BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037913
(141 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
Query: 134 DEFRIMMS 141
EF IMM+
Sbjct: 358 PEFLIMMA 365
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 435
Query: 139 MMS 141
MM+
Sbjct: 436 MMT 438
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 366 PEFLTMMA 373
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 139 MMS 141
MM+
Sbjct: 444 MMT 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 366 PEFLTMMA 373
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 139 MMS 141
MM+
Sbjct: 444 MMT 446
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 367 PEFLTMMA 374
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 139 MMS 141
MM+
Sbjct: 445 MMT 447
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +GDG ++F
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 366 PEFLTMMA 373
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 443
Query: 139 MMS 141
MM+
Sbjct: 444 MMT 446
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ D KEAF +++ DG GCIT + L ++ L Q+ +++E + MI+ D +G+G + F
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 134 DEFRIMMS 141
DEF +M+
Sbjct: 66 DEFLSLMA 73
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+LKEAFK+++ D G I+ L+ ++ LG+ +D+E + MI DL+GDG +N++EF
Sbjct: 84 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 143
Query: 139 MM 140
MM
Sbjct: 144 MM 145
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ D KEAF +++ DG GCIT + L ++ L Q+ +++E + MI+ D +G+G + F
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 134 DEFRIMMS 141
DEF +M+
Sbjct: 66 DEFLSLMA 73
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ D KEAF +++ DG GCIT + L ++ L Q+ +++E + MI+ D +G+G + F
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 134 DEFRIMMS 141
DEF +M+
Sbjct: 66 DEFLSLMA 73
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG GCIT + L ++ LGQ+ ++ E + M++ D +G+G ++F
Sbjct: 6 EEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLGMMA 73
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-R 137
+++EAF++++ DG G ++ L+ +++RLG+ SD+E MI D +GDG +N++EF R
Sbjct: 84 EIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVR 143
Query: 138 IMMS 141
+++S
Sbjct: 144 VLVS 147
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 71 SGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGV 130
+ EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 131 LNFDEFRIMMS 141
++F EF MM+
Sbjct: 61 IDFPEFLTMMA 71
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 139 MMS 141
MM+
Sbjct: 142 MMT 144
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 333 PEFLTMMA 340
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Query: 139 MMS 141
MM+
Sbjct: 411 MMT 413
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI +++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 333 PEFLTMMA 340
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 410
Query: 139 MMS 141
MM+
Sbjct: 411 MMT 413
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 62 PEFLTMMA 69
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI +++GDG +N++EF
Sbjct: 79 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQ 138
Query: 139 MMS 141
MM+
Sbjct: 139 MMT 141
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQ 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 64 PEFLTMMA 71
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 139 MMS 141
MM+
Sbjct: 142 MMT 144
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 62 PEFLTMMA 69
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 139
Query: 139 MMS 141
MM+
Sbjct: 140 MMT 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 65 PEFLTMMA 72
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 83 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 142
Query: 139 MMS 141
MM+
Sbjct: 143 MMT 145
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 63 PEFLTMMA 70
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 81 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 140
Query: 139 MMS 141
MM+
Sbjct: 141 MMT 143
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 69
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 70 PEFLTMMA 77
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 147
Query: 139 MMS 141
MM+
Sbjct: 148 MMT 150
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 67
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 68 PEFLTMMA 75
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 145
Query: 139 MMS 141
MM+
Sbjct: 146 MMT 148
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 64 PEFLTMMA 71
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 141
Query: 139 MMS 141
MM+
Sbjct: 142 MMT 144
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 367 PEFLTMMA 374
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 139 MMS 141
MM+
Sbjct: 445 MMT 447
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 330 PEFLTMMA 337
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 348 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 407
Query: 139 MMS 141
MM+
Sbjct: 408 MMT 410
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 72 PEFLTMMA 79
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 149
Query: 139 MMS 141
MM+
Sbjct: 150 MMT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Query: 139 MMS 141
MM+
Sbjct: 144 MMT 146
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 367 PEFLTMMA 374
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 139 MMS 141
MM+
Sbjct: 445 MMT 447
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 141
Query: 139 MMS 141
MM+
Sbjct: 142 MMT 144
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 367 PEFLTMMA 374
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 139 MMS 141
MM+
Sbjct: 445 MMT 447
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 368 PEFLTMMA 375
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
Query: 139 MMS 141
MM+
Sbjct: 446 MMT 448
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 367 PEFLTMMA 374
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 444
Query: 139 MMS 141
MM+
Sbjct: 445 MMT 447
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 67 PEFLTMMA 74
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVT 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMT 147
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
E++ +L EAFK+++ DG G I+ L+ +++ LG+ +DDE MI D++GDG +N
Sbjct: 3 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 62
Query: 133 FDEF-RIMMS 141
++EF R+M+S
Sbjct: 63 YEEFVRMMVS 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
+E++++ KEAF +++ DG GCIT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 DEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 66 PEFLNLMA 73
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
E+++++ KEAF +++ DG GCIT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 EDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 67 PEFLNLMA 74
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-R 137
+LKEAF++++ D G I+ L+ +++ LG+ +D+E MI D++GDG +N+DEF +
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVK 144
Query: 138 IMMS 141
+MM+
Sbjct: 145 VMMA 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
E++ +L EAFK+++ DG G I+ L+ +++ LG+ +DDE MI D++GDG +N
Sbjct: 78 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 133 FDEF-RIMMS 141
++EF R+M+S
Sbjct: 138 YEEFVRMMVS 147
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 66 PEFLSLMA 73
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
E++ +L EAFK+++ DG G I+ L+ +++ LG+ +DDE MI D++GDG +N
Sbjct: 78 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 137
Query: 133 FDEF-RIMMS 141
++EF R+M+S
Sbjct: 138 YEEFVRMMVS 147
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 66 PEFLSLMA 73
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAFK+++ DG G I+P L+ ++ LG+ +D+E MI D +GDG++N++EF
Sbjct: 84 EMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVW 143
Query: 139 MMS 141
M+S
Sbjct: 144 MIS 146
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + K+AF ++ +G G I + L ++ LGQ+ ++ E + +IA + N +G LNF
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Query: 134 DEF 136
EF
Sbjct: 66 TEF 68
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 46/68 (67%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
++++++ KEAF +++ DG GCIT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 7 DDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 67 PEFLNLMA 74
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-R 137
+LKEAF++++ D G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF +
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 144
Query: 138 IMMS 141
+MM+
Sbjct: 145 VMMA 148
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +Y+ DG G IT K L ++ LG + ++ E + MI D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF MM+
Sbjct: 66 PEFLTMMA 73
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 139 MMS 141
MM+
Sbjct: 63 MMT 65
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 139 MMS 141
MM+
Sbjct: 66 MMT 68
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-R 137
+LKEAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF +
Sbjct: 84 ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 143
Query: 138 IMMS 141
+MM+
Sbjct: 144 VMMA 147
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
+E++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 66 PEFLNLMA 73
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
Query: 139 MMS 141
MM+
Sbjct: 67 MMT 69
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
Query: 139 MMS 141
MM+
Sbjct: 70 MMT 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-R 137
+LKEAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF +
Sbjct: 81 ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQ 140
Query: 138 IMMS 141
+MM+
Sbjct: 141 VMMA 144
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
+E++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 63 PEFLNLMA 70
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 44/63 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
Query: 139 MMS 141
MM+
Sbjct: 69 MMT 71
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-RI 138
LKEAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF ++
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 139 MMS 141
MM+
Sbjct: 145 MMA 147
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
+E++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI D +G+G ++F
Sbjct: 6 DEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 134 DEFRIMMS 141
EF +M+
Sbjct: 66 PEFLNLMA 73
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 139 MM 140
MM
Sbjct: 66 MM 67
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+LKEAFK+++ D G I+ L+ ++ LG+ +D+E + MI DL+GDG +N++EF
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 139 MM 140
MM
Sbjct: 65 MM 66
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ +++EAF +++ DG G I K LK + LG +E K MI+ D +G G ++F
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 134 DEFRIMMS 141
+EF MM+
Sbjct: 84 EEFLTMMT 91
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 72 GEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVL 131
GE + ++ +AF++++ D G IT K L+R+ LG++ +++E + MIA D N D +
Sbjct: 95 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEI 154
Query: 132 NFDEF-RIM 139
+ DEF RIM
Sbjct: 155 DEDEFIRIM 163
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ +++EAF +++ DG G I K LK + LG +E K MI+ D +G G ++F
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 134 DEFRIMMS 141
+EF MM+
Sbjct: 86 EEFLTMMT 93
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+LKEAFK+++ D G I+ L+ ++ LG+ +D+E + MI DL+GDG +N++EF
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 139 MM 140
MM
Sbjct: 70 MM 71
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 45/60 (75%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
++++K AF++++ D G I+ K+L+R+ LG++ +D+E ++MI FDL+GDG +N +EF
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEF 154
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ ++ EAF +++M+ G + LK + LG E +I +D G ++ +
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 134 DEFRIMM 140
D+F I+M
Sbjct: 79 DDFYIVM 85
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ +++EAF +++ DG G I K LK + LG +E K MIA D +G G ++F
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 134 DEFRIMMS 141
+EF MM+
Sbjct: 64 EEFLQMMT 71
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 2 KEKHQQYERVFNHFDSNGDRRISPSELQQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61
+E+ Q+ F+ FD++G I EL+ +
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 62 XXXVRLVEGS-GEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMI 120
++++ GE + ++ +AF++++ D G I+ K+LKR+ LG++ +D+E + MI
Sbjct: 64 EEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMI 123
Query: 121 AYFDLNGDGVLNFDE-FRIM 139
D +GDG +N +E FRIM
Sbjct: 124 DEADRDGDGEVNEEEFFRIM 143
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIM 139
++EAF++++ DG G I+ L+ +++ LG+ +D+E MI D++GDG +N+++F M
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
Query: 140 MS 141
M+
Sbjct: 69 MT 70
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L ++ LGQ+ ++ E + MI +G+G ++F
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDF 366
Query: 134 DEFRIMMS 141
+F MM+
Sbjct: 367 PQFLTMMA 374
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 42/63 (66%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF+++ DG G I+ L+ +++ LG+ +D+E MI ++GDG +N+++F
Sbjct: 385 EIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQ 444
Query: 139 MMS 141
MM+
Sbjct: 445 MMT 447
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-R 137
+LKEAF++++ D G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF +
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 138 IMMS 141
+MM+
Sbjct: 65 VMMA 68
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+++EAF++ + DG G I+ L+ +++ LG+ +D+E MI D++GDG +N++EF
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
Query: 139 MMS 141
MM+
Sbjct: 90 MMT 92
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K+L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
GSGE + ++ +AF++++ D G IT K L+R+ LG++ +++E + MIA D N D
Sbjct: 1 GSGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 130 VLNFDEF-RIM 139
++ DEF RIM
Sbjct: 61 EIDEDEFIRIM 71
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 44/60 (73%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
++++K AF++++ D G I+ K+L+R+ LG++ +D+E ++ I FDL+GDG +N +EF
Sbjct: 95 LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEF 154
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ ++ EAF +++ + G + LK LG E +I +D G + +
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 134 DEFRIM 139
D+F I+
Sbjct: 79 DDFYIV 84
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 72
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 73 EEFLVMM 79
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE L E F++++ + G I + L + G+ +D+E +S++ D N DG
Sbjct: 89 GKSEEE----LAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDG 144
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 145 RIDFDEFLKMM 155
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDF 72
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 73 EEFLVMM 79
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE L E F++++ + G I + L + G+ +D+E +S++ D N DG
Sbjct: 89 GKSEEE----LAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDG 144
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 145 RIDFDEFLKMM 155
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE L++ F++++ + G I + L +L G+ ++++ + ++ D N DG
Sbjct: 92 GKSEEE----LEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 148 RIDFDEFLKMM 158
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 64
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 65 EEFLVMM 71
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE L F++++ + G I + L +L G+ ++++ + ++ D N DG
Sbjct: 92 GKSEEE----LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 148 RIDFDEFLKMM 158
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ D GCI+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 72
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 73 EEFLVMM 79
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE N F++++ + G I + L +L G+ ++++ + ++ D N DG
Sbjct: 89 GKSEEELAN----CFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 144
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 145 RIDFDEFLKMM 155
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE N F++++ + G I + L +L G+ +++ + ++ D N DG
Sbjct: 92 GKSEEELAN----CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 147
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 148 RIDFDEFLKMM 158
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + +E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE L + F++++ + G I + L +L G+ ++++ + ++ D N DG
Sbjct: 92 GKSEEE----LADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 148 RIDFDEFLKMM 158
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L + LGQ+ ++ E + I D +G+G ++F
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
Query: 134 DEF 136
EF
Sbjct: 67 PEF 69
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+++EAF++++ DG G I+ L+ + + LG+ +D+E I D++GDG +N++EF
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L + LGQ+ ++ E + I D +G+G ++F
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Query: 134 DEF 136
EF
Sbjct: 66 PEF 68
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+++EAF++++ DG G I+ L+ + + LG+ +D+E I D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+ DL+ AF+ ++ DG G IT L+R ++ LGQ +E +MI D++ DG +N++EF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 137 RIMMS 141
M++
Sbjct: 65 ARMLA 69
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
+E+ N+ K AF ++ D GCI+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 DEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + GCI+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGC--GCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVL 131
EE+ N+ K AF ++ + G GCI+ K L +++ LGQ+ + +E + MI D +G G +
Sbjct: 14 EEQKNEFKAAFDIF-VQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72
Query: 132 NFDEFRIMM 140
+FDEF +MM
Sbjct: 73 DFDEFLVMM 81
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + GCI+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DEF 136
DEF
Sbjct: 151 DEF 153
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + GCI+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMMS 141
FDE+ +MM+
Sbjct: 74 FDEWLVMMA 82
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ +++EAF +++ DG G I K LK + LG +E K MI+ D G G +NF
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 134 DEFRIMMS 141
+F +M+
Sbjct: 62 GDFLTVMT 69
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-RIM 139
AFK+++ D G I+ K+LKR+ LG++ +D+E + MI D +GDG ++ EF RIM
Sbjct: 84 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 141
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ +++EAF +++ DG G I K LK + LG +E K MI+ D G G +NF
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Query: 134 DEFRIMMS 141
+F +M+
Sbjct: 87 GDFLTVMT 94
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE + + K AF M++ DG G I+ K L ++ LGQ+ + E ++I D +G G ++F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDF 75
Query: 134 DEFRIMM 140
+EF +MM
Sbjct: 76 EEFLVMM 82
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + GCI+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDE+ +MM
Sbjct: 74 FDEWLVMM 81
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ DG G IT K L + LG + ++ E + I D +G+G +NF
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Query: 134 DEF 136
EF
Sbjct: 66 PEF 68
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+++EAF++++ DG G I+ L+ + + LG+ +D+E I D++GDG +N++EF
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DEF 136
DEF
Sbjct: 151 DEF 153
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRL----GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+L+E + DG G + M+ R + K+++E + FD N DG ++ +
Sbjct: 56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLE 115
Query: 135 EFRIMM 140
E +IM+
Sbjct: 116 ELKIML 121
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ D G I+ L ++ LG S S+ E ++ D++G+ + F
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
Query: 134 DEFRIMMS 141
EF +MS
Sbjct: 67 SEFLALMS 74
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 44/67 (65%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
E+++ +++EAFK+++ DG G I+ + L + LG ++ E + +I D++GDG ++F
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
Query: 134 DEFRIMM 140
+EF ++
Sbjct: 92 EEFVTLL 98
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DEF 136
DEF
Sbjct: 151 DEF 153
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL----GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
L+E + DG G + M+ R + KS++E + +D N DG ++ DE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 136 FRIMM 140
+IM+
Sbjct: 117 LKIML 121
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DEF 136
DE+
Sbjct: 151 DEW 153
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL----GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
L+E + DG G + M+ R + KS++E + FD N DG ++ DE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 136 FRIMM 140
+IM+
Sbjct: 117 LKIML 121
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DEF 136
DEF
Sbjct: 151 DEF 153
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL----GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
L+E + DG G + M+ R + KS++E + FD N DG ++ +E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 136 FRIMM 140
+IM+
Sbjct: 117 LKIML 121
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M + + G I LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DEF 136
DEF
Sbjct: 151 DEF 153
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL----GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
L+E + DG G + M+ R + KS++E + D N DG ++ DE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 136 FRIMM 140
+IM+
Sbjct: 117 LKIML 121
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + G I+ K L +++ LGQ+ + +E + MI D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 133 FDEFRIMM 140
FDEF +MM
Sbjct: 74 FDEFLVMM 81
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 94 EEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 134 DE 135
DE
Sbjct: 151 DE 152
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL----GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
L+E + DG G + M+ R + KS++E + FD N DG ++ DE
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 136 FRIMM 140
+IM+
Sbjct: 117 LKIML 121
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
E+ +L+EAF++Y+ +G G I+ ++ +L+ L ++ S ++ +MI D +G G ++F
Sbjct: 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDF 146
Query: 134 DEFRIMMS 141
+EF +M+
Sbjct: 147 EEFMGVMT 154
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 80 LKEAFKMYEM-DGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
L+ AF+ +E +G G ++ + +L LG ++ + +I FD G+G ++FD F+I
Sbjct: 15 LETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKI 74
Query: 139 M 139
+
Sbjct: 75 I 75
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIM 139
L+EAF++Y+ +G G I+ ++ +L+ L ++ S ++ +MI D +G G ++F+EF +
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 140 MS 141
M+
Sbjct: 65 MT 66
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRI 138
+LKEAF++ + + G I L+ +L LG ++DE ++MIA D +G G ++++EF+
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 139 MM 140
+M
Sbjct: 68 LM 69
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ D G I+ L ++ LG S S+ E ++ D++G+ + F
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 134 DEFRIMMS 141
EF +MS
Sbjct: 66 SEFLALMS 73
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ D G I+ L ++ LG S S+ E ++ D++G+ + F
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 134 DEFRIMMS 141
EF +MS
Sbjct: 66 SEFLALMS 73
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ D G I+ L ++ LG S S+ E ++ D++G+ + F
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 134 DEFRIMMS 141
EF +MS
Sbjct: 66 SEFLALMS 73
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ + KEAF +++ D G I+ L ++ LG S S+ E ++ D++G+ + F
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
Query: 134 DEFRIMMS 141
EF +MS
Sbjct: 67 SEFLALMS 74
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-RIM 139
AFK+++ D G I+ K+LKR+ LG++ +D+E + MI D +GDG ++ EF RIM
Sbjct: 16 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 73
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSR--LGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
FK +++DG G I+ + LKR+ R + D S++ DLNGDG ++F EF +MM
Sbjct: 134 PFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193
Query: 141 S 141
S
Sbjct: 194 S 194
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF-RIM 139
AFK+++ D G I+ K+LKR+ LG++ +D+E + MI D +GDG ++ EF RIM
Sbjct: 26 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 83
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 74 EEKMNDLKEAFKMYEMDG-CGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
EE+ N+ K AF ++ + GCI+ K L ++ LGQ+ + +E + I D +G G ++
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVD 73
Query: 133 FDEFRI 138
FDEF +
Sbjct: 74 FDEFLV 79
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ LKE FKM + D G IT LK L R+G + E K ++ D++ G +++
Sbjct: 19 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78
Query: 134 DEF 136
EF
Sbjct: 79 GEF 81
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIM 139
++ AFKM++ DG G I+ K L ++ S+ S +E +S+I D N DG ++F+EF M
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 140 M 140
+
Sbjct: 479 L 479
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE++ LKE FKM + D G IT LK L R+G + E K ++ D++ G +++
Sbjct: 6 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 65
Query: 134 DEF 136
EF
Sbjct: 66 GEF 68
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
+ + D + FK ++ +G G I+ L L LG S + DE + M+A D +GDG ++FD
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFD 66
Query: 135 EF 136
EF
Sbjct: 67 EF 68
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 9 ERVFNHFDSNGDRRISPSELQQCV 32
ER+F FD+NGD +IS SEL +
Sbjct: 14 ERIFKRFDTNGDGKISSSELGDAL 37
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
+ +L++AF+ ++ +G G I+ L+ + +L G + + +I DLNGDG ++F+E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 136 FRIMMS 141
F MMS
Sbjct: 66 FVRMMS 71
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 11 VFNHFDSNGDRRISPSELQQCV 32
F FD+NGD IS SEL++ +
Sbjct: 12 AFREFDTNGDGEISTSELREAM 33
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+D++ FK ++ +G G I+ L L LG S S DE + M+A D +GDG ++F+EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEF 59
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 9 ERVFNHFDSNGDRRISPSELQQCV 32
ER+F FD+NGD +IS SEL +
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDAL 28
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+D++ FK ++ +G G I+ L L LG S S DE + M+A D +GDG ++F+EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEF 60
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 9 ERVFNHFDSNGDRRISPSELQQCV 32
ER+F FD+NGD +IS SEL +
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDAL 29
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
AFK+++ D G I+ K+LKR+ LG++ +D+E + I D +GDG ++ EF
Sbjct: 109 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEF 162
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ +++EAF +++ DG G I K LK LG +E K I+ D G G NF
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNF 86
Query: 134 DEF 136
+F
Sbjct: 87 GDF 89
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKR-MLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
+ +L++AF+ ++ +G G I+ L+ M + LG + + +I DLNGDG ++F+E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 136 FRIMMS 141
F MMS
Sbjct: 147 FVRMMS 152
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
E++ +L+EAF+ ++ D G I + L + +G ++ E + ++N G ++FD
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 135 EFRIMMS 141
+F +M
Sbjct: 68 DFVELMG 74
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 11 VFNHFDSNGDRRISPSELQQCV 32
F FD+NGD IS SEL++ +
Sbjct: 93 AFREFDTNGDGEISTSELREAM 114
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
+ +L++AF+ ++ +G G I+ L+ + +L G + + +I DLNGDG ++F+E
Sbjct: 87 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 146
Query: 136 FRIMMS 141
F MMS
Sbjct: 147 FVRMMS 152
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
E++ +L+EAF+ ++ D G I + L + +G ++ E + ++N G ++FD
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 67
Query: 135 EFRIMMS 141
+F +M
Sbjct: 68 DFVELMG 74
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 11 VFNHFDSNGDRRISPSELQQCV 32
F FD+NGD IS SEL++ +
Sbjct: 93 AFREFDTNGDGEISTSELREAM 114
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 84 FKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
FK ++ +G G I+ L L LG S + DE K M+A D +GDG ++F EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFISFQEF 66
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 7 QYERVFNHFDSNGDRRISPSELQQCV 32
+ ER+F FD+NGD +IS +EL + +
Sbjct: 10 ERERIFKRFDANGDGKISAAELGEAL 35
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSMIAYFDLNGDGVLNFDE 135
+ +L++AF+ ++ +G G I+ L+ + +L G + + +I DLNGDG ++F+E
Sbjct: 101 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 160
Query: 136 FRIMMS 141
F MMS
Sbjct: 161 FVRMMS 166
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
E++ +L+EAF+ ++ D G I + L + +G ++ E + ++N G ++FD
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 81
Query: 135 EFRIMMS 141
+F +M
Sbjct: 82 DFVELMG 88
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 11 VFNHFDSNGDRRISPSELQQCV 32
F FD+NGD IS SEL++ +
Sbjct: 107 AFREFDTNGDGEISTSELREAM 128
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
ND+K+ FK + D G I + LK +L G+ +D E K+ + D +GDG + D
Sbjct: 42 NDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGID 101
Query: 135 EFRIMM 140
EF ++
Sbjct: 102 EFETLV 107
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 4 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 60
Query: 134 DEF 136
DEF
Sbjct: 61 DEF 63
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 111 KSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
KS++E + FD N DG ++ +E +IM+
Sbjct: 2 KSEEELSDLFRMFDKNADGYIDLEELKIML 31
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSK---SDDECKSMIAYFDLNGDGVLNF 133
++D+K+AF + + D G I LK L S +D E K+ +A D +GDG++
Sbjct: 40 LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGV 99
Query: 134 DEFRIMM 140
DEF M+
Sbjct: 100 DEFAAMI 106
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 9 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 65
Query: 134 DEF 136
DEF
Sbjct: 66 DEF 68
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 109 QSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
+ K+++E + FD N DG ++ +E +IM+
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIML 36
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 65 VRLVEGSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFD 124
+R++ S EE++ LKE F + D G IT + LK L R+G + + E + D
Sbjct: 14 LRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAAD 73
Query: 125 LNGDGVLNFDEF 136
++ G +++ EF
Sbjct: 74 VDNSGTIDYKEF 85
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
E+ + L AF ++ DG G ITP L++ G D + + D + DG ++++
Sbjct: 96 EREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV--EDVRIEELXRDVDQDNDGRIDYN 153
Query: 135 EF 136
EF
Sbjct: 154 EF 155
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 11 VFNHFDSNGDRRISPSELQQC 31
F +FD +G I+P ELQQ
Sbjct: 104 AFTYFDKDGSGYITPDELQQA 124
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 6 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 62
Query: 134 DEF 136
DEF
Sbjct: 63 DEF 65
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 109 QSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
+ KS++E + FD N DG ++ +E +IM+
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIML 33
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
E+ ++ +AF+ + +G G I L+++L LG + + E + ++ ++GDG +N++
Sbjct: 73 EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE 132
Query: 135 EFRIMM 140
F M+
Sbjct: 133 SFVDML 138
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +LS LG+ SD+E +I DL D G
Sbjct: 79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGN 138
Query: 131 LNFDEF 136
+ ++EF
Sbjct: 139 VKYEEF 144
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
+M +LKEAF M + D G I + LK M S LG+ DDE +M+ G LNF
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTA 69
Query: 136 FRIM 139
F +
Sbjct: 70 FLTL 73
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +LS LG+ SD+E +I DL D G
Sbjct: 79 EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGN 138
Query: 131 LNFDEF 136
+ ++EF
Sbjct: 139 VKYEEF 144
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I + LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 14 EEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 70
Query: 134 DEF 136
DEF
Sbjct: 71 DEF 73
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 109 QSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
+ K+++E + FD N DG ++ +E +IM+
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIML 41
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +LS LG+ SD+E +I DL D G
Sbjct: 80 EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGN 139
Query: 131 LNFDEF 136
+ ++EF
Sbjct: 140 VKYEEF 145
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+++DL F+M++ + G I LK ML G++ ++D+ + ++ D N DG +++
Sbjct: 5 EEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 134 DEF 136
DEF
Sbjct: 62 DEF 64
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 110 SKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
KS++E + FD N DG ++ DE +IM+
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIML 32
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDEC-KSMIAYFDLNGDGVLNFDEFRI 138
L+ AF+M++ D G I+ L + G S D E KS+++ D N DG ++FDEF+
Sbjct: 443 LERAFRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 499
Query: 139 MM 140
M+
Sbjct: 500 ML 501
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDEC-KSMIAYFDLNGDGVLNFDEFRI 138
L+ AF+M++ D G I+ L + G S D E KS+++ D N DG ++FDEF+
Sbjct: 444 LERAFRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 500
Query: 139 MM 140
M+
Sbjct: 501 ML 502
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
EE+ ++KEAF +++ + G I LK + LG E ++ +D G+G + F
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGF 62
Query: 134 DEFRIMMS 141
D+F +M+
Sbjct: 63 DDFLDIMT 70
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDEC-KSMIAYFDLNGDGVLNFDEFRI 138
L+ AF+M++ D G I+ L + G S D E KS+++ D N DG ++FDEF+
Sbjct: 420 LERAFRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Query: 139 MM 140
M+
Sbjct: 477 ML 478
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 80 LKEAFKMYEMDGCGCITPKSLK------RMLSRLGQSKSDDECKSMIA-YFDLNGDGVLN 132
L+ FK+Y++DG GCI L R ++R ++ + +E +M+ D+NGDG L+
Sbjct: 90 LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELS 149
Query: 133 FDEF 136
+EF
Sbjct: 150 LEEF 153
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 77 MND---LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
MND L E F+ + DG G I+ L LS G S + ++ +D N G + F
Sbjct: 23 MNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITF 82
Query: 134 DEFR 137
DEF+
Sbjct: 83 DEFK 86
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +L+ LG+ SD++ +I DL D G
Sbjct: 76 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 135
Query: 131 LNFDEF 136
+ +++F
Sbjct: 136 VKYEDF 141
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +L+ LG+ SD++ +I DL D G
Sbjct: 76 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 135
Query: 131 LNFDEF 136
+ +++F
Sbjct: 136 VKYEDF 141
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
M ++KEAF M + + G I LK M S LG++ D E +M+ G LNF F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMF 77
Query: 137 RIMMS 141
+ S
Sbjct: 78 LSIFS 82
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
M ++KEAF M + + G I LK M S LG++ D E +M+ G LNF F
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNFTMF 77
Query: 137 RIMMS 141
+ S
Sbjct: 78 LSIFS 82
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +L+ LG+ SD++ +I DL D G
Sbjct: 77 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 136
Query: 131 LNFDEF 136
+ +++F
Sbjct: 137 VKYEDF 142
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +L+ LG+ SD++ +I DL D G
Sbjct: 79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 138
Query: 131 LNFDEF 136
+ +++F
Sbjct: 139 VKYEDF 144
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +L+ LG+ SD++ +I DL D G
Sbjct: 79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 138
Query: 131 LNFDEF 136
+ +++F
Sbjct: 139 VKYEDF 144
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD--GV 130
E+ D EAFK ++ +G G I+ L+ +L+ LG+ SD++ +I DL D G
Sbjct: 79 EQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGN 138
Query: 131 LNFDEF 136
+ +++F
Sbjct: 139 VKYEDF 144
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
K+ KE + ++++G G I SLKRML +LG K+ E K +I ++ +
Sbjct: 49 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 108
Query: 136 FRIMM 140
F MM
Sbjct: 109 FLRMM 113
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
K+ KE + ++++G G I SLKRML +LG K+ E K +I ++ +
Sbjct: 30 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
Query: 136 FRIMM 140
F MM
Sbjct: 90 FLRMM 94
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
++++ ++KEAF M + + G I LK M S LG++ D E +M+ G LNF
Sbjct: 15 QKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAPGPLNF 70
Query: 134 DEFRIMMS 141
F + S
Sbjct: 71 TMFLSIFS 78
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDEC-KSMIAYFDLNGDGVLNFDEFRI 138
L AF+ ++ DG G IT + L R+ G ++ DDE ++ D N DG ++F+EF
Sbjct: 125 LLAAFQQFDSDGSGKITNEELGRL---FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVE 181
Query: 139 MM 140
MM
Sbjct: 182 MM 183
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + + D G I LK L ++ +D E K+ + D +GDG + D
Sbjct: 42 DDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 101
Query: 135 EFRIMM 140
EF ++
Sbjct: 102 EFTALV 107
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 111 KSDDECKSMIAY--FDLNGDGVLNFDEFRIMM 140
+ DDE + + A+ FD NGDGV++FDEF+ +M
Sbjct: 3 RQDDEEEILRAFKVFDANGDGVIDFDEFKFIM 34
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGD 128
++ EAFK ++ +G G I+ ++ +L LG+ ++D+C + + D+ D
Sbjct: 85 DEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIRED 135
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 82 EAFKM----YEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFR 137
EAFK+ ++++G G I SLKRML +LG K+ E K +I + ++ +F
Sbjct: 48 EAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFL 107
Query: 138 IMM 140
MM
Sbjct: 108 RMM 110
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDEC-KSMIAYFDLNGDGVLNFDEFRI 138
L AF+ ++ DG G IT + L R+ G ++ DDE ++ D N DG ++F+EF
Sbjct: 399 LLAAFQQFDSDGSGKITNEELGRL---FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVE 455
Query: 139 MM 140
MM
Sbjct: 456 MM 457
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
++++ ++KEAF M ++D G ++ + +K + +LG++ D E +M+ G LNF
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNF 58
Query: 134 DEFRIMMS 141
F + S
Sbjct: 59 TMFLSIFS 66
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
++++ ++KEAF M ++D G ++ + +K + +LG++ D E +M+ G LNF
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNF 57
Query: 134 DEFRIMMS 141
F + S
Sbjct: 58 TMFLSIFS 65
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
++++ ++KEAF M ++D G ++ + +K + +LG++ D E +M+ G LNF
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNF 58
Query: 134 DEFRIMMS 141
F + S
Sbjct: 59 TMFLSIFS 66
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
++++ ++KEAF M ++D G ++ + +K + +LG++ D E +M+ G LNF
Sbjct: 14 QKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNF 69
Query: 134 DEFRIMMS 141
F + S
Sbjct: 70 TMFLSIFS 77
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
EK+ KE + ++++ G I SLKRM+ +LG K+ E K MI+ +++
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 135 EFRIMM 140
+F MM
Sbjct: 107 DFVNMM 112
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
EK+ KE + ++++ G I SLKRM+ +LG K+ E K MI+ +++
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 135 EFRIMM 140
+F MM
Sbjct: 107 DFVNMM 112
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
++ ++KEAF M ++D G ++ + +K + +LG++ D E +M+ G LNF
Sbjct: 2 QIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTM 57
Query: 136 FRIMMS 141
F + S
Sbjct: 58 FLSIFS 63
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 33.9 bits (76), Expect = 0.029, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDEC-KSMIAYFDLNGDGVLNFDEFR 137
L+ AF+ ++ D G I+ L + G S D E KS+++ D N DG ++FDEF+
Sbjct: 420 LERAFRXFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQ 475
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 36/61 (59%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
K D +AF++++ + G ++ L+ ML+ LG+ +D E ++ +++ +G +++ +
Sbjct: 3 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 62
Query: 136 F 136
F
Sbjct: 63 F 63
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
D E F++++ +G G + L+ +L+ LG+ +++E ++++A + + +G +N++ F
Sbjct: 88 DYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAF 144
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + + D G I LK L ++ +D E K+ + D +GDG + D
Sbjct: 41 DDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 100
Query: 135 EFRIMM 140
E+ ++
Sbjct: 101 EWTALV 106
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
LKE F++ + D G I LK L R + + E K+ +A D +GDG + +EF
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
Query: 137 RIMM 140
+ M+
Sbjct: 103 QEMV 106
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 33.5 bits (75), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 36/61 (59%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
K D +AF++++ + G ++ L+ ML+ LG+ +D E ++ +++ +G +++ +
Sbjct: 81 KTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKK 140
Query: 136 F 136
F
Sbjct: 141 F 141
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
M ++KEAF M + + G I LK S LG++ D E +M+ G LNF F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLK----EAPGPLNFTMF 56
Query: 137 RIMMS 141
+ S
Sbjct: 57 LSIFS 61
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 70 GSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDG 129
G EEE L F++++ + G I + L +L G+ +++ + ++ D N DG
Sbjct: 6 GKSEEE----LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 61
Query: 130 VLNFDEFRIMM 140
++FDEF MM
Sbjct: 62 RIDFDEFLKMM 72
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRML---SRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + + D G I LK L S ++ +D E K+ + D +GDG + D
Sbjct: 42 DDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVD 101
Query: 135 EFRIMM 140
E+ ++
Sbjct: 102 EWAALV 107
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 95 ITPKSLKRMLSRLG-QSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
IT +SL+R LG + S ++ + M+ DL+GDG LN EF ++M
Sbjct: 57 ITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLM 103
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
N +K+ F+ + D G + + LK L + + ++ E KS++A D +GDG + +
Sbjct: 42 NQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAE 101
Query: 135 EFRIMM 140
EF+ M+
Sbjct: 102 EFQEMV 107
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + D G I LK L ++ +D E K+ + D +GDG + D
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 100
Query: 135 EFRIMM 140
E+ ++
Sbjct: 101 EWTALV 106
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 95 ITPKSLKRMLSRLGQS--KSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
I+ + LK ++ LG S K MI D NGDG ++F+EF +MM
Sbjct: 24 ISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMM 71
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
++ ++ + KEAF M + + G I + L ML+ +G++ +D+ + M++ G +N
Sbjct: 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPIN 57
Query: 133 FDEFRIMM 140
F F M
Sbjct: 58 FTMFLTMF 65
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 4/135 (2%)
Query: 6 QQYERVFNHFDSNGDRRISPSELQQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 65
Q+++ FN D N D I +L +
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFG 66
Query: 66 RLVEGSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDL 125
+ G+ E+ ++ AF ++ + G I L+ +L+ +G +D+E M +
Sbjct: 67 EKLNGTDPEDV---IRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPI 123
Query: 126 NGDGVLNFDEF-RIM 139
+ G N+ EF RI+
Sbjct: 124 DKKGNFNYVEFTRIL 138
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 74 EEKM-NDLKEAFKMYEMDGCGCITPKSLKRMLSRL-----GQSKSDDECKSMIAY-FDLN 126
+EKM LK FK+Y+ DG G I L M + Q+ S +E +++ + D+N
Sbjct: 88 QEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDIN 147
Query: 127 GDGVLNFDEF 136
DG L +EF
Sbjct: 148 NDGELTLEEF 157
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G IT K G S S ++C++ + DL+ G L+ DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G IT K G S S ++C++ + DL+ G L+ DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G IT K G S S ++C++ + DL+ G L+ DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G IT K G S S+++C+ + DL+ G L+ DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD---DECKSMIAYFDLNGDGVLNFD 134
+D+K+ F + + D G I L +L +D E K+++A D +GDG + +
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 135 EFRIMMS 141
EF +++
Sbjct: 101 EFSTLVA 107
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 16/82 (19%)
Query: 67 LVEGSGEEEKMNDLKEAFKMYEMDGCGCITP-------KSLKRMLSR-----LGQSKSDD 114
L+ G+ E+ LK AF +Y+++ GCIT KS+ M+ R L + +
Sbjct: 158 LLRGTVHEK----LKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLE 213
Query: 115 ECKSMIAYFDLNGDGVLNFDEF 136
+ D N DGV+ DEF
Sbjct: 214 HVERFFQKMDRNQDGVVTIDEF 235
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + D G I LK L ++ +D E K+ + D +GDG + D
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVD 100
Query: 135 EFRIMM 140
++ ++
Sbjct: 101 DWTALV 106
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G IT K G S S ++C++ + DL+ G L+ DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G IT K G S S ++C++ + DL+ G L+ DE
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRM--LSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
L+ AF+ ++ DG G I+ L + L L +SK+ K MI+ D N DG ++F+EF
Sbjct: 145 LESAFQKFDQDGNGKISVDELASVFGLDHL-ESKT---WKEMISGIDSNNDGDVDFEEF 199
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 9 ERVFNHFDSNGDRRISPSELQQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRLV 68
E +F D+NGD +S E++ V +
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 69 EGSGEEEKMND---LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDL 125
E++ ++ LK +K+ + DG G +T + + + G K D+ I D
Sbjct: 63 AAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQ----IMKADA 118
Query: 126 NGDGVLNFDEF 136
NGDG + +EF
Sbjct: 119 NGDGYITLEEF 129
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD---DECKSMIAYFDLNGDGVLNFD 134
+D+K+ F + + D G I L +L D E K+++A D +GDG + +
Sbjct: 5 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 64
Query: 135 EFRIMMS 141
EF +++
Sbjct: 65 EFSTLVA 71
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD---DECKSMIAYFDLNGDGVLNFD 134
+D+K+ F M + D G I L +L D E K ++A D +GDG + D
Sbjct: 42 DDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVD 101
Query: 135 EFRIMMS 141
EF +++
Sbjct: 102 EFSTLVA 108
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 68 VEGSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNG 127
+ G+ EE+ + + AF +++ +G G ++LKR L+ G+ S DE ++ ++G
Sbjct: 119 IAGTDEEDVIVN---AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDG 174
Query: 128 DGVLNFDEFRIMMS 141
+G+++ +F +++
Sbjct: 175 NGLIDIKKFAQILT 188
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
+ ++ + KEAF++ + D G I+ ++ LG+ ++ E SM+A G +NF
Sbjct: 53 QHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EAPGPINF 108
Query: 134 DEF 136
F
Sbjct: 109 TMF 111
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
Query: 80 LKEAFKMYEMDGCGCITP-------KSLKRMLSRL-----GQSKSDDECKSMIAYFDLNG 127
LK AF MY++DG G I+ +++ +M+S + +S + + + D N
Sbjct: 101 LKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNR 160
Query: 128 DGVLNFDEF 136
DG L+ +EF
Sbjct: 161 DGKLSLEEF 169
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 123 FDLNGDGVLNFDEFRIMMS 141
FD NGDG ++F EF I +S
Sbjct: 72 FDANGDGTIDFREFIIALS 90
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLN 132
F+ ++ +G G I + LS + K + + K + +DL+G+G ++
Sbjct: 68 VFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYIS 117
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 79 DLKEAFKMYEMDGCGCIT-PKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFR 137
+L++ + DG G I P+ L M ++ + S++E + FD +G+G ++ E R
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 138 IMMS 141
+M+
Sbjct: 62 HVMT 65
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLG 108
+++EAF++++ DG G I+ L+ +++ LG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD---DECKSMIAYFDLNGDGVLNFD 134
+D+K+ F + + D G I L +L D E K+++A D +GDG + +
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 135 EFRIMMS 141
EF +++
Sbjct: 101 EFSTLVA 107
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDG 129
+K L+ AF++Y+MD G I+ L ++L + G + D + + + I D +GDG
Sbjct: 72 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDG 131
Query: 130 VLNFDEF 136
++F+EF
Sbjct: 132 RISFEEF 138
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D C+SM+A D + G L F+EF+ + +
Sbjct: 756 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 801
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 95 ITPKSLKRMLSRLGQSKSD--------DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
I+ K L+ +L+R+ D + C+SM+ D +G+G L EF I+ +
Sbjct: 550 ISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWN 604
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDG 129
+K L+ AF++Y+MD G I+ L ++L + G + D + + + I D +GDG
Sbjct: 73 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDG 132
Query: 130 VLNFDEF 136
++F+EF
Sbjct: 133 RISFEEF 139
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIA 121
+++ND KEAF +++ G IT + ++ LGQ+ ++ E ++
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILG 47
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDG 129
+K L+ AF++Y+MD G I+ L ++L + G + D + + + I D +GDG
Sbjct: 86 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDG 145
Query: 130 VLNFDEF 136
++F+EF
Sbjct: 146 RISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDG 129
+K L+ AF++Y+MD G I+ L ++L + G + D + + + I D +GDG
Sbjct: 87 DKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDG 146
Query: 130 VLNFDEF 136
++F+EF
Sbjct: 147 RISFEEF 153
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 30.0 bits (66), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 98 KSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
K L MLS G K+ D+ +I D N DG ++FDE+ ++
Sbjct: 43 KELNHMLSDTGNRKAADK---LIQNLDANHDGRISFDEYWTLI 82
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 98 KSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIMM 140
K L MLS G K+ D+ +I D N DG ++FDE+ ++
Sbjct: 42 KELNHMLSDTGNRKAADK---LIQNLDANHDGRISFDEYWTLI 81
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D C+SM+A D + G L F+EF+ + +
Sbjct: 40 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 85
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRM--LSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
L+ AF+ ++ DG G I+ L + L L +SK+ K MI+ D N DG ++F+EF
Sbjct: 428 LESAFQKFDQDGNGKISVDELASVFGLDHL-ESKT---WKEMISGIDSNNDGDVDFEEF 482
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D C+SM+A D + G L F+EF+ + +
Sbjct: 40 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 85
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFD 134
E++ +L+EAF+ ++ D G I + L + +G ++ E + ++N G ++FD
Sbjct: 7 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
Query: 135 EFRIMMS 141
+F +M
Sbjct: 67 DFVELMG 73
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D C+SM+A D + G L F+EF+ + +
Sbjct: 29 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 74
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D C+SM+A D + G L F+EF+ + +
Sbjct: 36 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 81
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D C+SM+A D + G L F+EF+ + +
Sbjct: 29 LNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 74
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + D G I LK L ++ +D E K+ + D +GDG + +
Sbjct: 42 DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVE 101
Query: 135 EFRIMM 140
E+ ++
Sbjct: 102 EWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFD 134
+D+K+AF + D G I LK L ++ +D E K+ + D +GDG + +
Sbjct: 41 DDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVE 100
Query: 135 EFRIMM 140
E+ ++
Sbjct: 101 EWVALV 106
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 29.3 bits (64), Expect = 0.67, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIM 139
L+R+L++ KSD + CK M+ D +G G L EF I+
Sbjct: 556 LRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYIL 599
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 29.3 bits (64), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSK---SDDECKSMIAYFDLNGDGVLNFDEF 136
+K+ F + + D G I + L+ L S + E K+ +A D +GDG + +EF
Sbjct: 43 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 102
Query: 137 RIMM 140
+ ++
Sbjct: 103 QSLV 106
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 29.3 bits (64), Expect = 0.72, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIM 139
L+R+L++ KSD + CK M+ D +G G L EF I+
Sbjct: 557 LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 29.3 bits (64), Expect = 0.72, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIM 139
L+R+L++ KSD + CK M+ D +G G L EF I+
Sbjct: 557 LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRL---GQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+K+ F+ + D G + LK L + + ++ E KS++ D +GDG + DEF
Sbjct: 43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
Query: 137 RIMM 140
+ M+
Sbjct: 103 QEMV 106
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 77 MNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
+ L F+ + DG + ++ L++LG E + + +D NG G L+ +EF
Sbjct: 36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 29.3 bits (64), Expect = 0.74, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIM 139
L+R+L++ KSD + CK M+ D +G G L EF I+
Sbjct: 557 LRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL 600
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSK---SDDECKSMIAYFDLNGDGVLNFDEF 136
+K+ F + + D G I + L+ L S + E K+ +A D +GDG + +EF
Sbjct: 44 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEF 103
Query: 137 RIMM 140
+ ++
Sbjct: 104 QSLV 107
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD---DECKSMIAYFDLNGDGVLNFD 134
+D+K+ F + + D G I L +L D E K+++A D +GDG + +
Sbjct: 41 DDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 135 EFRIMMS 141
EF +++
Sbjct: 101 EFSTLVA 107
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 28.9 bits (63), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
AFK+ + DG G I L+ +L+ G + +E K+M A F + G +++
Sbjct: 100 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDY 150
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 66 RLVEGSG------EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQ-SKSDDECKS 118
R EGS +E ++ D KEAF + + + G I L+ + +G+ + ++E +
Sbjct: 7 RAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDA 66
Query: 119 MIAYFDLNGDGVLNFDEFRIMM 140
MI G +NF F M
Sbjct: 67 MIK----EASGPINFTVFLTMF 84
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 67 LVEGSGEEEKMNDLKEAFKMYE---MDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYF 123
L++ GEE+ M + ++ MY+ D G ++ K L +G +DD+ +
Sbjct: 89 LLKMKGEEKAMA-VIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTL 147
Query: 124 DLNGDGVLNFDEFRIMMS 141
D N +G ++ DEF + ++
Sbjct: 148 DFNKNGQISRDEFLVTVN 165
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 28.9 bits (63), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 84 FKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIMMS 141
F +++ D G I + +LS + +++ +DLN DG + FDE +++
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVA 126
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 80 LKEAFKMYEMDGCGCIT-------PKSLKRMLSRLGQSKSDDE-----CKSMIAYFDLNG 127
L AF++Y+++ G IT S+ +M+ + D+ K + D N
Sbjct: 101 LSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNE 160
Query: 128 DGVLNFDEFR 137
DG + DEFR
Sbjct: 161 DGYITLDEFR 170
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYF 123
AFK+ + DG G I L+ +L+ G + +E K+M A F
Sbjct: 82 AFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAF 122
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQ-SKSDDECKSMIAYFDLNGDGVL 131
+E ++ D KEAF + + + G I L+ + +G+ + ++E +MI G +
Sbjct: 2 DETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPI 57
Query: 132 NFDEFRIMMS 141
NF F M
Sbjct: 58 NFTVFLTMFG 67
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 83 AFKMYEMDGCGCITPKSLKRML---------SRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
AF++++ D G + + L R++ +RL S+ +++ D++ DG +N
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 134 DEFRIMMS 141
EF+ ++S
Sbjct: 194 SEFQHVIS 201
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 83 AFKMYEMDGCGCITPKSLKRML---------SRLGQSKSDDECKSMIAYFDLNGDGVLNF 133
AF++++ D G + + L R++ +RL S+ +++ D++ DG +N
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 134 DEFRIMMS 141
EF+ ++S
Sbjct: 163 SEFQHVIS 170
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
LK +K+ ++DG G +T + + + G K ++ D NGDG + +EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEF 129
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
LK +K+ ++DG G +T + + + G K ++ D NGDG + +EF
Sbjct: 77 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEF 129
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 48/139 (34%)
Query: 11 VFNHFDSNGDRRISPSELQQCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRLVEG 70
VFN FD N D RI SE Q + G
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTS--------------------------------RG 95
Query: 71 SGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQ------------SKSDDECKS 118
+ +E+ L+ AFK+Y++D G IT + ++ + Q + +
Sbjct: 96 TLDEK----LRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDR 151
Query: 119 MIAYFDLNGDGVLNFDEFR 137
+ A D N DG L EF+
Sbjct: 152 IFAMMDKNADGKLTLQEFQ 170
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
LK +K+ ++DG G +T + + + G K ++ D NGDG + +EF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKA----DANGDGYITLEEF 59
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDGV 130
+ N L AF++Y++D I+ L ++L + G + SD++ S+ I D +GD
Sbjct: 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSA 170
Query: 131 LNFDEF 136
++F EF
Sbjct: 171 ISFTEF 176
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYF---DLNGDGVLNFD 134
+D KEAF +++ G IT + + LGQ+ ++ E ++ ++N + F+
Sbjct: 6 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFE 64
Query: 135 EFRIMM 140
EF M+
Sbjct: 65 EFLPML 70
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDGV 130
+ N L AF++Y++D I+ L ++L + G + SD++ S+ I D +GD
Sbjct: 111 RSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSA 170
Query: 131 LNFDEF 136
++F EF
Sbjct: 171 ISFTEF 176
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYF---DLNGDGVLNFD 134
+D KEAF +++ G IT + + LGQ+ ++ E ++ ++N + F+
Sbjct: 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFE 66
Query: 135 EFRIMM 140
EF M+
Sbjct: 67 EFLPML 72
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 78 NDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD---DECKSMIAYFDLNGDGVLNFD 134
+D+K+ F + + D G I L +L D E K+++A D +G G + +
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVE 100
Query: 135 EFRIMMS 141
EF +++
Sbjct: 101 EFSTLVA 107
>pdb|3U1R|A Chain A, Structure Analysis Of A New Psychrophilic Marine Protease
Length = 480
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 112 SDDECKSMIAYFDLNGDGVLNF 133
+D +S +++DLNGDGV+N
Sbjct: 54 ADQLTRSGASWYDLNGDGVINL 75
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 76 KMNDLKEAFKMYEMDGCGCITPKSLKRMLSRL-GQSKSDDECKSM----IAYFDLNGDGV 130
+ N L AF++Y++D G I+ + ++L + G ++++ +++ + D +GDG
Sbjct: 112 RRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGA 171
Query: 131 LNFDEF 136
++F EF
Sbjct: 172 VSFVEF 177
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 74 EEKMNDLKEAFKMYE---MDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGV 130
EEK + ++ Y+ D G ++ K L +G +DD+ + D N +G
Sbjct: 95 EEKAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQ 154
Query: 131 LNFDEFRIMMS 141
++ DEF + ++
Sbjct: 155 ISRDEFLVTVN 165
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 95 ITPKSLKRML-----SRLGQSKSDDECKSMIAYFDLNGDGVLNFDEFRIMMS 141
++ K LK +L S L K D ++ D NGDG ++F EF ++++
Sbjct: 28 LSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVA 79
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 83 AFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGVLNFDE 135
F +++ DG G I+ K G SD++ + + DL+ G L+ DE
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 26.9 bits (58), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 79 DLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSD-DECKSMIAYFDLNGDGVLNFDEF 136
+L F + DG + + K L +L + D + ++ D NG GV+ FDEF
Sbjct: 134 ELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIA--YFDLNGDGVL 131
EE+ + KEAF++++ G G I ++ LGQ+ ++ E ++ D L
Sbjct: 3 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTL 62
Query: 132 NFDEFRIMM 140
F++F MM
Sbjct: 63 KFEQFLPMM 71
>pdb|1T3Q|A Chain A, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
pdb|1T3Q|D Chain D, Crystal Structure Of Quinoline 2-Oxidoreductase From
Pseudomonas Putida 86
Length = 168
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 65 VRLVEGSGEEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQ--SKSDDECKSMIA 121
+ VEG + EK+N L+++F+ + CG T L S L + + S DE + +++
Sbjct: 80 IETVEGLSQGEKLNALQDSFRRHHALQCGFCTAGMLATARSILAENPAPSRDEVREVMS 138
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 74 EEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIA--YFDLNGDGVL 131
EE+ + KEAF++++ G G I ++ LGQ+ ++ E ++ D L
Sbjct: 5 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTL 64
Query: 132 NFDEFRIMM 140
F++F MM
Sbjct: 65 KFEQFLPMM 73
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSK----SDDECKSMI--AYF--DLNGDGVL 131
+K AFK+Y++ G I + LK M+ L S+D + M+ A+ D DG +
Sbjct: 113 VKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKI 172
Query: 132 NFDEFRIMMS 141
+ DE++ +S
Sbjct: 173 DIDEWKDFVS 182
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSK----SDDECKSMI--AYF--DLNGDGVL 131
+K AFK+Y++ G I + LK M+ L S+D + M+ A+ D DG +
Sbjct: 113 VKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKI 172
Query: 132 NFDEFRIMMS 141
+ DE++ +S
Sbjct: 173 DIDEWKDFVS 182
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 100 LKRMLSRLGQSKSD----DECKSMIAYFDLNGDGVLNFDEFRIMMS 141
L ++++R K+D D +SM+A D + G L F+EF+ + +
Sbjct: 40 LNKVVTRHPDLKTDGFGIDTSRSMVAVMDSDTTGKLGFEEFKYLWN 85
>pdb|2A5Y|B Chain B, Structure Of A Ced-4CED-9 Complex
pdb|2A5Y|C Chain C, Structure Of A Ced-4CED-9 Complex
pdb|3LQQ|A Chain A, Structure Of The Ced-4 Apoptosome
pdb|3LQQ|B Chain B, Structure Of The Ced-4 Apoptosome
pdb|3LQR|A Chain A, Structure Of Ced-4:ced-3 Complex
pdb|3LQR|B Chain B, Structure Of Ced-4:ced-3 Complex
Length = 549
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 75 EKMNDLKEAFKMYEMDGCGCITP---KSLKRMLSRLGQSKSDDECKSMIAYFDLNGDGV 130
EKM L + + G CITP KSL L R + SD++ +S +A+ + GV
Sbjct: 346 EKMAQLNNKLESRGLVGVECITPYSYKSLAMALQRCVEVLSDED-RSALAFAVVMPPGV 403
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 17/74 (22%)
Query: 80 LKEAFKMYEMDGCGCITPKSLKRMLSRLGQSK-----------------SDDECKSMIAY 122
LK FK+Y+ D GCI + L ++ + + K ++ +
Sbjct: 97 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLL 156
Query: 123 FDLNGDGVLNFDEF 136
D NGDG L+ +EF
Sbjct: 157 VDENGDGQLSLNEF 170
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 3 EKHQQYERVFNHFDSNGDRRISPSEL 28
E+ Q+Y+ F FD + D +++ EL
Sbjct: 11 EEQQEYKEAFQLFDKDNDNKLTAEEL 36
>pdb|2I7A|A Chain A, Domain Iv Of Human Calpain 13
Length = 174
Score = 25.8 bits (55), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 108 GQSKSDDECKSMIAYFDLNGDGVLNFDEF 136
G S DEC+S++A +L +G L+ +EF
Sbjct: 40 GDMFSLDECRSLVALMELKVNGRLDQEEF 68
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|B Chain B, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|C Chain C, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|D Chain D, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|E Chain E, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|F Chain F, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b
Length = 113
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 81 KEAFKMYEMDGCGCITPKSLKRMLSRLGQSKSDDECKSMIAYFDLN 126
K A + Y + + + LK +S + K D+C+ +I++ D N
Sbjct: 11 KNALESYAFNXKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN 56
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 73 EEEKMNDLKEAFKMYEMDGCGCITPKSLKRMLSRLGQ-SKSDDECKSMIAYFDLNGDGVL 131
++ ++ D KEAF + + + G I L+ + +G+ + ++E +MI G +
Sbjct: 7 DQTQIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIK----EASGPI 62
Query: 132 NFDEFRIMM 140
NF F M
Sbjct: 63 NFTVFLTMF 71
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,288,288
Number of Sequences: 62578
Number of extensions: 86314
Number of successful extensions: 968
Number of sequences better than 100.0: 288
Number of HSP's better than 100.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 335
Number of HSP's gapped (non-prelim): 607
length of query: 141
length of database: 14,973,337
effective HSP length: 89
effective length of query: 52
effective length of database: 9,403,895
effective search space: 489002540
effective search space used: 489002540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)