Query 037914
Match_columns 84
No_of_seqs 134 out of 747
Neff 2.8
Searched_HMMs 29240
Date Mon Mar 25 09:11:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037914.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037914hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fey_A Phosphoglycerate kinase 99.6 4.1E-17 1.4E-21 130.5 1.4 45 32-79 348-392 (395)
2 1fw8_A PGK P72, phosphoglycera 99.6 5.2E-17 1.8E-21 130.5 1.8 46 32-80 300-345 (416)
3 1php_A 3-phosphoglycerate kina 99.6 5.7E-17 1.9E-21 129.5 1.6 44 32-78 350-393 (394)
4 3oz7_A Phosphoglycerate kinase 99.6 5.6E-17 1.9E-21 130.3 1.4 44 32-78 374-417 (417)
5 1vpe_A Phosphoglycerate kinase 99.6 5.9E-17 2E-21 129.6 1.5 45 32-79 352-396 (398)
6 1qpg_A PGK, 3-phosphoglycerate 99.6 6.4E-17 2.2E-21 129.9 1.6 45 32-79 370-414 (415)
7 3q3v_A Phosphoglycerate kinase 99.6 5.7E-17 2E-21 129.9 1.2 45 32-79 356-400 (403)
8 2wzb_A Phosphoglycerate kinase 99.6 8E-17 2.7E-21 129.4 1.8 44 32-78 372-415 (416)
9 16pk_A PGK, 3-phosphoglycerate 99.6 8.1E-17 2.8E-21 129.4 1.6 44 32-78 371-414 (415)
10 1zmr_A Phosphoglycerate kinase 99.6 5.6E-17 1.9E-21 129.4 0.6 45 32-79 340-384 (387)
11 1v6s_A Phosphoglycerate kinase 99.6 7.7E-17 2.6E-21 128.6 0.1 44 32-78 347-390 (390)
12 2cun_A Phosphoglycerate kinase 99.6 1.3E-16 4.4E-21 128.0 -0.7 44 32-79 358-401 (410)
13 3doc_A Glyceraldehyde 3-phosph 31.2 6.6 0.00022 30.5 -1.1 11 4-14 5-15 (335)
14 3v1y_O PP38, glyceraldehyde-3- 30.4 6.9 0.00024 30.4 -1.1 11 4-14 6-16 (337)
15 3ids_C GAPDH, glyceraldehyde-3 30.2 6.9 0.00024 30.7 -1.1 11 4-14 5-15 (359)
16 3lvf_P GAPDH 1, glyceraldehyde 29.5 7.3 0.00025 30.3 -1.1 11 4-14 7-17 (338)
17 3pym_A GAPDH 3, glyceraldehyde 25.1 10 0.00034 29.4 -1.0 12 3-14 3-14 (332)
18 4dib_A GAPDH, glyceraldehyde 3 23.4 11 0.00039 29.4 -1.0 12 3-14 6-17 (345)
19 2b4r_O Glyceraldehyde-3-phosph 22.8 9 0.00031 29.7 -1.7 11 5-15 15-25 (345)
No 1
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=99.63 E-value=4.1e-17 Score=130.47 Aligned_cols=45 Identities=36% Similarity=0.501 Sum_probs=43.5
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhcccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEA 79 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s 79 (84)
+|||++|++++|++|+|||||| ||||||||||||+||||+||++.
T Consensus 348 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~~ 392 (395)
T 4fey_A 348 GGDTIAAIEKFGIKDQVSYIST---AGGAFLEFLEGKKLPAIEILKEK 392 (395)
T ss_dssp SHHHHHHHHHTTCSTTSSEEEC---CSHHHHHHHTTCCCHHHHHHHHT
T ss_pred CcHHHHHHHHcCCcCCceEEcC---ChHHHHHHHcCCCchHHHHHHhh
Confidence 6999999999999999999999 99999999999999999999865
No 2
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=99.62 E-value=5.2e-17 Score=130.48 Aligned_cols=46 Identities=43% Similarity=0.603 Sum_probs=44.0
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhccccC
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEAT 80 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s~ 80 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||+++.
T Consensus 300 GGDt~aav~~~G~~d~~shiST---GGGA~LE~LEGk~LPgV~aL~~~~ 345 (416)
T 1fw8_A 300 GGDTATVAKKYGVTDKISHVST---GGGASLELLEGKELPGVAFLSEKK 345 (416)
T ss_dssp TTHHHHHHHHTTCGGGSSEECS---CSHHHHHHHTTCCCHHHHTSCSSC
T ss_pred CcHHHHHHHHcCCCCCcceecc---ccceehHhhcCCCChHHHHHHhcc
Confidence 6899999999999999999999 999999999999999999998753
No 3
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=99.62 E-value=5.7e-17 Score=129.53 Aligned_cols=44 Identities=52% Similarity=0.767 Sum_probs=42.8
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDE 78 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~ 78 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++
T Consensus 350 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~ 393 (394)
T 1php_A 350 GGDSAAAVEKFGLADKMDHIST---GGGASLEFMEGKQLPGVVALED 393 (394)
T ss_dssp SHHHHHHHHHTTCGGGSSEECS---CTHHHHHHHTTCCCHHHHTSCB
T ss_pred ChHHHHHHHHcCCCCCccEEeC---ChHHHHHHHcCCCcchHHHhhc
Confidence 6899999999999999999999 9999999999999999999986
No 4
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=99.62 E-value=5.6e-17 Score=130.31 Aligned_cols=44 Identities=45% Similarity=0.614 Sum_probs=42.6
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDE 78 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~ 78 (84)
+|||++|++++|++|+|||||| ||||||||||||+||||+||++
T Consensus 374 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~ 417 (417)
T 3oz7_A 374 GGDTASLVEQQNKKNEISHVST---GGGASLELLEGKELPGVLALSN 417 (417)
T ss_dssp SHHHHHHHHHTTCGGGSSEECS---CSHHHHHHHTTCCCHHHHTSCC
T ss_pred CcHHHHHHHHcCCcCCccEEcC---ChHHHHHHHcCCCCcceeeccC
Confidence 6899999999999999999999 9999999999999999999974
No 5
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=99.62 E-value=5.9e-17 Score=129.57 Aligned_cols=45 Identities=38% Similarity=0.587 Sum_probs=43.4
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhcccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEA 79 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s 79 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++.
T Consensus 352 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~~ 396 (398)
T 1vpe_A 352 GGDSAAAVNKFGLEDKFSHVST---GGGASLEFLEGKELPGIASMRIK 396 (398)
T ss_dssp SHHHHHHHHHTTCGGGSSEEES---CHHHHHHHHTSSCCHHHHTSCBC
T ss_pred CcHHHHHHHHcCCcCCccEEeC---ChHHHHHHHcCCCCcHHHHHHhc
Confidence 6899999999999999999999 99999999999999999999864
No 6
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=99.62 E-value=6.4e-17 Score=129.92 Aligned_cols=45 Identities=44% Similarity=0.616 Sum_probs=43.3
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhcccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEA 79 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s 79 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++.
T Consensus 370 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LEGk~LPgv~aL~~~ 414 (415)
T 1qpg_A 370 GGDTATVAKKYGVTDKISHVST---GGGASLELLEGKELPGVAFLSEK 414 (415)
T ss_dssp CHHHHHHHHHTTCGGGSSEECC---CTHHHHHHHTSCCCHHHHTSCBC
T ss_pred CcHHHHHHHHcCCCCCceEEeC---ChHHHHHHHcCCCCchHHHhhcC
Confidence 6899999999999999999999 99999999999999999999864
No 7
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=99.62 E-value=5.7e-17 Score=129.91 Aligned_cols=45 Identities=49% Similarity=0.542 Sum_probs=43.0
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhcccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEA 79 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s 79 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++.
T Consensus 356 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~~ 400 (403)
T 3q3v_A 356 GGDTADVVARAGDADEMTFIST---GGGASLELIEGKELPGVKALRSK 400 (403)
T ss_dssp SHHHHHHHHHTTCGGGSSEECC---CHHHHHHHHTTCCCHHHHTTBC-
T ss_pred CcHHHHHHHHcCCcCCccEEcC---ChHHHHHHHcCCCCcHHHHHhhh
Confidence 6899999999999999999999 99999999999999999999875
No 8
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=99.61 E-value=8e-17 Score=129.40 Aligned_cols=44 Identities=39% Similarity=0.484 Sum_probs=42.6
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDE 78 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~ 78 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++
T Consensus 372 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LEGk~LPgv~aL~~ 415 (416)
T 2wzb_A 372 GGDTATCCAKWNTEDKVSHVST---GGGASLELLEGKVLPGVDALSN 415 (416)
T ss_dssp STTHHHHHHHTTCTTSSSEEES---CSHHHHHHHHTCCCHHHHTSCB
T ss_pred CcHHHHHHHHcCCCCCceEEeC---chHHHHHHHcCCCccHHHHHhc
Confidence 6899999999999999999999 9999999999999999999975
No 9
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=99.61 E-value=8.1e-17 Score=129.43 Aligned_cols=44 Identities=48% Similarity=0.627 Sum_probs=42.8
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDE 78 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~ 78 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++
T Consensus 371 GGDt~aAv~~~G~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~ 414 (415)
T 16pk_A 371 GGDSASAAELSGEAKRMSHVST---GGGASLELLEGKTLPGVTVLDD 414 (415)
T ss_dssp SHHHHHHHHHTTCTTTSSEECS---CHHHHHHHHTTCCCHHHHTSCB
T ss_pred CcHHHHHHHHcCCccCceEEeC---ChHHHHHHHcCCCcchHHHhhc
Confidence 6899999999999999999999 9999999999999999999986
No 10
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=99.61 E-value=5.6e-17 Score=129.43 Aligned_cols=45 Identities=40% Similarity=0.547 Sum_probs=43.3
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhcccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEA 79 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s 79 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||+++
T Consensus 340 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~~ 384 (387)
T 1zmr_A 340 GGDTLAAIDLFGIADKISYIST---GGGAFLEFVEGKVLPAVAMLEER 384 (387)
T ss_dssp SHHHHHHHHHHTCGGGSSEECC---CTHHHHHHHTTCCCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCccCceEEeC---ChHHHHHHHcCCCCchHHHHHhh
Confidence 6899999999999999999999 99999999999999999999864
No 11
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=99.60 E-value=7.7e-17 Score=128.64 Aligned_cols=44 Identities=32% Similarity=0.487 Sum_probs=42.5
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDE 78 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~ 78 (84)
+|||++|++++|++|+|||||| ||||+|||||||+||||+||++
T Consensus 347 GGDt~aav~~~g~~d~~shiST---GGGA~Le~LeGk~LPgv~aL~~ 390 (390)
T 1v6s_A 347 GGDSVAAVNRLGLKERFGHVST---GGGASLEFLEKGTLPGLEVLEG 390 (390)
T ss_dssp SHHHHHHHHTTTCGGGSSEECC---SSSHHHHHHHHSCCHHHHTTCC
T ss_pred ChHHHHHHHHcCCccCceEEeC---ChHHHHHHHcCCCcchHHHhcC
Confidence 6899999999999999999999 9999999999999999999974
No 12
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=99.57 E-value=1.3e-16 Score=127.98 Aligned_cols=44 Identities=36% Similarity=0.560 Sum_probs=42.2
Q ss_pred cccHHHHHHhhCCCCccEEeecCCCCccceecccCCCCCchhhhcccc
Q 037914 32 RWRLCCHVENVGVASVMNHISTSGAGGGAGLELPEGKELPVVVAFDEA 79 (84)
Q Consensus 32 ~~DTaaAi~~~Gl~d~~sHIST~~~GGGA~LefLeGk~LPgVeAL~~s 79 (84)
+|||++|++++|+ |+|||||| ||||+|||||||+||||+||+++
T Consensus 358 GGDt~aav~~~g~-d~~shiST---GGGA~Le~LeGk~LPgv~aL~~~ 401 (410)
T 2cun_A 358 GGHSIASIQKYGI-TGITHIST---GGGAMLSFFAGEELPVLRALQIS 401 (410)
T ss_dssp CGGGGGGGGGSCC-CCCSEECS---CSHHHHHHHTTCCCHHHHHHHHH
T ss_pred ChHHHHHHHHhCC-CCcEEEcC---ChHHHHHHHcCCCCcHHHHHHHH
Confidence 6899999999999 99999999 99999999999999999999864
No 13
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=31.23 E-value=6.6 Score=30.51 Aligned_cols=11 Identities=64% Similarity=1.120 Sum_probs=9.3
Q ss_pred cccCccccCCC
Q 037914 4 KNINGFGRTGN 14 (84)
Q Consensus 4 ~~~~~~~~~~~ 14 (84)
-.||||||.|.
T Consensus 5 v~INGfGrIGr 15 (335)
T 3doc_A 5 VAINGFGRIGR 15 (335)
T ss_dssp EEEECCSHHHH
T ss_pred EEEECCCcHHH
Confidence 46999999985
No 14
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=30.43 E-value=6.9 Score=30.41 Aligned_cols=11 Identities=64% Similarity=1.129 Sum_probs=9.3
Q ss_pred cccCccccCCC
Q 037914 4 KNINGFGRTGN 14 (84)
Q Consensus 4 ~~~~~~~~~~~ 14 (84)
-.||||||.|.
T Consensus 6 v~INGfGrIGr 16 (337)
T 3v1y_O 6 IGINGFGRIGR 16 (337)
T ss_dssp EEEECCSHHHH
T ss_pred EEEECCChHHH
Confidence 46999999985
No 15
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=30.22 E-value=6.9 Score=30.74 Aligned_cols=11 Identities=64% Similarity=1.141 Sum_probs=9.3
Q ss_pred cccCccccCCC
Q 037914 4 KNINGFGRTGN 14 (84)
Q Consensus 4 ~~~~~~~~~~~ 14 (84)
-.||||||.|.
T Consensus 5 v~INGFGrIGr 15 (359)
T 3ids_C 5 VGINGFGRIGR 15 (359)
T ss_dssp EEEECTTHHHH
T ss_pred EEEECCChHHH
Confidence 46999999985
No 16
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=29.49 E-value=7.3 Score=30.33 Aligned_cols=11 Identities=64% Similarity=1.120 Sum_probs=9.2
Q ss_pred cccCccccCCC
Q 037914 4 KNINGFGRTGN 14 (84)
Q Consensus 4 ~~~~~~~~~~~ 14 (84)
-.||||||.|.
T Consensus 7 v~INGfGrIGr 17 (338)
T 3lvf_P 7 VAINGFGRIGR 17 (338)
T ss_dssp EEEECCSHHHH
T ss_pred EEEECCCcHHH
Confidence 46999999985
No 17
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=25.08 E-value=10 Score=29.43 Aligned_cols=12 Identities=58% Similarity=1.068 Sum_probs=9.8
Q ss_pred ccccCccccCCC
Q 037914 3 QKNINGFGRTGN 14 (84)
Q Consensus 3 ~~~~~~~~~~~~ 14 (84)
.-.||||||.|.
T Consensus 3 kv~INGfGrIGr 14 (332)
T 3pym_A 3 RVAINGFGRIGR 14 (332)
T ss_dssp EEEEECCSHHHH
T ss_pred EEEEECCCcHHH
Confidence 457999999985
No 18
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=23.43 E-value=11 Score=29.38 Aligned_cols=12 Identities=58% Similarity=1.068 Sum_probs=9.8
Q ss_pred ccccCccccCCC
Q 037914 3 QKNINGFGRTGN 14 (84)
Q Consensus 3 ~~~~~~~~~~~~ 14 (84)
.-.||||||.|.
T Consensus 6 kv~INGfGrIGr 17 (345)
T 4dib_A 6 RVAINGFGRIGR 17 (345)
T ss_dssp EEEEECCSHHHH
T ss_pred EEEEECCCcHHH
Confidence 346999999985
No 19
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=22.85 E-value=9 Score=29.68 Aligned_cols=11 Identities=64% Similarity=1.126 Sum_probs=9.6
Q ss_pred ccCccccCCCc
Q 037914 5 NINGFGRTGNR 15 (84)
Q Consensus 5 ~~~~~~~~~~~ 15 (84)
.||||||-|.+
T Consensus 15 ~INGfGrIGr~ 25 (345)
T 2b4r_O 15 GINGFGRIGRL 25 (345)
T ss_dssp EEECCSHHHHH
T ss_pred EEeCCchHHHH
Confidence 59999999965
Done!