BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037911
(609 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FND8|PP409_ARATH Pentatricopeptide repeat-containing protein At5g40400
OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1
Length = 610
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/601 (55%), Positives = 438/601 (72%), Gaps = 19/601 (3%)
Query: 14 NFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGD 73
N +S L F FSS SSS + + K + NPLYN LP++QNP+KIVD+ICS+L D
Sbjct: 3 NLVSNLRF--FSSYSSSIVPRC--SNIPKPILNPLYNLLPQSQNPSKIVDVICSTLNHSD 58
Query: 74 SHLTL--LQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCL 131
+ L L++++K L+PHLG EISRVLLR QSD+ A+TFF WVK DL +P NYCL
Sbjct: 59 YSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCL 118
Query: 132 IVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW----------AYV 181
++HIL + KF AM+ LCEL+EL VDVF+ L+S T++CNW Y+
Sbjct: 119 LLHILVSSKKFPLAMQFLCELIELTSK-KEEVDVFRVLVSATDECNWDPVVFDMLVKGYL 177
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+GL+ E F+ FR+ LD GF S+V+CN LLNGLLKL+ ++ CWQVY M R+GI PNT+
Sbjct: 178 KLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTY 237
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFNILT+VFC + + +V+ FLEK+EEEGF+PDLVTYNTL+SSYC++GRL +AFYLY+IM
Sbjct: 238 TFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIM 297
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
YRR V+PDLVTYT+L+ GLCK+G+VREAHQ FHRMV RG+ PD +SYNTLI+AYCKEG M
Sbjct: 298 YRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMM 357
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
Q+SK LL+EM+GN + PD FTC++IV+G+ +EGRLLSA+N VVEL+R V I ++ D+L
Sbjct: 358 QQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFL 417
Query: 422 IVALCQDNRPFAATSLLER-IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
IV+LCQ+ +PFAA LL+R I ++G+ E YN L+ESL +CD++ +AL+LK ++ ++N
Sbjct: 418 IVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQN 477
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
TYRALI C C IGR+ EA SLM EM +S + PDS IC L+ GYC E D +KAE
Sbjct: 478 QVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAE 537
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDG-DLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL FA +F+I+D ESYN++ E G K +ELQ+R RLGF PN LTCKY+I
Sbjct: 538 RLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQV 597
Query: 600 L 600
L
Sbjct: 598 L 598
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 37/287 (12%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +RE+ +TF + +D G +P +S N L+ K + Q ++ EM + P+
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY-RI 300
T ++ F + G + F+ ++ D + LI S C++G+ A +L RI
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+ TY L+ L + + EA L ++ ++ D +Y LI C+ G+
Sbjct: 438 IEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGR 497
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE------GRLLS---------------- 398
+E++SL+ EM + + PD+F C +V GY KE RLLS
Sbjct: 498 NREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNS 557
Query: 399 --------------ALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
AL L +QR G +R YLI L Q + P
Sbjct: 558 LVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLP 604
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
I P+ T+ L FC E +++M E G PD L++ YC + +A
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L ++ + D +Y ++ +DG + + + R + G P+ ++ +I++
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 601 WK-GM 604
K GM
Sbjct: 352 CKEGM 356
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/630 (26%), Positives = 283/630 (44%), Gaps = 92/630 (14%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
+V+ IC SLK+G+ N+++ L L + VL RC++D F + +
Sbjct: 54 LVEKICFSLKQGN-------NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHF 106
Query: 121 -EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCN-- 177
K TS + ++HIL + + S A L ++ + +++ L S +C
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIR--RSGVSRLEIVNSLDSTFSNCGSN 164
Query: 178 --------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
YV+ +RE+ + F GF SI +CN L+ L+++ ++ W VY+
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
E+ R G+ N +T NI+ + CK+G ++KV FL +++E+G PD+VTYNTLIS+Y KG
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +AF L M + P + TY T++NGLCK GK A ++F M+ GLSPD +Y
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 350 TLIFAYCKEGKMQESKSLLYEMM---------------------GN-------------- 374
+L+ CK+G + E++ + +M GN
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G+ PD I++QGY ++G + A+NL E+ + G ++ Y+ ++ LC+ A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 435 TSLLERIGQDGYVP--------------------SLEI---------------YNELMES 459
L + + P ++E+ YN L++
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
K + A + +MV + I P+ +Y L+ C G EA + DEM+ + P
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
IC +I GYC + + E+ L + + D SYN + F + ++SK L K
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Query: 580 RF--LRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + G P+ T ++H + + K
Sbjct: 645 KMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 212/449 (47%), Gaps = 37/449 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
AY GL+ E+F+ GF P + + N ++NGL K ++ +V+ EM R G+ P
Sbjct: 279 AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSP 338
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
++ T+ L CK GDV + + PDLV +++++S + + G L+ A +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ ++PD V YT L+ G C++G + A L + M+ +G + D+V+YNT++ CK
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ E+ L EM ++PD++T I++ G+ K G L +A+ L +++ + + Y
Sbjct: 459 KMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTY 518
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ + A + + +P+ Y+ L+ +LC +A+A + DEM+
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI----------- 527
+NIKP++ ++I +C G + + S +++M+ G +PD LI
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 528 --------------------------NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+G+C + + +AE +L ++ D +Y +
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
N F +L++ + L+ GF+P++
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 3/363 (0%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
S DV DL+ C + + G + ++ F + G P V L+ G +
Sbjct: 367 RSRDVVPDLV-CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + EM + G + T+N + H CK + + + ++ E PD T
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTI 485
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI +CK G L +A L++ M + + D+VTY TL++G K G + A +++ MV +
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P +SY+ L+ A C +G + E+ + EM+ I P C +++GY + G
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI--GQDGYVPSLEIYNELME 458
+ + ++ G Y+ LI ++ A L++++ Q G VP + YN ++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C+ + + +A ++ +M++R + P STY +I F EA + DEML+ G P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 519 DSQ 521
D +
Sbjct: 726 DDK 728
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 271/580 (46%), Gaps = 57/580 (9%)
Query: 72 GDSHLTLLQN---DLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSN 128
D LT L+ L L + S +LL+ Q+D L F NW T
Sbjct: 25 ADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFF--TLRC 82
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW---------- 178
C+ +HIL + A + ++ D ++ VF+ L + C
Sbjct: 83 KCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVK 142
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK-LNCIDQCWQVYEEMGRIGIC 237
+Y ++ LI ++ GF P ++S N +L+ ++ I V++EM +
Sbjct: 143 SYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS 202
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
PN T+NIL FC G++D +K+E +G P++VTYNTLI YCK +++D F L
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
R M + + P+L++Y ++NGLC+EG+++E + M RG S D V+YNTLI YCK
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFT--------CQ------------------------- 384
EG ++ + EM+ +G+ P T C+
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 385 --IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
+V G+ ++G + A ++ E+ G S S Y+ LI C + A ++LE +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ G P + Y+ ++ C+ V +AL +K EMV++ IKP TY +LI FC R+
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA L +EML G+ PD LIN YCME D+ KA L +K + D +Y+ +
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 563 NMFAEDGDLSKLMELQKRFLRLGF---APNNLTCKYMIHS 599
N + S+ E ++ L+L + P+++T +I +
Sbjct: 563 NGLNKQ---SRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 224/497 (45%), Gaps = 24/497 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
++ P Y +++ + A+ + ++ K C +V + LI Y
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKME--TKGCLPNVVTYNTLID-------GY 250
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
K+ I + FK R G +P+++S N ++NGL + + + V EM R G +
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N L +CK G+ + ++ G P ++TY +LI S CK G +N A
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M R + P+ TYTTL++G ++G + EA+++ M G SP +V+YN LI +C GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
M+++ ++L +M G+ PD + ++ G+ + + AL + E+ G+ Y
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI C+ R A L E + + G P Y L+ + C + AL L +EMV++
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV--------------- 525
+ P + TY LI R+ EA L+ ++ +P
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
LI G+CM+ + +A+ + K D +YN + + GD+ K L K ++ G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 586 FAPNNLTCKYMIHSLWK 602
F + +T ++ +L K
Sbjct: 671 FLLHTVTVIALVKALHK 687
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 212/429 (49%), Gaps = 15/429 (3%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G ++ + L G PS+++ L++ + K +++ + ++M G+CP
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T+ L F + G +++ L ++ + GF P +VTYN LI+ +C G++ DA +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + + PD+V+Y+T+++G C+ V EA ++ MV +G+ PD ++Y++LI +C++
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ +E+ L EM+ G+ PD FT ++ Y EG L AL L E+ GV Y
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES---------------LCKC 463
LI L + +R A LL ++ + VPS Y+ L+E+ C
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
+ +A + + M+ +N KP + Y +I C G +A +L EM++SG L +
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 524 RVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR 583
L+ E VN+ +++ + ++ + E + + +G++ ++++ +
Sbjct: 679 IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAK 738
Query: 584 LGFAPNNLT 592
GF PN ++
Sbjct: 739 DGFLPNGIS 747
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 282/624 (45%), Gaps = 60/624 (9%)
Query: 24 FSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDL 83
FS S S + D+ +P + +T+ ++I ++I L++ + L+ L
Sbjct: 25 FSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVI--KLRRAEP----LRRSL 78
Query: 84 KPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
KP + VL++ + D L FF+W ++ + S C+++H+ +
Sbjct: 79 KPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLES--LCIVIHLAVASKDLK 136
Query: 144 FAMKMLCELVELVK-DCPHSVDVFQDLISCTEDCNWA------------YVKVGLIRESF 190
A ++ E K + S F DL+ T +W V GL+RE+
Sbjct: 137 VAQSLISSFWERPKLNVTDSFVQFFDLLVYTYK-DWGSDPRVFDVFFQVLVDFGLLREAR 195
Query: 191 KTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ--VYEEMGRIGICPNTHTFNILTH 248
+ F K L+ G S+ SCN L L K +C V+ E +G+C N ++NI+ H
Sbjct: 196 RVFEKMLNYGLVLSVDSCNVYLTRLSK-DCYKTATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN--- 305
C+ G + + + L +E +G+ PD+++Y+T+++ YC+ G L+ + L +M R+
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 314
Query: 306 --------------------------------VLPDLVTYTTLMNGLCKEGKVREAHQLF 333
+LPD V YTTL++G CK G +R A + F
Sbjct: 315 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF 374
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKE 393
+ M R ++PD+++Y +I +C+ G M E+ L +EM G+ PD+ T ++ GY K
Sbjct: 375 YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKA 434
Query: 394 GRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G + A + + + G S + Y LI LC++ +A LL + + G P++ Y
Sbjct: 435 GHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTY 494
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N ++ LCK ++ +A+ L E + TY L+ +C G +A ++ EML
Sbjct: 495 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 554
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
G+ P VL+NG+C+ + E LL + K + ++N++ + +L
Sbjct: 555 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 614
Query: 574 LMELQKRFLRLGFAPNNLTCKYMI 597
+ K G P+ T + ++
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLV 638
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 229/477 (48%), Gaps = 9/477 (1%)
Query: 127 SNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLI 186
++Y +++H + + A +L L+EL P D+IS + N Y + G +
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTP-------DVISYSTVVN-GYCRFGEL 297
Query: 187 RESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNIL 246
+ +K G +P+ ++ L ++ + + + + EM R GI P+T + L
Sbjct: 298 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 357
Query: 247 THVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNV 306
FCK GD+ + F ++ PD++TY +IS +C+ G + +A L+ M+ + +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Query: 307 LPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKS 366
PD VT+T L+NG CK G +++A ++ + M+ G SP++V+Y TLI CKEG + +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 367 LLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALC 426
LL+EM G+ P+ FT IV G K G + A+ LV E + G++ Y L+ A C
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ A +L+ + G P++ +N LM C + D L + M+ + I P+ +
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFF 546
T+ +L+ +C A ++ +M G+ PD + L+ G+C +++ +A L
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 547 AKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
K +Y+ + F + + E+ + R G A + + + +KG
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKG 714
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 181/418 (43%), Gaps = 53/418 (12%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTF 112
P + I+ L+C K ++ + + +LP + + + C+ + A +
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY-TTLIDGFCKRGDIRAASK 372
Query: 113 FNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMK----MLCELVELVKDCPHSVDVFQD 168
F + + +I P Y I+ A K M C+ +E P SV F +
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE-----PDSV-TFTE 426
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI+ Y K G ++++F+ + G P++V+ L++GL K +D ++
Sbjct: 427 LIN-------GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 229 EEMGRIGICPNTHTFN-----------------------------------ILTHVFCKN 253
EM +IG+ PN T+N L +CK+
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 254 GDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTY 313
G++DK L+++ +G P +VT+N L++ +C G L D L M + + P+ T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 314 TTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMG 373
+L+ C ++ A ++ M RG+ PD +Y L+ +CK M+E+ L EM G
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKG 659
Query: 374 NGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
G T ++++G+ K + L A + +++R G++ ++I+D+ + RP
Sbjct: 660 KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 217/458 (47%), Gaps = 16/458 (3%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ RVL+ + D A FF W K + +YC++ HIL + A +L E+V
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAY----------VKVGLIRESFKTFRKTLDVGFQPS 204
DC DVF L S C + + +G++ E+ + F K P
Sbjct: 171 SKADC----DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPK 226
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
SCN LL+ KL D + +++M G P T+NI+ CK GDV+ G E
Sbjct: 227 TRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFE 286
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
+++ G PD VTYN++I + K GRL+D + M PD++TY L+N CK G
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ + + M GL P++VSY+TL+ A+CKEG MQ++ +M G+ P+ +T
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ K G L A L E+ + GV + Y LI LC R A L ++
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G +P+L YN L+ K ++ AL L +E+ R IKP L Y I C + + A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+M+EM E G+ +S I L++ Y K N E L
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYF--KSGNPTEGL 562
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 213/449 (47%), Gaps = 46/449 (10%)
Query: 154 ELVKD--CPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
E +KD C V + LI+C C + + +GL + +R+ G +P++VS + L
Sbjct: 321 EEMKDMCCEPDVITYNALINCF--CKFGKLPIGL-----EFYREMKGNGLKPNVVSYSTL 373
Query: 212 LNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF 271
++ K + Q + Y +M R+G+ PN +T+ L CK G++ ++ + G
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQ 331
+ ++VTY LI C R+ +A L+ M V+P+L +Y L++G K + A +
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 332 LFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYG 391
L + + RG+ PD++ Y T I+ C K++ +K ++ EM GI ++ ++ Y
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 392 KEGRLLSALNLVVELQR------------------------------------FGVSISR 415
K G L+L+ E++ FG+ +
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 416 DIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDE 475
I+ +I LC+DN+ AAT+L E++ Q G VP Y LM+ K +V +AL L+D+
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M + +K L Y +L+ + +A S ++EM+ G+ PD +C ++ +
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 733
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+++A L + K Q+ +++ NA+ NM
Sbjct: 734 IDEAVELQSYLMKH-QLLTSDNDNALPNM 761
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 236/496 (47%), Gaps = 15/496 (3%)
Query: 109 ALTFFNWV--KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
AL F WV + LE C+ HIL + A +L EL + S VF
Sbjct: 53 ALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLM---SGKSSFVF 109
Query: 167 QDLISCTEDCN----------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
L++ CN Y++ G+I++S + FR GF PS+ +CN +L ++
Sbjct: 110 GALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
K W +EM + ICP+ TFNIL +V C G +K + ++K+E+ G+ P +V
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
TYNT++ YCKKGR A L M + V D+ TY L++ LC+ ++ + + L M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
R + P+ V+YNTLI + EGK+ + LL EM+ G+ P+ T ++ G+ EG
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AL + ++ G++ S Y L+ LC++ A R+ ++G Y +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
++ LCK + +A++L +EM I P + TY ALI FC +GR A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ I LI C + +A + + D ++N + + G +++ E
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 577 LQKRFLRLGFAPNNLT 592
+ G PN ++
Sbjct: 530 FMRCMTSDGILPNTVS 545
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 215/519 (41%), Gaps = 49/519 (9%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y +++ + K A ++L E++ H F LI ++
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT--FNALID-------GHI 344
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
G +E+ K F G PS VS LL+GL K D Y M R G+C
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ + CKNG +D+ L ++ ++G DPD+VTY+ LI+ +CK GR A + +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 302 YRRNVLPDLVTYTTLM-----------------------------------NGLCKEGKV 326
YR + P+ + Y+TL+ LCK GKV
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
EA + M G+ P+ VS++ LI Y G+ ++ S+ EM G +P FT +
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
++G K G L A + L ++ +Y+ L+ A+C+ A SL + Q
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDR-NIKPSLSTYRALICCFCGIGRSGEAV 505
+P Y L+ LC+ A+L E R N+ P+ Y + G+ +
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
++M G PD +I+GY + K LL + + +YN + + +
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
++ D+S L + + G P+ LTC HSL G+
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTC----HSLVLGI 799
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 5/431 (1%)
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+W Y K G + + + G + + N L++ L + N I + + + +M + I
Sbjct: 236 HW-YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 294
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PN T+N L + F G V + L ++ G P+ VT+N LI + +G +A
Sbjct: 295 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALK 354
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ +M + + P V+Y L++GLCK + A + RM G+ ++Y +I C
Sbjct: 355 MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G + E+ LL EM +GI PD T ++ G+ K GR +A +V + R G+S +
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
IY LI C+ A + E + +G+ +N L+ SLCK VA+A M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
I P+ ++ LI + G +A S+ DEM + G P L+ G C +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+AE L DT YN + + G+L+K + L ++ P++ Y
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS----YT 650
Query: 597 IHSLWKGMERK 607
SL G+ RK
Sbjct: 651 YTSLISGLCRK 661
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 201/432 (46%), Gaps = 3/432 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ KVG + + + + VG P+ + + L+ ++ C+ + ++YE M G
Sbjct: 447 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 506
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ TFN+L CK G V + F+ + +G P+ V+++ LI+ Y G AF ++
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M + P TY +L+ GLCK G +REA + + + D V YNTL+ A CK
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 626
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
G + ++ SL EM+ I PD++T ++ G ++G+ + A+ E + R V ++ +
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y + + + + A E++ G+ P + N +++ + + L EM
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++N P+L+TY L+ + + L ++ +G+LPD C L+ G C +
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 806
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+L F + D ++N + + +G+++ +L K LG + + TC M+
Sbjct: 807 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 866
Query: 598 HSLWKGMERKFQ 609
L + +FQ
Sbjct: 867 SVLNR--NHRFQ 876
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 193/455 (42%), Gaps = 36/455 (7%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G +RE+ K + V V N LL + K + + ++ EM + I P+++
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 242 TFNILTHVFCKNGDV------------------DKV------NG------------FLEK 265
T+ L C+ G +KV +G F E+
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 709
Query: 266 IEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGK 325
++ G PD+VT N +I Y + G++ L M +N P+L TY L++G K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 769
Query: 326 VREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQI 385
V + L+ ++ G+ PD ++ ++L+ C+ ++ +L + G+ D +T +
Sbjct: 770 VSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNM 829
Query: 386 IVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDG 445
++ G + A +LV + G+S+ +D D ++ L +++R + +L + + G
Sbjct: 830 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 889
Query: 446 YVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
P Y L+ LC+ + A ++K+EM+ I P A++ G++ EA
Sbjct: 890 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 949
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
L+ ML+ ++P L++ C +V +A L + D SYN +
Sbjct: 950 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 566 AEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
GD++ EL + GF N T K +I L
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 129/326 (39%), Gaps = 35/326 (10%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
Y+ LI Y ++G + D+ ++R+M P + T ++ + K G+ M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+ R + PD+ ++N LI C EG ++S L+ +M +G P T ++ Y K+GR
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
AA LL+ + G + YN L
Sbjct: 245 K-----------------------------------AAIELLDHMKSKGVDADVCTYNML 269
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ + +A LL +M R I P+ TY LI F G+ A L++EML G+
Sbjct: 270 IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGL 329
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
P+ LI+G+ E + +A + K SY + + ++ +
Sbjct: 330 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 389
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWK 602
R R G +T MI L K
Sbjct: 390 FYMRMKRNGVCVGRITYTGMIDGLCK 415
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 5/247 (2%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G I +F + +G +C+ +++ L + + + V EM + GI P + +
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L + C+ GD+ E++ P V + ++ + K G+ ++A L R M +
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
++P + ++TTLM+ CK G V EA +L M + GL D+VSYN LI C +G M
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVE--LQR---FGVSISRDIY 418
+ L EM G+G + T + +++G S +++++ L R +S+S+D +
Sbjct: 1018 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSLSQDSH 1077
Query: 419 DYLIVAL 425
L +A+
Sbjct: 1078 RNLKMAM 1084
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 36/310 (11%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K + SF +R + G P ++C+ L+ G+ + N ++ ++ + G+
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 822
Query: 239 NTHTFNILTHVFCKNGDVD-----------------------------------KVNGFL 263
+ +TFN+L C NG+++ + L
Sbjct: 823 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 882
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
++ ++G P+ Y LI+ C+ G + AF + M + P V + ++ L K
Sbjct: 883 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
GK EA L M+ L P I S+ TL+ CK G + E+ L M G+ D +
Sbjct: 943 GKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSY 1002
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA-ATSLLERIG 442
+++ G +G + A L E++ G + Y LI L F+ A +L+ +
Sbjct: 1003 NVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1062
Query: 443 QDGYVPSLEI 452
G++ S+ +
Sbjct: 1063 ARGFITSMSL 1072
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 232/504 (46%), Gaps = 16/504 (3%)
Query: 83 LKPLLPHLGAHEISRVL----LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAW 138
++ +LP L H + ++ L S+ A FF ++ + + T Y ++ LA
Sbjct: 73 IRKVLPSLSVHHVVDLINHNPLSLPQRSIFA--FFKFISSQPGFRFTVETYFVLARFLAV 130
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLIS--CTEDCNW-------AYVKVGLIRES 189
+ F+ A + L ELV K + VF L+ T C + Y +G I ++
Sbjct: 131 HEMFTEA-QSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDA 189
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
+ FR + F I C LL+ ++KLN W Y E+ G N + FNIL +
Sbjct: 190 IQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNK 249
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
FCK G++ ++I + P +V++NTLI+ YCK G L++ F L M + PD
Sbjct: 250 FCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPD 309
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
+ TY+ L+N LCKE K+ AH LF M RGL P+ V + TLI + + G++ K
Sbjct: 310 VFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQ 369
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDN 429
+M+ G+ PD +V G+ K G L++A N+V + R G+ + Y LI C+
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 430 RPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYR 489
A + + + Q+G ++ L+ +CK V DA EM+ IKP TY
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 490 ALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
++ FC G + L+ EM G +P VL+NG C + A+ LL
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 550 FQIYDTESYNAVFNMFAEDGDLSK 573
+ D +YN + + SK
Sbjct: 550 GVVPDDITYNTLLEGHHRHANSSK 573
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 2/201 (0%)
Query: 404 VELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+E+ G ++ +++ L+ C++ A + + I + P++ +N L+ CK
Sbjct: 229 MEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 464 DSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQIC 523
++ + LK +M +P + TY ALI C + A L DEM + G++P+ I
Sbjct: 289 GNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIF 348
Query: 524 RVLINGYCMEKDVN-KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
LI+G+ +++ E+ +K Q D YN + N F ++GDL + +
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQ-PDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 583 RLGFAPNNLTCKYMIHSLWKG 603
R G P+ +T +I +G
Sbjct: 408 RRGLRPDKITYTTLIDGFCRG 428
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 207/421 (49%), Gaps = 3/421 (0%)
Query: 185 LIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFN 244
++ E+ + F + GF P +CN +L L +LN I+ W Y +M R+ I N +TFN
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFN 229
Query: 245 ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRR 304
I+ +V CK G + K GFL +E G P +VTYNTL+ + +GR+ A + M +
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289
Query: 305 NVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQES 364
PD+ TY +++ +C EG+ A ++ M GL PD VSYN LI G ++ +
Sbjct: 290 GFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 365 KSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
+ EM+ G+ P +T ++ G E ++ +A L+ E++ G+ + Y+ LI
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
CQ A +L + + DG P+ Y L+ LC+ + +A L +++V + +KP
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
L L+ C IG A SL+ EM + PD L+ G C E +A L+G
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGM 604
++ D SYN + + +++ GD ++ L LGF P LT ++ L K
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 605 E 605
E
Sbjct: 587 E 587
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 12/391 (3%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ + F + IKPT Y +V + + A ++ E+ K
Sbjct: 236 CKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS--KGFQP 293
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + ++S CN + + R+ ++G P VS N L+ G +
Sbjct: 294 DMQTYNPILSWM--CNEG--------RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ + +EM + G+ P +T+N L H ++ + +I E+G D VTYN L
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIL 403
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ YC+ G AF L+ M + P TYT+L+ LC++ K REA +LF ++V +G+
Sbjct: 404 INGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGM 463
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V NTL+ +C G M + SLL EM I PD T +++G EG+ A
Sbjct: 464 KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARE 523
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ E++R G+ Y+ LI + A + + + G+ P+L YN L++ L
Sbjct: 524 LMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
K A L EM I P+ S++ ++I
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 4/328 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GFQP + + N +L+ + + +V EM IG+ P++ ++NIL NGD++
Sbjct: 290 GFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMA 346
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+ +++ ++G P TYNTLI + ++ A L R + + ++ D VTY L+NG
Sbjct: 347 FAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
C+ G ++A L M+ G+ P +Y +LI+ C++ K +E+ L +++G G+ PD
Sbjct: 407 YCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
++ G+ G + A +L+ E+ ++ Y+ L+ LC + + A L+
Sbjct: 467 LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMG 526
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ + G P YN L+ K A +++DEM+ P+L TY AL+
Sbjct: 527 EMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQ 586
Query: 500 RSGEAVSLMDEMLESGMLP-DSQICRVL 526
A L+ EM G++P DS C V+
Sbjct: 587 EGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 180/401 (44%), Gaps = 32/401 (7%)
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+T F++L C+ VD+ ++E+GF P T N +++ + R+ +A+ Y
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
MYR + ++ T+ ++N LCKEGK+++A M G+ P IV+YNTL+ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI- 417
G+++ ++ ++ EM G PD T I+ EGR L + E+ S+S +I
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNIL 333
Query: 418 -------------------------------YDYLIVALCQDNRPFAATSLLERIGQDGY 446
Y+ LI L +N+ AA L+ I + G
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
V YN L+ C+ A L DEM+ I+P+ TY +LI C ++ EA
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L ++++ GM PD + L++G+C ++++A +LL D +YN +
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+G + EL R G P++++ +I K + K
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 160/331 (48%), Gaps = 9/331 (2%)
Query: 135 ILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFR 194
IL+W A ++L E+ E + P SV + C+ + G + +F
Sbjct: 301 ILSWMCNEGRASEVLREMKE-IGLVPDSVSYNILIRGCSNN--------GDLEMAFAYRD 351
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
+ + G P+ + N L++GL N I+ + E+ GI ++ T+NIL + +C++G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
D K +++ +G P TY +LI C+K + +A L+ + + + PDLV
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
TLM+G C G + A L M ++PD V+YN L+ C EGK +E++ L+ EM
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
GI PD + ++ GY K+G A + E+ G + + Y+ L+ L ++ A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDS 465
LL + +G VP+ + ++E++ D+
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 272/594 (45%), Gaps = 62/594 (10%)
Query: 46 NPLYNFLPETQNPN-KIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQS 104
+PL LPE ++ + + + S L K + H + LK ++ + +S L
Sbjct: 46 SPLLRNLPEEESDSMSVPHRLLSILSKPNWHKS---PSLKSMVSAISPSHVSS-LFSLDL 101
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
D +AL F +W+ + K + +Y ++ +L N K+ +++
Sbjct: 102 DPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIK---------- 151
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSC-NFLLNGLLKLNCIDQ 223
SC + YV + L R+ K R L I+ C N LLN L + +D+
Sbjct: 152 ------SCDSVGDALYV-LDLCRKMNKDERFELKYKL---IIGCYNTLLNSLARFGLVDE 201
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
QVY EM +CPN +T+N + + +CK G+V++ N ++ KI E G DPD TY +LI
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 284 SYCKKGRLNDAFYLYRIMY----RRN-------------------------------VLP 308
YC++ L+ AF ++ M RRN P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ TYT L+ LC + EA L M G+ P+I +Y LI + C + K ++++ LL
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M+ G+ P+ T ++ GY K G + A+++V ++ +S + Y+ LI C+
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
N A +L ++ + +P + YN L++ C+ + A L M DR + P TY
Sbjct: 442 N-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++I C R EA L D + + G+ P+ + LI+GYC V++A +L
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K + ++ ++NA+ + DG L + L+++ +++G P T +IH L K
Sbjct: 561 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 208/420 (49%), Gaps = 13/420 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQ 167
A+ F +K+D E PT Y +++ L + + S A+ ++ E+ E +K H+ V
Sbjct: 307 AMDLFVKMKDD-ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D S C + + + + L+ G P++++ N L+NG K I+ V
Sbjct: 366 D--SLCSQCKFEKAR--------ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
E M + PNT T+N L +CK+ +V K G L K+ E PD+VTYN+LI C+
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + A+ L +M R ++PD TYT++++ LCK +V EA LF + +G++P++V
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y LI YCK GK+ E+ +L +M+ P++ T ++ G +G+L A L ++
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ G+ + LI L +D A S +++ G P Y +++ C+ +
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
DA + +M + + P L TY +LI + +G++ A ++ M ++G P LI
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 199/415 (47%), Gaps = 1/415 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ F K D P++ + L+ L + + +EM GI PN HT+ +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L C +K L ++ E+G P+++TYN LI+ YCK+G + DA + +M R
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ P+ TY L+ G CK V +A + ++M+ R + PD+V+YN+LI C+ G +
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
LL M G+ PD +T ++ K R+ A +L L++ GV+ + +Y LI
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C+ + A +LE++ +P+ +N L+ LC + +A LL+++MV ++P++
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
ST LI G A S +ML SG PD+ I YC E + AE ++
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D +Y+++ + + G + ++ KR G P+ T +I L
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 191/398 (47%), Gaps = 54/398 (13%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ ++ K L+ P +V+ N L++G + D +++ M G+ P+ T+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ CK+ V++ + +E++G +P++V Y LI YCK G++++A + M +N
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 306 VLPDLVTYTTLMNGLCKEGKVREA-----------------------HQL---------- 332
LP+ +T+ L++GLC +GK++EA H+L
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 333 --FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
F +M+ G PD +Y T I YC+EG++ +++ ++ +M NG+ PD FT +++GY
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ-------DNRPF----------- 432
G G+ A +++ ++ G S+ + LI L + + P
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRAL 491
LLE++ + P+ + Y +L+ +C+ ++ A + D M + I PS + AL
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
+ C C + + EA ++D+M+ G LP + C+VLI G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 140/313 (44%), Gaps = 59/313 (18%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
Y TL+N L + G V E Q++ M+ + P+I +YN ++ YCK G ++E+ + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
G+ PD FT ++ GY + L SA + E+ G + Y +LI LC R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR-- 303
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+ +A+ L +M D P++ TY LI
Sbjct: 304 ---------------------------------IDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
CG R EA++L+ EM E+G+ P+ VLI+ C + KA LLG +K +
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 553 YDTESYNAVFNMFAEDG------DLSKLMELQKRFLRLGFAPNNLT--------CKYMIH 598
+ +YNA+ N + + G D+ +LME +K +PN T CK +H
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNELIKGYCKSNVH 444
Query: 599 S----LWKGMERK 607
L K +ERK
Sbjct: 445 KAMGVLNKMLERK 457
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 159/392 (40%), Gaps = 38/392 (9%)
Query: 57 NPN-----KIVDLICSSLKKGDSHLTLLQNDLKPLLPH-LGAHEISRVLLRCQSDSVSAL 110
NPN ++D C + K ++HL L + K LP+ L + + L C +
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL--CADGKLKEA 586
Query: 111 TFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVEL-VKDCPHSVDVFQDL 169
T + ++PT S +++H L + F A +++ K H+ F
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ- 645
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
Y + G + ++ K + G P + + + L+ G L + + V +
Sbjct: 646 ---------TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 230 EMGRIGICPNTHTF-NILTHVF-CKNG----------------DVDKVNGFLEKIEEEGF 271
M G P+ HTF +++ H+ K G + D V LEK+ E
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 272 DPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR-RNVLPDLVTYTTLMNGLCKEGKVREAH 330
P+ +Y LI C+ G L A ++ M R + P + + L++ CK K EA
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++ M+ G P + S LI K+G+ + S+ ++ G Y D +II+ G
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
GK+G + + L +++ G S Y LI
Sbjct: 877 GKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 264/546 (48%), Gaps = 27/546 (4%)
Query: 61 IVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDL 120
I DLI K+ S L + D+ P +E+ R L+ + D L +++W+ +
Sbjct: 46 IADLI---EKQHWSKLGVHVTDINP-------NELFRQLISSELDPDLCLRYYSWLVKNS 95
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV-DVFQDLISCTEDCN-- 177
+I + ++H LA ++S L V D H V +F + C C
Sbjct: 96 DISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSD--HQVHSIFHAISMCDNVCVNS 153
Query: 178 -------WAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEE 230
AY F+ F+++ G++ S +SC L+ LLK N VY+E
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 231 MGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK--- 287
M R I PN TFN++ + CK G ++K +E ++ G P++V+YNTLI YCK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ A + + M +V P+L T+ L++G K+ + + ++F M+ + + P+++S
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
YN+LI C GK+ E+ S+ +M+ G+ P+ T ++ G+ K L AL++ ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G + +Y+ LI A C+ + +L E + ++G VP + YN L+ LC+ ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
A L D++ + + P L T+ L+ +C G S +A L+ EM + G+ P +++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
GYC E ++ A + K+ ++ + SYN + +++ G L L L G
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 587 APNNLT 592
PN +T
Sbjct: 573 VPNRIT 578
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 182/356 (51%), Gaps = 31/356 (8%)
Query: 136 LAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRK 195
L N K A +L E+VE D ++ F LI D W K + S K F++
Sbjct: 271 LGGNGKMYKADAVLKEMVE--NDVSPNLTTFNILI----DGFW---KDDNLPGSMKVFKE 321
Query: 196 TLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGD 255
LD +P+++S N L+NGL I + + ++M G+ PN T+N L + FCKN
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 256 VDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTT 315
+ + ++ +G P YN LI +YCK G+++D F L M R ++PD+ TY
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 316 LMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNG 375
L+ GLC+ G + A +LF ++ +GL PD+V+++ L+ YC++G+ +++ LL EM G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 376 IYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ---RFGVSISRDIYDYLIVALCQDNRPF 432
+ P T I+++GY KEG L +A N+ +++ R ++++ Y+ L+ Q +
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVAS--YNVLLQGYSQKGKLE 558
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
A LL + + G VP+ Y ++K+EMVD+ P + +
Sbjct: 559 DANMLLNEMLEKGLVPNRITYE----------------IVKEEMVDQGFVPDIEGH 598
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 140/273 (51%), Gaps = 3/273 (1%)
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ F R + G +S L+ A KE + + + + EM+ I P+ FT +++
Sbjct: 174 EAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINAL 233
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ---DNRPFAATSLLERIGQDGYV 447
K G++ A +++ +++ +G S + Y+ LI C+ + + + A ++L+ + ++
Sbjct: 234 CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVS 293
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P+L +N L++ K D++ ++ + EM+D+++KP++ +Y +LI C G+ EA+S+
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAE 567
D+M+ +G+ P+ LING+C + +A + G + + T YN + + + +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
G + L++ R G P+ T +I L
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 46/266 (17%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
D ++KP +Y +++ L K S A+ M ++V S V +LI+ N
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV--------SAGVQPNLITYNALIN- 374
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ K +++E+ F G P+ N L++ KL ID + + EEM R GI P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+N L C+NG+++ +++ +G PDLVT++ L+ YC+KG A L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLL 493
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEG---------------------------------- 324
+ M + + P +TY +M G CKEG
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 325 --KVREAHQLFHRMVHRGLSPDIVSY 348
K+ +A+ L + M+ +GL P+ ++Y
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/276 (18%), Positives = 124/276 (44%), Gaps = 7/276 (2%)
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM-MGNGIYPDTFTCQIIVQG 389
+L H + + I S+ + + + G + S+ + + M + + ++ ++V
Sbjct: 106 KLLHSLANAKRYSKIRSF---LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLA 162
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
Y R +G +S L++AL ++NR + + + + P+
Sbjct: 163 YANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE---AVS 506
+ +N ++ +LCK + A + ++M P++ +Y LI +C +G +G+ A +
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADA 282
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
++ EM+E+ + P+ +LI+G+ + ++ + + + + SYN++ N
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
G +S+ + ++ + + G PN +T +I+ K
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCK 378
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 238/508 (46%), Gaps = 47/508 (9%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
+ +FF W + K + + ++ IL + F A ++L +L + ++ S V +
Sbjct: 63 SWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQ--RELLSSPLVLRS 120
Query: 169 LIS-CTED-------CNWA---YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLK 217
L+ +ED +W Y K G+I +S F + G +P + +C LLN L+K
Sbjct: 121 LVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVK 180
Query: 218 LNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
D W+++++M ++G+ N H +N+L H K+GD +K L ++EE+G PD+ T
Sbjct: 181 QRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFT 240
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR-- 335
YNTLIS YCKK +A + M R V P++VTY + ++G +EG++REA +LF
Sbjct: 241 YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK 300
Query: 336 --------------------------------MVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
M RG SP +V+YN+++ C++G+++E
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL EM G I PD TC ++ Y K ++SA+ + ++ G+ + Y LI
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ A L + + G+ P Y+ L++ + + L +E R +
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
++ YR LI C + + A L + M + G++ DS I + Y V +A AL
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDL 571
+ + + + Y ++ +A D D+
Sbjct: 541 DVMYNRRLMVNLKLYKSISASYAGDNDV 568
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 208/422 (49%), Gaps = 3/422 (0%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E FK + G P I+ C L+ G +L + ++ E + G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N++ +CK G+++ L+++ PD+VTYNT++ S C G+L A +
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M +R+ PD++TYT L+ C++ V A +L M RG +PD+V+YN L+ CKEG+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
+ E+ L +M +G P+ T II++ GR + A L+ ++ R G S S ++
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
LI LC+ A +LE++ Q G P+ YN L+ CK + A+ + MV R
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
P + TY ++ C G+ +AV +++++ G P +I+G KA
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 541 ALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
LL K DT +Y+++ + +G + + ++ F R+G PN +T ++ L
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 601 WK 602
K
Sbjct: 530 CK 531
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 238/517 (46%), Gaps = 28/517 (5%)
Query: 24 FSSASSSYSLQIIQDSEH------KSLSNPLYNFLPETQNPNKIVDLI-CSSLKKGDSHL 76
+SS +SS++L+ ++ + H + FL + D+I C++L +G L
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 77 TLLQNDLKPLLPHLGAHEISRVLLR-------CQSDSVS-ALTFFNWVKNDLEIKPTSSN 128
+ K L G+ + V+ C++ ++ AL+ + + + P
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDR----MSVSPDVVT 206
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y I+ L + K AM++L +++ +DC V + LI T C + V
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEAT--CRDSGVG-----H 257
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ K + D G P +V+ N L+NG+ K +D+ + +M G PN T NI+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G L + +GF P +VT+N LI+ C+KG L A + M + P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+ ++Y L++G CKE K+ A + RMV RG PDIV+YNT++ A CK+GK++++ +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
++ G P T ++ G K G+ A+ L+ E++ + Y L+ L ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ A + G P+ +N +M LCK A+ M++R KP+ ++Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
LI G + EA+ L++E+ G++ S +V
Sbjct: 558 TILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 190/399 (47%), Gaps = 3/399 (0%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
Y K G I + + + P +V+ N +L L + Q +V + M + P
Sbjct: 181 GYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ IL C++ V L+++ + G PD+VTYN L++ CK+GRL++A
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M P+++T+ ++ +C G+ +A +L M+ +G SP +V++N LI C++
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
G + + +L +M +G P++ + ++ G+ KE ++ A+ + + G Y
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ ++ ALC+D + A +L ++ G P L YN +++ L K A+ L DEM
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+++KP TY +L+ G+ EA+ E G+ P++ ++ G C + ++
Sbjct: 478 KDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
A L F + + SY + A +G + +EL
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 454 NELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
N + + + + + + MV P + LI FC +G++ +A +++ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 514 SGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
SG +PD V+I+GYC ++N A ++L + D +YN + + G L +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQ 222
Query: 574 LMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
ME+ R L+ P+ +T +I + +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCR 251
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 205/403 (50%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P +VS ++NG K D+ + Y EM GI P+ T+N + CK +DK
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L + + G PD +TYN+++ YC G+ +A + M V PD+VTY+ LM+
Sbjct: 251 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCK G+ EA ++F M RGL P+I +Y TL+ Y +G + E LL M+ NGI+PD
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
+ I++ Y K+G++ A+ + ++++ G++ + Y +I LC+ R A E
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ +G P +YN L+ LC C+ A L EM+DR I + + ++I C G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R E+ L + M+ G+ P+ LINGYC+ +++A LL +T +Y+
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ N + + + + L K G +P+ +T ++ L++
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 214/435 (49%), Gaps = 1/435 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
D++S T N + K G +++ T+ + LD G P +V+ N ++ L K +D+ +V
Sbjct: 195 DVVSYTTVIN-GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
M + G+ P+ T+N + H +C +G + GFL+K+ +G +PD+VTY+ L+ CK
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
GR +A ++ M +R + P++ TY TL+ G +G + E H L MV G+ PD
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
++ LI AY K+GK+ ++ + +M G+ P+ T ++ K GR+ A+ ++
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
G+S +Y+ LI LC N+ A L+ + G + +N +++S CK V
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
++ L + MV +KP++ TY LI +C G+ EA+ L+ M+ G+ P++ LI
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
NGYC + A L D +YN + + + EL R G
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 613
Query: 588 PNNLTCKYMIHSLWK 602
T ++H L K
Sbjct: 614 IELSTYNIILHGLCK 628
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 175/380 (46%), Gaps = 35/380 (9%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G E+ K F G +P I + LL G + + + + M R GI P+ +
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
F+IL + K G VD+ K+ ++G +P+ VTY +I CK GR+ DA + M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 302 YRRNVLPDLVTYTTLMNGLC-----------------------------------KEGKV 326
+ P + Y +L++GLC KEG+V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 327 REAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQII 386
E+ +LF MV G+ P++++YNTLI YC GKM E+ LL M+ G+ P+T T +
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 387 VQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
+ GY K R+ AL L E++ GVS Y+ ++ L Q R AA L RI + G
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
L YN ++ LCK DAL + + ++K T+ +I +GR+ EA
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 507 LMDEMLESGMLPDSQICRVL 526
L +G++P+ R++
Sbjct: 673 LFVAFSSNGLVPNYWTYRLM 692
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 204/464 (43%), Gaps = 47/464 (10%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ-----VYEEMGRIGI 236
+ G + F + GF+ ++ LL GL C D+ V M +G
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL----CADKRTSDAMDIVLRRMTELGC 154
Query: 237 CPNTHTFNILTHVFC--------------------------------------KNGDVDK 258
PN ++NIL C K GD DK
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 259 VNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMN 318
++ + G PD+VTYN++I++ CK ++ A + M + V+PD +TY ++++
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 274
Query: 319 GLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYP 378
G C G+ +EA +M G+ PD+V+Y+ L+ CK G+ E++ + M G+ P
Sbjct: 275 GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKP 334
Query: 379 DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL 438
+ T ++QGY +G L+ L+ + R G+ ++ LI A + + A +
Sbjct: 335 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVF 394
Query: 439 ERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGI 498
++ Q G P+ Y ++ LCK V DA+L ++M+D + P Y +LI C
Sbjct: 395 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 454
Query: 499 GRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESY 558
+ A L+ EML+ G+ ++ +I+ +C E V ++E L + + +Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 559 NAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
N + N + G + + M+L + +G PN +T +I+ K
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 7/380 (1%)
Query: 228 YEEMGRIG---ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISS 284
Y M R G + P+ T+ IL C+ G +D L + ++GF D + + L+
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 285 YCKKGRLNDAF-YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR---G 340
C R +DA + R M +P++ +Y L+ GLC E + +EA +L H M G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD+VSY T+I + KEG ++ S +EM+ GI PD T I+ K + A+
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
++ + + GV Y+ ++ C +P A L+++ DG P + Y+ LM+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
CK +A + D M R +KP ++TY L+ + G E L+D M+ +G+ PD
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ +LI Y + V++A + ++ + +Y AV + + G + M ++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 581 FLRLGFAPNNLTCKYMIHSL 600
+ G +P N+ +IH L
Sbjct: 432 MIDEGLSPGNIVYNSLIHGL 451
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 216/484 (44%), Gaps = 13/484 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDC 176
D I P Y I+ L AM++L +V+ ++ DC +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH--------- 274
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
Y G +E+ +K G +P +V+ + L++ L K + ++++ M + G+
Sbjct: 275 --GYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL 332
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
P T+ L + G + +++G L+ + G PD ++ LI +Y K+G+++ A
Sbjct: 333 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAML 392
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
++ M ++ + P+ VTY ++ LCK G+V +A F +M+ GLSP + YN+LI C
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K + ++ L+ EM+ GI +T I+ + KEGR++ + L + R GV +
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVI 512
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
Y+ LI C + A LL + G P+ Y+ L+ CK + DAL+L EM
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ P + TY ++ R+ A L + ESG + ++++G C K
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 632
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
+ A + + ++N + + + G + +L F G PN T + M
Sbjct: 633 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 597 IHSL 600
++
Sbjct: 693 AENI 696
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 182/387 (47%), Gaps = 21/387 (5%)
Query: 64 LICSSLKKGDSHLTLL------QNDLKPLLPHLGAHEISRVLLRCQSDSVS-ALTFFNWV 116
LIC+ K+G +L Q L P GA + + C+S V A+ +F +
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA----VIGILCKSGRVEDAMLYFEQM 432
Query: 117 KNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
D + P + Y ++H L NK+ A +++ E+++ C +++ F +I
Sbjct: 433 I-DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR-GICLNTI-FFNSIID----- 484
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
++ K G + ES K F + +G +P++++ N L+NG +D+ ++ M +G+
Sbjct: 485 --SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFY 296
PNT T++ L + +CK ++ +++E G PD++TYN ++ + R A
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 297 LYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYC 356
LY + +L TY +++GLCK +A Q+F + L + ++N +I A
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 357 KEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD 416
K G+ E+K L NG+ P+ +T +++ + +G L L + ++ G ++
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQ 443
+ ++++ L Q A + L I +
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDE 749
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 236/512 (46%), Gaps = 46/512 (8%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
PT ++ + +A ++ + LC+ +E K HS+ +I+C C
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLA-LCKQME-SKGIAHSIYTLSIMINCFCRCRK----- 138
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC-IDQCWQVYEEMGRIGICPNTHT 242
+ +F T K + +G++P V N LLNGL L C + + ++ + M +G P T
Sbjct: 139 --LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC-LECRVSEALELVDRMVEMGHKPTLIT 195
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + C NG V ++++ E GF P+ VTY +++ CK G+ A L R M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
RN+ D V Y+ +++GLCK+G + A LF+ M +G DI++YNTLI +C G+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL +M+ I P+ T +++ + KEG+L A L+ E+ + G++ + Y+ LI
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++NR A +++ + G P + +N L+ CK + + D L L EM R +
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY L+ FC G+ A L EM+ + PD ++L++G C ++ KA +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 543 LGFFAKK-----FQIY------------------------------DTESYNAVFNMFAE 567
G K IY D +YN + +
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 568 DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LSK L ++ G AP+ LT +I +
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 206/420 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + ++ + ++ GFQP+ V+ +LN + K ++ +M I + +
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+I+ CK+G +D ++E +GF D++TYNTLI +C GR +D L R M +
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P++VT++ L++ KEGK+REA QL M+ RG++P+ ++YN+LI +CKE +++E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ M+ G PD T I++ GY K R+ L L E+ GV + Y+ L+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + P + Y L++ LC + AL + ++ ++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C + +A L + G+ D++ ++I+ C + ++KA+ L
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ D +YN + D D + EL + GF + T K +I+ L G
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 197/413 (47%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ FR + P+++ N L + + K + + ++M GI + +T +I+
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ FC+ + + KI + G++PD V +NTL++ C + R+++A L M
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P L+T TL+NGLC GKV +A L RMV G P+ V+Y ++ CK G+ + L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M I D II+ G K+G L +A NL E++ G Y+ LI C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
R LL + + P++ ++ L++S K + +A L EM+ R I P+ T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +LI FC R EA+ ++D M+ G PD +LINGYC ++ L +
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS 430
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ I +T +YN + F + G L +L + + P+ ++ K ++ L
Sbjct: 431 LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 201/406 (49%), Gaps = 9/406 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y +++++ + + + AM++L ++ E ++ + +I K
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEE--RNIKLDAVKYSIIID-------GLCK 275
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + +F F + GF+ I++ N L+ G D ++ +M + I PN T
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F++L F K G + + + L+++ + G P+ +TYN+LI +CK+ RL +A + +M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ PD++T+ L+NG CK ++ + +LF M RG+ + V+YNTL+ +C+ GK++
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+K L EM+ + PD + +I++ G G L AL + ++++ + + IY +I
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
+C ++ A L + G YN ++ LC+ DS++ A +L +M +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLIN 528
P TY LI G + A L++EM SG D +++IN
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 1/389 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L +GL+ + D ++ +M + P FN L K + V +++E +G
Sbjct: 60 LSSGLVGIKA-DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ T + +I+ +C+ +L+ AF + + PD V + TL+NGLC E +V EA
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L RMV G P +++ NTL+ C GK+ ++ L+ M+ G P+ T ++
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G+ A+ L+ +++ + + Y +I LC+D A +L + G+ +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ C D L +M+ R I P++ T+ LI F G+ EA L+ E
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ G+ P++ LI+G+C E + +A ++ K D ++N + N + +
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ +EL + G N +T ++
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQG 447
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 161/347 (46%), Gaps = 1/347 (0%)
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D V+ F + I+ P ++ +N L S+ K + L + M + + + T + +
Sbjct: 71 DAVDLFRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N C+ K+ A +++ G PD V +NTL+ C E ++ E+ L+ M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
P T +V G G++ A+ L+ + G + Y ++ +C+ + A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL ++ + Y+ +++ LCK S+ +A L +EM + K + TY LI FC
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTE 556
GR + L+ +M++ + P+ VLI+ + E + +A+ LL ++ +T
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 557 SYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+YN++ + F ++ L + +++ + G P+ +T +I+ K
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 130/278 (46%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K +A LF M+ P ++ +N L A K + + +L +M GI +T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I++ + + +L A + + ++ + G I++ L+ LC + R A L++R+ +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G+ P+L N L+ LC V+DA++L D MV+ +P+ TY ++ C G++ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L+ +M E + D+ ++I+G C + ++ A L K D +YN +
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
F G +L + ++ +PN +T +I S K
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 202 bits (513), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 250/526 (47%), Gaps = 27/526 (5%)
Query: 10 SFCINFISKLAFSSFSSASSSYSLQIIQDSEHKSLSNPLYNFLPETQNPN-KIVDLICSS 68
S +N + FSSF+ S S + ++ + + + P+ P +NP K DL +
Sbjct: 5 SIGVNRRLRYQFSSFAGYSGSENPRLFKTL--GAANTPI----PHRRNPEPKGQDLDFVN 58
Query: 69 LKKGDSHLTLLQND---LKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPT 125
+ +H L+Q+D L L HL + + VLL+ Q D + +L FFNW K +
Sbjct: 59 V----AHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHS 114
Query: 126 SSNYCLIVHILAWNNKFSFAMKMLCE-LVELVKDCPHSVDVFQDLISCTEDCNWA----- 179
+ +++H L N KF A +L + LV D P VF L+ +C+
Sbjct: 115 LETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLP--AKVFDALLYSYRECDSTPRVFD 172
Query: 180 -----YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRI 234
+ + R + TF + D GF P++ SCN ++ LL +D + Y EM R
Sbjct: 173 SLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRC 232
Query: 235 GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA 294
I PN +T N++ +C++G +DK L+ +E GF V+YNTLI+ +C+KG L+ A
Sbjct: 233 KISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSA 292
Query: 295 FYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFA 354
L +M + + P++VT+ TL++G C+ K++EA ++F M ++P+ V+YNTLI
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 355 YCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSIS 414
Y ++G + + +M+ NGI D T ++ G K+ + A V EL + + +
Sbjct: 353 YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPN 412
Query: 415 RDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKD 474
+ LI+ C L + + + G P+ + +N L+ + C+ + A +
Sbjct: 413 SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 475 EMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
EMV R+I T + G+ L+ EM L +S
Sbjct: 473 EMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 5/327 (1%)
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++++ GF P + + N +SS +GR++ A YR M R + P+ T +M+G C+ G
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ + +L M G VSYNTLI +C++G + + L M +G+ P+ T
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ + +L A + E++ V+ + Y+ LI Q A E + +
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
G + YN L+ LCK A E+ N+ P+ ST+ ALI C +
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
L M+ SG P+ Q +L++ +C +D + A +L ++ D+ + + V N
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 565 FAEDGD---LSKLMELQ--KRFLRLGF 586
G + KL++ K+FL+ F
Sbjct: 493 LKHQGKDQLVKKLLQEMEGKKFLQESF 519
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 125/288 (43%)
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ +L K R A F +M G P + S N + + +G++ + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
I P+ +T +++ GY + G+L + L+ +++R G + Y+ LI C+
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
+A L +G+ G P++ +N L+ C+ + +A + EM N+ P+ TY LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI 552
+ G A ++M+ +G+ D LI G C + KA + K+ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 553 YDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ +++A+ + + EL K +R G PN T ++ +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 161/391 (41%), Gaps = 25/391 (6%)
Query: 238 PNTH---TFNILTHVFCKNGDVDKVNGFLEKIEEEG--------FDPDLVTY-------- 278
P +H T I+ H KN L + G FD L +Y
Sbjct: 110 PGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPR 169
Query: 279 --NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
++L ++ + +A + M LP + + M+ L +G+V A + + M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
+SP+ + N ++ YC+ GK+ + LL +M G + ++ G+ ++G L
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
SAL L + + G+ + ++ LI C+ + A+ + + P+ YN L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ + A ++MV I+ + TY ALI C ++ +A + E+ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLME 576
+P+S LI G C+ K+ ++ L + + +++N + + F + D +
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 577 LQKRFLRLGFAPNNLTCKYMIHSLWKGMERK 607
+ + +R ++ T +H + G++ +
Sbjct: 470 VLREMVRRSIPLDSRT----VHQVCNGLKHQ 496
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
++E+ K F + V P+ V+ N L+NG + + ++ YE+M GI + T+N
Sbjct: 324 LQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNA 383
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L CK K F++++++E P+ T++ LI C + + F LY+ M R
Sbjct: 384 LIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG 443
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
P+ T+ L++ C+ A Q+ MV R + D + + + +GK Q K
Sbjct: 444 CHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVK 503
Query: 366 SLLYEMMGNGIYPDTF 381
LL EM G ++F
Sbjct: 504 KLLQEMEGKKFLQESF 519
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 195/362 (53%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+ G I +SF + + GF P++V L++G K I++ ++ EMG++G+ N
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L + KNG + EK++E+G P+L TYN +++ CK GR DAF ++ M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
R V ++VTY TL+ GLC+E K+ EA+++ +M G++P++++YNTLI +C GK+
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
++ SL ++ G+ P T I+V G+ ++G A +V E++ G+ S+ Y L
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + + A L + + G VP + Y+ L+ C + +A L MV++N
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P+ Y +I +C G S A+ L+ EM E + P+ R +I C E+ +AE
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 542 LL 543
L+
Sbjct: 535 LV 536
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 211/446 (47%), Gaps = 36/446 (8%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+YV+ + S F + +D GF P N+LL ++ + +Q W + E + +
Sbjct: 103 SYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVL 161
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDA---- 294
+ ++F IL C+ G+++K L ++ E GF P++V Y TLI CKKG + A
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 295 -------------------------------FYLYRIMYRRNVLPDLVTYTTLMNGLCKE 323
F +Y M V P+L TY +MN LCK+
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 324 GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTC 383
G+ ++A Q+F M RG+S +IV+YNTLI C+E K+ E+ ++ +M +GI P+ T
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 384 QIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQ 443
++ G+ G+L AL+L +L+ G+S S Y+ L+ C+ A +++ + +
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 444 DGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGE 503
G PS Y L+++ + D++ A+ L+ M + + P + TY LI FC G+ E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 504 AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFN 563
A L M+E P+ I +I GYC E +A LL +K + SY +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 564 MFAEDGDLSKLMELQKRFLRLGFAPN 589
+ ++ + L ++ + G P+
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 130/357 (36%), Gaps = 104/357 (29%)
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYP----------------------------- 378
Y +I +Y + + S S EM+ NG P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 379 -----DTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFA 433
D ++ I+++G + G + + +L++EL FG S + IY LI C+
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 434 ATSLL-----------------------------------ERIGQDGYVPSLEIYNELME 458
A L E++ +DG P+L YN +M
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 459 SLCKCDSVADALLLKDEMVDR-----------------------------------NIKP 483
LCK DA + DEM +R I P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+L TY LI FCG+G+ G+A+SL ++ G+ P +L++G+C + D + A ++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
++ +Y + + FA ++ K ++L+ LG P+ T +IH
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+Y+ +I + Q + S + +G+VP +N L+ + S +E
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 477 VDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDV 536
+ + + ++ LI C G ++ L+ E+ E G P+ I LI+G C + ++
Sbjct: 156 KSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 537 NKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYM 596
KA+ L K + + +Y + N ++G + E+ ++ G PN T +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 597 IHSLWK 602
++ L K
Sbjct: 275 MNQLCK 280
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/611 (26%), Positives = 258/611 (42%), Gaps = 135/611 (22%)
Query: 110 LTFFNWVKNDL-EIKPTSSNYCLI--VHILAWNNKFSFAMKMLCELVE------------ 154
++FF W + + E P+ S LI V L ++KF+ A +L +
Sbjct: 59 VSFFQWAQTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSL 118
Query: 155 ----LVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNF 210
L P S +F +S AY+ G + + F+K + + +P++++CN
Sbjct: 119 LHPNLHLSPPPSKALFDIALS-------AYLHEGKPHVALQIFQKMIRLKLKPNLLTCNT 171
Query: 211 LLNGLLKLN---CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIE 267
LL GL++ I +V+++M +IG+ N TFN+L + +C G ++ G LE++
Sbjct: 172 LLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMV 231
Query: 268 EE------------------------------------GFDPDLVTYNTLISSYCKKGRL 291
E G P+ VTYN L+ YCK G L
Sbjct: 232 SEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSL 291
Query: 292 NDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTL 351
+AF + +M + NVLPDL TY L+NGLC G +RE +L M L PD+V+YNTL
Sbjct: 292 KEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTL 351
Query: 352 IFAYCKEGKMQESKSLLYEMMGNGIY---------------------------------- 377
I + G E++ L+ +M +G+
Sbjct: 352 IDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHG 411
Query: 378 --PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAAT 435
PD T +++ Y K G L AL ++ E+ + G+ ++ + ++ ALC++ + A
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 436 SLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCF 495
+LL + G++ Y L+ + + V AL + DEM I P++ST+ +LI
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 496 CGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA---------------- 539
C G++ A+ DE+ ESG+LPD +I GYC E V KA
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 540 ----------------EALLGFFAKKFQ--IYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
E L FF + DT +YN + + F +D L + +L
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Query: 582 LRLGFAPNNLT 592
G P+ T
Sbjct: 652 EEKGLEPDRFT 662
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 203/444 (45%), Gaps = 54/444 (12%)
Query: 145 AMKMLCELVELVKDCPHSVDVFQDLISCTED------CNWAYVKVGLIRESFKTFRKTLD 198
++K ++VEL+K +V DL CT + CN G +RE +
Sbjct: 290 SLKEAFQIVELMK----QTNVLPDL--CTYNILINGLCN-----AGSMREGLELMDAMKS 338
Query: 199 VGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDK 258
+ QP +V+ N L++G +L + ++ E+M G+ N T NI CK +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 259 VNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLM 317
V + E ++ GF PD+VTY+TLI +Y K G L+ A + R M ++ + + +T T++
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTIL 458
Query: 318 NGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ LCKE K+ EAH L + RG D V+Y TLI + +E K+++
Sbjct: 459 DALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK-------------- 504
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
AL + E+++ ++ + ++ LI LC + A
Sbjct: 505 ---------------------ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + + G +P +N ++ CK V A +E + + KP T L+ C
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G + +A++ + ++E + D+ +I+ +C +K + +A LL +K D +
Sbjct: 604 EGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 558 YNAVFNMFAEDGDLSKLMELQKRF 581
YN+ ++ EDG LS+ EL K+F
Sbjct: 663 YNSFISLLMEDGKLSETDELLKKF 686
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 171/344 (49%), Gaps = 13/344 (3%)
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---EGKVREA 329
P ++ +S+Y +G+ + A +++ M R + P+L+T TL+ GL + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQ 388
++F MV G+S ++ ++N L+ YC EGK++++ +L M+ + PD T I++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 389 GYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVP 448
K+GRL L++++++ G+ +R Y+ L+ C+ A ++E + Q +P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 449 SLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLM 508
L YN L+ LC S+ + L L D M ++P + TY LI +G S EA LM
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 509 DEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY----DTESYNAVFNM 564
++M G+ + + + C E+ K EA+ + ++ D +Y+ +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEE---KREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ + GDLS +E+ + + G N +T ++ +L K ERK
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCK--ERKL 467
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
GF V+ L+ G + +++ ++++EM ++ I P TFN L C +G +
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ E G PD T+N++I YCK+GR+ AF Y + + PD T L+NG
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LCKEG +A F+ ++ D V+YNT+I A+CK+ K++E+ LL EM G+ PD
Sbjct: 601 LCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQ-RFGVSISRDI 417
FT + ++G+L L+ + +FG S+ RD+
Sbjct: 660 RFTYNSFISLLMEDGKLSETDELLKKFSGKFG-SMKRDL 697
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 127/275 (46%), Gaps = 8/275 (2%)
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
+ L H +H P ++ + AY EGK + + +M+ + P+ TC ++ G
Sbjct: 116 NSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIG 175
Query: 390 ---YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
Y + SA + ++ + GVS++ ++ L+ C + + A +LER+ +
Sbjct: 176 LVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFK 235
Query: 447 V-PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAV 505
V P YN +++++ K ++D L +M + P+ TY L+ +C +G EA
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 506 SLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMF 565
+++ M ++ +LPD +LING C + + L+ D +YN + +
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 566 AEDG---DLSKLME-LQKRFLRLGFAPNNLTCKYM 596
E G + KLME ++ ++ +N++ K++
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWL 390
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 221/470 (47%), Gaps = 14/470 (2%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE--LVKDCPHSVDVFQDLISCTEDCNWA 179
IKP S + +++ L ++ A+ ML ++ LV D V Q
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ-----------G 233
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG-RIGICP 238
Y++ G + + + + ++ G S VS N +++G K ++ +EM + G P
Sbjct: 234 YIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP 293
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ +TFN L + CK G V ++ + +EG+DPD+ TYN++IS CK G + +A +
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M R+ P+ VTY TL++ LCKE +V EA +L + +G+ PD+ ++N+LI C
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+ + L EM G PD FT +++ +G+L ALN++ +++ G + S Y
Sbjct: 414 RNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ LI C+ N+ A + + + G + YN L++ LCK V DA L D+M+
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
KP TY +L+ FC G +A ++ M +G PD LI+G C V
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAP 588
A LL K +YN V ++ + L + L AP
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 232/532 (43%), Gaps = 28/532 (5%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKML-------CEL 152
LR Q D +AL FN P + Y I+ L + F K+L CE+
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 153 --------------VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE--SFK----T 192
EL + VD D D ++ + L+ + S K +
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
K G +P + + N L+ L + + + + E+M G+ P+ TF + + +
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN-VLPDLV 311
GD+D E++ E G V+ N ++ +CK+GR+ DA + M ++ PD
Sbjct: 237 EGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY 296
Query: 312 TYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM 371
T+ TL+NGLCK G V+ A ++ M+ G PD+ +YN++I CK G+++E+ +L +M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 372 MGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRP 431
+ P+T T ++ KE ++ A L L G+ ++ LI LC
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 432 FAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRAL 491
A L E + G P YN L++SLC + +AL + +M S+ TY L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 492 ICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQ 551
I FC ++ EA + DEM G+ +S LI+G C + V A L+ + Q
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 552 IYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
D +YN++ F GD+ K ++ + G P+ +T +I L K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 175/350 (50%), Gaps = 2/350 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K+G ++E+ + + + P+ V+ N L++ L K N +++ ++ + GI P+
Sbjct: 342 KLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TFN L C + E++ +G +PD TYN LI S C KG+L++A + + M
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++TY TL++G CK K REA ++F M G+S + V+YNTLI CK ++
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+++ L+ +M+ G PD +T ++ + + G + A ++V + G Y L
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN- 480
I LC+ R A+ LL I G + YN +++ L + +A+ L EM+++N
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Query: 481 IKPSLSTYRALICCFC-GIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
P +YR + C G G EAV + E+LE G +P+ +L G
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ + G I+++ + G +P IV+ L++GL K ++ ++ + GI
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 240 THTFN-ILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK-KGRLNDAFYL 297
H +N ++ +F K + +N F E +E+ PD V+Y + C G + +A
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDF 669
Query: 298 YRIMYRRNVLPDLVTYTTLMNGL 320
+ + +P+ + L GL
Sbjct: 670 LVELLEKGFVPEFSSLYMLAEGL 692
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 203/400 (50%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D E+M +GI N +T+NIL + FC+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT N+L++ +C R++DA L M PD VT+TTL++GL
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG PD+V+Y ++ CK G + +LL +M I +
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K ALNL E++ GV + Y LI LC R A+ LL +
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L ++ L+++ K + A L +EM+ R+I P++ TY +LI FC + R G
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA +++ M+ LP+ LING+C K V+K L +++ + +T +Y +
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + +G PN LT ++ L K
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 188/385 (48%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D ++ M + P+ F+ L K D V F EK+E G +L TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI+ +C+ RL+ A L M + PD+VT +L+NG C ++ +A L +MV G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD V++ TLI K E+ +L+ M+ G PD T +V G K G AL
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
NL+ +++ + + IY +I +LC+ A +L + G P++ Y+ L+ L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C +DA L +M++R I P+L T+ ALI F G+ +A L +EM++ + P+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
LING+CM + +A+ +L +K + + +YN + N F + + K MEL +
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGME 605
+ G N +T +IH ++ +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARD 443
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 180/375 (48%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +G++P IV+ N LLNG N I + ++M +G P+T TF L H +
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+ ++++ + G PDLVTY +++ CK+G + A L M + ++V Y+
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T+++ LCK +A LF M ++G+ P++++Y++LI C G+ ++ LL +M+
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
I P+ T ++ + K+G+L+ A L E+ + + + Y LI C +R A
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEA 377
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+LE + + +P++ YN L+ CK V + L EM R + + TY LI
Sbjct: 378 KQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHG 437
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F A + +M+ G+ P+ +L++G C + KA + + + D
Sbjct: 438 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Query: 555 TESYNAVFNMFAEDG 569
+YN + + G
Sbjct: 498 IYTYNIMIEGMCKAG 512
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 177/361 (49%), Gaps = 9/361 (2%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
N+ S A+ ++ ++VE+ P +V F LI N A V LI + +
Sbjct: 162 NRISDAVALVDQMVEMGYK-PDTV-TFTTLIHGLFLHNKASEAVALID-------RMVQR 212
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K D + +M I N ++ + CK D
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
++E +G P+++TY++LIS C GR +DA L M R + P+LVT++ L++
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
K+GK+ +A +L+ M+ R + P+I +Y++LI +C ++ E+K +L M+ P+
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T ++ G+ K R+ + L E+ + G+ + Y LI Q A + +
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P++ YN L++ LCK +A A+++ + + ++P + TY +I C G
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Query: 500 R 500
+
Sbjct: 513 K 513
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 168/345 (48%), Gaps = 9/345 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
++ KP + + ++H L +NK S A+ ++ +V+ + C DL++ N
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQ--RGCQ------PDLVTYGAVVN- 226
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K G + K + ++V + +++ L K D ++ EM G+ P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L C G + L + E +P+LVT++ LI ++ KKG+L A LY
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R++ P++ TY++L+NG C ++ EA Q+ M+ + P++V+YNTLI +CK
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ + L EM G+ +T T ++ G+ + +A + ++ GV + Y
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKC 463
+ L+ LC++ + A + E + + P + YN ++E +CK
Sbjct: 467 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 511
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISR--VLLRCQSDSV--- 107
P+ +V+ +C K+GD+ L L LL + A +I V+ DS+
Sbjct: 216 PDLVTYGAVVNGLC---KRGDTDLAL------NLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 108 ----SALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSV 163
AL F ++N ++P Y ++ L ++S A ++L +++E K P+ V
Sbjct: 267 RHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLV 324
Query: 164 DVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQ 223
F LI A+VK G + ++ K + + + P+I + + L+NG L+ + +
Sbjct: 325 -TFSALID-------AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 224 CWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLIS 283
Q+ E M R PN T+N L + FCK VDK ++ + G + VTY TLI
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 284 SYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSP 343
+ + ++A +++ M V P+++TY L++GLCK GK+ +A +F + + P
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Query: 344 DIVSYNTLIFAYCKEGK 360
DI +YN +I CK GK
Sbjct: 497 DIYTYNIMIEGMCKAGK 513
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 195 bits (495), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 232/511 (45%), Gaps = 71/511 (13%)
Query: 85 PLLP-HLGAHEISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFS 143
PLLP H+ A +++CQ D + AL FN ++ ++ K T S Y ++ L + KF
Sbjct: 4 PLLPKHVTA------VIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFE 57
Query: 144 FAMKMLCELVELVKD-------------------CPHSVDVFQ--DLISCTEDCNWAY-- 180
++L ++ E V + +V+VF+ D C E ++Y
Sbjct: 58 AMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDC-EPTVFSYNA 116
Query: 181 -----VKVGLIRESFKTFRKTLDVGFQPSIVSCNF----------------LLNGL---- 215
V G ++ K + + D G P + S LLN +
Sbjct: 117 IMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG 176
Query: 216 LKLNCIDQCWQV------------YEEMGRI---GICPNTHTFNILTHVFCKNGDVDKVN 260
++N + C V YE G++ G+ TFN L V CK GDV +
Sbjct: 177 CEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECE 236
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
L+K+ + G P+L TYN I C++G L+ A + + + PD++TY L+ GL
Sbjct: 237 KLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGL 296
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK K +EA +MV+ GL PD +YNTLI YCK G +Q ++ ++ + + NG PD
Sbjct: 297 CKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
FT + ++ G EG AL L E G+ + +Y+ LI L A L
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ + G +P ++ +N L+ LCK V+DA L M+ + P + T+ LI + +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYC 531
A+ ++D ML++G+ PD L+NG C
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 200/422 (47%), Gaps = 1/422 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G ++E K K + G P++ + N + GL + +D ++ + G P+
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N L + CKN + +L K+ EG +PD TYNTLI+ YCK G + A +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+PD TY +L++GLC EG+ A LF+ + +G+ P+++ YNTLI +G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L EM G+ P+ T I+V G K G + A LV + G ++ L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I + A +L+ + +G P + YN L+ LCK D + MV++
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+L T+ L+ C + EA+ L++EM + PD+ LI+G+C D++ A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 542 LLGFFAKKFQIYD-TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
L + +++ T +YN + + F E +++ +L + + P+ T + M+
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 601 WK 602
K
Sbjct: 648 CK 649
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 179/364 (49%), Gaps = 20/364 (5%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + F + L G +P+++ N L+ GL I + Q+ EM G+ P TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NIL + CK G V +G ++ + +G+ PD+ T+N LI Y + ++ +A + +M
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
V PD+ TY +L+NGLCK K + + + MV +G +P++ ++N L+ + C+ K+ E
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR-FGVSISRDIYDYLI 422
+ LL EM + PD T ++ G+ K G L A L +++ + VS S Y+ +I
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIII 609
Query: 423 VALCQDNRPFAATSLLER-----IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
A + A L + +G DGY Y +++ CK +V EM+
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYT-----YRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
+ PSL+T +I C C R EA ++ M++ G++P++ +N C DV+
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTIC---DVD 715
Query: 538 KAEA 541
K E
Sbjct: 716 KKEV 719
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 202/405 (49%), Gaps = 1/405 (0%)
Query: 197 LDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDV 256
++ G +P +++ N L+ GL K + + +M G+ P+++T+N L +CK G V
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
+ GF PD TY +LI C +G N A L+ + + P+++ Y TL
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+ GL +G + EA QL + M +GL P++ ++N L+ CK G + ++ L+ M+ G
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
+PD FT I++ GY + ++ +AL ++ + GV Y+ L+ LC+ ++
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
+ + + G P+L +N L+ESLC+ + +AL L +EM ++++ P T+ LI FC
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQ-ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDT 555
G A +L +M E+ + S ++I+ + + +V AE L + D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+Y + + F + G+++ + + GF P+ T +I+ L
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 192/462 (41%), Gaps = 45/462 (9%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P Y L + L + A++M+ L+E + V + +LI + K
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIE--QGPKPDVITYNNLI-------YGLCKN 299
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+E+ K ++ G +P + N L+ G K + ++ + G P+ T+
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L C G+ ++ + +G P+++ YNTLI +G + +A L M
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++P++ T+ L+NGLCK G V +A L M+ +G PDI ++N LI Y + KM+
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ +L M+ NG+ PD +T ++ G K + + + G + + ++ L+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCD------------------- 464
+LC+ + A LLE + P + L++ CK
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 465 -----------------SVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
+V A L EMVDR + P TYR ++ FC G
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKF 659
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKK 549
+ EM+E+G +P +IN C+E V +A ++ +K
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 140/375 (37%), Gaps = 81/375 (21%)
Query: 267 EEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLV--TYTTLMNGLCKEG 324
+E GF L TY ++I G+ +A + R NV ++ Y M ++G
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKF-EAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKG 90
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
KV+EA +F RM P + SYN ++ G ++ + M GI PD ++
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLL------ 438
I ++ + C+ +RP AA LL
Sbjct: 151 IRMKSF-----------------------------------CKTSRPHAALRLLNNMSSQ 175
Query: 439 ------------------ERIGQDGY-----------VPSLEIYNELMESLCKCDSVADA 469
E +GY L +N+L+ LCK V +
Sbjct: 176 GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKEC 235
Query: 470 LLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
L D+++ R + P+L TY I C G AV ++ ++E G PD LI G
Sbjct: 236 EKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYG 295
Query: 530 YCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLR----LG 585
C +AE LG + D+ +YN + + + G +++L +R + G
Sbjct: 296 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG----MVQLAERIVGDAVFNG 351
Query: 586 FAPNNLTCKYMIHSL 600
F P+ T + +I L
Sbjct: 352 FVPDQFTYRSLIDGL 366
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 244/493 (49%), Gaps = 12/493 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A F +W+ + KP +Y +++ LA K A+++ E+ E + V +
Sbjct: 168 ARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDALELFDEMSE--RGVAPDVTCYNI 224
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTL-DVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI ++K + + + + + L D P++ + N +++GL K +D C ++
Sbjct: 225 LID-------GFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+E M + + +T++ L H C G+VDK +++E D+VTYNT++ +C+
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G++ ++ L+RIM +N + ++V+Y L+ GL + GK+ EA ++ M +G + D +
Sbjct: 338 CGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y I C G + ++ ++ E+ +G + D + I+ K+ RL A NLV E+
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
+ GV ++ + + LI L +D+R A+ L +G++G P++ YN L+ LCK
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLI 527
+A EM++ KP L TY L+C C + A+ L + L+SG+ D + +LI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 528 NGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFA 587
+G C ++ A ++ + + +YN + F + GD ++ + ++G
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 588 PNNLTCKYMIHSL 600
P+ ++ ++ L
Sbjct: 637 PDIISYNTIMKGL 649
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 224/530 (42%), Gaps = 51/530 (9%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK- 157
LL+ + + +A F+ P ++ ++ H + + + + +VEL++
Sbjct: 16 LLKSEKNPRAAFALFDSATR----HPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 158 -DCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGL 215
+C DV +I Y K + ++ F++ ++ G +P+I S N LLN
Sbjct: 72 QECKCDEDVALSVIK-------TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
++ + ++ G+ PN T+N+L + CK + +K GFL+ + +EGF PD+
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKE------------ 323
+Y+T+I+ K G+L+DA L+ M R V PD+ Y L++G KE
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDR 244
Query: 324 ------------------------GKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
G+V + +++ RM D+ +Y++LI C G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ +++S+ E+ D T ++ G+ + G++ +L L + S++ Y+
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL-WRIMEHKNSVNIVSYN 363
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
LI L ++ + AT + + GY Y + LC V AL + E+
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ Y ++I C C R EA +L+ EM + G+ +S +C LI G + + +A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPN 589
L K SYN + + G + K L G+ P+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPD 533
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 167/379 (44%), Gaps = 41/379 (10%)
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
+ + G I+ES + +R ++ +IVS N L+ GLL+ ID+ ++ M G
Sbjct: 334 GFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA 392
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
+ T+ I H C NG V+K G ++++E G D+ Y ++I CKK RL +A L
Sbjct: 393 DKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLV 452
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
+ M + V + L+ GL ++ ++ EA M G P +VSYN LI CK
Sbjct: 453 KEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKA 512
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
GK E+ + + EM+ NG PD T Y
Sbjct: 513 GKFGEASAFVKEMLENGWKPDLKT-----------------------------------Y 537
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
L+ LC+D + A L + Q G + ++N L+ LC + DA+ + M
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
RN +L TY L+ F +G S A + M + G+ PD ++ G CM + V+
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 539 AEALLGFF--AKKFQIYDT 555
A + FF A+ I+ T
Sbjct: 658 A---MEFFDDARNHGIFPT 673
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 437 LLERIGQDGYVPSLEIYNELMESL-CKCDS-VADALL-------LKDEMVD-----RNI- 481
+L R+ + V + EL+ S CKCD VA +++ + D+ +D R I
Sbjct: 49 ILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108
Query: 482 --KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P++ +Y L+ F + + SL +G+ P+ Q VLI C +K+ KA
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTC 593
L + K+ D SY+ V N A+ G L +EL G AP ++TC
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAP-DVTC 221
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 207/412 (50%), Gaps = 6/412 (1%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
+VG + E+F + + G QPS + L+ L ID+ + +++EM G PN H
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ +L C++G +++ NG K+ ++ P ++TYN LI+ YCK GR+ AF L +M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+R P++ T+ LM GLC+ GK +A L RM+ GLSPDIVSYN LI C+EG M
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+ LL M I PD T I+ + K+G+ A + + R G+S+ L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I +C+ + A +LE + + + + N +++ L K V + L + ++ +
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 482 KPSLSTYRALICCFCGIGRSGE---AVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
PS+ TY L+ G+ RSG+ + +++ M SG LP+ ++ING C V +
Sbjct: 578 VPSVVTYTTLV---DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
AE LL + +Y + + +G L + +E + + G+ N+
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 250/541 (46%), Gaps = 24/541 (4%)
Query: 81 NDLKPLLPHLGAHEISRVLLRCQSDSVSALTFFNWV--KNDLEIKPTSSNYCLIVHILAW 138
+ LK L+ H+ + S+V+ +SD+ + FF WV + PT N L + + +
Sbjct: 58 SSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSG 117
Query: 139 NNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY----------------VK 182
+ + A+ +V L+K+C L+ C ++ + K
Sbjct: 118 LYRVAHAV-----IVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAK 172
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ L ++ T+R+ GF ++ ++N L K + ++ +IG ++H
Sbjct: 173 LDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHI 232
Query: 243 FNILTHVFCKNGDV-DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
L FC+ ++ D + F +E P+ V+Y+ LI C+ GRL +AF L M
Sbjct: 233 GTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ P TYT L+ LC G + +A LF M+ RG P++ +Y LI C++GK+
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E+ + +M+ + I+P T ++ GY K+GR++ A L+ +++ + ++ L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
+ LC+ +P+ A LL+R+ +G P + YN L++ LC+ + A L M +I
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+P T+ A+I FC G++ A + + ML G+ D LI+G C A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+L K + S N + +M ++ + + + + + +LG P+ +T ++ L
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 602 K 602
+
Sbjct: 593 R 593
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 196/419 (46%), Gaps = 10/419 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P++ Y +++ L A + E++ + C +V + LI +
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP--RGCKPNVHTYTVLID-------GLCR 348
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I E+ RK + PS+++ N L+NG K + +++ M + PN T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN L C+ G K L+++ + G PD+V+YN LI C++G +N A+ L M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++ PD +T+T ++N CK+GK A M+ +G+S D V+ TLI CK GK +
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ +L ++ I + +I+ K ++ L ++ ++ + G+ S Y L+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
L + + +LE + G +P++ Y ++ LC+ V +A L M D +
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCM-EKDVNKAE 540
P+ TY ++ + G+ A+ + M+E G + +I L+ G+ + +K ++ +E
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 192/463 (41%), Gaps = 64/463 (13%)
Query: 157 KDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLL 216
+ C +V F +L+ +VG ++ ++ LD G P IVS N L++GL
Sbjct: 400 RACKPNVRTFNELME-------GLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 217 KLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLV 276
+ ++ +++ M I P+ TF + + FCK G D + FL + +G D V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVL----------------------------- 307
T TLI CK G+ DA ++ + + +L
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 308 ------PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P +VTYTTL++GL + G + + ++ M G P++ Y +I C+ G++
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
+E++ LL M +G+ P+ T ++V+GY G+L AL V + G ++ IY L
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 422 I--VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+ L Q + S + I P E NEL+ + + L +
Sbjct: 693 LQGFVLSQKGIDNSEESTVSDIALRETDP--ECINELISVVEQLGGCISGLCI------- 743
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
L+ C GR+ E+ L+ +LE G+ + + +++ YC +K K
Sbjct: 744 ----------FLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKC 792
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
L+ K + +S+ V ++GD + EL L
Sbjct: 793 MELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 154/357 (43%), Gaps = 35/357 (9%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
PHS++V D++S + C ++E K +G PS+V+ L++GL++
Sbjct: 546 PHSLNVILDMLS--KGCK--------VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
I +++ E M G PN + + I+ + C+ G V++ L +++ G P+ VTY
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG--LCKEGKVREAHQLFHRMV 337
++ Y G+L+ A R M R + Y++L+ G L ++G +
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIA 715
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
R P+ + N LI + E +G I + C +V KEGR
Sbjct: 716 LRETDPECI--NELIS--------------VVEQLGGCI---SGLCIFLVTRLCKEGRTD 756
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
+ +LV + GV + + + D ++ + C + L+ + + G+VPS + + ++
Sbjct: 757 ESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVI 815
Query: 458 ESLCKCDSVADALLLKDEMVDRN---IKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+ L K A L E++ N K + TY + G E + L+D++
Sbjct: 816 QGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 216/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S AM ++ +V K C DL++ N K
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMV--AKGCQ------PDLVTYGVVVN-GLCK 233
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G +F K +P ++ N +++GL K +D +++EM GI PN T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E +PD+ T++ LI ++ K+G+L +A LY M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ P +VTY++L+NG C ++ EA Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E + EM G+ +T T I++QG + G A + E+ GV + Y+ L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC++ + A + E + + P++ YN ++E +CK V D L + + +K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + Y +I FC G EA +L EM E G LP+S LI + D + L
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ D + V NM DG L K
Sbjct: 594 IKEMRSCGFAGDASTIGLVTNML-HDGRLDK 623
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 199/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ + LL+ + K+N D + E+M +GI N +T++IL + FC+ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P++VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y ++ CK G + +LL +M + P
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P + ++ L+++ K + +A L DEMV R+I PS+ TY +LI FC R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ PD LI G+C K V + + +++ + +T +YN +
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD E+ K + G PN +T ++ L K
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 203/416 (48%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP +V+ ++NGL K D + + +M + + P +N +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK +D +++E +G P++VTY++LIS C GR +DA L M R +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ T++ L++ KEGK+ EA +L+ MV R + P IV+Y++LI +C ++ E+K +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ + + E+ + G+ + Y+ LI L Q
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + DG P++ YN L++ LCK + A+++ + + ++P++ T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ PD +I+G+C + +A+AL
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ YN + DGD EL K GFA + T + + L G
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 189/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
NGL +L +D ++ EM + P+ F+ L K D V E+++ G
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+ TY+ LI+ +C++ +L A + M + P++VT ++L+NG C ++ EA L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M G P+ V++NTLI K E+ +L+ M+ G PD T ++V G K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G A NL+ ++++ + IY+ +I LC+ A +L + + G P++
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LC +DA L +M++R I P + T+ ALI F G+ EA L DEM+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P LING+CM +++A+ + F K D +YN + F + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ ME+ + + G N +T +I L++
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 231/481 (48%), Gaps = 9/481 (1%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
L +P + + +V+ + S A+ ++ +VE+ K P DL++ + N
Sbjct: 134 LGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM-KQRP-------DLVTVSTLINGL 185
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+K G + E+ + ++ GFQP V+ +LN L K ++ +M I +
Sbjct: 186 CLK-GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
++I+ CK+G D ++E +G D+VTY++LI C G+ +D + R
Sbjct: 245 VVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M RN++PD+VT++ L++ KEGK+ EA +L++ M+ RG++PD ++YN+LI +CKE
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+ E+ + M+ G PD T I++ Y K R+ + L E+ G+ + Y+
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L++ CQ + AA L + + G PS+ Y L++ LC + AL + ++M
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+ + Y +I C + +A SL + + G+ PD V+I G C + +++A
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+ L + D +YN + L +EL + GF+ ++ T K +I
Sbjct: 545 DMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Query: 600 L 600
L
Sbjct: 605 L 605
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 194/414 (46%)
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+F + +G++P ++ + L+NG + + + + M + P+ T + L +
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
C G V + ++++ E GF PD VTY +++ CK G A L+R M RN+
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
+V Y+ +++ LCK+G +A LF+ M +G+ D+V+Y++LI C +GK + +L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
EM+G I PD T ++ + KEG+LL A L E+ G++ Y+ LI C++
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
N A + + + G P + Y+ L+ S CK V D + L E+ + + P+ TY
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
L+ FC G+ A L EM+ G+ P +L++G C ++NKA + K
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
YN + + + L G P+ +T MI L K
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 183/382 (47%), Gaps = 1/382 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L NG++ + ++ ++E M + P FN L + D V GF + +E G
Sbjct: 42 LRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D+ T +I+ YC+K +L AF + ++ PD +T++TL+NG C EG+V EA
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L RMV PD+V+ +TLI C +G++ E+ L+ M+ G PD T ++
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G AL+L +++ + S Y +I +LC+D A SL + G +
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC D + EM+ RNI P + T+ ALI F G+ EA L +E
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M+ G+ PD+ LI+G+C E +++A + K D +Y+ + N + +
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 571 LSKLMELQKRFLRLGFAPNNLT 592
+ M L + G PN +T
Sbjct: 401 VDDGMRLFREISSKGLIPNTIT 422
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 193/398 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI N LL+ + K+ D + E+M R+GI N +T+NIL + FC+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + + +LL +M I D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L +N L+++ K +A L D+M+ R+I P + TY +LI FC R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A + + M+ PD LI G+C K V L + + + DT +Y +
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
DGD ++ K+ + G P+ +T ++ L
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 214/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S A+ ++ +V+ + C ++ + +++ K
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN-------GLCK 162
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I +F K + +V N +++ L K +D +++EM GI PN T
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E+ +P+LVT+N LI ++ K+G+ +A L+ M
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI 282
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD+ TY +L+NG C ++ +A Q+F MV + PD+ +YNTLI +CK +++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ DT T ++QG +G +A + ++ GV Y L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + + A + + + + + IY ++E +CK V D L + + +K
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY +I C EA +L+ +M E G LPDS LI + + D + L
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 523 IREMRSCRFVGDASTIGLVANML-HDGRLDK 552
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 194/416 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K ID + + +M I + FN +
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK VD +++E +G P++VTY++LIS C GR +DA L M + +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+LVT+ L++ KEGK EA +L M+ R + PDI +YN+LI +C ++ ++K +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ L E+ G+ Y LI L
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D A + +++ DG P + Y+ L++ LC + AL + D M IK +
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ +I+G C ++ + +A ALL
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + D+ +YN + DGD + EL + F + T + + L G
Sbjct: 493 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 548
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 201/442 (45%), Gaps = 11/442 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 43 HNLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G ++ AF L M + D+V + T+++ LCK V +A LF M +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++V+Y++LI C G+ ++ LL +M+ I P+ T ++ + KEG+ + A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L ++ + SI DI+ Y LI C +R A + E + P L+ YN L++
Sbjct: 276 KLHDDMIK--RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK V D L EM R + TY LI G A + +M+ G+ P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +L++G C + KA + + K D Y + + G + +L
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
G PN +T MI L
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGL 475
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 178/364 (48%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ FN L K D V EK++ G +L TYN LI+ +C++ +++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + P +VT ++L+NG C ++ +A L +MV G PD +++ TLI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
K E+ +L+ M+ G P+ T ++V G K G + A NL+ +++ + I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
++ +I +LC+ A +L + + G P++ Y+ L+ LC +DA L +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
++ I P+L T+ ALI F G+ EA L D+M++ + PD LING+CM ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
KA+ + F K D ++YN + F + + EL + G + +T +I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 598 HSLW 601
L+
Sbjct: 368 QGLF 371
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+PS+ +N+L+ ++ K + L ++M I +L TY LI CFC + A++
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ +M++ G P L+NGYC K ++ A AL+ + DT ++ + +
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+ + L R ++ G PN +T +++ L K
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 179/349 (51%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +GF+P +V+ LLNG N I+ +++++ +G PN T+ L CKN
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
++ ++ G P++VTYN L++ C+ GR DA +L R M +R + P+++T+T
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFT 262
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
L++ K GK+ EA +L++ M+ + PD+ +Y +LI C G + E++ + Y M N
Sbjct: 263 ALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G YP+ ++ G+ K R+ + + E+ + GV + Y LI C RP A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ ++ P + YN L++ LC V AL++ + M R + ++ TY +I
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQG 442
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
C +G+ +A L + GM P+ +I+G+C +++A++L
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 196/398 (49%), Gaps = 6/398 (1%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI+ LL+ + K+N D ++E+M +GI P T NI+ H C + + + F
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + GF+PDLVT+ +L++ YC R+ DA L+ + P++VTYTTL+ LCK
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+ A +LF++M G P++V+YN L+ C+ G+ ++ LL +MM I P+ T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 383 CQIIVQGYGKEGRLLSALNLV-VELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLE 439
++ + K G+L+ A L V +Q +S+ D++ Y LI LC A +
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQ---MSVYPDVFTYGSLINGLCMYGLLDEARQMFY 317
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ ++G P+ IY L+ CK V D + + EM + + + TY LI +C +G
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R A + ++M PD + VL++G C V KA + + K+ + +Y
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + G + +L G PN +T MI
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 176 bits (445), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 180/355 (50%), Gaps = 1/355 (0%)
Query: 168 DLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQV 227
DL++ T N Y I ++ F + L +GF+P++V+ L+ L K ++ ++
Sbjct: 152 DLVTFTSLLN-GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ +MG G PN T+N L C+ G L + + +P+++T+ LI ++ K
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G+L +A LY +M + +V PD+ TY +L+NGLC G + EA Q+F+ M G P+ V
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y TLI +CK ++++ + YEM G+ +T T +++QGY GR A + ++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 408 RFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVA 467
Y+ L+ LC + + A + E + + ++ Y +++ +CK V
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 468 DALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
DA L + + +KP++ TY +I FC G EA SL +M E G LP+ +
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 163/345 (47%), Gaps = 10/345 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A+ F+ + + KP Y ++ L N + A+++ ++ +V +
Sbjct: 172 AIALFDQILG-MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG--TNGSRPNVVTYNA 228
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
L++ ++G ++ R + +P++++ L++ +K+ + + ++Y
Sbjct: 229 LVT-------GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M ++ + P+ T+ L + C G +D+ +E G P+ V Y TLI +CK
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
R+ D ++ M ++ V+ + +TYT L+ G C G+ A ++F++M R PDI +Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N L+ C GK++++ + M + + T II+QG K G++ A +L L
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIY 453
G+ + Y +I C+ A SL +++ +DG++P+ +Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 147/324 (45%), Gaps = 2/324 (0%)
Query: 277 TYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRM 336
+Y ++ + + NDA L+ M LP ++ +T L++ + K + LF +M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 337 VHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
G+ P + + N ++ C + + L +MM G PD T ++ GY R+
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 397 LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNEL 456
A+ L ++ G + Y LI LC++ A L ++G +G P++ YN L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 457 MESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM 516
+ LC+ DA L +M+ R I+P++ T+ ALI F +G+ EA L + M++ +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 517 LPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES-YNAVFNMFAEDGDLSKLM 575
PD LING CM +++A + + ++ Y E Y + + F + + M
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMF-YLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHS 599
++ + G N +T +I
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQG 372
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 198/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N + + E+M +GI + +T++I + FC+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R++DA L M PD T+TTL++GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L +MV RG PD+V+Y T++ CK G + + SLL +M I D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + ALNL E+ G+ Y LI LC R A+ LL +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ ++ L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LI G+C K V + L +++ + +T +Y +
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + +G PN LT ++ L K
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 222/472 (47%), Gaps = 10/472 (2%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C S +S ++ KP + + ++H L +NK S A+ ++ ++V+ + C
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ--RGCQP 221
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
+ + +++ K G I + +K + +V N +++GL K +
Sbjct: 222 DLVTYGTVVN-------GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D ++ EM GI P+ T++ L C G + L + E +P++VT++ L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I ++ K+G+L +A LY M +R++ PD+ TY++L+NG C ++ EA +F M+ +
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P++V+Y+TLI +CK +++E L EM G+ +T T ++ G+ + +A
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
+ ++ GV + Y+ L+ LC++ + A + E + + P + YN ++E +C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K V D L + + + P++ Y +I FC G EA SL+ +M E G LP+S
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
LI + D + L+ D + V NM DG L K
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 625
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 230/486 (47%), Gaps = 21/486 (4%)
Query: 128 NYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIR 187
Y + ++ ++ S A+ +L ++++L + D+++ + N Y I
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYE--------PDIVTLSSLLN-GYCHSKRIS 170
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++ + +++G++P + L++GL N + + ++M + G P+ T+ +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
+ CK GD+D L+K+E+ + D+V YNT+I CK ++DA L+ M + +
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ TY++L++ LC G+ +A +L M+ R ++P++V+++ LI A+ KEGK+ E++ L
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD------IYDYL 421
EM+ I PD FT ++ G+ RL A ++ F + IS+D Y L
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM------FELMISKDCFPNVVTYSTL 404
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C+ R L + Q G V + Y L+ + +A ++ +MV +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P++ TY L+ C G+ +A+ + + + S M PD ++I G C V
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
L + K + +YN + + F G + L K+ G PN+ T +I +
Sbjct: 525 LFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARL 584
Query: 602 KGMERK 607
+ +R+
Sbjct: 585 RDGDRE 590
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 199/404 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K ID + ++M + I + +N + CK +D
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 277
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ +G PD+ TY++LIS C GR +DA L M R + P++VT++ L++
Sbjct: 278 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 337
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G+ K R+ + L E+ + G+ + Y LI Q A + +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ G P++ YN L++ LCK +A A+++ + + ++P + TY +I C G
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ + L + G+ P+ +I+G+C + +A++LL + + ++ +YN
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ DGD EL K GFA + T + + L G
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 621
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 221/476 (46%), Gaps = 13/476 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L H + + I+C C + + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTYSIFINCF--CRRSQLSL 136
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L K + +G++P IV+ + LLNG I + ++M +G P+T TF
Sbjct: 137 AL-----AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L H + + ++++ + G PDLVTY T+++ CK+G ++ A L + M +
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ D+V Y T+++GLCK + +A LF M ++G+ PD+ +Y++LI C G+ +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--L 421
+ LL +M+ I P+ T ++ + KEG+L+ A L E+ + SI DI+ Y L
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSL 369
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C +R A + E + P++ Y+ L++ CK V + + L EM R +
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY LI F A + +M+ G+ P+ +L++G C + KA
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 489
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + D +YN + + G + EL G +PN + MI
Sbjct: 490 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 190/395 (48%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L N L + +D ++ +M + P+ FN L K + V E+++ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
DL TY+ I+ +C++ +L+ A + M + PD+VT ++L+NG C ++ +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD ++ TLI K E+ +L+ +M+ G PD T +V G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + AL+L+ ++++ + IY+ +I LC+ A +L + G P +
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC +DA L +M++R I P++ T+ ALI F G+ EA L DE
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD LING+CM +++A+ + K + +Y+ + F +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ + MEL + + G N +T +IH ++ +
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 170/312 (54%), Gaps = 1/312 (0%)
Query: 209 NFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE 268
N LLN L+KL+ ++ ++++E R C +T TFNIL C G +K L +
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 269 EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL-PDLVTYTTLMNGLCKEGKVR 327
G +PD+VTYNTLI +CK LN A +++ + +V PD+VTYT++++G CK GK+R
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 328 EAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIV 387
EA L M+ G+ P V++N L+ Y K G+M ++ + +M+ G +PD T ++
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 388 QGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
GY + G++ L E+ G+ + Y LI ALC +NR A LL ++ +
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 448 PSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
P +YN +++ CK V +A ++ +EM + KP T+ LI C GR EAVS+
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 508 MDEMLESGMLPD 519
+M+ G PD
Sbjct: 475 FHKMVAIGCSPD 486
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 170/358 (47%), Gaps = 5/358 (1%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+N+LT CK G D E ++ +G P+ L+SS+ +KG+L+ A L ++
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL--LL 162
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
V + +L+N L K +V +A +LF + D ++N LI C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY- 420
+++ LL M G G PD T ++QG+ K L A + +++ G S D+ Y
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPDVVTYT 281
Query: 421 -LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
+I C+ + A+SLL+ + + G P+ +N L++ K + A ++ +M+
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
P + T+ +LI +C +G+ + L +EM GM P++ +LIN C E + KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
LLG A K I YN V + F + G +++ + + + P+ +T +I
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 2/251 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P +V+ +++G K + + + ++M R+GI P TFN+L + K G++
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
K+ G PD+VT+ +LI YC+ G+++ F L+ M R + P+ TY+ L+N LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
E ++ +A +L ++ + + P YN +I +CK GK+ E+ ++ EM PD T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL--LER 440
I++ G+ +GR+ A+++ ++ G S + L+ L + A L + R
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 441 IGQDGYVPSLE 451
GQ V LE
Sbjct: 515 KGQSNNVVPLE 525
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 38/260 (14%)
Query: 347 SYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
+YN L + CK G + + M +G+ P+ +V + ++G+L
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL---------- 154
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
FA LL+ +G + N L+ +L K D V
Sbjct: 155 ------------------------HFATALLLQSFEVEG---CCMVVNSLLNTLVKLDRV 187
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
DA+ L DE + T+ LI CG+G++ +A+ L+ M G PD L
Sbjct: 188 EDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTL 247
Query: 527 INGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
I G+C ++NKA E + D +Y ++ + + + G + + L LRLG
Sbjct: 248 IQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLG 307
Query: 586 FAPNNLTCKYMIHSLWKGME 605
P N+T ++ K E
Sbjct: 308 IYPTNVTFNVLVDGYAKAGE 327
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 189 bits (480), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 198/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI N LL+ + K+ D + E+M R+GI N +T+NIL + FC+ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + + +LL +M I +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K ALNL E++ GV + Y LI LC R A+ LL +
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LING+C K +++ L +++ + +T +Y +
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + G PN +T ++ L K
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 193/395 (48%), Gaps = 1/395 (0%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L NGL + +D ++ M + P+ FN L K D V EK++ G
Sbjct: 57 LRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+L TYN LI+ +C++ +++ A L M + P +VT ++L+NG C ++ +A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD +++ TLI K E+ +L+ M+ G P+ T ++V G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + A NL+ +++ + + IY +I +LC+ A +L + G P++
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L+ LC + +DA L +M++R I P++ T+ ALI F G+ EA L DE
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD LING+CM +++A+ + K + +YN + N F +
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+ + +EL + + G N +T +IH ++ +
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 199/402 (49%), Gaps = 9/402 (2%)
Query: 119 DLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNW 178
++ +P + + ++H L +NK S A+ ++ +V+ + C ++ + +++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN------- 233
Query: 179 AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICP 238
K G I +F K + ++V + +++ L K D ++ EM G+ P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 239 NTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLY 298
N T++ L C + L + E +P++VT+N LI ++ K+G+L +A LY
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 299 RIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
M +R++ PD+ TY++L+NG C ++ EA +F M+ + P++V+YNTLI +CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
++ E L EM G+ +T T ++ G+ + +A + ++ GV + Y
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ L+ LC++ + A + E + + P++ YN ++E +CK V D L +
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
+ +KP + Y +I FC G EA +L +M E G LPDS
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 178/356 (50%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K ID + + +M I N ++ +
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK D ++E +G P+++TY++LIS C R +DA L M R +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++VT+ L++ KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +P+ T ++ G+ K R+ + L E+ + G+ + Y LI Q
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + +++ DG P++ YN L++ LCK + A+++ + + ++P++ T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
Y +I C G+ + L + G+ PD I +I+G+C + +A+AL
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 206/450 (45%), Gaps = 12/450 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H++ + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 118 HNLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G ++ AF L M + ++V Y+T+++ LCK +A LF M ++G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++++Y++LI C + ++ LL +M+ I P+ T ++ + KEG+L+ A
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L E+ + SI DI+ Y LI C +R A + E + P++ YN L+
Sbjct: 351 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN 408
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK + + + L EM R + + TY LI F A + +M+ G+ P
Sbjct: 409 GFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 468
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ L++G C + KA + + + +YN + + G + +L
Sbjct: 469 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Query: 579 KRFLRLGFAPNNLTCKYMIHSL-WKGMERK 607
G P+ + MI KG++ +
Sbjct: 529 CSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 105/180 (58%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P++V+ N L+NG K ID+ +++ EM + G+ NT T+ L H F + D D
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
+++ +G P+++TYNTL+ CK G+L A ++ + R + P + TY ++ G+CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
GKV + LF + +G+ PD++ YNT+I +C++G +E+ +L +M +G PD+ T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 221/480 (46%), Gaps = 9/480 (1%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P ++ + ++A ++ + LC+ +EL K H++ +I+C C K
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLD-LCKQMEL-KGIAHNLYTLSIMINCCCRCR----K 122
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
+ L +F K + +G++P V+ + L+NGL + + ++ + M +G P T
Sbjct: 123 LSL---AFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLIT 179
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L + C NG V ++++ E GF P+ VTY ++ CK G+ A L R M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
R + D V Y+ +++GLCK+G + A LF+ M +G DI+ Y TLI +C G+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWD 299
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ LL +M+ I PD ++ + KEG+L A L E+ + G+S Y LI
Sbjct: 300 DGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLI 359
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C++N+ A +L+ + G P++ +N L+ CK + + D L L +M R +
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
TY LI FC +G+ A L EM+ + PD ++L++G C + KA +
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
K D YN + + + +L G P+ T MI L K
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 236/507 (46%), Gaps = 11/507 (2%)
Query: 101 RCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
RC+ S++ +K L +P + + +++ L + S A++++ +VE+
Sbjct: 119 RCRKLSLAFSAMGKIIK--LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM----G 172
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H LI+ N + G + ++ + ++ GFQP+ V+ +L + K
Sbjct: 173 HK----PTLITLNALVNGLCLN-GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
++ +M I + ++I+ CK+G +D ++E +GF D++ Y T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI +C GR +D L R M +R + PD+V ++ L++ KEGK+REA +L M+ RG
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+SPD V+Y +LI +CKE ++ ++ +L M+ G P+ T I++ GY K + L
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
L ++ GV Y+ LI C+ + A L + + P + Y L++ L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDS 520
C AL + +++ ++ + Y +I C + +A L + G+ PD
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 521 QICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKR 580
+ ++I G C + +++A+ L + + +YN + +GD +K +L +
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 581 FLRLGFAPNNLTCKYMIHSLWKGMERK 607
R GF+ + T K ++ L G +K
Sbjct: 588 IKRCGFSVDASTVKMVVDMLSDGRLKK 614
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 180/378 (47%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P F+ L V + D V +++E +G +L T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ C+ +L+ AF + + PD VT++TL+NGLC EG+V EA +L RMV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
P +++ N L+ C GK+ ++ L+ M+ G P+ T +++ K G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L+ +++ + + Y +I LC+D A +L + G+ + IY L+ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
D L +M+ R I P + + ALI CF G+ EA L EM++ G+ PD+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI+G+C E ++KA +L K + ++N + N + + + +EL ++
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 582 LRLGFAPNNLTCKYMIHS 599
G + +T +I
Sbjct: 414 SLRGVVADTVTYNTLIQG 431
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 152/327 (46%)
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V+Y + S + +DA L++ M R P L+ ++ L + + + + L +
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGR 395
M +G++ ++ + + +I C+ K+ + S + +++ G PDT T ++ G EGR
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 396 LLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
+ AL LV + G + + L+ LC + + A L++R+ + G+ P+ Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
+++ +CK A A+ L +M +R IK Y +I C G A +L +EM G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
D I LI G+C + LL K+ D +++A+ + F ++G L +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
EL K ++ G +P+ +T +I K
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCK 364
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 230/485 (47%), Gaps = 9/485 (1%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + +++ L + S A++++ +VE+ H DLI+ N +
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEM----GHK----PDLITINTLVNGLCLS 206
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G E+ K ++ G QP+ V+ +LN + K ++ +M I +
Sbjct: 207 -GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++I+ CK+G +D ++E +G +++TYN LI +C GR +D L R M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R + P++VT++ L++ KEGK+REA +L M+HRG++PD ++Y +LI +CKE +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ ++ M+ G P+ T I++ GY K R+ L L ++ GV Y+ LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ + A L + + P++ Y L++ LC AL + +++ ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ Y +I C + +A L + G+ P + ++I G C + +++AE L
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ D +YN + DGD +K ++L + R GF+ + T K +I L
Sbjct: 566 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Query: 603 GMERK 607
G +K
Sbjct: 626 GRLKK 630
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 191/398 (47%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+ D + E+M R+ I +T+NIL + FC+ +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++P +VT ++L++ YC R++DA L M PD +T+TTL++GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG P++V+Y ++ CK G + +LL +M I D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + ALNL E++ G+ + Y LI LC R A+ LL +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P+L +N L+++ K +A L D+M+ R+I P + TY +L+ FC R
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
+A + + M+ PD LI G+C K V L + + + DT +Y +
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
DGD ++ K+ + G P+ +T ++ L
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 213/451 (47%), Gaps = 10/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P + + ++H L +NK S A+ ++ +V+ + C ++ + +++ K
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQ--RGCQPNLVTYGVVVN-------GLCK 237
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G + K + +V N +++ L K +D +++EM GI PN T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
++ L C G + L + E+ +P+LVT+N LI ++ K+G+ +A LY M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD+ TY +L+NG C ++ +A Q+F MV + PD+V+YNTLI +CK +++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ DT T ++QG +G +A + ++ GV Y L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + + A + + + + + IY ++E +CK V D L + + +K
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY +I C EA +L+ +M E G LP+S LI + + D + L
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 598 IREMRSCRFVGDASTIGLVANML-HDGRLDK 627
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 193/416 (46%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
E+ + + G QP++V+ ++NGL K D + +M I + FN +
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
CK VD +++E +G P++VTY++LIS C GR +DA L M + +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P+LVT+ L++ KEGK EA +L+ M+ R + PDI +YN+L+ +C ++ ++K +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
M+ +PD T +++G+ K R+ L E+ G+ Y LI L
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
D A + +++ DG P + Y+ L++ LC + AL + D M IK +
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y +I C G+ + L + G+ P+ +I+G C ++ + +A ALL
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ +YN + DGD + EL + F + T + + L G
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDG 623
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 197/442 (44%), Gaps = 11/442 (2%)
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
H + + LI+C + + I + K + +G++PSIV+ + LLNG
Sbjct: 118 HGLYTYNILINC-------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
I + ++M +G P+T TF L H + + ++++ + G P+LVTY
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
+++ CK+G + A L M + D+V + T+++ LCK V +A LF M +G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
+ P++V+Y++LI C G+ ++ LL +M+ I P+ T ++ + KEG+ + A
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 401 NLVVELQRFGVSISRDIYDY--LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L ++ + SI DI+ Y L+ C +R A + E + P + YN L++
Sbjct: 351 KLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
CK V D L EM R + TY LI G A + +M+ G+ P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
D +L++G C + KA + + K D Y + + G + +L
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
G PN +T MI L
Sbjct: 529 CSLSLKGVKPNVVTYNTMISGL 550
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 1/392 (0%)
Query: 210 FLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEE 269
L NGL + +D ++ M + P+ FN L K D V EK++
Sbjct: 56 ILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 270 GFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREA 329
L TYN LI+ +C++ +++ A L M + P +VT ++L+NG C ++ +A
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 330 HQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQG 389
L +MV G PD +++ TLI K E+ +L+ M+ G P+ T ++V G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K G ALNL+ +++ + I++ +I +LC+ A +L + + G P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMD 509
+ Y+ L+ LC +DA L +M+++ I P+L T+ ALI F G+ EA L D
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 510 EMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDG 569
+M++ + PD L+NG+CM ++KA+ + F K D +YN + F +
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW 601
+ EL + G + +T +I L+
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%)
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
R S Y ++ + K+ ++ L M+ + P ++ K +
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 399 ALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
++L ++QR + Y+ LI C+ ++ A +LL ++ + GY PS+ + L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
C ++DA+ L D+MV+ +P T+ LI ++ EAV+L+D M++ G P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQ 578
+ V++NG C D + A LL D +N + + + + + L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 579 KRFLRLGFAPNNLTCKYMIHSL 600
K G PN +T +I L
Sbjct: 284 KEMETKGIRPNVVTYSSLISCL 305
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 447 VPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVS 506
+PS+ +N+L+ ++ K + L ++M I L TY LI CFC + A++
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA 141
Query: 507 LMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFA 566
L+ +M++ G P L+NGYC K ++ A AL+ + DT ++ + +
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 567 EDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
S+ + L R ++ G PN +T +++ L K
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 7/360 (1%)
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
PH++ L++C C+ + + + K + +G +PSIV+ LLNG + +
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLG-------KMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
+ ++++M +G PN +N + CK+ VD L ++E++G PD+VTYN
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
+LIS C GR +DA + M +R + PD+ T+ L++ KEG+V EA + + M+ R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
L PDIV+Y+ LI+ C ++ E++ + M+ G +PD T I++ GY K ++
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 400 LNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMES 459
+ L E+ + GV + Y LI C+ + A + R+ G P++ YN L+
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 460 LCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPD 519
LC + AL++ +M + + TY +I C G +A + + G++PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 1/406 (0%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSI + LL+ + K+ D ++E+M +GI N T NIL + FC+ + F
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G +P +VT+ +L++ +C+ R+ DA Y++ M P++V Y T+++GLCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
+V A L +RM G+ PD+V+YN+LI C G+ ++ ++ M IYPD FT
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ KEGR+ A E+ R + Y LI LC +R A + +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
G P + Y+ L+ CK V + L EM R + + TY LI +C G+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
A + M+ G+ P+ VL++G C + KA +L K D +YN +
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLW-KGMERK 607
+ G+++ ++ G P+ T M+ L+ KG+ R+
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRRE 484
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%)
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y ++ + + +L+D+ L+ M + LP + ++ L++ + K K L+ +M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
G+ ++ + N L+ +C+ ++ + S L +M+ G P T ++ G+ + R+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
AL + ++ G + IY+ +I LC+ + A LL R+ +DG P + YN L+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 458 ESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGML 517
LC +DA + M R I P + T+ ALI GR EA +EM+ +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 518 PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMEL 577
PD +LI G CM +++AE + GF K D +Y+ + N + + + M+L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 578 QKRFLRLGFAPNNLTCKYMIHS 599
+ G N +T +I
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQG 370
Score = 34.3 bits (77), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 65/150 (43%)
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y E++ + + + D+L L MV PS++ + L+ + + + L ++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
G+ + C +L+N +C ++ A + LG K ++ ++ N F +
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ + + + +G+ PN + +I L K
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 212/457 (46%), Gaps = 26/457 (5%)
Query: 156 VKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGL 215
++ P ++ F LI C DC+ + S TF K +GFQP +V+ N LL+GL
Sbjct: 134 IRRIPLNIYSFNILIKCFCDCHK-------LSFSLSTFGKLTKLGFQPDVVTFNTLLHGL 186
Query: 216 LKLNCIDQCW---------------QVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVN 260
+ I + ++++M IG+ P TFN L + C G V +
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 261 GFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGL 320
+ K+ +G D+VTY T+++ CK G A L M ++ PD+V Y+ +++ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 321 CKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDT 380
CK+G +A LF M+ +G++P++ +YN +I +C G+ +++ LL +M+ I PD
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 381 FTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLER 440
T ++ KEG+L A L E+ + Y+ +I C+ NR A + +
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426
Query: 441 IGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGR 500
+ P + +N +++ C+ V + + L E+ R + + +TY LI FC +
Sbjct: 427 MAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 501 SGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNA 560
A L EM+ G+ PD+ C +L+ G+C + + +A L DT +YN
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ + + + + +L G P+ T MI
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 204/427 (47%), Gaps = 9/427 (2%)
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
V+ G + E+ F + +++G P +++ N L+NGL + + + +M G+ +
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+ + + CK GD L K+EE PD+V Y+ +I CK G +DA YL+
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + P++ TY +++G C G+ +A +L M+ R ++PD++++N LI A KEGK
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI--Y 418
+ E++ L EM+ I+PDT T ++ G+ K R A ++ F + S D+ +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM------FDLMASPDVVTF 435
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
+ +I C+ R LL I + G V + YN L+ C+ D++ A L EM+
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+ P T L+ FC + EA+ L + + S + D+ ++I+G C V++
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
A L D ++YN + + F +S L + G P+N T +I
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 599 SLWKGME 605
K E
Sbjct: 616 GCLKAGE 622
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 197/412 (47%), Gaps = 19/412 (4%)
Query: 204 SIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFL 263
+ V CN ++ +++N D +Y +M I N ++FNIL FC +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 264 EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL---------------P 308
K+ + GF PD+VT+NTL+ C + R+++A L+ M L P
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++T+ TL+NGLC EG+V EA L ++MV +GL D+V+Y T++ CK G + + +LL
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQD 428
+M I PD I+ K+G A L E+ G++ + Y+ +I C
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 429 NRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
R A LL + + P + +N L+ + K + +A L DEM+ R I P TY
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 489 RALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAK 548
++I FC R +A + D M PD +I+ YC K V++ LL ++
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 549 KFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ + +T +YN + + F E +L+ +L + + G P+ +TC +++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 164/328 (50%), Gaps = 4/328 (1%)
Query: 193 FRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCK 252
F + L+ G P++ + N +++G ++ +M I P+ TFN L K
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 253 NGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVT 312
G + + +++ PD VTYN++I +CK R +DA +++ +M PD+VT
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVT 434
Query: 313 YTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMM 372
+ T+++ C+ +V E QL + RGL + +YNTLI +C+ + ++ L EM+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 373 GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPF 432
+G+ PDT TC I++ G+ + +L AL L +Q + + Y+ +I +C+ ++
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 433 AATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALI 492
A L + G P ++ YN ++ C +++DA +L +M D +P STY LI
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 493 CCFCGIGRSGEAVSLMDEMLESGMLPDS 520
G +++ L+ EM +G D+
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 125/242 (51%), Gaps = 3/242 (1%)
Query: 190 FKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHV 249
F + D+ P +V+ N +++ + +D+ Q+ E+ R G+ NT T+N L H
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 250 FCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPD 309
FC+ +++ +++ G PD +T N L+ +C+ +L +A L+ ++ + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 310 LVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLY 369
V Y +++G+CK KV EA LF + G+ PD+ +YN +I +C + + ++ L +
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 370 EMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA-LCQD 428
+M NG PD T +++G K G + ++ L+ E++ G S D + +VA L D
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG--FSGDAFTIKMVADLITD 654
Query: 429 NR 430
R
Sbjct: 655 GR 656
Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 18/277 (6%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWA 179
I P + Y +++ +N+F A M D S DV F +I
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMF--------DLMASPDVVTFNTIID-------V 441
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
Y + + E + R+ G + + N L++G +++ ++ +++EM G+CP+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T T NIL + FC+N +++ E I+ D D V YN +I CK ++++A+ L+
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
+ V PD+ TY +++G C + + +A+ LFH+M G PD +YNTLI K G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
++ +S L+ EM NG D FT +++ +GRL
Sbjct: 622 EIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRL 657
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 15/327 (4%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L+DA + M R V ++ + + A L+ +M R + +I S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL-------------- 396
LI +C K+ S S ++ G PD T ++ G E R+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 397 -LSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
L A+ L ++ G++ ++ LI LC + R A +L+ ++ G + Y
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESG 515
++ +CK AL L +M + +IKP + Y A+I C G +A L EMLE G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 516 MLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLM 575
+ P+ +I+G+C + A+ LL ++ D ++NA+ + ++G L +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 576 ELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+L L P+ +T MI+ K
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCK 413
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 209/420 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + E+ + ++ G QP +V+ N ++NG+ + + +M + + T+
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
+ + C++G +D +++E +G +VTYN+L+ CK G+ ND L + M
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R ++P+++T+ L++ KEGK++EA++L+ M+ RG+SP+I++YNTL+ YC + ++ E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++L M+ N PD T +++GY R+ + + + + G+ + Y L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A L + + G +P + Y L++ LC + AL + +++ +
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ Y +I C G+ +A +L + G+ P+ V+I+G C + +++A LL
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + +YN + DGDL+ +L + GF+ + + K +I L G
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 182/379 (48%)
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
D +++EM R P+ F+ + + V F +++E G ++ T N +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
I+ +C+ + A+ + + + PD T+ TL+ GL EGKV EA L RMV G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD+V+YN+++ C+ G + LL +M + D FT I+ ++G + +A++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 402 LVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLC 461
L E++ G+ S Y+ L+ LC+ + LL+ + VP++ +N L++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 462 KCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQ 521
K + +A L EM+ R I P++ TY L+ +C R EA +++D M+ + PD
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 522 ICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRF 581
LI GYCM K V+ + +K+ + + +Y+ + F + G + EL +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 582 LRLGFAPNNLTCKYMIHSL 600
+ G P+ +T ++ L
Sbjct: 430 VSHGVLPDVMTYGILLDGL 448
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 189/397 (47%), Gaps = 16/397 (4%)
Query: 53 PETQNPNKIVDLICSSLKKGDSHLTL-LQNDLKPLLPHLGAHEISRVLLRCQSDSV--SA 109
P+ N IV+ IC S GD+ L L L ++ S ++ D +A
Sbjct: 191 PDVVTYNSIVNGICRS---GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 110 LTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDL 169
++ F ++ IK + Y +V L K++ +L ++V ++ +V F L
Sbjct: 248 ISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVL 304
Query: 170 ISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYE 229
+ +VK G ++E+ + +++ + G P+I++ N L++G N + + + +
Sbjct: 305 LD-------VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 230 EMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKG 289
M R P+ TF L +C VD I + G + VTY+ L+ +C+ G
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
++ A L++ M VLPD++TY L++GLC GK+ +A ++F + + IV Y
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYT 477
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
T+I CK GK++++ +L + G+ P+ T +++ G K+G L A L+ +++
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGY 446
G + + Y+ LI A +D A+ L+E + G+
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P Y ++ N+ S A ML +V C + F LI Y
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTSLIK-------GYC 379
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
V + + K FR G + V+ + L+ G + I ++++EM G+ P+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T+ IL C NG ++K E +++ D +V Y T+I CK G++ DA+ L+ +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+++TYT +++GLCK+G + EA+ L +M G +P+ +YNTLI A+ ++G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIV 387
S L+ EM G D + ++++
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVI 585
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 235/526 (44%), Gaps = 49/526 (9%)
Query: 116 VKNDL---EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISC 172
+K DL ++KP YC +V+ L +F ++M+ E++ L + P V L+
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL-RFSPSEAAV-SSLVE- 340
Query: 173 TEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMG 232
K G I E+ ++ +D G P++ N L++ L K + +++ MG
Sbjct: 341 ------GLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 233 RIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLN 292
+IG+ PN T++IL +FC+ G +D FL ++ + G + YN+LI+ +CK G ++
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 293 DAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDI------- 345
A M + + P +VTYT+LM G C +GK+ +A +L+H M +G++P I
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 346 ----------------------------VSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
V+YN +I YC+EG M ++ L EM GI
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PDT++ + ++ G G+ A V L + ++ Y L+ C++ + A S+
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
+ + Q G L Y L++ K L EM DR +KP Y ++I
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
G EA + D M+ G +P+ +ING C VN+AE L + + +
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 558 YNAVFNMFAE-DGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y ++ + + D+ K +EL L+ G N T +I +
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCR 799
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 239/527 (45%), Gaps = 52/527 (9%)
Query: 95 ISRVLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVE 154
+ +L+ D L FFN++ +++++C+++H L N F A +L L+
Sbjct: 73 VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132
Query: 155 LVKDCPHSVDVFQDLISCTEDCNWAYVKV-GLIRESFKTFRKTLD-----------VGFQ 202
DVF L SC E C + L+ + + R+ LD V
Sbjct: 133 RAL---KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLL 189
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
P + + + LL+GL+K +++ +M +GI P+ + + + C+ D+ +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC- 321
+ +E G D ++V YN LI CKK ++ +A + + + +++ PD+VTY TL+ GLC
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 322 ----------------------------------KEGKVREAHQLFHRMVHRGLSPDIVS 347
K GK+ EA L R+V G+SP++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVEL 406
YN LI + CK K E++ LL++ MG G+ P+ T I++ + + G+L +AL+ + E+
Sbjct: 370 YNALIDSLCKGRKFHEAE-LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
G+ +S Y+ LI C+ AA + + P++ Y LM C +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
AL L EM + I PS+ T+ L+ G +AV L +EM E + P+ V+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
I GYC E D++KA L +K + DT SY + + G S+
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 201/459 (43%), Gaps = 44/459 (9%)
Query: 102 CQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPH 161
C+ +SA F + +++PT Y ++ K + A+++ E+ K
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG--KGIAP 505
Query: 162 SVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCI 221
S+ F L+S + GLIR++ K F + + +P+ V+ N ++ G + +
Sbjct: 506 SIYTFTTLLS-------GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 222 DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTL 281
+ ++ +EM GI P+T+++ L H C G + F++ + + + + + Y L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 282 ISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGL 341
+ +C++G+L +A + + M +R V DLV Y L++G K + L M RGL
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 342 SPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALN 401
PD V Y ++I A K G +E+ + M+ G P+ T ++ G K G + A
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 402 LVVELQRF-----------------------------------GVSISRDIYDYLIVALC 426
L ++Q G+ + Y+ LI C
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFC 798
Query: 427 QDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLS 486
+ R A+ L+ R+ DG P Y ++ LC+ + V A+ L + M ++ I+P
Sbjct: 799 RQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 487 TYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
Y LI C G G+A L +EML G++P+++ R
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 233/488 (47%), Gaps = 16/488 (3%)
Query: 98 VLLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVK 157
+L+C+S + F ++ + ++ ++H+L +K++ A ++ L+E +K
Sbjct: 47 AILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLK 106
Query: 158 DCPHSVDVFQDLISCTEDCN-------------WAYVKVGLIRESFKTFRKTLDVGFQPS 204
++ L + ED ++++GL E+ R ++ P
Sbjct: 107 RHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR---EMKCSPD 163
Query: 205 IVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLE 264
+C +LNGL++ D W Y+ M G+ P+ H + +L K G K L+
Sbjct: 164 SKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLD 223
Query: 265 KIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEG 324
++ G P++ Y I C+ ++ +A ++ +M + VLP+L TY+ +++G CK G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
VR+A+ L+ ++ L P++V + TL+ +CK ++ ++SL M+ G+ P+ +
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
++ G+ K G +L A+ L+ E++ +S Y LI LC +++ A L +++ +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
PS YN L+ CK ++ AL L EM ++P++ T+ LI +C + A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
+ L EM G++PD LI+ + E ++ +A L + + ++ + +
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 565 FAEDGDLS 572
F ++G LS
Sbjct: 524 FWKEGRLS 531
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 186/411 (45%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K GL + K + +G +P++ + L + N +++ +++E M + G+ PN +
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++ + +CK G+V + G ++I P++V + TL+ +CK L A L+ M
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
+ V P+L Y L++G CK G + EA L M LSPD+ +Y LI C E ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYL 421
E+ L +M I+P + T ++ GY KE + AL+L E+ GV + + L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C AA L + G VP + Y L+++ K ++ +AL L +M++ I
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
P+ T+ L+ F GR A+ E + + LI G C + +A
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASR 570
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLT 592
D SY ++ ++ ++ M LQ ++ G PN L
Sbjct: 571 FFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV 621
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 35/249 (14%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E+ + F+K + PS + N L++G K ++Q + EM G+ PN TF+
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
L +C D+ G ++ +G PD+VTY LI ++ K+ + +A LY M
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 306 VLPD-----------------------------------LVTYTTLMNGLCKEGKVREAH 330
+ P+ V +T L+ GLC+ G + A
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+ F M G++PDI SY +++ + +E ++ ++ L +M+ GI P+ Q++ + Y
Sbjct: 570 RFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629
Query: 391 GKEGRLLSA 399
G + SA
Sbjct: 630 QANGYVKSA 638
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 102 CQSDSVS-ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCP 160
C D V+ A F +KN+ I P+S+ Y ++H A+ + E+
Sbjct: 385 CIEDQVAEANRLFQKMKNE-RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT--ASGVE 441
Query: 161 HSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
++ F LI Y V I+ + + + G P +V+ L++ K
Sbjct: 442 PNIITFSTLID-------GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + ++Y +M GI PN HTF L F K G + F ++ ++ + V +
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
LI C+ G + A + M + PD+ +Y +++ G +E ++ + L M+ G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Query: 341 LSPDIVSYNTLIFAYCKEGKMQES 364
+ P+++ L Y G ++ +
Sbjct: 615 ILPNLLVNQLLARFYQANGYVKSA 638
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%)
Query: 476 MVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKD 535
M+ R + P + Y L C G + L+DEM G+ P+ I + I C +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 536 VNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKY 595
+ +AE + K + + +Y+A+ + + + G++ + L K L PN +
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 596 MIHSLWKGME 605
++ K E
Sbjct: 310 LVDGFCKARE 319
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 228/487 (46%), Gaps = 14/487 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L H++ + LI+C C + + +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--GISHNLYTYSILINCF--CRRSQLSL 134
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
L K + +G++P IV+ N LLNG N I + +M +G P++ TF
Sbjct: 135 AL-----AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L H ++ + ++++ +G PDLVTY +++ CK+G ++ A L + M +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ P +V Y T+++ LC V +A LF M ++G+ P++V+YN+LI C G+ +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY--L 421
+ LL +M+ I P+ T ++ + KEG+L+ A L E+ + SI DI+ Y L
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK--RSIDPDIFTYSSL 367
Query: 422 IVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNI 481
I C +R A + E + P++ YN L++ CK V + + L EM R +
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 482 KPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEA 541
+ TY LI F A + +M+ G+LPD +L++G C V A
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 542 LLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL- 600
+ + + D +YN + + G + +L G PN +T M+
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 601 WKGMERK 607
KG++ +
Sbjct: 548 RKGLKEE 554
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 221/464 (47%), Gaps = 9/464 (1%)
Query: 140 NKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDV 199
N+ S A+ ++ ++VE+ P S F LI N A V L+ + +
Sbjct: 165 NRISDAVSLVGQMVEMGYQ-PDSF-TFNTLIHGLFRHNRASEAVALVD-------RMVVK 215
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G QP +V+ ++NGL K ID + ++M + I P +N + C +V+
Sbjct: 216 GCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDA 275
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ +G P++VTYN+LI C GR +DA L M R + P++VT++ L++
Sbjct: 276 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 335
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
KEGK+ EA +L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G+ K R+ + L E+ + G+ + Y LI Q A + +
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
++ DG +P + Y+ L++ LC V AL++ + + ++P + TY +I C G
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
+ + L + G+ P+ +++G+C + +A+AL ++ + D+ +YN
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ DGD + EL + F + T + + L G
Sbjct: 576 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDG 619
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 205/451 (45%), Gaps = 45/451 (9%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
+P Y ++V+ L A+ +L ++ E K P V ++ +I CN+ V
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVV-IYNTIIDAL--CNYKNVN 273
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
++ F + + G +P++V+ N L+ L ++ +M I PN T
Sbjct: 274 -----DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
F+ L F K G + + +++ + DPD+ TY++LI+ +C RL++A +++ +M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
++ P++VTY TL+ G CK +V E +LF M RGL + V+Y TLI + + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
++ + +M+ +G+ PD T I++ G G++ +AL + LQR
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR-------------- 494
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
S +E P + YN ++E +CK V D L + + +K
Sbjct: 495 -------------SKME--------PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P++ TY ++ FC G EA +L EM E G LPDS LI + + D + L
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + V NM DG L K
Sbjct: 594 IREMRSCRFVGDASTIGLVTNML-HDGRLDK 623
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 234/502 (46%), Gaps = 16/502 (3%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR +S AL FF + N K T + +++ LA + + +L ++ C
Sbjct: 50 LRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 160 PHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLN 219
S D+F +IS Y +VGL + + F + + G PS+ N +L+ LL N
Sbjct: 110 --SEDLFISVIS-------VYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGEN 160
Query: 220 CIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYN 279
I + VY +M R G PN T+N+L CKN VD L ++ +G PD V+Y
Sbjct: 161 RIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 280 TLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHR 339
T+ISS C+ G + + R + R P + Y L+NGLCKE + A +L MV +
Sbjct: 221 TVISSMCEVGLVKEG----RELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 340 GLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSA 399
G+SP+++SY+TLI C G+++ + S L +M+ G +P+ +T +V+G G A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 400 LNLVVELQR-FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
L+L ++ R FG+ + Y+ L+ C A S+ + + G P++ Y L+
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 459 SLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLP 518
K S+ A+ + ++M+ P++ Y ++ C + EA SL++ M + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 519 DSQICRVLINGYCMEKDVNKAEALLGFFAKKFQI-YDTESYNAVFNMFAEDGDLSKLMEL 577
I G C ++ AE + ++ + + +YN + + A+ + + L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 578 QKRFLRLGFAPNNLTCKYMIHS 599
+ G ++ T ++H
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHG 537
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 202/453 (44%), Gaps = 24/453 (5%)
Query: 102 CQSDSVSALTFFN------WVKNDLEI----KPTSSNYCLIVHILAWNNKFSFAMKMLCE 151
C D+VS T + VK E+ +P S Y +++ L + + A +++ E
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMRE 271
Query: 152 LVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFL 211
+VE K +V + LI+ CN G I +F + L G P+I + + L
Sbjct: 272 MVE--KGISPNVISYSTLINVL--CN-----SGQIELAFSFLTQMLKRGCHPNIYTLSSL 322
Query: 212 LNGLLKLNCIDQCWQVYEEMGR-IGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
+ G ++ +M R G+ PN +N L FC +G++ K +EE G
Sbjct: 323 VKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++ TY +LI+ + K+G L+ A Y++ M P++V YT ++ LC+ K +EA
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEM-MGNGIYPDTFTCQIIVQG 389
L M +P + ++N I C G++ ++ + +M + P+ T ++ G
Sbjct: 443 SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDG 502
Query: 390 YGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPS 449
K R+ A L E+ GV S Y+ L+ C P A L+ ++ DG P
Sbjct: 503 LAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPD 562
Query: 450 LEIYNELMESLCKCDSVADALLLKDEMV--DRNIKPSLSTYRALICCFCGIGRSGEAVSL 507
N ++ + CK A + D + R +P + +Y +I C + V L
Sbjct: 563 EITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVIL 622
Query: 508 MDEMLESGMLPDSQICRVLINGYCMEKDVNKAE 540
++ M+ +G++P VLIN + ++ D+ +A
Sbjct: 623 LERMISAGIVPSIATWSVLINCFILD-DIVRAH 654
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 171/366 (46%), Gaps = 18/366 (4%)
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
TF ++ +G VD V L++++ +GF + ++IS Y + G A ++ +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
P + Y +++ L E +++ + ++ M G P++ +YN L+ A CK K+
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQ-----GYGKEGRLLSALNLVVELQRFGVSISRD 416
+K LL EM G PD + ++ G KEGR L+ +RF +S
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELA--------ERFEPVVS-- 247
Query: 417 IYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEM 476
+Y+ LI LC+++ A L+ + + G P++ Y+ L+ LC + A +M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 477 VDRNIKPSLSTYRALI-CCFCGIGRSGEAVSLMDEMLES-GMLPDSQICRVLINGYCMEK 534
+ R P++ T +L+ CF G + +A+ L ++M+ G+ P+ L+ G+C
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLR-GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 535 DVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCK 594
++ KA ++ + + +Y ++ N FA+ G L + + + L G PN +
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 595 YMIHSL 600
M+ +L
Sbjct: 427 NMVEAL 432
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 143/333 (42%), Gaps = 6/333 (1%)
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
F +T+ +I G+++ YL + M + + ++++ + G A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
++F+R+ G P + YN ++ E ++Q + +M +G P+ FT ++++
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K ++ A L+VE+ G Y +I ++C+ L ER + P +
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVV 246
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
+YN L+ LCK A L EMV++ I P++ +Y LI C G+ A S + +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DTESYNAVFNMFAEDG 569
ML+ G P+ L+ G + A L + F + + +YN + F G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 570 DLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
++ K + + +G +PN T +I+ K
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + + L + +A K+ ++ E CP ++ + +L+ N
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQM-EQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL RE F G + S + N LL+G Q+ +M G P+ T
Sbjct: 514 GLTREIFMR-------GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 244 NILTHVFCKNGDVDKVNGFLEKIE--EEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
N++ +CK G ++ L+ + + PD+++Y +I C+ D L M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLF 333
++P + T++ L+N + VR AH F
Sbjct: 627 ISAGIVPSIATWSVLINCFILDDIVR-AHDQF 657
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 194/400 (48%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV + LL+ + K+ D E+M +G+ N +T+NI+ + C+ +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G+ P +VT N+L++ +C R+++A L M PD VT+TTL++GL +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y +I CK G+ + +LL +M I D
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
++ K + ALNL E+ G+ Y LI LC R A+ LL +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L DEM+ R+I P++ TY +LI FC R
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + M+ LPD LING+C K V L +++ + +T +Y +
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ F + D + K+ + G PN +T ++ L K
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 190/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N LL L +D+ ++ EM + P+ F+ L K D V F EK+E G
Sbjct: 39 NALLHLK-LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVS 97
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
+L TYN +I+ C++ +L+ A + M + P +VT +L+NG C ++ EA L
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+MV G PD V++ TL+ + K E+ +L+ M+ G PD T ++ G K
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G ALNL+ ++++ + IY +I +LC+ A +L + G P +
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
Y+ L+ LC +DA L +M++R I P++ T+ +LI F G+ EA L DEM+
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + P+ LING+CM +++A+ + K + D +YN + N F + +
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
MEL + R G N +T +IH ++
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 190/408 (46%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + +G+ PSIV+ N LLNG N I + + ++M +G P+T TF L H ++
Sbjct: 125 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 184
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
+ +E++ +G PDLVTY +I+ CK+G + A L M + + D+V Y+
Sbjct: 185 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYS 244
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
T+++ LCK V +A LF M ++G+ PD+ +Y++LI C G+ ++ LL +M+
Sbjct: 245 TVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER 304
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
I P+ T ++ + KEG+L+ A L E+ + + + Y+ LI C +R A
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ + +P + YN L+ CK V D + L +M R + + TY LI
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F A + +M+ G+ P+ L++G C + KA + + K D
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+YN + + G + +L G P+ + MI K
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/522 (24%), Positives = 235/522 (45%), Gaps = 47/522 (9%)
Query: 120 LEIKPTSSN---YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDC 176
+EI S N Y ++++ L ++ SFA+ +L ++++L S+ L++
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKL--GYGPSIVTLNSLLN----- 143
Query: 177 NWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGI 236
+ I E+ + +++G+QP V+ L++GL + N + + E M G
Sbjct: 144 --GFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 237 CPNTHTFNILTHVFCKNGDVDKVNGFLEKIEE---------------------------- 268
P+ T+ + + CK G+ D L K+E+
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 269 -------EGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+G PD+ TY++LIS C GR +DA L M R + P++VT+ +L++
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KEGK+ EA +LF M+ R + P+IV+YN+LI +C ++ E++ + M+ PD
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T ++ G+ K +++ + L ++ R G+ + Y LI Q + A + +++
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG P++ YN L++ LCK + A+++ + + ++P + TY + C G+
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
+ L + G+ PD +I+G+C + +A L + + D+ +YN +
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 562 FNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
DGD + EL K FA + T + L G
Sbjct: 562 IRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 10/333 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + N I+P Y ++ L ++S A ++L +++E + +V F
Sbjct: 259 ALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE--RKINPNVVTFNS 315
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A+ K G + E+ K F + + P+IV+ N L+NG + +D+ Q++
Sbjct: 316 LID-------AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
M P+ T+N L + FCK V + G + VTY TLI + +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
++A +++ M V P+++TY TL++GLCK GK+ +A +F + + PDI +Y
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N + CK GK+++ L + G+ PD ++ G+ K+G A L ++++
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
G Y+ LI A +D A+ L++ +
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 196/398 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N + + E+M +GI + +T++I + FC+ +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R++DA L M PD T+TTL++GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L +MV RG PD+V+Y T++ CK G + + +LL +M I +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ K + A++L E++ G+ + Y+ LI LC R A+ LL +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ +N L+++ K + +A L +EM+ R+I P TY LI FC R
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + M+ LP+ Q LING+C K V L +++ + +T +Y +
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
F + GD + K+ + + +T ++H L
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 216/477 (45%), Gaps = 12/477 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ + ++ +A NKF + + ++ L H + + I+C + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTL--GISHDLYTYSIFINC-------FCRR 131
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ + K + +G++P IV+ + LLNG I + ++M +G P+T TF
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
L H + + ++++ + G PDLVTY T+++ CK+G ++ A L M
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++V + T+++ LCK V A LF M +G+ P++V+YN+LI C G+ +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ LL M+ I P+ T ++ + KEG+L+ A L E+ + + Y+ LI
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C NR A + + + +P+++ YN L+ CKC V D + L EM R +
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ TY +I F G A + +M+ + + D +L++G C ++ A +
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ K + YN + + G + + +L F L P+ +T MI L
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL---FCSLSIKPDVVTYNTMISGL 545
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 212/451 (47%), Gaps = 13/451 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP + + ++H L +NK S A+ ++ ++V+ + C + + +++ K
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ--RGCQPDLVTYGTVVN-------GLCK 235
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
G I + K + ++V N +++ L K ++ ++ EM GI PN T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
+N L + C G + L + E+ +P++VT+N LI ++ K+G+L +A L+ M
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+R++ PD +TY L+NG C ++ EA Q+F MV + P+I +YNTLI +CK +++
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+ L EM G+ +T T I+QG+ + G SA + ++ V Y L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC + A + + + + ++ IYN ++E +CK V +A D +IK
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW---DLFCSLSIK 532
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P + TY +I C EA L +M E G LP+S LI + D + L
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
+ + D + + V NM DG L K
Sbjct: 593 IKEMRSSGFVGDASTISLVTNML-HDGRLDK 622
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 193/393 (49%)
Query: 211 LLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEG 270
L N L + +D ++ +M + P+ FN L K + V E+++ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
DL TY+ I+ +C++ +L+ A + M + PD+VT ++L+NG C ++ +A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
L +MV G PD ++ TLI K E+ +L+ +M+ G PD T +V G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K G + ALNL+ +++ + + I++ +I +LC+ A L + G P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
YN L+ LC +DA L M+++ I P++ T+ ALI F G+ EA L +E
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M++ + PD+ +LING+CM +++A+ + F K + + ++YN + N F +
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ +EL + + G N +T +I ++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 228/513 (44%), Gaps = 53/513 (10%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRE 188
Y + ++ ++ S A+ +L ++++L + D+++ + N Y I +
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYE--------PDIVTLSSLLN-GYCHSKRISD 171
Query: 189 SFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTH 248
+ + +++G++P + L++GL N + + ++M + G P+ T+ + +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 249 VFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLP 308
CK GD+D L K+E ++V +NT+I S CK + A L+ M + + P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 309 DLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLL 368
++VTY +L+N LC G+ +A +L M+ + ++P++V++N LI A+ KEGK+ E++ L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 369 YEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRD------IYDYLI 422
EM+ I PDT T +++ G+ RL A Q F +S+D Y+ LI
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAK------QMFKFMVSKDCLPNIQTYNTLI 405
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
C+ R L + Q G V + Y +++ + A ++ +MV +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 483 PSLSTYRALICCFCGIGRSGEAV-------------------SLMDEMLESGML------ 517
+ TY L+ C G+ A+ ++++ M ++G +
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 518 -------PDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
PD +I+G C ++ + +A+ L + + ++ +YN + D D
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ EL K GF + T + + L G
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNMLHDG 618
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 13/275 (4%)
Query: 122 IKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYV 181
I P + Y L+++ +N+ A +M +V KDC ++ + LI+ +
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS--KDCLPNIQTYNTLIN-------GFC 409
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K + + + FR+ G + V+ ++ G + D V+++M + +
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
T++IL H C G +D + +++ + ++ YNT+I CK G++ +A+ L+ +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKM 361
++ PD+VTY T+++GLC + ++EA LF +M G P+ +YNTLI A ++
Sbjct: 530 ---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 362 QESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRL 396
S L+ EM +G D T ++ +GRL
Sbjct: 587 AASAELIKEMRSSGFVGDASTISLVTNML-HDGRL 620
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 178/370 (48%), Gaps = 1/370 (0%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
GL+ + FRK +D+GF+P++++ L++GL K I Q +++ EEM R G PN +T
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 244 NILTHVFCKNGDVDKV-NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
L CK G +K FL+ + + + P++ TY ++I YCK+ +LN A L+ M
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ + P++ TYTTL+NG CK G A++L + M G P+I +YN I + CK+ +
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ LL + G+ D T I++Q K+ + AL + + G + + LI
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILI 505
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A C+ + + L + + G +P+ E Y ++ CK + AL M
Sbjct: 506 AAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCV 565
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
P TY +LI C EA L + M++ G+ P L YC D A L
Sbjct: 566 PDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Query: 543 LGFFAKKFQI 552
L KK I
Sbjct: 626 LEPLDKKLWI 635
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 212/424 (50%), Gaps = 1/424 (0%)
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
+ ++G + E+ + G PS ++ N +L ++L I+ V++EM G+ P+
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
+ ++ ++ ++G + + + +L + + GF PD T ++++ C+ G +N A + +R
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M P+L+ +T+L++GLCK+G +++A ++ MV G P++ ++ LI CK G
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 360 KMQESKSLLYEMMGNGIY-PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIY 418
+++ L +++ + Y P+ T ++ GY KE +L A L ++ G+ + + Y
Sbjct: 337 WTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 419 DYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVD 478
LI C+ A L+ +G +G++P++ YN ++SLCK +A L ++
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Query: 479 RNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
++ TY LI C +A++ M ++G D ++ +LI +C +K + +
Sbjct: 457 CGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKE 516
Query: 539 AEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIH 598
+E L I E+Y ++ + + ++GD+ ++ R G P++ T +I
Sbjct: 517 SERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Query: 599 SLWK 602
L K
Sbjct: 577 GLCK 580
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I ++ F + GF+ + N L+ + + + ++++ + +G+ P T+
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ +CK GD+D + ++ G PD TY +LIS CKK +++A LY M R
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 306 VLPDLVTYTTL--------------------------------MNGLCKEGKVREAHQLF 333
+ P VT TL + LC E KV A F
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFF 658
Query: 334 HRMVHRGLSPDIVSYNTLIFAYCKEGK 360
+++ + S D V+ A + GK
Sbjct: 659 QKLLEKDSSADRVTLAAFTTACSESGK 685
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 72/152 (47%)
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
E+ ++ + + + +A+ + +M ++ + PS T ++ +G A ++ DE
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDE 207
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
M G++PDS ++++ G + + +A+ L ++ I D + + E+G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+++ + ++ + LGF PN + +I L K
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 299
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 466 VADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRV 525
AD+LL + N++ + R ++ F IGR EAV ++ +M G+ P S
Sbjct: 133 TADSLL-----ANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNC 187
Query: 526 LINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLG 585
++ + AE + + + + D+ SY + DG + + ++ G
Sbjct: 188 VLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG 247
Query: 586 FAPNNLTCKYMIHSL 600
F P+N TC ++ +L
Sbjct: 248 FIPDNATCTLILTAL 262
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 197/400 (49%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV N LL+ + K+N D + E M + I + +++NIL + FC+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G++PD+VT ++L++ YC R+++A L M+ P+ VT+ TL++GL
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV RG PD+ +Y T++ CK G + + SLL +M I D
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ + ALNL E+ G+ + Y+ LI LC R A+ LL +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSG 502
+ P++ ++ L+++ K + +A L DEM+ R+I P + TY +LI FC R
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 503 EAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVF 562
EA + + M+ P+ LI G+C K V + L +++ + +T +YN +
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 563 NMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
+ GD ++ K+ + G P+ +T ++ L K
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 211/453 (46%), Gaps = 35/453 (7%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ + + +QP+ V+ N L++GL N + + + M G P+ T+
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 246 LTHVFCKNGDVDKVNGFLEKIEE-----------------------------------EG 270
+ + CK GD+D L+K+E+ +G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 271 FDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
P++VTYN+LI C GR +DA L M R + P++VT++ L++ KEGK+ EA
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 331 QLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGY 390
+L+ M+ R + PDI +Y++LI +C ++ E+K + M+ +P+ T +++G+
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 391 GKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSL 450
K R+ + L E+ + G+ + Y+ LI L Q A + +++ DG P +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 451 EIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDE 510
Y+ L++ LCK + AL++ + + ++P + TY +I C G+ + L
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 511 MLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGD 570
+ G+ P+ I +I+G+C + +A+AL + + ++ +YN + DGD
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 571 LSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ EL K GF + T +I+ L G
Sbjct: 586 KAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 212/454 (46%), Gaps = 10/454 (2%)
Query: 120 LEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWA 179
+E +P + + ++H L +NK S A+ ++ +V + C + + +++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV--ARGCQPDLFTYGTVVN-------G 229
Query: 180 YVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPN 239
K G I + +K + +V +++ L ++ ++ EM GI PN
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 240 THTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYR 299
T+N L C G + L + E +P++VT++ LI ++ K+G+L +A LY
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 300 IMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEG 359
M +R++ PD+ TY++L+NG C ++ EA +F M+ + P++V+YNTLI +CK
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
+++E L EM G+ +T T ++QG + G A + ++ GV Y
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
L+ LC+ + A + E + + P + YN ++E +CK V D L + +
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+KP++ Y +I FC G EA +L EM E G LP+S LI + D +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSK 573
L+ + D + + V NM DG L K
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINML-HDGRLEK 622
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 188/391 (48%), Gaps = 1/391 (0%)
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
N LL L +D ++ EM + P+ FN L K D V E+++
Sbjct: 54 NVLLDLK-LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS 112
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQL 332
DL +YN LI+ +C++ +L A + M + PD+VT ++L+NG C ++ EA L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 333 FHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGK 392
+M P+ V++NTLI K E+ +L+ M+ G PD FT +V G K
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 393 EGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEI 452
G + AL+L+ ++++ + IY +I ALC A +L + G P++
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 453 YNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
YN L+ LC +DA L +M++R I P++ T+ ALI F G+ EA L DEM+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 513 ESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLS 572
+ + PD LING+CM +++A+ + K + +YN + F + +
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 573 KLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ MEL + + G N +T +I L++
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 164/339 (48%), Gaps = 10/339 (2%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
AL F + N I+P Y ++ L ++S A ++L +++E + +V F
Sbjct: 274 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSA 330
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVY 228
LI A+VK G + E+ K + + + P I + + L+NG + +D+ ++
Sbjct: 331 LID-------AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 229 EEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKK 288
E M PN T+N L FCK V++ ++ + G + VTYNTLI +
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 289 GRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSY 348
G + A +++ M V PD++TY+ L++GLCK GK+ +A +F + + PDI +Y
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 349 NTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQR 408
N +I CK GK+++ L + G+ P+ ++ G+ ++G A L E++
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 409 FGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYV 447
G + Y+ LI A +D A+ L++ + G+V
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 1/149 (0%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTH 241
K G + ++ F +P I + N ++ G+ K ++ W ++ + G+ PN
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 242 TFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIM 301
+ + FC+ G ++ + +++E+G P+ TYNTLI + + G + L + M
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Query: 302 YRRNVLPDLVTYTTLMNGLCKEGKVREAH 330
+ D T + ++N L +G++ +++
Sbjct: 597 RSCGFVGDASTISMVINML-HDGRLEKSY 624
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 179/348 (51%), Gaps = 3/348 (0%)
Query: 195 KTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNG 254
K + G++P +V+ + L+NG + N + + +M +G P+ +N + CK G
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 188
Query: 255 DVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYT 314
V+ +++E +G D VTYN+L++ C GR +DA L R M R+++P+++T+T
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 315 TLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN 374
+++ KEGK EA +L+ M R + PD+ +YN+LI C G++ E+K +L M+
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 375 GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAA 434
G PD T ++ G+ K R+ L E+ + G+ Y+ +I Q RP AA
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 435 TSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICC 494
+ R+ P++ Y+ L+ LC V AL+L + M I+ ++TY +I
Sbjct: 369 QEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
C IG +A L + G+ PD +I+G+C ++ +K++ L
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 189/415 (45%), Gaps = 3/415 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
+ E F K + PSIV + +L+ + K D ++ M GI + +++NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + C+ + K+ + G++PD+VT ++LI+ +C+ R+ DA L M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
PD+V Y T+++G CK G V +A +LF RM G+ D V+YN+L+ C G+ ++
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 366 SLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVAL 425
L+ +M+ I P+ T ++ + KEG+ A+ L E+ R V Y+ LI L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 426 CQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSL 485
C R A +L+ + G +P + YN L+ CK V + L EM R +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 486 STYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGF 545
TY +I + GR A + M P+ + +L+ G CM V KA L
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 546 FAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
K D +YN V + + G++ +L + G P+ ++ MI
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 160/368 (43%), Gaps = 41/368 (11%)
Query: 238 PNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYL 297
P+ F+ + K+ + D V +E G DL +YN +I+ C+ R A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 298 YRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCK 357
M + PD+VT ++L+NG C+ +V +A L +M G PD+V YNT+I CK
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 358 EGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDI 417
G + ++ L M +G+ D T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVT----------------------------------- 211
Query: 418 YDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV 477
Y+ L+ LC R A L+ + VP++ + +++ K ++A+ L +EM
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 478 DRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVN 537
R + P + TY +LI C GR EA ++D M+ G LPD LING+C K V+
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 538 KAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMI 597
+ L A++ + DT +YN + + + G E+ F R+ PN T ++
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILL 388
Query: 598 HSL---WK 602
+ L W+
Sbjct: 389 YGLCMNWR 396
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%)
Query: 291 LNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNT 350
L + L+ M + LP +V ++ +++ + K LFH M G+ D+ SYN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 351 LIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFG 410
+I C+ + + S++ +MM G PD T ++ G+ + R+ A++LV +++ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 411 VSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADAL 470
IY+ +I C+ A L +R+ +DG YN L+ LC +DA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 471 LLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGY 530
L +MV R+I P++ T+ A+I F G+ EA+ L +EM + PD LING
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 531 CMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNN 590
CM V++A+ +L K + D +YN + N F + + + +L + + G +
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 591 LTCKYMIHSLWKG 603
+T +I ++
Sbjct: 350 ITYNTIIQGYFQA 362
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+I P + ++ + KFS AMK+ E+ D V + LI+
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD--PDVFTYNSLIN-------GL 289
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
G + E+ + + G P +V+ N L+NG K +D+ +++ EM + G+ +T
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
T+N + + + G D +++ P++ TY+ L+ C R+ A L+
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + D+ TY +++G+CK G V +A LF + +GL PD+VSY T+I +C++ +
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 361 MQESKSLLYEMMGNGIYP 378
+S L +M +G+ P
Sbjct: 467 WDKSDLLYRKMQEDGLLP 484
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 207/419 (49%), Gaps = 1/419 (0%)
Query: 186 IRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
I E+ + +++G+QP V+ L++GL + N + + E M G P+ T+
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRN 305
+ + CK G+ D L K+E+ + D+V YNT+I CK ++DAF L+ M +
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 306 VLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESK 365
+ PD+ TY L++ LC G+ +A +L M+ + ++PD+V +N LI A+ KEGK+ E++
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 366 SLLYEMM-GNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVA 424
L EM+ +PD +++G+ K R+ + + E+ + G+ + Y LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 425 LCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPS 484
Q A + +++ DG P + YN L++ LC +V AL++ + M R++K
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 485 LSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLG 544
+ TY +I C G+ + L + G+ P+ +++G+C + +A+AL
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 545 FFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ + ++ +YN + DGD + EL K GFA + T + + L G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDG 579
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 197/406 (48%), Gaps = 9/406 (2%)
Query: 203 PSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGF 262
PSIV + LL+ + K+N D + E+M +GI N +T++I + FC+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 263 LEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK 322
L K+ + G+ P +VT N+L++ +C R+++A L M PD VT+TTL++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 323 EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFT 382
K EA L RMV +G PD+V+Y +I CK G+ + +LL +M I D
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 383 CQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIG 442
I+ G K + A +L +++ G+ Y+ LI LC R A+ LL +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 443 QDGYVPSLEIYNELMESLCKCDSVADALLLKDEMV-DRNIKPSLSTYRALICCFCGIGRS 501
+ P L +N L+++ K + +A L DEMV ++ P + Y LI FC R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAV 561
E + + EM + G++ ++ LI+G+ +D + A+ + D +YN +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 562 FNMFAEDGDLSKLM----ELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
+ +G++ + +QKR ++L +T MI +L K
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDI----VTYTTMIEALCKA 474
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 179/381 (46%), Gaps = 1/381 (0%)
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+D ++ +M + P+ F+ L K D V E+++ G +L TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
I+ +C++ +L+ A + M + P +VT +L+NG C ++ EA L +MV G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 341 LSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSAL 400
PD V++ TL+ + K E+ +L+ M+ G PD T ++ G K G AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 401 NLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESL 460
NL+ ++++ + IY+ +I LC+ A L ++ G P + YN L+ L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 461 CKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGM-LPD 519
C +DA L +M+++NI P L + ALI F G+ EA L DEM++S PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 520 SQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQK 579
LI G+C K V + + +++ + +T +Y + + F + D + K
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 580 RFLRLGFAPNNLTCKYMIHSL 600
+ + G P+ +T ++ L
Sbjct: 416 QMVSDGVHPDIMTYNILLDGL 436
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 166/323 (51%), Gaps = 12/323 (3%)
Query: 109 ALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQD 168
A FN ++ IKP Y ++ L ++S A ++L +++E K+ + F
Sbjct: 269 AFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE--KNINPDLVFFNA 325
Query: 169 LISCTEDCNWAYVKVGLIRESFKTFRKTLDVGF-QPSIVSCNFLLNGLLKLNCIDQCWQV 227
LI A+VK G + E+ K + + + P +V+ N L+ G K +++ +V
Sbjct: 326 LID-------AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 228 YEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCK 287
+ EM + G+ NT T+ L H F + D D +++ +G PD++TYN L+ C
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCN 438
Query: 288 KGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVS 347
G + A ++ M +R++ D+VTYTT++ LCK GKV + LF + +G+ P++V+
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 348 YNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQ 407
Y T++ +C++G +E+ +L EM +G P++ T +++ ++G ++ L+ E++
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 408 RFGVSISRDIYDYLIVALCQDNR 430
G + + L+ + D R
Sbjct: 559 SCGFAGDASTFG-LVTNMLHDGR 580
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 166/350 (47%), Gaps = 2/350 (0%)
Query: 257 DKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTL 316
D + F + ++ F P +V ++ L+S+ K + + L M + +L TY+
Sbjct: 58 DAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 317 MNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGI 376
+N C+ ++ A + +M+ G P IV+ N+L+ +C ++ E+ +L+ +M+ G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 377 YPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATS 436
PDT T +V G + + A+ LV + G Y +I LC+ P A +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 437 LLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFC 496
LL ++ + + IYN +++ LCK + DA L ++M + IKP + TY LI C C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 497 GIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIY-DT 555
GR +A L+ +MLE + PD LI+ + E + +AE L K + D
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 556 ESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGME 605
+YN + F + + + ME+ + + G N +T +IH ++ +
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%)
Query: 325 KVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQ 384
K+ +A LF MV P IV ++ L+ A K K SL +M GI + +T
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 385 IIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQD 444
I + + + +L AL ++ ++ + G S + L+ C NR A +L++++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 445 GYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEA 504
GY P + L+ L + + ++A+ L + MV + +P L TY A+I C G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 505 VSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNM 564
++L+++M + + D I +I+G C K ++ A L K D +YN + +
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 565 FAEDGDLSKLMELQKRFLRLGFAPN 589
G S L L P+
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPD 319
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 107/241 (44%)
Query: 360 KMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYD 419
K+ ++ L +M+ + +P ++ K + ++L ++Q G+S + Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 420 YLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDR 479
I C+ ++ A ++L ++ + GY PS+ N L+ C + +++A+ L D+MV+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 480 NIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA 539
+P T+ L+ ++ EAV+L++ M+ G PD +ING C + + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 540 EALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
LL K D YN + + + + +L + G P+ T +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 600 L 600
L
Sbjct: 295 L 295
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%)
Query: 407 QRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSV 466
+ F + S D + L + QD + A L + + PS+ +++L+ ++ K +
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 91
Query: 467 ADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVL 526
+ L ++M + I +L TY I FC + A++++ +M++ G P L
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 527 INGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGF 586
+NG+C +++A AL+ + DT ++ + + + S+ + L +R + G
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 587 APNNLTCKYMIHSLWKGME 605
P+ +T +I+ L K E
Sbjct: 212 QPDLVTYGAVINGLCKRGE 230
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 202/400 (50%), Gaps = 5/400 (1%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
+PS+ N LL +K ++ +Y++M GI P T+TFN+L C + VD
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
+++ E+G P+ T+ L+ YCK G + L M VLP+ V Y T+++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGN---GI-Y 377
+EG+ ++ ++ +M GL PDIV++N+ I A CKEGK+ ++ + +M + G+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
P++ T ++++G+ K G L A L ++ S Y+ + L + + A ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
L+++ G PS+ YN LM+ LCK ++DA + M + P TY L+ +C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+G+ A SL+ EM+ + LP++ C +L++ +++AE LL +K DT +
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAP-NNLTCKYM 596
N + + G+L K +E+ K G A NL Y+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 255/585 (43%), Gaps = 81/585 (13%)
Query: 49 YNFLPETQNPNKIVDLICSSLKKGDSHLTLLQNDLKPLLPHLGAHEISRVLLRCQSDSV- 107
+ LP N IV C + DS + + + L+P + SR+ C+ V
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFN-SRISALCKEGKVL 269
Query: 108 SALTFFNWVKNDLEI---KPTSSNYCLIVHILAWNNKFSFAMKMLCE--LVELVKDCPHS 162
A F+ ++ D + +P S Y L+ +K C+ L+E K S
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLM-------------LKGFCKVGLLEDAKTLFES 316
Query: 163 VDVFQDLISCTEDCNW--AYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNC 220
+ DL S W V+ G E+ ++ D G PSI S N L++GL KL
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376
Query: 221 IDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNT 280
+ + M R G+CP+ T+ L H +C G VD L+++ P+ T N
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 281 LISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRG 340
L+ S K GR+++A L R M + D VT +++GLC G++ +A ++ M G
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 341 LS-----------------------PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY 377
+ PD+++Y+TL+ CK G+ E+K+L EMMG +
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 378 PDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSL 437
PD+ I + + K+G++ SA ++ ++++ G S + Y+ LI+ L N+ F L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 438 LERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCG 497
++ + + G P++ YN ++ LC+ + V DA L DEM+ +NI P++ +++ LI FC
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 498 IGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTES 557
+ + E+ E+ + IC + E L
Sbjct: 677 V----PDFDMAQEVFETAV----SIC-------------GQKEGL--------------- 700
Query: 558 YNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWK 602
Y+ +FN G L K EL + L GF K ++ SL K
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK 745
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 226/524 (43%), Gaps = 39/524 (7%)
Query: 110 LTFFNWVKNDL---EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVF 166
+ F +W+ D+ I P + + L++ L ++ A ++ E+ E K C + F
Sbjct: 128 VEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPE--KGCKPNEFTF 185
Query: 167 QDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQ 226
L+ Y K GL + + G P+ V N +++ + D +
Sbjct: 186 GILVR-------GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK 238
Query: 227 VYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGF----DPDLVTYNTLI 282
+ E+M G+ P+ TFN CK G V + +E + + P+ +TYN ++
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+CK G L DA L+ + + L L +Y + GL + GK EA + +M +G+
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P I SYN L+ CK G + ++K+++ M NG+ PD T ++ GY G++ +A +L
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
+ E+ R + + L+ +L + R A LL ++ + GY N +++ LC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 463 CDSVADAL-----------------------LLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ A+ L+ D +++ N P L TY L+ C G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYN 559
R EA +L EM+ + PDS + I+ +C + ++ A +L KK E+YN
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 560 AVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKG 603
++ + ++ L G +PN T I L +G
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 170/358 (47%), Gaps = 30/358 (8%)
Query: 182 KVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEM--------GR 233
K+G I E+ + RK + G+ V+CN +++GL +D+ ++ + M G
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGN 502
Query: 234 IG---------------ICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTY 278
+G P+ T++ L + CK G + ++ E PD V Y
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 279 NTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVH 338
N I +CK+G+++ AF + + M ++ L TY +L+ GL + ++ E H L M
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Query: 339 RGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLS 398
+G+SP+I +YNT I C+ K++++ +LL EMM I P+ F+ + +++ + K +
Sbjct: 623 KGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----VP 678
Query: 399 ALNLVVELQRFGVSI---SRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNE 455
++ E+ VSI +Y + L + AT LLE + G+ +Y +
Sbjct: 679 DFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKD 738
Query: 456 LMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLE 513
L+ESLCK D + A + +M+DR + +I +G EA S D+M+E
Sbjct: 739 LVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 153 VELVKDCPHSVDVFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLL 212
+ LV D + DLI+ + N K G E+ F + + QP V+ N +
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLN-GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 213 NGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFD 272
+ K I ++V ++M + G + T+N L + +++G +++++E+G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGIS 626
Query: 273 PDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCK---------- 322
P++ TYNT I C+ ++ DA L M ++N+ P++ ++ L+ CK
Sbjct: 627 PNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV 686
Query: 323 ------------------------EGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKE 358
G++ +A +L ++ RG Y L+ + CK+
Sbjct: 687 FETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 359 GKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
+++ + +L++M+ G D ++ G GK G
Sbjct: 747 DELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMG 782
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 20/257 (7%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+++P S Y + +H K S A ++L ++ + K C S++ + LI N +
Sbjct: 554 KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK--KGCHKSLETYNSLILGLGIKNQIF 611
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
GL+ E + G P+I + N + L + ++ + +EM + I PN
Sbjct: 612 EIHGLMDE-------MKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNV 664
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKI-----EEEGFDPDLVTYNTLISSYCKKGRLNDAF 295
+F L FCK D D E ++EG Y+ + + G+L A
Sbjct: 665 FSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKAT 718
Query: 296 YLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAY 355
L + R Y L+ LCK+ ++ A + H+M+ RG D + +I
Sbjct: 719 ELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Query: 356 CKEGKMQESKSLLYEMM 372
K G +E+ S +MM
Sbjct: 779 GKMGNKKEANSFADKMM 795
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 199/419 (47%), Gaps = 9/419 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P+ ++ ++ ++A NKF + + ++ L H + F LI C + +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL--GISHDLYSFTILIHC-------FCRC 127
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
+ + K + +GF+PSIV+ LLNG + N + + + M G PN +
Sbjct: 128 SRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + + CKN D++ +E++G D VTYNTLIS GR DA L R M +
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
R + P+++ +T L++ KEG + EA L+ M+ R + P++ +YN+LI +C G + +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+K + M+ G +PD T ++ G+ K R+ + L E+ G+ Y+ LI
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
CQ + A + R+ G P + YN L++ LC + AL++ +++ +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
+ TY +I C + EA L + G+ PD+ +I+G C + +A+ L
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 195/421 (46%), Gaps = 1/421 (0%)
Query: 188 ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILT 247
++F F + L PSIV +L + K+N D +Y +M +GI + ++F IL
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H FC+ + L K+ + GF P +VT +L++ +C+ R +A L M +
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
P++V Y T++NGLCK + A ++F+ M +G+ D V+YNTLI G+ ++ L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +M+ I P+ ++ + KEG LL A NL E+ R V + Y+ LI C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
A + + + G P + YN L+ CK V D + L EM + + T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI +C G+ A + + M++ G+ PD +L++ C + KA ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL-WKGMER 606
K D +YN + L + L + R G P+ + MI L KG++R
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 607 K 607
+
Sbjct: 482 E 482
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 147/275 (53%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G ++ + R + P+++ L++ +K + + +Y+EM R + PN T+
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N L + FC +G + + + +G PD+VTYNTLI+ +CK R+ D L+ M
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
+ ++ D TY TL++G C+ GK+ A ++F+RMV G+SPDIV+YN L+ C GK+++
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ ++ ++ + + D T II+QG + +L A L L R GV Y +I
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELME 458
LC+ A L R+ +DG++PS IY+E +
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 142/289 (49%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G + V+ N L++GL ++ +M + I PN F L F K G++ +
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
+++ P++ TYN+LI+ +C G L DA Y++ +M + PD+VTY TL+ G
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
CK +V + +LF M ++GL D +YNTLI YC+ GK+ ++ + M+ G+ PD
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T I++ G++ AL +V +LQ+ + + Y+ +I LC+ ++ A L
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTY 488
+ + G P Y ++ LC+ +A L M + PS Y
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 6/369 (1%)
Query: 217 KLNCI--DQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPD 274
+L+CI D + ++ EM + P+ F + V K D V K+E G D
Sbjct: 54 ELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 113
Query: 275 LVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFH 334
L ++ LI +C+ RL+ A L M + P +VT +L+NG C+ + +EA L
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 335 RMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEG 394
M G P++V YNT+I CK + + + Y M GI D T ++ G G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 395 RLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYN 454
R A L+ ++ + + + + LI ++ A +L + + + VP++ YN
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 455 ELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLES 514
L+ C + DA + D MV + P + TY LI FC R + + L EM
Sbjct: 294 SLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 515 GMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKL 574
G++ D+ LI+GYC +N A+ + D +YN + + +G + K
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 575 M----ELQK 579
+ +LQK
Sbjct: 414 LVMVEDLQK 422
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 70/345 (20%)
Query: 290 RLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYN 349
+ +DAF L+ M + +P +V +T ++ + K K L+H+M + G+S D+ S+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 350 TLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRF 409
LI +C+ ++ + +LL +MM G P T ++ G+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF------------------- 159
Query: 410 GVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK------- 462
CQ NR A SL++ + G+VP++ IYN ++ LCK
Sbjct: 160 ----------------CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 463 -------------CDSV---------------ADALLLKDEMVDRNIKPSLSTYRALICC 494
D+V DA L +MV R I P++ + ALI
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 495 FCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYD 554
F G EA +L EM+ ++P+ LING+C+ + A+ + K D
Sbjct: 264 FVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPD 323
Query: 555 TESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHS 599
+YN + F + + M+L G + T +IH
Sbjct: 324 VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 129 YCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDV--FQDLISCTEDCNWAYVKVGLI 186
Y ++H K + A K+ +V DC S D+ + L+ C CN ++ L+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMV----DCGVSPDIVTYNILLDCL--CNNGKIEKALV 415
Query: 187 R-ESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNI 245
E + + +DV I++ N ++ GL + + + + W ++ + R G+ P+ +
Sbjct: 416 MVEDLQ--KSEMDV----DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 246 LTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSY 285
+ C+ G + + +++E+GF P Y+ + +
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 249/537 (46%), Gaps = 46/537 (8%)
Query: 99 LLRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKD 158
LL + +++ F+W + + + Y +++ L N +F ++L ++ KD
Sbjct: 84 LLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQM----KD 139
Query: 159 CPHSVDVFQD--LISCTEDCNWAYVKVGLIRESFKTFRKTLDV-GFQPSIVSCNFLLNGL 215
VF++ IS D Y K G ++ + + +V +P+ S N +L L
Sbjct: 140 ---EGIVFKESLFISIMRD----YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEIL 192
Query: 216 LKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDL 275
+ NC V+ +M I P TF ++ FC ++D L + + G P+
Sbjct: 193 VSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS 252
Query: 276 VTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
V Y TLI S K R+N+A L M+ +PD T+ ++ GLCK ++ EA ++ +R
Sbjct: 253 VIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNR 312
Query: 336 MVHRGLSPD-------------------------------IVSYNTLIFAYCKEGKMQES 364
M+ RG +PD IV +NTLI + G++ ++
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 365 KSLLYEMMGN-GIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
K++L +M+ + GI PD T ++ GY KEG + AL ++ +++ G + Y L+
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
C+ + A ++L + DG P+ +N L+ + CK + +A+ + EM + KP
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALL 543
+ T+ +LI C + A+ L+ +M+ G++ ++ LIN + ++ +A L+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 544 GFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ D +YN++ G++ K L ++ LR G AP+N++C +I+ L
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 216/478 (45%), Gaps = 14/478 (2%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P S Y ++H L+ N+ + A+++L E+ + C + F D+I K
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEM--FLMGCVPDAETFNDVI-------LGLCKF 300
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
I E+ K + L GF P ++ +L+NGL K+ +D ++ + + P F
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIF 356
Query: 244 NILTHVFCKNGDVDKVNGFL-EKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
N L H F +G +D L + + G PD+ TYN+LI Y K+G + A + M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
+ P++ +YT L++G CK GK+ EA+ + + M GL P+ V +N LI A+CKE ++
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
E+ + EM G PD +T ++ G + + AL L+ ++ GV + Y+ LI
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
A + A L+ + G YN L++ LC+ V A L ++M+
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 483 PSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEAL 542
PS + LI C G EAV EM+ G PD LING C + +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 543 LGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
+ DT ++N + + + G + L + GF PN+ T ++ S+
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 182/370 (49%), Gaps = 8/370 (2%)
Query: 123 KPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVK 182
KP + ++H + + A +L ++V P V + LI + Y K
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP-DVCTYNSLI-------YGYWK 401
Query: 183 VGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHT 242
GL+ + + + G +P++ S L++G KL ID+ + V EM G+ PNT
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 243 FNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMY 302
FN L FCK + + ++ +G PD+ T+N+LIS C+ + A +L R M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 303 RRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQ 362
V+ + VTY TL+N + G+++EA +L + MV +G D ++YN+LI C+ G++
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 363 ESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLI 422
+++SL +M+ +G P +C I++ G + G + A+ E+ G + ++ LI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 423 VALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIK 482
LC+ R ++ ++ +G P +N LM LCK V DA LL DE ++
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 483 PSLSTYRALI 492
P+ T+ L+
Sbjct: 702 PNHRTWSILL 711
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 175/339 (51%)
Query: 200 GFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKV 259
G P + + N L+ G K + +V +M G PN +++ IL FCK G +D+
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 260 NGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNG 319
L ++ +G P+ V +N LIS++CK+ R+ +A ++R M R+ PD+ T+ +L++G
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 320 LCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPD 379
LC+ +++ A L M+ G+ + V+YNTLI A+ + G+++E++ L+ EM+ G D
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
Query: 380 TFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLE 439
T +++G + G + A +L ++ R G + S + LI LC+ A +
Sbjct: 564 EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Query: 440 RIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIG 499
+ G P + +N L+ LC+ + D L + ++ I P T+ L+ C G
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Query: 500 RSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNK 538
+A L+DE +E G +P+ + +L+ ++ +++
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 2/400 (0%)
Query: 202 QPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNG 261
QP + + N L+NG K+N ID +V + M P+T T+NI+ C G +D
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 262 FLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLC 321
L ++ + P ++TY LI + +G +++A L M R + PD+ TY T++ G+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 322 KEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTF 381
KEG V A ++ + +G PD++SYN L+ A +GK +E + L+ +M P+
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 382 TCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERI 441
T I++ ++G++ A+NL+ ++ G++ YD LI A C++ R A LE +
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 442 GQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRS 501
DG +P + YN ++ +LCK AL + ++ + P+ S+Y + G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 502 GEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKA-EALLGFFAKKFQIYDTESYNA 560
A+ ++ EM+ +G+ PD +I+ C E V++A E L+ + +F +YN
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP-SVVTYNI 513
Query: 561 VFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSL 600
V F + + + + + + G PN T +I +
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 172/346 (49%)
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + K + L QP++++ L+ + +D+ ++ +EM G+ P+ T+
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
N + CK G VD+ + +E +G +PD+++YN L+ + +G+ + L M+
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 304 RNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQE 363
P++VTY+ L+ LC++GK+ EA L M +GL+PD SY+ LI A+C+EG++
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 364 SKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIV 423
+ L M+ +G PD ++ K G+ AL + +L G S + Y+ +
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 424 ALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKP 483
AL A ++ + +G P YN ++ LC+ V +A L +M P
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 484 SLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLING 529
S+ TY ++ FC R +A+++++ M+ +G P+ VLI G
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 192/392 (48%), Gaps = 9/392 (2%)
Query: 121 EIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAY 180
+ P + Y +++ L K A+K+L +L L +C +V + LI T
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL--LSDNCQPTVITYTILIEAT------- 238
Query: 181 VKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNT 240
+ G + E+ K + L G +P + + N ++ G+ K +D+ +++ + G P+
Sbjct: 239 MLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 241 HTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRI 300
++NIL G ++ + K+ E DP++VTY+ LI++ C+ G++ +A L ++
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 301 MYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGK 360
M + + PD +Y L+ C+EG++ A + M+ G PDIV+YNT++ CK GK
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 361 MQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDY 420
++ + ++ G P++ + + G + AL++++E+ G+ Y+
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 421 LIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRN 480
+I LC++ A LL + + PS+ YN ++ CK + DA+ + + MV
Sbjct: 479 MISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Query: 481 IKPSLSTYRALICCFCGIGRSGEAVSLMDEML 512
+P+ +TY LI G EA+ L ++++
Sbjct: 539 CRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 179/380 (47%), Gaps = 1/380 (0%)
Query: 223 QCWQVYEEMGRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLI 282
+ + E M R G P+ L F ++ K +E +E+ G PD+ YN LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 283 SSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLS 342
+ +CK R++DA + M ++ PD VTY ++ LC GK+ A ++ ++++
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 343 PDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNL 402
P +++Y LI A EG + E+ L+ EM+ G+ PD FT I++G KEG + A +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 403 VVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELMESLCK 462
V L+ G Y+ L+ AL + L+ ++ + P++ Y+ L+ +LC+
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 463 CDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQI 522
+ +A+ L M ++ + P +Y LI FC GR A+ ++ M+ G LPD
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 523 CRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFL 582
++ C ++A + G + ++ SYN +F+ GD + + + +
Sbjct: 406 YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMM 465
Query: 583 RLGFAPNNLTCKYMIHSLWK 602
G P+ +T MI L +
Sbjct: 466 SNGIDPDEITYNSMISCLCR 485
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 1/359 (0%)
Query: 248 HVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYRRNVL 307
H C++G+ + LE + +G++PD++ LI + + A + I+ +
Sbjct: 97 HRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ- 155
Query: 308 PDLVTYTTLMNGLCKEGKVREAHQLFHRMVHRGLSPDIVSYNTLIFAYCKEGKMQESKSL 367
PD+ Y L+NG CK ++ +A ++ RM + SPD V+YN +I + C GK+ + +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 368 LYEMMGNGIYPDTFTCQIIVQGYGKEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQ 427
L +++ + P T I+++ EG + AL L+ E+ G+ Y+ +I +C+
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 428 DNRPFAATSLLERIGQDGYVPSLEIYNELMESLCKCDSVADALLLKDEMVDRNIKPSLST 487
+ A ++ + G P + YN L+ +L + L +M P++ T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 488 YRALICCFCGIGRSGEAVSLMDEMLESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFA 547
Y LI C G+ EA++L+ M E G+ PD+ LI +C E ++ A L
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 548 KKFQIYDTESYNAVFNMFAEDGDLSKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMER 606
+ D +YN V ++G + +E+ + +G +PN+ + M +LW ++
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 9/186 (4%)
Query: 124 PTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVDVFQDLISCTEDCNWAYVKV 183
P NY ++ L N K A+++ +L E+ C + + + S W+
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEV--GCSPNSSSYNTMFSAL----WSS--- 451
Query: 184 GLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQCWQVYEEMGRIGICPNTHTF 243
G + + + G P ++ N +++ L + +D+ +++ +M P+ T+
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 244 NILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVTYNTLISSYCKKGRLNDAFYLYRIMYR 303
NI+ FCK ++ LE + G P+ TY LI G +A L + R
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Query: 304 RNVLPD 309
+ + +
Sbjct: 572 IDAISE 577
>sp|O81908|PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060,
chloroplastic OS=Arabidopsis thaliana GN=At1g02060 PE=2
SV=2
Length = 710
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 235/517 (45%), Gaps = 50/517 (9%)
Query: 100 LRCQSDSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDC 159
LR L FF+WV N ++ L++ L + A L + C
Sbjct: 75 LRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGC 133
Query: 160 PHSVD-VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKL 218
D F LI +Y GL +ES K F+ +G PS+++ N LL+ LLK
Sbjct: 134 VKLQDRYFNSLIR-------SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 219 NCIDQCWQVYEEMGRI-GICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
+++EM R G+ P+++TFN L + FCKN VD+ + +E +PD+VT
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRR--NVLPDLVTYTTLMNGLCKEGKVREAHQLFHR 335
YNT+I C+ G++ A + M ++ +V P++V+YTTL+ G C + ++ EA +FH
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 336 MVHRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIY----PDTFTCQIIVQGYG 391
M+ RGL P+ V+YNTLI + + E K +L + GN + PD T I+++ +
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHC 364
Query: 392 KEGRLLSALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLE 451
G L +A+ + E+ + Y LI LC N A +L
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL-------------- 410
Query: 452 IYNELMESLCKCDSVADALLLKDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
+NEL E + LL KDE KP + Y + C G++ +A + ++
Sbjct: 411 -FNELFEK--------EVLLGKDE-----CKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 512 LESGMLPDSQICRVLINGYCMEKDVNKAEALLGFFAKKFQIYDTESYNAVFNMFAEDGDL 571
++ G + D + LI G+C E A LL ++ + D E+Y + + + G+
Sbjct: 457 MKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEA 515
Query: 572 SKLMELQKRFLRLGFAPNNLTCKYMIHSLWKGMERKF 608
+ +R LR + P T ++ L K RKF
Sbjct: 516 LLAHDTLQRMLRSSYLPVATTFHSVLAELAK---RKF 549
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 197/484 (40%), Gaps = 70/484 (14%)
Query: 48 LYNFLPETQNPNKIVDLICSSLKKGDSH--LTLLQNDLKPLLPHLGAHE-ISRVLLRCQS 104
LY+ P+ N I+D +C + K +H L+ + + P++ ++ + R Q
Sbjct: 237 LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE 296
Query: 105 DSVSALTFFNWVKNDLEIKPTSSNYCLIVHILAWNNKFSFAMKMLCELVELVKDCPHSVD 164
+ L F + + L KP + Y ++ L+ +++ +L +
Sbjct: 297 IDEAVLVFHDMLSRGL--KPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDAC 354
Query: 165 VFQDLISCTEDCNWAYVKVGLIRESFKTFRKTLDVGFQPSIVSCNFLLNGLLKLNCIDQC 224
F LI A+ G + + K F++ L++ P S + L+ L N D+
Sbjct: 355 TFNILIK-------AHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 225 WQVYEEM-------GRIGICPNTHTFNILTHVFCKNGDVDKVNGFLEKIEEEGFDPDLVT 277
++ E+ G+ P +N + C NG + ++ + G D +
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPS 466
Query: 278 YNTLISSYCKKGRLNDAFYLYRIMYRRNVLPDLVTYTTLMNGLCKEGKVREAHQLFHRMV 337
Y TLI+ +C++G+ A+ L +M RR +PDL TY L++GL K G+ AH RM+
Sbjct: 467 YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML 526
Query: 338 HRGLSPDIVSYNTLIFAYCKEGKMQESKSLLYEMMGNGIYPDTFTCQIIVQGYGKEGRLL 397
P ++++++ K ES L+ M+ E R+
Sbjct: 527 RSSYLPVATTFHSVLAELAKRKFANESFCLVTLML--------------------EKRIR 566
Query: 398 SALNLVVELQRFGVSISRDIYDYLIVALCQDNRPFAATSLLERIGQDGYVPSLEIYNELM 457
++L ++ R S ++ +LIV L DN GY+ +E EL+
Sbjct: 567 QNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDN---------------GYLVKME---ELL 608
Query: 458 ESLCKCDSVADALLL------KDEMVDRNIKPSLSTYRALICCFCGIGRSGEAVSLMDEM 511
LC+ + DA L K +MVD + T +I C R EA SL +E+
Sbjct: 609 GYLCENRKLLDAHTLVLFCLEKSQMVD------IDTCNTVIEGLCKHKRHSEAFSLYNEL 662
Query: 512 LESG 515
+E G
Sbjct: 663 VELG 666
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,467,809
Number of Sequences: 539616
Number of extensions: 9500901
Number of successful extensions: 31693
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 21840
Number of HSP's gapped (non-prelim): 3140
length of query: 609
length of database: 191,569,459
effective HSP length: 123
effective length of query: 486
effective length of database: 125,196,691
effective search space: 60845591826
effective search space used: 60845591826
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)