--IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD--IY 418
L+++ NG PD+ T I+ G K GR+ A ++E+ G +S D I+
Sbjct: 510 NSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEM--IGKKLSPDSLIF 567
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
D I C+ + +A +L+ + + G SL YN L++ L + + + L DEM +
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKE 627
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
R I P++ TY +I C G+ +A L+DEML+ G+ P+ R+LI + D
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGA 687
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A+ L A + Y+ +FN G+ K EL + L A N + +I
Sbjct: 688 AQELFE-IALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIE 746
Query: 599 SLWK 602
L K
Sbjct: 747 KLCK 750
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 194/401 (48%), Gaps = 7/401 (1%)
Query: 183 VGLIRESFKTFRKTLDVGFQ--PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+GL+ + FR D P I N L LK + +D +Y++M + P T
Sbjct: 94 LGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQT 153
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
+TFN+L C+ G ++ +K+ E+G P+ + L+ YC+ G + L
Sbjct: 154 YTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDE 213
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M LP+ V Y T+++ LC EG+ EA +L +M GLSPDIV++N I A CK G+
Sbjct: 214 MRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQ 273
Query: 361 MQESKSLLYEMMGN---GI-YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
+ E+ + +M + G+ P+T T ++++G+ EG + + + + ++S
Sbjct: 274 ILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEG-MFEEARAIFDSMKNSETLSLR 332
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ ++ L + + A +L + + P+L YN L+ LCK +DA + M
Sbjct: 333 SYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM 392
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + P TY L+ +C G+ EA ++ EM++ G P+ C +L++ E
Sbjct: 393 RESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRA 452
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
++AE LL ++ D + N + N + G+L K +E+
Sbjct: 453 SEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEI 493
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 211/462 (45%), Gaps = 57/462 (12%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E+ + + +P++ S N L++GL K + M G+ P+T
Sbjct: 342 VRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDT 401
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T++ L H +C+ G + + N L ++ + G P++ T N L+ S K+GR ++A L ++
Sbjct: 402 VTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM 461
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS------------------ 342
M R D VT T++NGLCK G + +A ++ M RG +
Sbjct: 462 MNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNN 521
Query: 343 -----PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
PD ++Y T+I CK G++ E+K L EM+G + PD+ + Y K+G+L
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
SA ++ E+++ G + S Y+ LI L +N+ F L++ + + G P++ YN ++
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF---CGIGRSGE----AVSL--- 507
L + + DA L DEM+ + I P++ T+R LI F C G + E A+SL
Sbjct: 642 SCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGH 701
Query: 508 --------MDEMLESGMLPDSQ----------------ICRVLINGYCMEKDVNKAEALL 543
+E+L G ++ + R LI C + ++ A +L
Sbjct: 702 KESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFIL 761
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
K +D S+ V + + G E +R + +
Sbjct: 762 HKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMMEMA 803
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 204/490 (41%), Gaps = 61/490 (12%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A ++G + + + F K + G +P+ S L+ G + + +EM G P
Sbjct: 162 ALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALP 221
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N +N + C G + +EK+ E G PD+VT+N I++ CK G++ +A ++
Sbjct: 222 NRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIF 281
Query: 299 RIMYRRNVL----PDLVTYTTLMNGLCKEG------------------------------ 324
R M + P+ VTY ++ G C EG
Sbjct: 282 RDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGL 341
Query: 325 ----KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
K+ EAH + + M + + P++ SYN L+ CK G +++S+L M +G+ PDT
Sbjct: 342 VRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDT 401
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ GY + G++L A ++ E+ + G + + L+ +L ++ R A LL+
Sbjct: 402 VTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQM 461
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK------------------ 482
+ + GY N ++ LCK ++ A+ + M R
Sbjct: 462 MNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNN 521
Query: 483 -----PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
P TY +I C +GR EA + EM+ + PDS I I YC + ++
Sbjct: 522 GKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLS 581
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
A +L KK +YN++ + + ++ L G PN T +I
Sbjct: 582 SAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 598 HSLWKGMERK 607
L +G + K
Sbjct: 642 SCLSEGGKLK 651
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 43/420 (10%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
+ P + Y ++H K A +L E+++ V F ++ +C + +
Sbjct: 397 VAPDTVTYSTLLHGYCRRGKILEANYVLREMIQ--------VGCFPNMYTCNILLHSLW- 447
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--------GR 233
K G E+ + + G+ V+CN ++NGL K +D+ ++ M G
Sbjct: 448 KEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGN 507
Query: 234 IG---------------ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+G P++ T+ + CK G VD+ L ++ + PD + +
Sbjct: 508 LGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIF 567
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
+T I +YCK+G+L+ AF + + M ++ L TY +L+ GL E ++ E + L M
Sbjct: 568 DTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKE 627
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
RG+ P++ +YN +I + GK++++ LL EM+ GI P+ +T +I++ G
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILI------GAFFK 681
Query: 399 ALNLVVELQRFGVSIS-----RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
A + + F +++S +Y ++ L A L E +Y
Sbjct: 682 ACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLY 741
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
+L+E LCK + DA + +M+D+ +++ +I G A + M+E
Sbjct: 742 RDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADEFAERMME 801
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 36/349 (10%)
Query: 46 NPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSD 105
N + N L + N +K ++++ +G + L L N
Sbjct: 475 NTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGN------------------------ 510
Query: 106 SVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV 165
S + F+ N + P S Y I+ L + A K L E++ K P S+ +
Sbjct: 511 --SFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIG-KKLSPDSL-I 566
Query: 166 FQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCW 225
F I + Y K G + +F+ ++ G S+ + N L+ GL N I + +
Sbjct: 567 FDTFI-------YNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIY 619
Query: 226 QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ +EM GI PN +T+N + + G + L+++ ++G P++ T+ LI ++
Sbjct: 620 GLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAF 679
Query: 286 CKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI 345
K A L+ I + + Y+ + N L G+ +A +LF + R L+
Sbjct: 680 FKACDFGAAQELFEIALSLCGHKESL-YSFMFNELLAGGETLKAKELFEAALDRSLALKN 738
Query: 346 VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
Y LI CK+GK+ ++ +L++MM D + ++ GK G
Sbjct: 739 FLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRG 787
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 215/469 (45%), Gaps = 36/469 (7%)
Query: 162 SVDVFQDLISCTEDCNWA----------YVKVGLIRESFKTFRKTLD---VGFQPSIVSC 208
+VD+F D ++C +C ++ GL + + + + V P++++
Sbjct: 144 AVDLF-DRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTF 202
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N ++ + K+ +D QV+ +M P+ +T+ L CK +D+ L++++
Sbjct: 203 NLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQI 262
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVRE 328
+G P VT+N LI+ CKKG L+ A L M+ + +P+ VTY TL++GLC +GK+ +
Sbjct: 263 DGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEK 322
Query: 329 AHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQ 388
A L RMV P++V+Y T+I K+G+ + +L M G + + ++
Sbjct: 323 AISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLIS 382
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
G KEG+ A++L E+ G ++ +Y +I LC+D +P A +L + G P
Sbjct: 383 GLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTP 442
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
+ + LM+ + + A+ + +M N + Y LI C G+ EA+ +
Sbjct: 443 NAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVW 502
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY------------DTE 556
+ML G PD +ING ++ G Q+Y D
Sbjct: 503 TQMLGKGCKPDVVAYSSMINGL----------SIAGLVEDAMQLYNEMLCQGPDSQPDVV 552
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YN + N + +S+ ++L L G P+ +TC + L + ++
Sbjct: 553 TYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLD 601
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 16/287 (5%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +E+ F++ G++ + + + +++GL + D +V EM G PN +
Sbjct: 386 KEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAY 445
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T + L F + G+ + + + + F + V Y+ LI CK G++ +A ++ M
Sbjct: 446 TCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQM 505
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL--SPDIVSYNTLIFAYCKEG 359
+ PD+V Y++++NGL G V +A QL++ M+ +G PD+V+YN L+ CK+
Sbjct: 506 LGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQS 565
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ + LL M+ G PD TC I L L ++ + G R+ D
Sbjct: 566 SISRAIDLLNSMLDRGCDPDLVTCTI----------FLRMLREKLDPPQDG----REFLD 611
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
L+V L + R A+ ++E + Q P + ++E+LCK V
Sbjct: 612 ELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKV 658
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 201/444 (45%), Gaps = 13/444 (2%)
Query: 163 VDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCID 222
+ +F L++ A + G +R + F D +P +V+ LLNGL K +
Sbjct: 131 ISIFNSLLT-------ALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVG 183
Query: 223 QCWQVYEEMGRIG--ICPNTHTFNILTHVFCKNGDVDKVNGFL-EKIEE-EGFDPDLVTY 278
+V + M G +CP+ N + CK G + + F+ E++ G P+ VTY
Sbjct: 184 DALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTY 243
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH--RM 336
N L ++C+ G + A + M + V P+++T T++ GLC+ G+V A + F R
Sbjct: 244 NCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRT 303
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
V + V+Y+TL A+ + + L +EM +G PD ++ G + GRL
Sbjct: 304 VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRL 363
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
L A +++ G + Y+ LI C+ + A LLE + G P + YN L
Sbjct: 364 LDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTL 423
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LCK + L M+D +PS+ T+ L+ +C G++ EA+ + M E+ +
Sbjct: 424 LSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARI 483
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P++ I LI+ C ++V+ A L +K + +YNA+ + K E
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFE 543
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSL 600
L R PN +T ++ L
Sbjct: 544 LMDRMREERCTPNYVTVDVLMEWL 567
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 143/327 (43%), Gaps = 6/327 (1%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
A+ +VG I + K + G P++++ N ++ GL ++ + + + E + + P
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWP 306
Query: 239 ----NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
N T++ L F +VD ++ + G PD V Y T+IS + GRL DA
Sbjct: 307 EARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDA 366
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
M + D Y L+ G C++ K+ EA++L M GL PD+ +YNTL+
Sbjct: 367 CTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSG 426
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
CK G LL M+ +G P T +V GY K G+ AL + + + +
Sbjct: 427 LCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPN 486
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
IY+ LI LC+ A L + + + ++ YN L++ L A L D
Sbjct: 487 TVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMD 546
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRS 501
M + P+ T L+ IG +
Sbjct: 547 RMREERCTPNYVTVDVLMEWLPEIGET 573
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 164/353 (46%), Gaps = 7/353 (1%)
Query: 258 KVNGFLEKIEEEGFD-PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ GFL G PD+ +N+L+++ + G L L+ M +V PD+VTY L
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172
Query: 317 MNGLCKEGKVREAHQLFHRMVHRG--LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG- 373
+NGLCK G V +A ++ RM G + PDI NT++ CK G++Q++ + E M
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRH 232
Query: 374 -NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G P+ T + + + G + A +V +++ GV+ + + +I LC+ R
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292
Query: 433 AATSLL--ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRA 490
AA +R + Y+ L + C++V A+ L EM D +P Y
Sbjct: 293 AALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFT 352
Query: 491 LICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKF 550
+I GR +A + M ++G D++ +LI G+C +K +++A LL
Sbjct: 353 MISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVG 412
Query: 551 QIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +YN + + + GD S + EL + G P+ +T ++H K
Sbjct: 413 LQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKA 465
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 12/378 (3%)
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P+ FN L + G++ + + + PD+VTY L++ CK G + DA
Sbjct: 128 APDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALK 187
Query: 297 LYRIMYR--RNVLPDLVTYTTLMNGLCKEGKVREAHQLF-HRMVH-RGLSPDIVSYNTLI 352
+ M +V PD+ T+++GLCK G++++A RM H G +P+ V+YN L
Sbjct: 188 VLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLA 247
Query: 353 FAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF--- 409
A+C+ G + + ++ M G+ P+ T I+ G + GR+ +AL E +
Sbjct: 248 DAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE 307
Query: 410 --GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G +++ Y L A N A L + G+ P +Y ++ L + +
Sbjct: 308 ARGNAVT---YSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLL 364
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
DA M K Y LI FC + EA L++EM G+ PD L+
Sbjct: 365 DACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLL 424
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C D + + LLG ++ + + + + G + + + +
Sbjct: 425 SGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQ 484
Query: 588 PNNLTCKYMIHSLWKGME 605
PN + +I L K E
Sbjct: 485 PNTVIYNTLIDFLCKSRE 502
>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
Length = 697
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 208/419 (49%), Gaps = 6/419 (1%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ ++ F + +G + +I SCNFLL L + + ++ +++++ G PN +T+
Sbjct: 130 MLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYT 189
Query: 245 ILTHVFCK-----NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
I+ + +CK N D+++ + LE++EE+G +P +VTY I C+ G + DA+ +
Sbjct: 190 IMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQ 249
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ N ++ Y L+ G C++G+ EA +L M G+SPDI SY+ L+ A+C EG
Sbjct: 250 DLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEG 309
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
++ +L+ EM P C ++ G +G + LN EL G Y
Sbjct: 310 DIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYS 369
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI + + +A +L+ + ++G VP IY L+ C+ + +AL M+
Sbjct: 370 TLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQD 429
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
++P + T ++ +C G+ EA+ +++M + +LP+S V+IN C + V KA
Sbjct: 430 GLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKA 489
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAED-GDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L K Y + + +A+ + K +L ++ +LG P+N+T ++
Sbjct: 490 WEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLV 548
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 185/386 (47%), Gaps = 3/386 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSC-NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+VG I +++ + L QP + C N L+ G + D+ ++ EEM GI P+
Sbjct: 237 RVGSIEDAWNKIQD-LRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDI 295
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++++IL + FC GD++ ++++E P LV +++ KG +ND +
Sbjct: 296 YSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHE 355
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ + DL++Y+TL++G K V+ A+ L H M GL PD + Y +LI YC++G
Sbjct: 356 LSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGC 415
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++E+ Y M+ +G+ PD TC IV Y G+ AL + +++ + + Y
Sbjct: 416 LKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSV 475
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK-CDSVADALLLKDEMVDR 479
+I LC+ A +L + +D PS+ Y +M+ K + A L +M
Sbjct: 476 IINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKL 535
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
KP T L+ F G+ +A++L EM E G+ D +I+GYC +V +A
Sbjct: 536 GCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRA 595
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMF 565
++ + + ++Y + + F
Sbjct: 596 WSMYKKMKRNNVTPNVKTYTCLVDGF 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 179/407 (43%), Gaps = 45/407 (11%)
Query: 151 ELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVG--LIRESFKTFRKTLDVGFQPSIVSC 208
+L+E +KD S D++ I C ++ G LI+E +K P +V C
Sbjct: 281 KLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKK-------PPLVCC 333
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
+L GL ++ C + E+ G + +++ L H F K +V N + ++ +
Sbjct: 334 TSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRK 393
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR------------------------- 303
G PD + Y +LI YC+KG L +A + M +
Sbjct: 394 NGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEE 453
Query: 304 ----------RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIF 353
+N+LP+ TY+ ++N LCK V +A ++ M + P ++ Y T++
Sbjct: 454 ALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMD 513
Query: 354 AYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVS 412
Y K+ K LY M G PD T ++V + K G++ ALNL E+ G+S
Sbjct: 514 GYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLS 573
Query: 413 ISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLL 472
+ +I C+ A S+ +++ ++ P+++ Y L++ CK + A +L
Sbjct: 574 RDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATML 633
Query: 473 KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
D+M ++ P + TY ALI + I A + DEM + G LPD
Sbjct: 634 IDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPD 680
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 177/409 (43%), Gaps = 45/409 (11%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D I P +Y ++V+ M ++ E+ K P L+ CT
Sbjct: 288 DEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPP--------LVCCTSVLMG 339
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K GL+ + F + G++ ++S + L++G LK + + + EM + G+ P
Sbjct: 340 LRTK-GLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVP 398
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAF--- 295
+ + L +C+ G + + + ++G PD++T N ++ YC +G+ +A
Sbjct: 399 DYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYI 458
Query: 296 ------------YLYRI--------------------MYRRNVLPDLVTYTTLMNGLCKE 323
Y Y + M++ N+ P ++ YTT+M+G K+
Sbjct: 459 NQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ 518
Query: 324 GK-VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K +A +L+ +M G PD V+ L+ + K GKM ++ +L EM G+ D F
Sbjct: 519 FKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFA 578
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ GY + G + A ++ +++R V+ + Y L+ C+ R AT L++ +
Sbjct: 579 FTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMK 638
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
++ P ++ Y L+ + +++ A + DEM + P Y L
Sbjct: 639 RNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 161/351 (45%), Gaps = 23/351 (6%)
Query: 12 CINFISKLAFSSFSSASSSYSLQI---IQDSEHKSLSNPLYNFLPETQNPNKIV--DLIC 66
C+NF +L+ + SYS I ++ KS +N ++ P+ I+ LI
Sbjct: 349 CLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIR 408
Query: 67 SSLKKG------DSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
+KG + T+LQ+ L+P + H + + R Q + AL + N +K D
Sbjct: 409 EYCRKGCLKEALKNFYTMLQDGLQPDIITCN-HIVDQYCSRGQFEE--ALIYINQMK-DQ 464
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
I P S Y +I++ W K+ K L + KD ++F +I T +
Sbjct: 465 NILPNSYTYSVIIN---WLCKYQAVEKAWEVLPVMFKD-----NIFPSVIHYTTIMDGYA 516
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ +++K +RK +G +P V+ L++ K + + +++EM G+ +
Sbjct: 517 KQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDE 576
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
F + +C+ G+V + +K++ P++ TY L+ +CK RL+ A L
Sbjct: 577 FAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDD 636
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
M R +V PD+ TYT L+ G + + A+++F M +G PD ++Y TL
Sbjct: 637 MKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 5/322 (1%)
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI + L DA ++ + V ++ + L+ L + K+ LF + + G
Sbjct: 121 LIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSG 180
Query: 341 LSPDIVSYNTLIFAYCKEGK-----MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
SP++ +Y +I YCKE M+++ +L EM G P T + + G + G
Sbjct: 181 PSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGS 240
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ A N + +L+ ++ Y+ LI CQ RP A LLE + +G P + Y+
Sbjct: 241 IEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSI 300
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
L+ + C + + L EM N KP L +++ G + ++ E+ G
Sbjct: 301 LVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKG 360
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
D LI+G+ +V A L+ K + D Y ++ + G L + +
Sbjct: 361 YKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEAL 420
Query: 576 ELQKRFLRLGFAPNNLTCKYMI 597
+ L+ G P+ +TC +++
Sbjct: 421 KNFYTMLQDGLQPDIITCNHIV 442
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,312,804,267
Number of Sequences: 23463169
Number of extensions: 390214638
Number of successful extensions: 1084171
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8389
Number of HSP's successfully gapped in prelim test: 4230
Number of HSP's that attempted gapping in prelim test: 866336
Number of HSP's gapped (non-prelim): 79652
length of query: 609
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 460
effective length of database: 8,863,183,186
effective search space: 4077064265560
effective search space used: 4077064265560
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)