BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037916
(741 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 153/307 (49%), Gaps = 22/307 (7%)
Query: 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNA-SKLEVFQVTSNNLTGE 60
++ N+ G IP L +L +LSL N+ TG IP + A L ++ N+ G
Sbjct: 250 NISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 306
Query: 61 VPSEFGKATKAYCVQNCNQH---------------LKHLDINNNNFGGLLPGCICNFSIT 105
VP FG + + + + LK LD++ N F G LP + N S +
Sbjct: 307 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 366
Query: 106 LETLIFNSNKIFRSIPAGIGKFIN--LQTLHMWDNQLSGTISPAIGELQNLVTLAINTNK 163
L TL +SN I + + LQ L++ +N +G I P + LV+L ++ N
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 164 LSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDL 223
LSG IP S+G+L KL L L N L+ IP L ++L T+ L +N+L+G IP L +
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 486
Query: 224 TSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGN 283
T+L+ + LS N+L G +P +G+L NL IL +S N I + LG C L L L N
Sbjct: 487 TNLNW-ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 284 LFQGPIP 290
LF G IP
Sbjct: 546 LFNGTIP 552
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 150/363 (41%), Gaps = 42/363 (11%)
Query: 31 NQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN 90
N TG IP ++ N S+L ++ N L+G +PS G +K L+ L + N
Sbjct: 401 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK----------LRDLKLWLNM 450
Query: 91 FGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGE 150
G +P + + TLETLI + N + IP+G+ NL + + +N+L+G I IG
Sbjct: 451 LEGEIPQELM-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Query: 151 LQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINL--- 207
L+NL L ++ N SGNIP +G+ + L+ L L N +IP+++ + N
Sbjct: 510 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 569
Query: 208 ----------------SYNNL---SGTIPPQLMDLTSLSVGLDLSRNQLVGSLPT--EVG 246
NL G QL L++ + SR + PT G
Sbjct: 570 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 629
Query: 247 KLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXXXXXXXXXXQ 306
++ L++ S NML I +GS L L LG N G IP
Sbjct: 630 SMMFLDM---SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 307 NNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGIPEFQL 366
N + G IP+ S N+L G IP G F+ N LCG + L
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPL 742
Query: 367 PIC 369
P C
Sbjct: 743 PRC 745
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 149/343 (43%), Gaps = 19/343 (5%)
Query: 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEV 61
DV N GIP F L L + N+++G ++ ++L++ ++SN G +
Sbjct: 203 DVSSNNFSTGIP--FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 260
Query: 62 PSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIP 121
P K+ L++L + N F G +P + TL L + N + ++P
Sbjct: 261 PPLPLKS------------LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 308
Query: 122 AGIGKFINLQTLHMWDNQLSGTIS-PAIGELQNLVTLAINTNKLSGNIPPSIGNLK-KLL 179
G L++L + N SG + + +++ L L ++ N+ SG +P S+ NL LL
Sbjct: 309 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 368
Query: 180 QLYLIENFLQVSIPSSLGQC--QSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQL 237
L L N I +L Q +L + L N +G IPP L + + L V L LS N L
Sbjct: 369 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL-VSLHLSFNYL 427
Query: 238 VGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXX 297
G++P+ +G L L L + NMLE EI L LE L L N G IP
Sbjct: 428 SGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 487
Query: 298 XXXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPTE 340
N ++GEIPK+ S N G IP E
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 133/315 (42%), Gaps = 34/315 (10%)
Query: 23 LLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLK 82
L+ L L FN ++G IPSS+ + SKL ++ N L GE+P E + L+
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV----------KTLE 466
Query: 83 HLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSG 142
L ++ N+ G +P + N + L + ++N++ IP IG+ NL L + +N SG
Sbjct: 467 TLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 525
Query: 143 TISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSS------- 195
I +G+ ++L+ L +NTN +G IP ++ + I V I +
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 585
Query: 196 ---------------LGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS 240
L + + N++ G P + S+ LD+S N L G
Sbjct: 586 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMF-LDMSYNMLSGY 644
Query: 241 LPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXXXXX 300
+P E+G + L IL + N + I +G L L L N G IP
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 301 XXXXXQNNISGEIPK 315
NN+SG IP+
Sbjct: 705 EIDLSNNNLSGPIPE 719
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 40/280 (14%)
Query: 5 VNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSE 64
+N ++G IP + + + L L L FN +TG IPS + N + L +++N LTGE+P
Sbjct: 448 LNMLEGEIPQELMY-VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 506
Query: 65 FGKATKAYCVQNCN--------------QHLKHLDINNNNFGGLLPGCI--------CNF 102
G+ ++ N + L LD+N N F G +P + NF
Sbjct: 507 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 566
Query: 103 SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWD-NQLS-------------GTISPAI 148
I + ++ N + G G + Q + N+LS G SP
Sbjct: 567 -IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 149 GELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLS 208
+++ L ++ N LSG IP IG++ L L L N + SIP +G + L ++LS
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 685
Query: 209 YNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKL 248
N L G IP + LT L+ +DLS N L G +P E+G+
Sbjct: 686 SNKLDGRIPQAMSALTMLTE-IDLSNNNLSGPIP-EMGQF 723
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 164/390 (42%), Gaps = 55/390 (14%)
Query: 7 RVQGGIPLDFGFTLPNLLFLSLGFNQITG--VIPSSMFNA-SKLEVFQVTSNNLTGEVPS 63
+V GG+ L+ +L L L N I+G V+ + + +L+ ++ N ++G+V
Sbjct: 140 KVSGGLKLN------SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-- 191
Query: 64 EFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG 123
+ CV +L+ LD+++NNF +P L+ L + NK+
Sbjct: 192 -----DVSRCV-----NLEFLDVSSNNFSTGIP--FLGDCSALQHLDISGNKLSGDFSRA 239
Query: 124 IGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSI-GNLKKLLQLY 182
I L+ L++ NQ G I P L++L L++ NK +G IP + G L L
Sbjct: 240 ISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 297
Query: 183 LIENFLQVSIPSSLG-------------------------QCQSLTTINLSYNNLSGTIP 217
L N ++P G + + L ++LS+N SG +P
Sbjct: 298 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 357
Query: 218 PQLMDLTSLSVGLDLSRNQLVGS-LPTEVGKLIN-LEILFISRNMLECEILSTLGSCIKL 275
L +L++ + LDLS N G LP N L+ L++ N +I TL +C +L
Sbjct: 358 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 417
Query: 276 EQLKLGGNLFQGPIPXXXXXXXXXXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEG 335
L L N G IP N + GEIP+ +NDL G
Sbjct: 418 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 477
Query: 336 VIPTE-GVFKNASAISVFGNSKLCGGIPEF 364
IP+ N + IS+ N++L G IP++
Sbjct: 478 EIPSGLSNCTNLNWISL-SNNRLTGEIPKW 506
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 71/205 (34%), Gaps = 37/205 (18%)
Query: 190 VSIPSSLGQCQSLTTINLSYNNLSGTIPPQL---MDLTSLSVGLDLSRNQLVG------- 239
V+ +SLG C L +N+S N L P ++ + L SL V LDLS N + G
Sbjct: 113 VTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEV-LDLSANSISGANVVGWV 169
Query: 240 ------------------SLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLG 281
S +V + +NLE L +S N I LG C L+ L +
Sbjct: 170 LSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDIS 228
Query: 282 GNLFQGPIPXXXXXXXXXXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPT-- 339
GN G N G IP + N G IP
Sbjct: 229 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 286
Query: 340 EGVFKNASAISVFGNSKLCGGIPEF 364
G + + + GN G +P F
Sbjct: 287 SGACDTLTGLDLSGN-HFYGAVPPF 310
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 153/307 (49%), Gaps = 22/307 (7%)
Query: 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNA-SKLEVFQVTSNNLTGE 60
++ N+ G IP L +L +LSL N+ TG IP + A L ++ N+ G
Sbjct: 253 NISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309
Query: 61 VPSEFGKATKAYCVQNCNQH---------------LKHLDINNNNFGGLLPGCICNFSIT 105
VP FG + + + + LK LD++ N F G LP + N S +
Sbjct: 310 VPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS 369
Query: 106 LETLIFNSNKIFRSIPAGIGKFI--NLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNK 163
L TL +SN I + + LQ L++ +N +G I P + LV+L ++ N
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 164 LSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDL 223
LSG IP S+G+L KL L L N L+ IP L ++L T+ L +N+L+G IP L +
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489
Query: 224 TSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGN 283
T+L+ + LS N+L G +P +G+L NL IL +S N I + LG C L L L N
Sbjct: 490 TNLNW-ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 284 LFQGPIP 290
LF G IP
Sbjct: 549 LFNGTIP 555
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 150/363 (41%), Gaps = 42/363 (11%)
Query: 31 NQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNN 90
N TG IP ++ N S+L ++ N L+G +PS G +K L+ L + N
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK----------LRDLKLWLNM 453
Query: 91 FGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGE 150
G +P + + TLETLI + N + IP+G+ NL + + +N+L+G I IG
Sbjct: 454 LEGEIPQELM-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 151 LQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINL--- 207
L+NL L ++ N SGNIP +G+ + L+ L L N +IP+++ + N
Sbjct: 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 572
Query: 208 ----------------SYNNL---SGTIPPQLMDLTSLSVGLDLSRNQLVGSLPT--EVG 246
NL G QL L++ + SR + PT G
Sbjct: 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632
Query: 247 KLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXXXXXXXXXXQ 306
++ L++ S NML I +GS L L LG N G IP
Sbjct: 633 SMMFLDM---SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 307 NNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPTEGVFKNASAISVFGNSKLCGGIPEFQL 366
N + G IP+ S N+L G IP G F+ N LCG + L
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG----YPL 745
Query: 367 PIC 369
P C
Sbjct: 746 PRC 748
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 149/343 (43%), Gaps = 19/343 (5%)
Query: 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEV 61
DV N GIP F L L + N+++G ++ ++L++ ++SN G +
Sbjct: 206 DVSSNNFSTGIP--FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 62 PSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIP 121
P K+ L++L + N F G +P + TL L + N + ++P
Sbjct: 264 PPLPLKS------------LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311
Query: 122 AGIGKFINLQTLHMWDNQLSGTIS-PAIGELQNLVTLAINTNKLSGNIPPSIGNLK-KLL 179
G L++L + N SG + + +++ L L ++ N+ SG +P S+ NL LL
Sbjct: 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLL 371
Query: 180 QLYLIENFLQVSIPSSLGQC--QSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQL 237
L L N I +L Q +L + L N +G IPP L + + L V L LS N L
Sbjct: 372 TLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL-VSLHLSFNYL 430
Query: 238 VGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXX 297
G++P+ +G L L L + NMLE EI L LE L L N G IP
Sbjct: 431 SGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT 490
Query: 298 XXXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPTE 340
N ++GEIPK+ S N G IP E
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 134/315 (42%), Gaps = 34/315 (10%)
Query: 23 LLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLK 82
L+ L L FN ++G IPSS+ + SKL ++ N L GE+P E + L+
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYV----------KTLE 469
Query: 83 HLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSG 142
L ++ N+ G +P + N + L + ++N++ IP IG+ NL L + +N SG
Sbjct: 470 TLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSG 528
Query: 143 TISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSS------- 195
I +G+ ++L+ L +NTN +G IP ++ + I V I +
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECH 588
Query: 196 ---------------LGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGS 240
L + + N++ G P + S+ + LD+S N L G
Sbjct: 589 GAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM-MFLDMSYNMLSGY 647
Query: 241 LPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXXXXX 300
+P E+G + L IL + N + I +G L L L N G IP
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 301 XXXXXQNNISGEIPK 315
NN+SG IP+
Sbjct: 708 EIDLSNNNLSGPIPE 722
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 127/280 (45%), Gaps = 40/280 (14%)
Query: 5 VNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSE 64
+N ++G IP + + + L L L FN +TG IPS + N + L +++N LTGE+P
Sbjct: 451 LNMLEGEIPQELMY-VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW 509
Query: 65 FGKATKAYCVQNCN--------------QHLKHLDINNNNFGGLLPGCI--------CNF 102
G+ ++ N + L LD+N N F G +P + NF
Sbjct: 510 IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANF 569
Query: 103 SITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWD-NQLS-------------GTISPAI 148
I + ++ N + G G + Q + N+LS G SP
Sbjct: 570 -IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 149 GELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLS 208
+++ L ++ N LSG IP IG++ L L L N + SIP +G + L ++LS
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688
Query: 209 YNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKL 248
N L G IP + LT L+ +DLS N L G +P E+G+
Sbjct: 689 SNKLDGRIPQAMSALTMLTE-IDLSNNNLSGPIP-EMGQF 726
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 164/390 (42%), Gaps = 55/390 (14%)
Query: 7 RVQGGIPLDFGFTLPNLLFLSLGFNQITG--VIPSSMFNA-SKLEVFQVTSNNLTGEVPS 63
+V GG+ L+ +L L L N I+G V+ + + +L+ ++ N ++G+V
Sbjct: 143 KVSGGLKLN------SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV-- 194
Query: 64 EFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG 123
+ CV +L+ LD+++NNF +P L+ L + NK+
Sbjct: 195 -----DVSRCV-----NLEFLDVSSNNFSTGIP--FLGDCSALQHLDISGNKLSGDFSRA 242
Query: 124 IGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSI-GNLKKLLQLY 182
I L+ L++ NQ G I P L++L L++ NK +G IP + G L L
Sbjct: 243 ISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLD 300
Query: 183 LIENFLQVSIPSSLG-------------------------QCQSLTTINLSYNNLSGTIP 217
L N ++P G + + L ++LS+N SG +P
Sbjct: 301 LSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360
Query: 218 PQLMDLTSLSVGLDLSRNQLVGS-LPTEVGKLIN-LEILFISRNMLECEILSTLGSCIKL 275
L +L++ + LDLS N G LP N L+ L++ N +I TL +C +L
Sbjct: 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSEL 420
Query: 276 EQLKLGGNLFQGPIPXXXXXXXXXXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEG 335
L L N G IP N + GEIP+ +NDL G
Sbjct: 421 VSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480
Query: 336 VIPTE-GVFKNASAISVFGNSKLCGGIPEF 364
IP+ N + IS+ N++L G IP++
Sbjct: 481 EIPSGLSNCTNLNWISL-SNNRLTGEIPKW 509
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 71/205 (34%), Gaps = 37/205 (18%)
Query: 190 VSIPSSLGQCQSLTTINLSYNNLSGTIPPQL---MDLTSLSVGLDLSRNQLVG------- 239
V+ +SLG C L +N+S N L P ++ + L SL V LDLS N + G
Sbjct: 116 VTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEV-LDLSANSISGANVVGWV 172
Query: 240 ------------------SLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLG 281
S +V + +NLE L +S N I LG C L+ L +
Sbjct: 173 LSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI-PFLGDCSALQHLDIS 231
Query: 282 GNLFQGPIPXXXXXXXXXXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPT-- 339
GN G N G IP + N G IP
Sbjct: 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFL 289
Query: 340 EGVFKNASAISVFGNSKLCGGIPEF 364
G + + + GN G +P F
Sbjct: 290 SGACDTLTGLDLSGN-HFYGAVPPF 313
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 142/295 (48%), Gaps = 29/295 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G FG VYKG L +G T++AVK L G E + H+NL+++ C
Sbjct: 49 GGFGKVYKGRLADG-TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 107
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+ LVY +M NGS+ S + E+ L++ +R IA+ A L YLH
Sbjct: 108 TER-----LLVYPYMANGSV------ASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
C P H D+K +N+LLD E A V DFGLAKL+ V+GTIG+IAP EY
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRGTIGHIAP-EY 214
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLL 649
+ S DV+ YG++LLEL+T +R D+ L N +L D V ++ L
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAFDL-----ARLANDDDVMLLDWVKGLLKEKKL 269
Query: 650 ADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704
D+ + N + E + ++++ + C+ SP +R M+ VV L+
Sbjct: 270 EALVDVDLQGNYKD---------EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 137/294 (46%), Gaps = 27/294 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG VYKG L +G + ++ G E + H+NL+++ C
Sbjct: 41 GGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 100
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ LVY +M NGS+ L + E+ L++ +R IA+ A L YLH
Sbjct: 101 ER-----LLVYPYMANGSVASCLR------ERPESQPPLDWPKRQRIALGSARGLAYLHD 149
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
C P H D+K +N+LLD E A V DFGLAKL+ V+G IG+IAP EY
Sbjct: 150 HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX-AVRGXIGHIAP-EYL 207
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
+ S DV+ YG++LLEL+T +R D+ L N +L D V ++ L
Sbjct: 208 STGKSSEKTDVFGYGVMLLELITGQRAFDL-----ARLANDDDVMLLDWVKGLLKEKKLE 262
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704
D+ + N + E + ++++ + C+ SP +R M+ VV L+
Sbjct: 263 ALVDVDLQGNYKD---------EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL----NLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G FG VYKG ++ T +AVK L ++ + E + +H+NLV++L
Sbjct: 42 GGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL--- 96
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G GDD LVY +M NGSL + L + G P L++ R IA A +
Sbjct: 97 -GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGT-----PP--LSWHMRCKIAQGAANGIN 147
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
+LH + H D+K +N+LLD TA ++DFGLA+ + GT Y+AP
Sbjct: 148 FLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMT 613
L E++ D+YS+G++LLE++T
Sbjct: 205 E--ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL----NLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G FG VYKG ++ T +AVK L ++ + E + +H+NLV++L
Sbjct: 36 GGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL--- 90
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G GDD LVY +M NGSL + L + G L++ R IA A +
Sbjct: 91 -GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPP-------LSWHMRCKIAQGAANGIN 141
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
+LH + H D+K +N+LLD TA ++DFGLA+ + GT Y+AP
Sbjct: 142 FLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMT 613
L E++ D+YS+G++LLE++T
Sbjct: 199 E--ALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL----NLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G FG VYKG ++ T +AVK L ++ + E + +H+NLV++L
Sbjct: 42 GGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL--- 96
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G GDD LVY +M NGSL + L + G P L++ R IA A +
Sbjct: 97 -GFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGT-----PP--LSWHMRCKIAQGAANGIN 147
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
+LH + H D+K +N+LLD TA ++DFGLA+ + GT Y+AP
Sbjct: 148 FLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMT 613
L E++ D+YS+G++LLE++T
Sbjct: 205 E--ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 19 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 73
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L +G K L Q +++A +A + Y+
Sbjct: 74 ---EEPIXIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAYVE- 121
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ + T+ G K I + AP E
Sbjct: 122 --RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAP-EAA 177
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 215
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 216 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 249
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 130/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 22 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 76
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L +G K L Q +++A +A + Y+
Sbjct: 77 ---EEPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAYVE- 124
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 125 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 180
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 218
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 219 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 252
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 22/208 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG VYKG+L +G + A+K + E L RH +LV ++ C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC- 104
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
D + + L+Y++M NG+L+ L+ G+D + +++ QR+ I I A L Y
Sbjct: 105 --DERNE--MILIYKYMENGNLKRHLY---GSDLPTMS---MSWEQRLEICIGAARGLHY 154
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKL---LPPAHLQTSSIGVKGTIGYI 584
LH H D+K N+LLD + DFG++K L HL VKGT+GYI
Sbjct: 155 LH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV---VKGTLGYI 208
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELM 612
P EY + ++ DVYS+G++L E++
Sbjct: 209 DP-EYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 26 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 80
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M+ GSL ++L +G K L Q ++++ +A + Y+
Sbjct: 81 ---EEPIYIVTEYMNKGSLLDFLKGETG--------KYLRLPQLVDMSAQIASGMAYVE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 129 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-TARQGAKFPIKWTAP-EAA 184
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 222
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 223 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 256
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 21/209 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
++ +V E+M GSL ++L +G K L Q +++A +A + Y
Sbjct: 250 ------EEPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAY 295
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+ + H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP- 350
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E L +I DV+S+GILL EL T+ R
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 21/209 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
++ +V E+M GSL ++L +G K L Q +++A +A + Y
Sbjct: 250 ------EEPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAY 295
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+ + H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP- 350
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E L +I DV+S+GILL EL T+ R
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 22/208 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG VYKG+L +G + A+K + E L RH +LV ++ C
Sbjct: 47 IGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC- 104
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
D + + L+Y++M NG+L+ L+ G+D + +++ QR+ I I A L Y
Sbjct: 105 --DERNE--MILIYKYMENGNLKRHLY---GSDLPTMS---MSWEQRLEICIGAARGLHY 154
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKL---LPPAHLQTSSIGVKGTIGYI 584
LH H D+K N+LLD + DFG++K L HL VKGT+GYI
Sbjct: 155 LH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV---VKGTLGYI 208
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELM 612
P EY + ++ DVYS+G++L E++
Sbjct: 209 DP-EYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ IRH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVTEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR 616
L +I DV+S+GILL EL T+ R
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 52/286 (18%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
++ +V E+M GSL ++L +G K L Q +++A +A + Y
Sbjct: 333 ------EEPIYIVTEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAY 378
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+ + H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP
Sbjct: 379 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP- 433
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDST 647
E L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 434 EAALYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL----------- 474
Query: 648 LLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 475 ------------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 508
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 26 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 80
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M+ GSL ++L +G K L Q ++++ +A + Y+
Sbjct: 81 ---EEPIYIVTEYMNKGSLLDFLKGETG--------KYLRLPQLVDMSAQIASGMAYVE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 129 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 184
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 222
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 223 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKEPEER 256
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 21/209 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
++ +V E+M GSL ++L +G K L Q +++A +A + Y
Sbjct: 250 ------EEPIYIVGEYMSKGSLLDFLKGETG--------KYLRLPQLVDMAAQIASGMAY 295
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+ + H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP
Sbjct: 296 VE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP- 350
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E L +I DV+S+GILL EL T+ R
Sbjct: 351 EAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 18 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 72
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 73 ---EEPIYIVTEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 120
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 121 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 176
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 214
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 215 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKDPEER 248
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 11/247 (4%)
Query: 77 CNQHLKHLDINNNNFGGL-------LPGCICNFSITLETLIFNSNKIFRSIPAGIGKFIN 129
C+ + +NN + GL +P + N I N + IP I K
Sbjct: 43 CDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQ 102
Query: 130 LQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQ 189
L L++ +SG I + +++ LVTL + N LSG +PPSI +L L+ + N +
Sbjct: 103 LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 190 VSIPSSLGQCQSL-TTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKL 248
+IP S G L T++ +S N L+G IPP +L V DLSRN L G G
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFV--DLSRNMLEGDASVLFGSD 220
Query: 249 INLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXXXXXXXXXXQNN 308
N + + +++N L + L +G L L L N G +P NN
Sbjct: 221 KNTQKIHLAKNSLAFD-LGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 309 ISGEIPK 315
+ GEIP+
Sbjct: 280 LCGEIPQ 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 7/251 (2%)
Query: 120 IPAGIGKFINLQTLHMWD-NQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKL 178
IP+ + L L++ N L G I PAI +L L L I +SG IP + +K L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 179 LQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLV 238
+ L N L ++P S+ +L I N +SG IP + L + +SRN+L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 239 GSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLKLGGNLFQGPIPXXXXXXXX 298
G +P L NL + +SRNMLE + GS +++ L N +
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 299 XXXXXXXQNNISGEIPKFXXXXXXXXXXXXSYNDLEGVIPTEGVFKNASAISVFGNSKLC 358
N I G +P+ S+N+L G IP G + +S + N+K
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD-VSAYANNKCL 304
Query: 359 GGIPEFQLPIC 369
G P LP C
Sbjct: 305 CGSP---LPAC 312
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Query: 4 GVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPS 63
G+N + G IP L L +L + ++G IP + L + N L+G +P
Sbjct: 85 GINNLVGPIPPAIA-KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPP 143
Query: 64 EFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG 123
+L + + N G +P +FS ++ + N++ IP
Sbjct: 144 SISSL----------PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT 193
Query: 124 IGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYL 183
+NL + + N L G S G +N + + N L+ ++ +G K L L L
Sbjct: 194 FAN-LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDL 251
Query: 184 IENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIP 217
N + ++P L Q + L ++N+S+NNL G IP
Sbjct: 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 28/184 (15%)
Query: 2 DVGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKL-EVFQVTSNNLTGE 60
D N + G +P +LPNL+ ++ N+I+G IP S + SKL ++ N LTG+
Sbjct: 131 DFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189
Query: 61 VPSEFGKATKAYCVQNCNQHLKHLDINNNNFGG---LLPGCICN---FSITLETLIFNSN 114
+P F N +L +D++ N G +L G N + +L F+
Sbjct: 190 IPPTFA-----------NLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238
Query: 115 KIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGN 174
K+ G+ K NL L + +N++ GT+ + +L+ L +L ++ N L G IP GN
Sbjct: 239 KV------GLSK--NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GN 289
Query: 175 LKKL 178
L++
Sbjct: 290 LQRF 293
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 20 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 74
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 75 ---EEPIYIVTEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 122
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 123 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 178
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 216
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 217 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKDPEER 250
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVIEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR 616
L +I DV+S+GILL EL T+ R
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVIEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR 616
L +I DV+S+GILL EL T+ R
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVTEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR 616
L +I DV+S+GILL EL T+ R
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVCEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 225
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 226 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL----NLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G FG VYKG ++ T +AVK L ++ + E +H+NLV++L
Sbjct: 33 GGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL--- 87
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G GDD LVY + NGSL + L + G L++ R IA A +
Sbjct: 88 -GFSSDGDDL-CLVYVYXPNGSLLDRLSCLDGTPP-------LSWHXRCKIAQGAANGIN 138
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
+LH + H D+K +N+LLD TA ++DFGLA+ + GT Y AP
Sbjct: 139 FLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMT 613
L E++ D+YS+G++LLE++T
Sbjct: 196 E--ALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 21/209 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G FG V+ G + G T +A+K L + + ++ + E ++ +RH+ LV++ V S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
++ +V E+M GSL ++L G K L Q +++A +A + Y
Sbjct: 251 ------EEPIYIVTEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAY 296
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+ + H DL+ +N+L+ + VADFGL +L+ T+ G K I + AP
Sbjct: 297 VE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY-TARQGAKFPIKWTAP- 351
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E L +I DV+S+GILL EL T+ R
Sbjct: 352 EAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + +S + E ++ ++H LV++ V S
Sbjct: 20 GQFGEVWMGTWN-GNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVS--- 74
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M+ GSL ++L G + L +++A VA + Y+
Sbjct: 75 ---EEPIYIVTEYMNKGSLLDFLKDGEG--------RALKLPNLVDMAAQVAAGMAYIE- 122
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + + +ADFGLA+L+ T+ G K I + AP E
Sbjct: 123 --RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE-XTARQGAKFPIKWTAP-EAA 178
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL+T+ R + + G N R VL
Sbjct: 179 LYGRFTIKSDVWSFGILLTELVTKGR---VPYPGMNN-----REVL-------------- 216
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
Q +R R+ +C IS+ + + C + P++R
Sbjct: 217 ---------EQVERGYRMPCPQDCPISLHELMIHCWKKDPEER 250
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M GSL ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVTEYMSKGSLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 225
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 226 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 114/222 (51%), Gaps = 25/222 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I GSFG+V++ + + +AVK+L H + E + ++ +RH N+V +
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM-- 100
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
G + + ++V E++ GSL LH SGA + L+ +R+++A DVA +
Sbjct: 101 --GAVTQPPNL-SIVTEYLSRGSLYRLLH-KSGAREQ------LDERRRLSMAYDVAKGM 150
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH+ P H +LK N+L+D + T V DFGL++L L SS GT ++A
Sbjct: 151 NYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMA 207
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
P E + DVYS+G++L EL T ++P GN+N
Sbjct: 208 P-EVLRDEPSNEKSDVYSFGVILWELATLQQPW-----GNLN 243
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 30 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 84
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 85 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 131
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 132 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA 187
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 188 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 117/232 (50%), Gaps = 24/232 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +AVK L + + +AE + ++ ++H+ LV++ V +
Sbjct: 33 GQFGEVWMGYYN-GHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--- 87
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 88 ---QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFIE- 135
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ ++ +ADFGLA+L+ + T+ G K I + AP
Sbjct: 136 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAIN 192
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 193 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 243
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 24/232 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +AVK L + + +AE + ++ ++H+ LV++ V +
Sbjct: 30 GQFGEVWMGYYN-GHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 85 ---QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFIE- 132
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAIN 189
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 190 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 25/222 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I GSFG+V++ + + +AVK+L H + E + ++ +RH N+V +
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ ++V E++ GSL LH SGA + L+ +R+++A DVA +
Sbjct: 103 VTQPPNL-----SIVTEYLSRGSLYRLLH-KSGAREQ------LDERRRLSMAYDVAKGM 150
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH+ P H DLK N+L+D + T V DFGL++L L + GT ++A
Sbjct: 151 NYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEWMA 207
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
P E + DVYS+G++L EL T ++P GN+N
Sbjct: 208 P-EVLRDEPSNEKSDVYSFGVILWELATLQQPW-----GNLN 243
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 29 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 83
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 84 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 130
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 131 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA 186
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 187 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 24/232 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +AVK L + + +AE + ++ ++H+ LV++ V +
Sbjct: 32 GQFGEVWMGYYN-GHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--- 86
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 87 ---QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFIE- 134
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 135 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEAIN 191
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 192 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 242
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 19 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 73
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 74 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 120
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 121 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA 176
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 177 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 229
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 25 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 79
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 80 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 126
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 127 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIKWTAPEA 182
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 183 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 235
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 24/232 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +AVK L + + +AE + ++ ++H+ LV++ V +
Sbjct: 26 GQFGEVWMGYYN-GHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--- 80
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 81 ---QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFIE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIKWTAPEAIN 185
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 186 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 236
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 24 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 79 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 125
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA 181
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 24 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 79 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 125
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-TAREGAKFPIKWTAPEA 181
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M G L ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVMEYMSKGCLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR 616
L +I DV+S+GILL EL T+ R
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 52/283 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +A+K L + ++ + E ++ +RH+ LV++ V S
Sbjct: 29 GCFGEVWMGTWN-GTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ +V E+M G L ++L G K L Q +++A +A + Y+
Sbjct: 84 ---EEPIYIVTEYMSKGCLLDFLKGEMG--------KYLRLPQLVDMAAQIASGMAYVE- 131
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +N+L+ + VADFGLA+L+ T+ G K I + AP E
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TARQGAKFPIKWTAP-EAA 187
Query: 591 LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLA 650
L +I DV+S+GILL EL T+ R + + G +N R VL
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGR---VPYPGMVN-----REVL-------------- 225
Query: 651 DDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDR 693
+Q +R R+ EC S+ + C + P++R
Sbjct: 226 ---------DQVERGYRMPCPPECPESLHDLMCQCWRKDPEER 259
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 34 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 88
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 89 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 135
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 136 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEA 191
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 192 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 244
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G FG V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 24 GQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 79 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 125
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTAREGAKFPIKWTAPEA 181
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G G V+ G + G T +AVK L G+ + +AE + ++ ++H+ LV++ V +
Sbjct: 24 GQAGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT- 78
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 79 -----QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFI 125
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DL+ +N+L+ ++ +ADFGLA+L+ A T+ G K I + AP
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-TAREGAKFPIKWTAPEA 181
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 182 INYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 116/232 (50%), Gaps = 24/232 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + G T +AVK L + + +AE + ++ ++H+ LV++ V +
Sbjct: 20 GQFGEVWMGYYN-GHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVT--- 74
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ ++ E+M NGSL ++L SG T+ + +++A +A + ++
Sbjct: 75 ---QEPIYIITEYMENGSLVDFLKTPSGIKLTIN--------KLLDMAAQIAEGMAFIE- 122
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H +L+ +N+L+ ++ +ADFGLA+L+ T+ G K I + AP
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAIN 179
Query: 591 LGSEVSINGDVYSYGILLLELMTRKR---PSDIMFEGNMNLHNFARTVLPDH 639
G+ +I DV+S+GILL E++T R P E NL R V PD+
Sbjct: 180 YGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 27/209 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ ++ T +AVK + + ++ +AE + ++ ++H LVK+ V +
Sbjct: 26 GQFGEVWMATYNK-HTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT--- 80
Query: 471 YKGDDFKALVY---EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K +Y EFM GSL ++L G+ + + PK ++F +I + Y
Sbjct: 81 ------KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY 132
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+H D L+ +N+L+ + +ADFGLA+++ T+ G K I + AP
Sbjct: 133 IHRD---------LRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPE 182
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
GS +I DV+S+GILL+E++T R
Sbjct: 183 AINFGS-FTIKSDVWSFGILLMEIVTYGR 210
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 27/209 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ ++ T +AVK + ++ +AE + ++ ++H LVK+ V +
Sbjct: 199 GQFGEVWMATYNK-HTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT--- 253
Query: 471 YKGDDFKALVY---EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K +Y EFM GSL ++L G+ + + PK ++F +I + Y
Sbjct: 254 ------KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY 305
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+H D L+ +N+L+ + +ADFGLA+++ T+ G K I + AP
Sbjct: 306 IHRD---------LRAANILVSASLVCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPE 355
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
GS +I DV+S+GILL+E++T R
Sbjct: 356 AINFGS-FTIKSDVWSFGILLMEIVTYGR 383
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 85 -REPPFYIII-EFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 133
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 191 Y-NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 80
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 81 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 129
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 186
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 187 Y-NKFSIKSDVWAFGVLLWEIAT 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 80
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 81 -REPPFYIII-EFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 129
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 130 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 186
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 187 Y-NKFSIKSDVWAFGVLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 85 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 133
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 191 Y-NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 85 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 133
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 190
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 191 Y-NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 80 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 186 Y-NKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 92
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 93 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 141
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 142 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 198
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 199 Y-NKFSIKSDVWAFGVLLWEIAT 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 81
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 82 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 130
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLA 187
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 188 Y-NKFSIKSDVWAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 85 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 133
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 191 Y-NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 80 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 186 Y-NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 81
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 82 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 130
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 187
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 188 Y-NKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 83
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 84 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 132
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 133 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 189
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 190 Y-NKFSIKSDVWAFGVLLWEIAT 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 81
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 82 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 130
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 131 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 187
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 188 Y-NKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 77
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 78 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 126
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 184 Y-NKFSIKSDVWAFGVLLWEIAT 205
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI--AECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+L ++ + E + LR RH N++ +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFM-- 98
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y D A+V ++ SL + LH V+ K Q I+IA A +
Sbjct: 99 ----GYMTKDNLAIVTQWCEGSSLYKHLH--------VQETK-FQMFQLIDIARQTAQGM 145
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH H D+K +N+ L +T + DFGLA + G++ ++A
Sbjct: 146 DYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 586 PAEYGL--GSEVSINGDVYSYGILLLELMTRKRP 617
P + + S DVYSYGI+L ELMT + P
Sbjct: 203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ EF+ GSL E+L + ++ K L + +I +
Sbjct: 77 VKYKGVCYSA---GRRNLKLIMEFLPYGSLREYLQK---HKERIDHIKLLQYTSQICKGM 130
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 131 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 180
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 181 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 37/209 (17%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ ++ T +AVK + ++ +AE + ++ ++H LVK+ V +
Sbjct: 193 GQFGEVWMATYNK-HTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT--- 247
Query: 471 YKGDDFKALVY---EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K +Y EFM GSL ++L G+ + + PK ++F +I + Y
Sbjct: 248 ------KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQRNY 299
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
+H D L+ +N+L+ + +ADFGLA+ +G K I + AP
Sbjct: 300 IHRD---------LRAANILVSASLVCKIADFGLAR-----------VGAKFPIKWTAPE 339
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
GS +I DV+S+GILL+E++T R
Sbjct: 340 AINFGS-FTIKSDVWSFGILLMEIVTYGR 367
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 408 IDMGSFGSVYKGIL--DEGKTIIAVKVLNLLHHGASKSSI---AECSALRNIRHKNLVKI 462
I G FG VYKG+L GK + V + L K + E + H N++++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
V S YK ++ E+M NG+L+++L G + LQ + + +A
Sbjct: 112 EGVIS--KYKP---MMIITEYMENGALDKFLREKDGE---------FSVLQLVGMLRGIA 157
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKG 579
+KYL H DL N+L++ + V+DFGL+++L P A TS G K
Sbjct: 158 AGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS--GGKI 212
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + AP S + DV+S+GI++ E+MT +RP
Sbjct: 213 PIRWTAPEAISYRKFTSAS-DVWSFGIVMWEVMTYGERP 250
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 77
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 78 -REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 126
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLA 183
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 184 Y-NKFSIKSDVWAFGVLLWEIAT 205
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 80 -REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 186 Y-NKFSIKSDVWAFGVLLWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 80 -REPPFYIII-EFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 186 Y-NKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 85 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 133
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 134 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 190
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 191 Y-NKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 80 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 186 Y-NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 80 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 128
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 129 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 185
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 186 Y-NKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 77
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 78 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 126
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF-TAHAGAKFPIKWTAPESLA 183
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 184 Y-NKFSIKSDVWAFGVLLWEIAT 205
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 283
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 284 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 332
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H +L N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 333 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 389
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 390 Y-NKFSIKSDVWAFGVLLWEIAT 411
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 325
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + +N + + +A ++ A++YL
Sbjct: 326 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VNAVVLLYMATQISSAMEYLE- 374
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H +L N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 375 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 431
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 432 Y-NKFSIKSDVWAFGVLLWEIAT 453
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ A+V ++ SL LH + ++ I+IA A +
Sbjct: 73 STAPQL------AIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 117
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-- 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 71 ----GYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 117
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 174
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 74 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 127
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP--PAHLQTSSIGV 577
+ +Y+H D L N+L+++E + DFGL K+LP + G
Sbjct: 128 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPG- 177
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 178 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + T +AVK L + ++ + E + ++ ++H LV++ V +
Sbjct: 24 GQFGEVWMGYYN-NSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR-- 79
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ ++ E+M GSL ++L G V PK ++F + +A + Y+
Sbjct: 80 ---EEPIYIITEYMAKGSLLDFLKSDEGG--KVLLPKLIDF------SAQIAEGMAYIE- 127
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +NVL+ + +ADFGLA+++ T+ G K I + AP
Sbjct: 128 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAIN 184
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
G +I DV+S+GILL E++T
Sbjct: 185 FGC-FTIKSDVWSFGILLYEIVT 206
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 78 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGM 131
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 132 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 181
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 182 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 74 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 127
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 128 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 177
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 178 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 73 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGM 126
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 127 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 176
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 177 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-- 75
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 76 ----GYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 123 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-- 72
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 73 ----GYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 119
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 120 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 176
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 177 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 105 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 158
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 159 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 208
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 209 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 74 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 127
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 128 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 177
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 178 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-- 75
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 76 ----GYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 123 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 179
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 180 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 72 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 125
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 126 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 175
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 176 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + + ++ K L + +I +
Sbjct: 77 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHA---ERIDHIKLLQYTSQICKGM 130
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 131 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 180
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 181 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 92 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 145
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 146 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 195
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 196 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 77 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 130
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 131 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 180
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 181 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 92 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 145
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 146 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 195
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 196 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+ G + T +AVK L + ++ + E + ++ ++H LV++ V +
Sbjct: 23 GQFGEVWMGYYN-NSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK-- 78
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ ++ EFM GSL ++L G V PK ++F + +A + Y+
Sbjct: 79 ---EEPIYIITEFMAKGSLLDFLKSDEGG--KVLLPKLIDF------SAQIAEGMAYIE- 126
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL+ +NVL+ + +ADFGLA+++ T+ G K I + AP
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAIN 183
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
G +I +V+S+GILL E++T
Sbjct: 184 FGC-FTIKSNVWSFGILLYEIVT 205
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 79 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 132
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 133 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 182
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 183 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 98
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 99 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 144
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 145 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 201
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 202 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 81 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 134
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 135 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 184
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 185 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 99
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 100 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 145
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + + G+I ++A
Sbjct: 146 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 202
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 80 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 133
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
+ +Y+H D L N+L+++E + DFGL K+LP + + G
Sbjct: 134 EYLGTKRYIHRD---------LATRNILVENENRVKIGDFGLTKVLPQDK-EXXKVKEPG 183
Query: 580 T--IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 184 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 97 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 143
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV 200
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 201 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 116 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 162
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 163 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 219
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 220 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 117 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 163
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 164 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 220
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 221 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 25/209 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG V G D +AVK + + +++ +AE S + +RH NLV++L V
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
V+ KG + +V E+M GSL ++L ++V CL + ++DV A++Y
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRSRG---RSVLGGDCL-----LKFSLDVCEAMEY 132
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
L + H DL NVL+ + A V+DFGL K T + VK T AP
Sbjct: 133 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----AP- 183
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E + S DV+S+GILL E+ + R
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 98 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 144
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 202 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 25/209 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG V G D +AVK + + +++ +AE S + +RH NLV++L V
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
V+ KG + +V E+M GSL ++L ++V CL + ++DV A++Y
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLR---SRGRSVLGGDCL-----LKFSLDVCEAMEY 117
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
L + H DL NVL+ + A V+DFGL K T + VK T AP
Sbjct: 118 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----AP- 168
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E + S DV+S+GILL E+ + R
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 25/209 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG V G D +AVK + + +++ +AE S + +RH NLV++L V
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
V+ KG + +V E+M GSL ++L ++V CL + ++DV A++Y
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRSRG---RSVLGGDCL-----LKFSLDVCEAMEY 123
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
L + H DL NVL+ + A V+DFGL K T + VK T AP
Sbjct: 124 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----AP- 174
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E + S DV+S+GILL E+ + R
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+K L +AVK+ L S S E + ++H+NL++ + +
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPL-QDKQSWQSEREIFSTPGMKHENLLQFIAA----E 78
Query: 471 YKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
+G + + L+ F GSL ++L + + + ++A ++ L Y
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL-----------KGNIITWNELCHVAETMSRGLSY 127
Query: 528 LHHDC--------QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
LH D +P+ AH D K NVLL ++TA +ADFGLA P + G G
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVG 187
Query: 580 TIGYIAP----AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
T Y+AP + + D+Y+ G++L EL++R + +D
Sbjct: 188 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 26/251 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 90 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 136
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 137 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 193
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP--SDI-MFEGNMNLHNFARTVLPD 638
++A E + + DV+S+G+LL ELMTR P D+ F+ + L R + P+
Sbjct: 194 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPE 252
Query: 639 HVMDIVDSTLL 649
+ D + +L
Sbjct: 253 YCPDPLYEVML 263
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 96 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 142
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 143 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 199
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 200 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 97 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 143
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 144 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 200
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 201 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 95 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 141
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 142 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 198
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 199 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM-- 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 71 ----GYSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 117
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + G+I ++A
Sbjct: 118 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 174
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 404 FLCWIDMGSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
FL + G+FGSV Y + D ++AVK L + E L++++H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
VK VC G L+ E++ GSL ++L + ++ K L + +I +
Sbjct: 75 VKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGM 128
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP--PAHLQTSSIGV 577
+ +Y+H + L N+L+++E + DFGL K+LP + + G
Sbjct: 129 EYLGTKRYIHRN---------LATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG- 178
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ I + AP E S+ S+ DV+S+G++L EL T
Sbjct: 179 ESPIFWYAP-ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 98
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ +V E+M G+L ++L + + T + + +A ++ A++YL
Sbjct: 99 --LEPPFYIVTEYMPYGNLLDYLRECNREEVTA--------VVLLYMATQISSAMEYLE- 147
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H DL N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 148 --KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 204
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
+ SI DV+++G+LL E+ T
Sbjct: 205 YNT-FSIKSDVWAFGVLLWEIAT 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 98 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 144
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 145 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 201
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 202 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 93 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+KYL H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 140 GMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 197 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 157 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 203
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 204 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 261 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G +G VY+G+ + +AVK L + + E + ++ I+H NLV++L VC+
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT--- 286
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ F ++ EFM G+L ++L + + ++ + + +A ++ A++YL
Sbjct: 287 -REPPF-YIITEFMTYGNLLDYLRECNRQE--------VSAVVLLYMATQISSAMEYLE- 335
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
+ H +L N L+ VADFGL++L+ T+ G K I + AP
Sbjct: 336 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLA 392
Query: 591 LGSEVSINGDVYSYGILLLELMT 613
++ SI DV+++G+LL E+ T
Sbjct: 393 Y-NKFSIKSDVWAFGVLLWEIAT 414
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 92 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 137
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + G+I ++A
Sbjct: 138 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 194
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 195 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 98 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 144
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 202 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 99 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 145
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 202
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 203 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 96 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 142
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 143 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 200 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 98 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 144
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 145 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 202 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 99 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 145
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 146 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 203 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 408 IDMGSFGSVYKGIL--DEGKTI-IAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKIL 463
I G FG VY G L ++GK I AVK LN + G + E +++ H N++ +L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+C + + +V +M +G L ++ P + I + VA
Sbjct: 103 GIC----LRSEGSPLVVLPYMKHGDLRNFIR------NETHNPTVKDL---IGFGLQVAK 149
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT--SSIGVKGTI 581
+K+L H DL N +LD + T VADFGLA+ + + + G K +
Sbjct: 150 GMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 206
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
++A E + + DV+S+G+LL ELMTR P
Sbjct: 207 KWMA-LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 99
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH + ++ I+IA A +
Sbjct: 100 -----YSTKPQLAIVTQWCEGSSLYHHLHIIETK---------FEMIKLIDIARQTAQGM 145
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L ++T + DFGLA + G+I ++A
Sbjct: 146 DYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 202
Query: 586 PAEYGLGSE--VSINGDVYSYGILLLELMTRKRP 617
P + + S DVY++GI+L ELMT + P
Sbjct: 203 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 25/209 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG V G D +AVK + + +++ +AE S + +RH NLV++L V
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
V+ KG + +V E+M GSL ++L ++V CL + ++DV A++Y
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLR---SRGRSVLGGDCL-----LKFSLDVCEAMEY 304
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
L + H DL NVL+ + A V+DFGL K T + VK T AP
Sbjct: 305 LEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTGKLPVKWT----AP- 355
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKR 616
E + S DV+S+GILL E+ + R
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 41/272 (15%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 75
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH ++ E K I+IA A +
Sbjct: 76 -----YSTKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKL------IDIARQTARGM 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L + T + DFGLA + + G+I ++A
Sbjct: 122 DYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 586 PAEYGL--GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
P + + S DVY++GI+L ELMT + P N++N D ++++
Sbjct: 179 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS-------NINN------RDQIIEM 225
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECL 675
V L+ D + SN +R R+ + ECL
Sbjct: 226 VGRGSLSPDLS-KVRSNCPKRMKRL--MAECL 254
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKGI + EG+T+ +A+K+LN A+ + E + ++ H +LV++L V
Sbjct: 26 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + LV + M +G L E++H E + +N + +A +
Sbjct: 86 CLSPTIQ------LVTQLMPHGCLLEYVH---------EHKDNIGSQLLLNWCVQIAKGM 130
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL + H DL NVL+ + DFGLA+LL + ++ G K I ++A
Sbjct: 131 MYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E + + DV+SYG+ + ELMT
Sbjct: 188 -LECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKGI + EG+T+ +A+K+LN A+ + E + ++ H +LV++L V
Sbjct: 49 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGV 108
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + LV + M +G L E++H E + +N + +A +
Sbjct: 109 CLSPTIQ------LVTQLMPHGCLLEYVH---------EHKDNIGSQLLLNWCVQIAKGM 153
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL + H DL NVL+ + DFGLA+LL + ++ G K I ++A
Sbjct: 154 MYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E + + DV+SYG+ + ELMT
Sbjct: 211 -LECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTIIAVKVLNLLHHGASKSSIAECS----ALRNIRHKNLVKILTV 465
G FG+V+KG+ + EG++I + ++ + + S + A+ ++ H ++V++L +
Sbjct: 42 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL 101
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C G + LV +++ GSL + + GA P+ L +N + +A +
Sbjct: 102 CPGSSLQ------LVTQYLPLGSLLDHVRQHRGA----LGPQLL-----LNWGVQIAKGM 146
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL + H +L NVLL VADFG+A LLPP Q K I ++A
Sbjct: 147 YYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
G + + DV+SYG+ + ELMT
Sbjct: 204 LESIHFG-KYTHQSDVWSYGVTVWELMT 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 41/272 (15%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ A+V ++ SL LH ++ E K I+IA A +
Sbjct: 89 STAPQL------AIVTQWCEGSSLYHHLH---ASETKFEMKKL------IDIARQTARGM 133
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L + T + DFGLA + G+I ++A
Sbjct: 134 DYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 586 PAEYGL--GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
P + + S DVY++GI+L ELMT + P N++N D ++++
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS-------NINN------RDQIIEM 237
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECL 675
V L+ D + SN +R R+ + ECL
Sbjct: 238 VGRGSLSPDLS-KVRSNCPKRMKRL--MAECL 266
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTIIAVKVLNLLHHGASKSSIAECS----ALRNIRHKNLVKILTV 465
G FG+V+KG+ + EG++I + ++ + + S + A+ ++ H ++V++L +
Sbjct: 24 GVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL 83
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C G + LV +++ GSL + + GA P+ L +N + +A +
Sbjct: 84 CPGSSLQ------LVTQYLPLGSLLDHVRQHRGA----LGPQLL-----LNWGVQIAKGM 128
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL + H +L NVLL VADFG+A LLPP Q K I ++A
Sbjct: 129 YYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
G + + DV+SYG+ + ELMT
Sbjct: 186 LESIHFG-KYTHQSDVWSYGVTVWELMT 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 41/272 (15%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
I GSFG+VYKG + +AVK+LN+ + + E LR RH N++ +
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
Y A+V ++ SL LH ++ E K I+IA A +
Sbjct: 88 -----YSTKPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKL------IDIARQTARGM 133
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK +N+ L + T + DFGLA + G+I ++A
Sbjct: 134 DYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 586 PAEYGL--GSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
P + + S DVY++GI+L ELMT + P N++N D ++++
Sbjct: 191 PEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS-------NINN------RDQIIEM 237
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECL 675
V L+ D + SN +R R+ + ECL
Sbjct: 238 VGRGSLSPDLS-KVRSNCPKRMKRL--MAECL 266
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 15/210 (7%)
Query: 411 GSFGSVYKGIL--DEGKTI-IAVKVLNLLHHGASK--SSIAECSALRNIRHKNLVKILTV 465
G FGSV +G L ++G ++ +AVK + L + + ++E + +++ H N++++L V
Sbjct: 45 GEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV 104
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + +G ++ FM G L +L + PK + + +D+A +
Sbjct: 105 CIEMSSQGIPKPMVILPFMKYGDLHTYLL----YSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
+YL + H DL N +L +MT VADFGL+K + K + +IA
Sbjct: 161 EYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 586 PAEYGLGSEV-SINGDVYSYGILLLELMTR 614
L V + DV+++G+ + E+ TR
Sbjct: 218 IE--SLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 411 GSFGSVYKGIL--DEGKTI-IAVKVL--NLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G FGSV + L ++G + +AVK+L +++ + + E + ++ H ++ K++ V
Sbjct: 34 GEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGV 93
Query: 466 CSGVDYKGD-DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
KG ++ FM +G L H A + E P L + +D+AC
Sbjct: 94 SLRSRAKGRLPIPMVILPFMKHGDL----HAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYI 584
++YL H DL N +L +MT VADFGL++ + K + ++
Sbjct: 150 MEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL 206
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIV 644
A E + +++ DV+++G+ + E+MTR + E N ++N+
Sbjct: 207 A-LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-NAEIYNY------------- 251
Query: 645 DSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHELQ 704
I N R+ EC+ V + C P+ R + T + EL+
Sbjct: 252 -----------LIGGN------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294
Query: 705 SI 706
+I
Sbjct: 295 NI 296
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 27/214 (12%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
I G FG V +G L + ++ +A+K L + + ++E S + H N++++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 464 TVCSGVDYKGDDFKALVY-EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
V + + ++ EFM NG+L+ +L G +Q + + +A
Sbjct: 84 GVVT------NSMPVMILTEFMENGALDSFLRLNDGQ---------FTVIQLVGMLRGIA 128
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAH---LQTSSIGVKG 579
++YL + + H DL N+L++ + V+DFGL++ L +TSS+G K
Sbjct: 129 SGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP S + D +SYGI++ E+M+
Sbjct: 186 PIRWTAPEAIAFRKFTSAS-DAWSYGIVMWEVMS 218
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G+FG V K +A+K + K+ I E L + H N+VK+ C
Sbjct: 17 VGRGAFGVVCKAKWRAKD--VAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
+ LV E+ GSL LH GA E ++ + + + Y
Sbjct: 73 -------NPVCLVMEYAEGGSLYNVLH---GA----EPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
LH H DLKP N+LL T + DFG A +QT KG+ ++AP
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP 173
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM----FEGNMNLHNFARTVLPDHVMD 642
E GS S DV+S+GI+L E++TR++P D + F +HN R L ++
Sbjct: 174 -EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK 232
Query: 643 IVDSTLLADDEDLTITSNQRQRQARINNIMECLI 676
++S + + +QR I IM L+
Sbjct: 233 PIESLMT---RCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 34/224 (15%)
Query: 411 GSFGSVYKG-ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G FG V+K +L+E +AVK+ + S + E +L ++H+N+++ + G
Sbjct: 35 GRFGCVWKAQLLNE---YVAVKIFPI-QDKQSWQNEYEVYSLPGMKHENILQFI----GA 86
Query: 470 DYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ +G L+ F GSL ++L +++ + +IA +A L
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL-----------KANVVSWNELCHIAETMARGLA 135
Query: 527 YLHHDC-------QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
YLH D +P +H D+K NVLL + +TA +ADFGLA + G G
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 580 TIGYIAP----AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
T Y+AP + + D+Y+ G++L EL +R +D
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
+ G+FG V K +A+K + K+ I E L + H N+VK+ C
Sbjct: 16 VGRGAFGVVCKAKWRAKD--VAIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
+ LV E+ GSL LH GA E ++ + + + Y
Sbjct: 72 -------NPVCLVMEYAEGGSLYNVLH---GA----EPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
LH H DLKP N+LL T + DFG A +QT KG+ ++AP
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAP 172
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM----FEGNMNLHNFARTVLPDHVMD 642
E GS S DV+S+GI+L E++TR++P D + F +HN R L ++
Sbjct: 173 -EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK 231
Query: 643 IVDSTLLADDEDLTITSNQRQRQARINNIMECLI 676
++S + + +QR I IM L+
Sbjct: 232 PIESLMT---RCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRN--IRHKNLVKILTV 465
I G +G+VYKG LDE +AVKV + + ++ I E + R + H N+ + +
Sbjct: 21 IGRGRYGAVYKGSLDERP--VAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
V G LV E+ NGSL ++L + +++ +A V L
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL-----------SLHTSDWVSSCRLAHSVTRGL 124
Query: 526 KYLHHDC------QPTTAHCDLKPSNVLLDHEMTAHVADFGLA------KLLPPAHLQTS 573
YLH + +P +H DL NVL+ ++ T ++DFGL+ +L+ P +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSING--------DVYSYGILLLELMTR 614
+I GTI Y+AP L V++ D+Y+ G++ E+ R
Sbjct: 185 AISEVGTIRYMAPE--VLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
I G FG V +G L + ++ +A+K L + + ++E S + H N++++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 464 TVCSGVDYKGDDFKALVY-EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
V + + ++ EFM NG+L+ +L G +Q + + +A
Sbjct: 82 GVVT------NSMPVMILTEFMENGALDSFLRLNDGQ---------FTVIQLVGMLRGIA 126
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-----PAHLQTSSIGV 577
++YL + + H DL N+L++ + V+DFGL++ L P + TSS+G
Sbjct: 127 SGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY--TSSLGG 181
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
K I + AP S + D +SYGI++ E+M+
Sbjct: 182 KIPIRWTAPEAIAFRKFTSAS-DAWSYGIVMWEVMS 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR---HKNLVKI 462
I +G++G+VYK +A+K + + G S++ E + LR + H N+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCL--NFLQRINIAID 520
+ VC+ + LV+E + + L +L E K L FL+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR------- 123
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
L +LH +C H DLKP N+L+ T +ADFGLA++ Q + V T
Sbjct: 124 ---GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVT 174
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
+ Y AP E L S + D++S G + E+ RK
Sbjct: 175 LWYRAP-EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR---HKNLVKI 462
I +G++G+VYK +A+K + + G S++ E + LR + H N+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCL--NFLQRINIAID 520
+ VC+ + LV+E + + L +L E K L FL+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR------- 123
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
L +LH +C H DLKP N+L+ T +ADFGLA++ Q + V T
Sbjct: 124 ---GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVT 174
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
+ Y AP E L S + D++S G + E+ RK
Sbjct: 175 LWYRAP-EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G++G VYK +G+ I+A+K + L G ++I E S L+ + H N+V ++ V
Sbjct: 32 GTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ LV+EFM E+ L V +KT LQ I I + L+ +
Sbjct: 91 -----ERCLTLVFEFM-----EKDLKKVLDENKTG--------LQDSQIKIYLYQLLRGV 132
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYIAPA 587
H Q H DLKP N+L++ + +ADFGLA+ P T + T+ Y AP
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPD 189
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRK 615
+ S + D++S G + E++T K
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G++G VYK +G+ I+A+K + L G ++I E S L+ + H N+V ++ V
Sbjct: 32 GTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ LV+EFM E+ L V +KT LQ I I + L+ +
Sbjct: 91 -----ERCLTLVFEFM-----EKDLKKVLDENKTG--------LQDSQIKIYLYQLLRGV 132
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYIAPA 587
H Q H DLKP N+L++ + +ADFGLA+ P T + T+ Y AP
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV---VTLWYRAPD 189
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRK 615
+ S + D++S G + E++T K
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 25/215 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR---HKNLVKI 462
I +G++G+VYK +A+K + + G S++ E + LR + H N+V++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCL--NFLQRINIAID 520
+ VC+ + LV+E + + L +L E K L FL+
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR------- 123
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
L +LH +C H DLKP N+L+ T +ADFGLA++ Q + V T
Sbjct: 124 ---GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVT 174
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
+ Y AP E L S + D++S G + E+ RK
Sbjct: 175 LWYRAP-EVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTV 465
G FG V Y D +AVK L G + + E LRN+ H+N+VK +
Sbjct: 20 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGI 79
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C+ G + L+ EF+ +GSL+E+L +N Q++ A+ + +
Sbjct: 80 CTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---------INLKQQLKYAVQICKGM 127
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
YL H DL NVL++ E + DFGL K + T + +
Sbjct: 128 DYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 184
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMT 613
AP E + S+ I DV+S+G+ L EL+T
Sbjct: 185 AP-ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTV 465
G FG V Y D +AVK L G + + E LRN+ H+N+VK +
Sbjct: 32 GHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGI 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C+ G + L+ EF+ +GSL+E+L +N Q++ A+ + +
Sbjct: 92 CTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---------INLKQQLKYAVQICKGM 139
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
YL H DL NVL++ E + DFGL K + T + +
Sbjct: 140 DYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 196
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMT 613
AP E + S+ I DV+S+G+ L EL+T
Sbjct: 197 AP-ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLH-HGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V G L + + +A+K L + + ++E S + H N++ +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL- 99
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K ++ EFM NGSL+ +L G +Q + + +A
Sbjct: 100 ---EGVVTKSTPV-MIITEFMENGSLDSFLRQNDGQ---------FTVIQLVGMLRGIAA 146
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-----PAHLQTSSIGVK 578
+KYL H DL N+L++ + V+DFGL++ L P + TS++G K
Sbjct: 147 GMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TSALGGK 201
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + AP S + DV+SYGI++ E+M+ +RP
Sbjct: 202 IPIRWTAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERP 240
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVK-- 461
I +G FG V G L + + +A+K L + + ++E S + H N++
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 462 -ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID 520
++T C V ++ E+M NGSL+ +L G +Q + +
Sbjct: 97 GVVTKCKPV--------MIITEYMENGSLDAFLRKNDGR---------FTVIQLVGMLRG 139
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGV 577
+ +KYL + H DL N+L++ + V+DFG++++L P A T G
Sbjct: 140 IGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GG 194
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
K I + AP S + DV+SYGI++ E+M+ +RP
Sbjct: 195 KIPIRWTAPEAIAYRKFTSAS-DVWSYGIVMWEVMSYGERP 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKN 458
F F L I GSFG V ++ K + A+K +N K E + +RN+
Sbjct: 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-------KQKCVERNEVRNV---- 62
Query: 459 LVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR-INI 517
K L + G+++ L Y F + + + G D + ++F + + +
Sbjct: 63 -FKELQIMQGLEHPF--LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 518 AI-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
I ++ AL YL + H D+KP N+LLD H+ DF +A +LP +T
Sbjct: 120 FICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITT 173
Query: 577 VKGTIGYIAPAEYG--LGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN--LHNFA 632
+ GT Y+AP + G+ S D +S G+ EL+ +RP I + +H F
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE 233
Query: 633 RTVL 636
TV+
Sbjct: 234 TTVV 237
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIA-ECSALRNIRHKNLVKILTVCS 467
GSFG V +A+K++N +L + I E S LR +RH +++K+ V
Sbjct: 24 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI- 82
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K D +V E+ N E + DK E + F Q+I A++Y
Sbjct: 83 ----KSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQ-EARRFFQQI------ISAVEY 127
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
H + H DLKP N+LLD + +ADFGL+ ++ + +S G+ Y AP
Sbjct: 128 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 181
Query: 587 ---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ G EV DV+S G++L ++ R+ P D
Sbjct: 182 VISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 19/212 (8%)
Query: 411 GSFGSV-----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG V Y ++ K ++AVK L A K E L N++H+++VK V
Sbjct: 24 GAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGV 83
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA----PKCLNFLQRINIAIDV 521
C +GD +V+E+M +G L ++L G D + A P L Q ++IA +
Sbjct: 84 CV----EGDPL-IMVFEYMKHGDLNKFLR-AHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A + YL H DL N L+ + + DFG+++ + I
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
++ P E + + + DV+S G++L E+ T
Sbjct: 195 RWM-PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIA-ECSALRNIRHKNLVKILTVCS 467
GSFG V +A+K++N +L + I E S LR +RH +++K+ V
Sbjct: 25 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI- 83
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K D +V E+ N E + DK E + F Q+I A++Y
Sbjct: 84 ----KSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQ-EARRFFQQI------ISAVEY 128
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
H + H DLKP N+LLD + +ADFGL+ ++ + +S G+ Y AP
Sbjct: 129 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 182
Query: 587 ---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ G EV DV+S G++L ++ R+ P D
Sbjct: 183 VISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIA-ECSALRNIRHKNLVKILTVCS 467
GSFG V +A+K++N +L + I E S LR +RH +++K+ V
Sbjct: 15 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI- 73
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K D +V E+ N E + DK E + F Q+I A++Y
Sbjct: 74 ----KSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQ-EARRFFQQI------ISAVEY 118
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
H + H DLKP N+LLD + +ADFGL+ ++ + +S G+ Y AP
Sbjct: 119 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 172
Query: 587 ---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ G EV DV+S G++L ++ R+ P D
Sbjct: 173 VISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIA-ECSALRNIRHKNLVKILTVCS 467
GSFG V +A+K++N +L + I E S LR +RH +++K+ V
Sbjct: 19 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI- 77
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
K D +V E+ N E + DK E + F Q+I A++Y
Sbjct: 78 ----KSKDEIIMVIEYAGN----ELFDYIVQRDKMSEQ-EARRFFQQI------ISAVEY 122
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
H + H DLKP N+LLD + +ADFGL+ ++ + +S G+ Y AP
Sbjct: 123 CH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 176
Query: 587 ---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ G EV DV+S G++L ++ R+ P D
Sbjct: 177 VISGKLYAGPEV----DVWSCGVILYVMLCRRLPFD 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVK-- 461
I +G FG V G L + + +A+K L + + ++E S + H N++
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 462 -ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID 520
++T C V ++ E+M NGSL+ +L G +Q + +
Sbjct: 82 GVVTKCKPV--------MIITEYMENGSLDAFLRKNDGR---------FTVIQLVGMLRG 124
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGV 577
+ +KYL + H DL N+L++ + V+DFG++++L P A T G
Sbjct: 125 IGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GG 179
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
K I + AP S + DV+SYGI++ E+M+ +RP
Sbjct: 180 KIPIRWTAPEAIAYRKFTSAS-DVWSYGIVMWEVMSYGERP 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVK-- 461
I +G FG V G L + + +A+K L + + ++E S + H N++
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 462 -ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID 520
++T C V ++ E+M NGSL+ +L G +Q + +
Sbjct: 76 GVVTKCKPV--------MIITEYMENGSLDAFLRKNDGR---------FTVIQLVGMLRG 118
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGV 577
+ +KYL + H DL N+L++ + V+DFG++++L P A T G
Sbjct: 119 IGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GG 173
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
K I + AP S + DV+SYGI++ E+M+ +RP
Sbjct: 174 KIPIRWTAPEAIAYRKFTSAS-DVWSYGIVMWEVMSYGERP 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 60/303 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTV 465
I G FG V+ G K +A+K + GA + I E + + H LV++ V
Sbjct: 18 IGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--ADKTVEAPKCLNFLQRINIAIDVAC 523
C LV+EFM +G L ++L G A +T+ + + +DV
Sbjct: 74 C-----LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----------LGMCLDVCE 117
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
+ YL C H DL N L+ V+DFG+ + + TSS G K + +
Sbjct: 118 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKW 173
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
+P + S S DV+S+G+L+ E+ + EG + N +
Sbjct: 174 ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRS----------- 212
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703
+S ++ D I++ R + R+ + V +I C E P+DR + ++ +L
Sbjct: 213 -NSEVVED-----ISTGFRLYKPRLAS-----THVYQIMNHCWRERPEDRPAFSRLLRQL 261
Query: 704 QSI 706
I
Sbjct: 262 AEI 264
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 109/272 (40%), Gaps = 59/272 (21%)
Query: 408 IDMGSFGSVYKGILD-EGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G FG V+K +GKT + +V ++ + E AL + H N+V
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV-----KYNNEKAEREVKALAKLDHVNIVHYNGCW 74
Query: 467 SGVDYK----GDDFKALVY--------------------EFMHNGSLEEWLHPVSGA--D 500
G DY D ++ Y EF G+LE+W+ G D
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 501 KTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560
K + L ++I +D + K +H D LKPSN+ L + DFG
Sbjct: 135 KVL----ALELFEQITKGVDYIHSKKLIHRD---------LKPSNIFLVDTKQVKIGDFG 181
Query: 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAE---YGLGSEVSINGDVYSYGILLLELMTRKRP 617
L L +T S KGT+ Y++P + G EV D+Y+ G++L EL+
Sbjct: 182 LVTSLKNDGKRTRS---KGTLRYMSPEQISSQDYGKEV----DLYALGLILAELL---HV 231
Query: 618 SDIMFEGNMNLHNFARTVLPDHVMDIVDSTLL 649
D FE + + ++ D + D + TLL
Sbjct: 232 CDTAFETSKFFTDLRDGIISD-IFDKKEKTLL 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 60/303 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTV 465
I G FG V+ G K +A+K + GA + I E + + H LV++ V
Sbjct: 13 IGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--ADKTVEAPKCLNFLQRINIAIDVAC 523
C LV+EFM +G L ++L G A +T+ + + +DV
Sbjct: 69 C-----LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----------LGMCLDVCE 112
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
+ YL C H DL N L+ V+DFG+ + + TSS G K + +
Sbjct: 113 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKW 168
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
+P + S S DV+S+G+L+ E+ + EG + N +
Sbjct: 169 ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRS----------- 207
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703
+S ++ D I++ R + R+ + V +I C E P+DR + ++ +L
Sbjct: 208 -NSEVVED-----ISTGFRLYKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQL 256
Query: 704 QSI 706
I
Sbjct: 257 AEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 60/303 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTV 465
I G FG V+ G K +A+K + GA + I E + + H LV++ V
Sbjct: 15 IGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--ADKTVEAPKCLNFLQRINIAIDVAC 523
C LV+EFM +G L ++L G A +T+ + + +DV
Sbjct: 71 C-----LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----------LGMCLDVCE 114
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
+ YL C H DL N L+ V+DFG+ + + TSS G K + +
Sbjct: 115 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKW 170
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
+P + S S DV+S+G+L+ E+ + EG + N +
Sbjct: 171 ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRS----------- 209
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703
+S ++ D I++ R + R+ + V +I C E P+DR + ++ +L
Sbjct: 210 -NSEVVED-----ISTGFRLYKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQL 258
Query: 704 QSI 706
I
Sbjct: 259 AEI 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASK-----SSIAECSALRNIR---HKNL 459
I +G++G+VYK +A+K + + + G S++ E + LR + H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCL--NFLQRINI 517
V+++ VC+ + LV+E + + L +L E K L FL+
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLR---- 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH +C H DLKP N+L+ T +ADFGLA++ Q + V
Sbjct: 132 ------GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPV 179
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
T+ Y AP E L S + D++S G + E+ RK
Sbjct: 180 VVTLWYRAP-EVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 19/212 (8%)
Query: 411 GSFGSVYKGI-LDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G FG V + I D G+ + + L + E ++ + H N+V V G+
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 84
Query: 470 DYKG-DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+D L E+ G L ++L+ E P + D++ AL+YL
Sbjct: 85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-------RTLLSDISSALRYL 137
Query: 529 HHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
H + H DLKP N++L + + D G AK L L T + GT+ Y+A
Sbjct: 138 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLA 191
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E + ++ D +S+G L E +T RP
Sbjct: 192 P-ELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 19/212 (8%)
Query: 411 GSFGSVYKGI-LDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G FG V + I D G+ + + L + E ++ + H N+V V G+
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL 85
Query: 470 DYKG-DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+D L E+ G L ++L+ E P + D++ AL+YL
Sbjct: 86 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-------RTLLSDISSALRYL 138
Query: 529 HHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
H + H DLKP N++L + + D G AK L L T + GT+ Y+A
Sbjct: 139 HEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV---GTLQYLA 192
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E + ++ D +S+G L E +T RP
Sbjct: 193 P-ELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H+N+V ++ V + DD LV E++ +L E+ +E+ L+ I
Sbjct: 70 HQNIVSMIDVD-----EEDDCYYLVMEYIEGPTLSEY----------IESHGPLSVDTAI 114
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
N + +K+ H H D+KP N+L+D T + DFG+AK L L T +
Sbjct: 115 NFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTN 170
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
V GT+ Y +P E G D+YS GI+L E++ + P
Sbjct: 171 HVLGTVQYFSP-EQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 28 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 84 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 129
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + +TSS+G K +
Sbjct: 130 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-ETSSVGSKFPV 185
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 186 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 234
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 60/305 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTV 465
I G FG V+ G K +A+K + GA + I E + + H LV++ V
Sbjct: 15 IGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--ADKTVEAPKCLNFLQRINIAIDVAC 523
C LV+EFM +G L ++L G A +T+ + + +DV
Sbjct: 71 C-----LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----------LGMCLDVCE 114
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
+ YL + + H DL N L+ V+DFG+ + + TSS G K + +
Sbjct: 115 GMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKW 170
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
+P + S S DV+S+G+L+ E+ + EG + N +
Sbjct: 171 ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRS----------- 209
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703
+S ++ D I++ R + R+ + V +I C E P+DR + ++ +L
Sbjct: 210 -NSEVVED-----ISTGFRLYKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQL 258
Query: 704 QSIKS 708
+I +
Sbjct: 259 AAIAA 263
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 78 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 130 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 177
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 178 AP-EILLGXKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 640 VM 641
V+
Sbjct: 233 VV 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 26/217 (11%)
Query: 408 IDMGSFGSVYKGILD-EGKTIIAVKVLNL---LHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V G L GK +AV + L + + E S + H N+V +
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL- 109
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV +G +V EFM NG+L+ +L G +Q + + +A
Sbjct: 110 ---EGVVTRGKPV-MIVIEFMENGALDAFLRKHDGQ---------FTVIQLVGMLRGIAA 156
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP--PAHLQTSSIGVKGTI 581
++YL H DL N+L++ + V+DFGL++++ P + T++ G K +
Sbjct: 157 GMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT-GGKIPV 212
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
+ AP S + DV+SYGI++ E+M+ +RP
Sbjct: 213 RWTAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERP 248
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 49/246 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-------ECSALRNIRHKNLV 460
I G FG V+KG L + K+++A+K L L I E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 461 KILTVCSGVDYKGDDFKALVYEFMHNGSLEEWL----HPVSGADKTVEAPKCLNFLQRIN 516
K+ + + +V EF+ G L L HP+ + K +
Sbjct: 87 KLYGLMH-------NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK-------------LR 126
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLL-----DHEMTAHVADFGLAKLLPPAHLQ 571
+ +D+A ++Y+ + P H DL+ N+ L + + A VADFGL+ Q
Sbjct: 127 LMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--------Q 177
Query: 572 TSSIGVKGTIG---YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S V G +G ++AP G E + D YS+ ++L ++T + P D G +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 628 LHNFAR 633
N R
Sbjct: 238 FINMIR 243
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKV-LNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G++G VYK + G+T K+ L G ++I E S L+ ++H N+VK+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 467 SGVDYKGDDFKALVYEFMH-NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
K LV F H + L++ L G ++V A L LQ +N +
Sbjct: 70 HTK-------KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--LQLLN-------GI 113
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
Y H H DLKP N+L++ E +ADFGLA+ P T I T+ Y
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI---VTLWYR 167
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELM 612
AP + S D++S G + E++
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGXKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 78 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 130 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 177
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 178 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 640 VM 641
V+
Sbjct: 233 VV 234
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 30/216 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG K E ++ +K L ++ + E +R + H N++K + GV
Sbjct: 21 GCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI----GVL 76
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
YK D + E++ G+L G K++++ + QR++ A D+A + YLH
Sbjct: 77 YK-DKRLNFITEYIKGGTLR-------GIIKSMDSQ--YPWSQRVSFAKDIASGMAYLH- 125
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG------------VK 578
H DL N L+ VADFGLA+L+ Q + V
Sbjct: 126 --SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR 614
G ++AP E G DV+S+GI+L E++ R
Sbjct: 184 GNPYWMAP-EMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 70 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 122 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 169
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 170 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 640 VM 641
V+
Sbjct: 225 VV 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 408 IDMGSFGSVYKG--ILDEGKTIIAVKVLNLLHHGASKSSIA----ECSALRNIRHKNLVK 461
I +G FG VY+ I DE +AVK +I E ++H N++
Sbjct: 15 IGIGGFGKVYRAFWIGDE----VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC K + LV EF G L L + K + P L +N A+ +
Sbjct: 71 LRGVC----LKEPNL-CLVMEFARGGPLNRVL-----SGKRI-PPDIL-----VNWAVQI 114
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT--------AHVADFGLAKLLPPAHLQTS 573
A + YLH + H DLK SN+L+ ++ + DFGLA+ +T+
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTT 170
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ G ++AP E S S DV+SYG+LL EL+T + P
Sbjct: 171 KMSAAGAYAWMAP-EVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGLA++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 72 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 124 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 171
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 172 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 640 VM 641
V+
Sbjct: 227 VV 228
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 123/303 (40%), Gaps = 60/303 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVKILTV 465
I G FG V+ G K +A+K + G+ I E + + H LV++ V
Sbjct: 35 IGSGQFGLVHLGYW-LNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--ADKTVEAPKCLNFLQRINIAIDVAC 523
C LV+EFM +G L ++L G A +T+ + + +DV
Sbjct: 91 C-----LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL-----------LGMCLDVCE 134
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
+ YL C H DL N L+ V+DFG+ + + TSS G K + +
Sbjct: 135 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKW 190
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
+P + S S DV+S+G+L+ E+ + EG + N +
Sbjct: 191 ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRS----------- 229
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703
+S ++ D I++ R + R+ + V +I C E P+DR + ++ +L
Sbjct: 230 -NSEVVED-----ISTGFRLYKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQL 278
Query: 704 QSI 706
I
Sbjct: 279 AEI 281
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 8 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 64 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 109
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + TSS+G K +
Sbjct: 110 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPV 165
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 166 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 214
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 70 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 122 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 169
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 170 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 640 VM 641
V+
Sbjct: 225 VV 226
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 408 IDMGSFGSVYKGI-LDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR---HKNLVK 461
I G++G V+K L G +A+K + + G S+I E + LR++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + LV+E + + L +L V E K + F +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF--------QL 129
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
L +LH H DLKP N+L+ +ADFGLA++ Q + V T+
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
Y AP E L S + D++S G + E M R++P +F G+ ++ +
Sbjct: 184 WYRAP-EVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LFRGSSDVDQLGK 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
I G FG V G L + + +A+K L + + ++E S + H N++ +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL- 73
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K ++ EFM NGSL+ +L G +Q + + +A
Sbjct: 74 ---EGVVTKSTPV-MIITEFMENGSLDSFLRQNDGQ---------FTVIQLVGMLRGIAA 120
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-----PAHLQTSSIGVK 578
+KYL H L N+L++ + V+DFGL++ L P + TS++G K
Sbjct: 121 GMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY--TSALGGK 175
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + AP S + DV+SYGI++ E+M+ +RP
Sbjct: 176 IPIRWTAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYGERP 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 408 IDMGSFGSVYKGI-LDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR---HKNLVK 461
I G++G V+K L G +A+K + + G S+I E + LR++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + LV+E + + L +L V E K + F +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF--------QL 129
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
L +LH H DLKP N+L+ +ADFGLA++ Q + V T+
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
Y AP E L S + D++S G + E M R++P +F G+ ++ +
Sbjct: 184 WYRAP-EVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LFRGSSDVDQLGK 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 26/232 (11%)
Query: 408 IDMGSFGSVYKGI-LDEGKTIIAVKVLNLL--HHGASKSSIAECSALRNIR---HKNLVK 461
I G++G V+K L G +A+K + + G S+I E + LR++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + LV+E + + L +L V E K + F +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF--------QL 129
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
L +LH H DLKP N+L+ +ADFGLA++ Q + V T+
Sbjct: 130 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTL 183
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
Y AP E L S + D++S G + E M R++P +F G+ ++ +
Sbjct: 184 WYRAP-EVLLQSSYATPVDLWSVGCIFAE-MFRRKP---LFRGSSDVDQLGK 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 60/303 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTV 465
I G FG V+ G K +A+K + GA + I E + + H LV++ V
Sbjct: 16 IGSGQFGLVHLGYW-LNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--ADKTVEAPKCLNFLQRINIAIDVAC 523
C LV EFM +G L ++L G A +T+ + + +DV
Sbjct: 72 C-----LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL-----------LGMCLDVCE 115
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
+ YL C H DL N L+ V+DFG+ + + TSS G K + +
Sbjct: 116 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSSTGTKFPVKW 171
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDI 643
+P + S S DV+S+G+L+ E+ + EG + N +
Sbjct: 172 ASPEVFSF-SRYSSKSDVWSFGVLMWEVFS---------EGKIPYENRS----------- 210
Query: 644 VDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVHEL 703
+S ++ D I++ R + R+ + V +I C E P+DR + ++ +L
Sbjct: 211 -NSEVVED-----ISTGFRLYKPRLAS-----THVYQIMNHCWRERPEDRPAFSRLLRQL 259
Query: 704 QSI 706
I
Sbjct: 260 AEI 262
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 29/230 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 75 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 127 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 174
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
AP E LG + S D++S G + E++TR+ +F G+ + R
Sbjct: 175 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFR 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 107/259 (41%), Gaps = 46/259 (17%)
Query: 408 IDMGSFGSVYKGILD-EGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G FG V+K +GKT + +K + + A + E AL + H N+V
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYV-IKRVKYNNEKAER----EVKALAKLDHVNIVHYNGCW 73
Query: 467 SGVDYKGDDFKA-----------LVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQ 513
G DY + + EF G+LE+W+ G DK + L +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL----ALELFE 129
Query: 514 RINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTS 573
+I +D Y+H + DLKPSN+ L + DFGL L +
Sbjct: 130 QITKGVD------YIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR 180
Query: 574 SIGVKGTIGYIAPAE---YGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
S KGT+ Y++P + G EV D+Y+ G++L EL+ D FE + +
Sbjct: 181 S---KGTLRYMSPEQISSQDYGKEV----DLYALGLILAELL---HVCDTAFETSKFFTD 230
Query: 631 FARTVLPDHVMDIVDSTLL 649
++ D + D + TLL
Sbjct: 231 LRDGIISD-IFDKKEKTLL 248
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 13 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 69 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 114
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + TSS+G K +
Sbjct: 115 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPV 170
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 171 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 219
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKV-LNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G++G VYK + G+T K+ L G ++I E S L+ ++H N+VK+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 467 SGVDYKGDDFKALVYEFMH-NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
K LV F H + L++ L G ++V A L LQ +N +
Sbjct: 70 HTK-------KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--LQLLN-------GI 113
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
Y H H DLKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYR 167
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELM 612
AP + S D++S G + E++
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKV-LNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G++G VYK + G+T K+ L G ++I E S L+ ++H N+VK+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 467 SGVDYKGDDFKALVYEFMH-NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
K LV F H + L++ L G ++V A L LQ +N +
Sbjct: 70 HTK-------KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL--LQLLN-------GI 113
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
Y H H DLKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 114 AYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV---VTLWYR 167
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELM 612
AP + S D++S G + E++
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMV 195
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 99
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 100 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 146
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 147 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 201
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 202 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 82
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 83 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 129
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 184
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 185 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 221
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 21/175 (12%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 113 YAKNGCLLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 159
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVY 602
P N+LL+ +M + DFG AK+L P Q + GT Y++P E S + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP-ELLTEKSASKSSDLW 218
Query: 603 SYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 219 ALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 272
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 12 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 68 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 113
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + TSS+G K +
Sbjct: 114 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPV 169
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 170 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 28 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 84 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 129
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + TSS+G K +
Sbjct: 130 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPV 185
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 186 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNL-LHHGASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G++ +VYKG+ +A+K + L G ++I E S ++ ++H+N+V++ V
Sbjct: 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT- 74
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTV-EAPKCLNFLQRINIAIDVACALKYL 528
++ LV+EFM N L++++ +TV P+ L + L +
Sbjct: 75 ----ENKLTLVFEFMDN-DLKKYM-----DSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYIAPA 587
H + H DLKP N+L++ + DFGLA+ P + +S + T+ Y AP
Sbjct: 125 HEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV---VTLWYRAPD 178
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRK 615
S + D++S G +L E++T K
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 19 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 75 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 120
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + TSS+G K +
Sbjct: 121 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSVGSKFPV 176
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 177 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 25/223 (11%)
Query: 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI--AECSALRNIRH 456
F FL ++ G ++KG +G I+ VKVL + KS EC LR H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN 516
N++ +L C L+ +M GSL LH G + V+ + + F
Sbjct: 67 PNVLPVLGACQS---PPAPHPTLITHWMPYGSLYNVLH--EGTNFVVDQSQAVKF----- 116
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
A+D+A + +L H +P L +V++D +MTA ++ + S G
Sbjct: 117 -ALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSPG 167
Query: 577 VKGTIGYIAPAEYGLGSEVS--INGDVYSYGILLLELMTRKRP 617
++AP E + + D++S+ +LL EL+TR+ P
Sbjct: 168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVP 210
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 110 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 156
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 157 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE---LLTEKSACKSSD 213
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 214 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 269
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 89 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 135
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 136 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 192
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 193 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 248
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 109
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 110 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 156
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 157 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 211
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 212 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL ++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEYMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 88 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 134
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 135 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 191
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 192 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 131/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASK-SSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L ++ + + E + H+N+V+
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR--- 112
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 113 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 167
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA---DFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL VA DFG+A+ + A +
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 225 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 270
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 271 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 310
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 311 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 338
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 157
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE---LLTEKSACKSSD 214
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 270
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 90 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 136
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 137 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 193
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 194 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 249
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 411 GSFGSV-----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG V Y + K ++AVK L A K E L N++H+++VK V
Sbjct: 26 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGV 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTV-------EAPKCLNFLQRINIA 518
C GD +V+E+M +G L ++L G D + +A L Q ++IA
Sbjct: 86 CG----DGDPL-IMVFEYMKHGDLNKFLR-AHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+A + YL H DL N L+ + + DFG+++ +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I ++ P E + + + DV+S+G++L E+ T
Sbjct: 197 LPIRWM-PPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 91 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 137
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 138 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 194
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 195 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 250
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 110 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 156
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 157 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 213
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 214 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 269
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 49/246 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-------ECSALRNIRHKNLV 460
I G FG V+KG L + K+++A+K L L I E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 461 KILTVCSGVDYKGDDFKALVYEFMHNGSLEEWL----HPVSGADKTVEAPKCLNFLQRIN 516
K+ + + +V EF+ G L L HP+ + K +
Sbjct: 87 KLYGLMH-------NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK-------------LR 126
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLL-----DHEMTAHVADFGLAKLLPPAHLQ 571
+ +D+A ++Y+ + P H DL+ N+ L + + A VADFG + Q
Sbjct: 127 LMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS--------Q 177
Query: 572 TSSIGVKGTIG---YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S V G +G ++AP G E + D YS+ ++L ++T + P D G +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 628 LHNFAR 633
N R
Sbjct: 238 FINMIR 243
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 123 RVLHRD---------LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 114 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 160
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE---LLTEKSACKSSD 217
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 218 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 273
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 95 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 141
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 142 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 198
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 199 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 254
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 74 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 126 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 173
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 174 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 640 VM 641
V+
Sbjct: 229 VV 230
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 72 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 124 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 171
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 172 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 640 VM 641
V+
Sbjct: 227 VV 228
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 75 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 127 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 174
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 175 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 640 VM 641
V+
Sbjct: 230 VV 231
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 74 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 126 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 173
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 174 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 640 VM 641
V+
Sbjct: 229 VV 230
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 73 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 125 RVLHRD---------LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 172
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 173 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 640 VM 641
V+
Sbjct: 228 VV 229
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 73 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 125 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 172
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 173 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 640 VM 641
V+
Sbjct: 228 VV 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-------ECSALRNIRHKNLV 460
I G FG V+KG L + K+++A+K L L I E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 461 KILTVCSGVDYKGDDFKALVYEFMHNGSLEEWL----HPVSGADKTVEAPKCLNFLQRIN 516
K+ + +V EF+ G L L HP+ + K +
Sbjct: 87 KLYGLMHNP-------PRMVMEFVPCGDLYHRLLDKAHPIKWSVK-------------LR 126
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLL-----DHEMTAHVADFGLAKLLPPAHLQ 571
+ +D+A ++Y+ + P H DL+ N+ L + + A VADF L+ Q
Sbjct: 127 LMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS--------Q 177
Query: 572 TSSIGVKGTIG---YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S V G +G ++AP G E + D YS+ ++L ++T + P D G +
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237
Query: 628 LHNFAR 633
N R
Sbjct: 238 FINMIR 243
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 73 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 125 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 172
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 173 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 640 VM 641
V+
Sbjct: 228 VV 229
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 70 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 122 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 169
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 170 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 640 VM 641
V+
Sbjct: 225 VV 226
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 72 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 124 RVLHRD---------LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 171
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 172 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 640 VM 641
V+
Sbjct: 227 VV 228
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 70 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 122 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 169
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 170 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 640 VM 641
V+
Sbjct: 225 VV 226
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILD-EGKTIIAVKV-LNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK G+ + K+ L+ G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILD-EGKTIIAVKV-LNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK G+ + K+ L+ G ++I E S L+ + H N+VK+L V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 70 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 122 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 169
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 170 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 640 VM 641
V+
Sbjct: 225 VV 226
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 157
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 214
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 270
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 159
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 216
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 272
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 159
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 216
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 272
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 114 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 160
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 161 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 217
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 218 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 273
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
LV M+ G + ++ V + + P+ + + +I L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH---QRNIIY 312
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSIN 598
DLKP NVLLD + ++D GLA L QT + G GT G++AP E LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAP-ELLLGEEYDFS 369
Query: 599 GDVYSYGILLLELMTRKRP 617
D ++ G+ L E++ + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
LV M+ G + ++ V + + P+ + + +I L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH---QRNIIY 312
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSIN 598
DLKP NVLLD + ++D GLA L QT + G GT G++AP E LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAP-ELLLGEEYDFS 369
Query: 599 GDVYSYGILLLELMTRKRP 617
D ++ G+ L E++ + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 157
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 214
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 270
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 71 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 123 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 170
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 171 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 640 VM 641
V+
Sbjct: 226 VV 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 111 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 157
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 158 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 214
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 215 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 270
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 130/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + + H+N+V+
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR--- 112
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 113 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 167
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA---DFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL VA DFG+A+ + A +
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 225 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 270
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 271 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 310
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 311 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 338
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 159
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 216
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 272
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 429 AVKVLNLLH---HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
A+K+L H E + + H VK L C ++ D+ +
Sbjct: 66 AIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK-LYFC----FQDDEKLYFGLSYAK 120
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
NG L +++ + D+T C F ++ AL+YLH H DLKP N
Sbjct: 121 NGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLKPEN 167
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGDVYS 603
+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D+++
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSDLWA 224
Query: 604 YGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 225 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 277
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G I E +T +AVK +N + + I E S ++ ++V++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
L V S KG +V E M +G L+ +L + + + I +A ++A
Sbjct: 86 LGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ H DL N ++ H+ T + DFG+ + + G KG
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLP 195
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP G + + D++S+G++L E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
LV M+ G + ++ V + + P+ + + +I L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH---QRNIIY 312
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSIN 598
DLKP NVLLD + ++D GLA L QT + G GT G++AP E LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAP-ELLLGEEYDFS 369
Query: 599 GDVYSYGILLLELMTRKRP 617
D ++ G+ L E++ + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
LV M+ G + ++ V + + P+ + + +I L++LH Q +
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH---QRNIIY 312
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSIN 598
DLKP NVLLD + ++D GLA L QT + G GT G++AP E LG E +
Sbjct: 313 RDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAP-ELLLGEEYDFS 369
Query: 599 GDVYSYGILLLELMTRKRP 617
D ++ G+ L E++ + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEXMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G I E +T +AVK +N + + I E S ++ ++V++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
L V S KG +V E M +G L+ +L + + + I +A ++A
Sbjct: 86 LGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ H DL N ++ H+ T + DFG+ + + G KG
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLP 195
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP G + + D++S+G++L E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 107/239 (44%), Gaps = 34/239 (14%)
Query: 404 FLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVK 461
FL + G FG V G G+ +A+K ++ G+ I E + N+ H+ LV+
Sbjct: 13 FLKELGTGQFGVVKYGKW-RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ VC+ + F ++ E+M NG L +L + +T Q + + DV
Sbjct: 69 LYGVCTK---QRPIF--IITEYMANGCLLNYLREMRHRFQTQ---------QLLEMCKDV 114
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
A++YL H DL N L++ + V+DFGL++ + TSS G K +
Sbjct: 115 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-TSSRGSKFPV 170
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHV 640
+ +P E + S+ S D++++G+L+ E+ + G M F + +H+
Sbjct: 171 RW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSL---------GKMPYERFTNSETAEHI 219
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 82
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E M NGSL+ +L +Q + + +A
Sbjct: 83 ---EGVVTKSKPV-MIVTEXMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 129
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 184
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 185 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 221
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 33 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 89
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 90 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 144
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA---DFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL VA DFG+A+ + A +
Sbjct: 145 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 202 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 247
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 248 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 287
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 288 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 315
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 408 IDMGSFGSVYK----GILD-EGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVK 461
I G+FG V++ G+L E T++AVK+L ++ E + + + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG--------ADKTVEA------PK 507
+L VC+ G L++E+M G L E+L +S +D + A P
Sbjct: 115 LLGVCA----VGKPM-CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 508 CLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPP 567
L+ +++ IA VA + YL + H DL N L+ M +ADFGL++ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 568 AHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
A + I ++ P E + + DV++YG++L E+ +
Sbjct: 227 ADYYKADGNDAIPIRWM-PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 112
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 113 -CIGVSLQSLP-RFILMELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 167
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA---DFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL VA DFG+A+ + A +
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 225 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 270
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 271 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 310
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 311 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 338
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 130/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + + H+N+V+
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR--- 98
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 99 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 153
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 211 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 256
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 257 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 296
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 297 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 324
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 116 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 162
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 163 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 219
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F+ + L ++F P D+V+ L+ D
Sbjct: 220 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK-ARDLVEKLLVLD 275
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G I E +T +AVK +N + + I E S ++ ++V++
Sbjct: 25 GSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHVVRL 82
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
L V S KG +V E M +G L+ +L + + + I +A ++A
Sbjct: 83 LGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ H DL N ++ H+ T + DFG+ + + G KG
Sbjct: 138 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--XETDXXRKGGKGLLP 192
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP G + + D++S+G++L E+ +
Sbjct: 193 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 224
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L+ ++ + A + P ++L ++ + +
Sbjct: 74 IHT-----ENKLYLVFEFLHQ-DLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 126 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 173
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 174 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 640 VM 641
V+
Sbjct: 229 VV 230
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+H L++++ + A + P ++L ++ + +
Sbjct: 72 IHT-----ENKLYLVFEFLHQ-DLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 124 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 171
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
AP E LG + S D++S G + E++TR+ +F G+ + R
Sbjct: 172 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFR 216
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 114
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 115 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 169
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 227 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 272
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 273 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 312
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 313 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 340
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 97
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 98 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 152
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 210 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 255
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 256 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 295
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 296 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 323
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 97
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 98 -CIGVSLQSLP-RFILMELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 152
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 210 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 255
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 256 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 295
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 296 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 323
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G I E +T +AVK +N + + I E S ++ ++V++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
L V S KG +V E M +G L+ +L + + + I +A ++A
Sbjct: 86 LGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK-LLPPAHLQTSSIGVKGTI 581
+ YL+ H DL N ++ H+ T + DFG+ + + A+ + G+ +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL-PV 196
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
++AP G + + D++S+G++L E+ +
Sbjct: 197 RWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGKG---IIHRDLK 159
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVY 602
P N+LL+ +M + DFG AK+L P Q + GT Y++P E + D++
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP-ELLTEKSAXKSSDLW 218
Query: 603 SYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+ G ++ +L+ R ++F + L ++F P D+V+ L+ D
Sbjct: 219 ALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 272
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPV--SGADKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + A+ V AP L+ + I +A +
Sbjct: 94 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAGE 146
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 147 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGL 201
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 202 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 138
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 139 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 193
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA---DFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL VA DFG+A+ + A +
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 251 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 296
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 297 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 336
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 337 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 364
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 98
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 99 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 153
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 211 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 256
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 257 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 296
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 297 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 324
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGILD---EGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
I G FG V G L + + +A+K L + + + + E S + H N++ +
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL- 88
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E+M NGSL+ +L G +Q + + ++
Sbjct: 89 ---EGVVTKSKPV-MIVTEYMENGSLDTFLKKNDGQ---------FTVIQLVGMLRGISA 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 190
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + AP S + DV+SYGI++ E+++ +RP
Sbjct: 191 IRWTAPEAIAFRKFTSAS-DVWSYGIVMWEVVSYGERP 227
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 410 MGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
+G+FG V G +AVK+LN + E L+ RH +++K+ V
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
S DF +V E++ G L +++ VE + Q+I A+D
Sbjct: 81 S----TPTDF-FMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVD------ 125
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H + H DLKP NVLLD M A +ADFGL+ ++ +S G+ Y AP
Sbjct: 126 YCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAP 179
Query: 587 ----AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
G EV D++S G++L L+ P D
Sbjct: 180 EVISGRLYAGPEV----DIWSCGVILYALLCGTLPFD 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 483 FMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
+ NG L +++ + D+T C F ++ AL+YLH H DLK
Sbjct: 113 YAKNGELLKYIRKIGSFDET-----CTRFY-----TAEIVSALEYLHGK---GIIHRDLK 159
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI--NGD 600
P N+LL+ +M + DFG AK+L P Q + GT Y++P L +E S + D
Sbjct: 160 PENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE---LLTEKSACKSSD 216
Query: 601 VYSYGILLLELMT-----RKRPSDIMFEGNMNL-HNFARTVLPDHVMDIVDSTLLAD 651
+++ G ++ +L+ R ++F + L ++F P D+V+ L+ D
Sbjct: 217 LWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK-ARDLVEKLLVLD 272
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 104
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 105 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 159
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 160 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 217 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 262
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 263 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 302
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 303 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 330
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 26 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 83
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPV--SGADKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + A+ V AP L+ + I +A +
Sbjct: 84 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS--KMIQMAGE 136
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 137 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGL 191
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 192 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 428 IAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHN 486
+A+K L + + ++E S + H N++++ GV +G +V E+M N
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL----EGVVTRGR-LAMIVTEYMEN 134
Query: 487 GSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV 546
GSL+ +L G +Q + + V ++YL H DL NV
Sbjct: 135 GSLDTFLRTHDGQ---------FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNV 182
Query: 547 LLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYS 603
L+D + V+DFGL+++L P A T+ G K I + AP + S DV+S
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTT--GGKIPIRWTAPEAIAFRT-FSSASDVWS 239
Query: 604 YGILLLELMTR-KRP 617
+G+++ E++ +RP
Sbjct: 240 FGVVMWEVLAYGERP 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 428 IAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHN 486
+A+K L + + ++E S + H N++++ GV +G +V E+M N
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL----EGVVTRGR-LAMIVTEYMEN 134
Query: 487 GSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV 546
GSL+ +L G +Q + + V ++YL H DL NV
Sbjct: 135 GSLDTFLRTHDGQ---------FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNV 182
Query: 547 LLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYS 603
L+D + V+DFGL+++L P A T+ G K I + AP + S DV+S
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTT--GGKIPIRWTAPEAIAFRT-FSSASDVWS 239
Query: 604 YGILLLELMTR-KRP 617
+G+++ E++ +RP
Sbjct: 240 FGVVMWEVLAYGERP 254
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V KT +A+K ++ H + ++ E L RH+N++ I
Sbjct: 48 LQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIR 107
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +A+ ++ +E L+ + + + C Q +
Sbjct: 108 DIL-----RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ-------ILR 155
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-GTIG 582
LKY+H H DLKPSN+L++ + DFGLA++ P H T + T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 213 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 261
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVA 684
I+ S EDL N + R N ++ L S ++ A
Sbjct: 262 GILGS---PSQEDLNCIINMKAR-----NYLQSLPSKTKVAWA 296
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG V+ + ++ K ++AVK L A + E L ++H+++V+ V
Sbjct: 29 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHP-------VSGADKTVEAPKCLNFLQRINIA 518
C+ +G +V+E+M +G L +L ++G + AP L Q + +A
Sbjct: 89 CT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV--APGPLGLGQLLAVA 141
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
VA + YL H DL N L+ + + DFG+++ + T V
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI----YSTDYYRVG 194
Query: 579 GT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
G I ++ P E L + + DV+S+G++L E+ T
Sbjct: 195 GRTMLPIRWM-PPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G++ +VYKG ++A+K + L H GA ++I E S L++++H N+V + +
Sbjct: 13 GTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT- 71
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+ LV+E++ + L+++L C N + N+ + + L+ L
Sbjct: 72 ----EKSLTLVFEYL-DKDLKQYL------------DDCGNIINMHNVKLFLFQLLRGLA 114
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
+ + H DLKP N+L++ +ADFGLA+ + T + + + P +
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDI 171
Query: 590 GLGS-EVSINGDVYSYGILLLELMT 613
LGS + S D++ G + E+ T
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMAT 196
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKIL 463
+ G FG V G L + + +A+K L + + + + E S + H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL- 111
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
GV K +V E M NGSL+ +L +Q + + +A
Sbjct: 112 ---EGVVTKSKPV-MIVTEXMENGSLDSFLRKHDAQ---------FTVIQLVGMLRGIAS 158
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL---PPAHLQTSSIGVKGT 580
+KYL H DL N+L++ + V+DFGL+++L P A T G K
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMTR-KRP 617
I + +P S + DV+SYGI+L E+M+ +RP
Sbjct: 214 IRWTSPEAIAYRKFTSAS-DVWSYGIVLWEVMSYGERP 250
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 98
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 99 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 153
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 211 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 256
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 257 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 296
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 297 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 324
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG V+ + ++ K ++AVK L A + E L ++H+++V+ V
Sbjct: 52 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 111
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHP-------VSGADKTVEAPKCLNFLQRINIA 518
C+ +G +V+E+M +G L +L ++G + AP L Q + +A
Sbjct: 112 CT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV--APGPLGLGQLLAVA 164
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
VA + YL H DL N L+ + + DFG+++ + T V
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI----YSTDYYRVG 217
Query: 579 GT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
G I ++ P E L + + DV+S+G++L E+ T
Sbjct: 218 GRTMLPIRWM-PPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 59 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 115
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 116 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 170
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA---DFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL VA DFG+A+ + A +
Sbjct: 171 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 228 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 273
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 274 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 313
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 314 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 341
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 129/337 (38%), Gaps = 63/337 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKILT 464
G+FG VY+G + D +AVK L + + E + H+N+V+
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR--- 124
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
C GV + + ++ E M G L+ +L P L L +++A D+AC
Sbjct: 125 -CIGVSLQSLP-RFILLELMAGGDLKSFLRETR---PRPSQPSSLAMLDLLHVARDIACG 179
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+YL + H D+ N LL A + DFG+A+ + A +
Sbjct: 180 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
++ P + G S D +S+G+LL E+ + G M + + V+
Sbjct: 237 KWMPPEAFMEGIFTS-KTDTWSFGVLLWEIFSL---------GYMPYPSKSN----QEVL 282
Query: 642 DIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
+ V S R++ C V RI C P+DR N I+
Sbjct: 283 EFVTSG------------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII-- 322
Query: 702 ELQSIKSILLGPKTVSNKQKAIPILLEVRSYGPKLKE 738
L+ I+ P ++ A+PI YGP ++E
Sbjct: 323 -LERIEYCTQDPDVINT---ALPI-----EYGPLVEE 350
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 93/217 (42%), Gaps = 32/217 (14%)
Query: 410 MGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
+G+FG V G +AVK+LN + E L+ RH +++K+ V
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
S DF +V E++ G L +++ VE + Q+I A+D
Sbjct: 81 S----TPTDF-FMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAVD------ 125
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H + H DLKP NVLLD M A +ADFGL+ ++ S G+ Y AP
Sbjct: 126 YCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAP 179
Query: 587 ----AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
G EV D++S G++L L+ P D
Sbjct: 180 EVISGRLYAGPEV----DIWSCGVILYALLCGTLPFD 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG V+ + ++ K ++AVK L A + E L ++H+++V+ V
Sbjct: 23 GAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 82
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHP-------VSGADKTVEAPKCLNFLQRINIA 518
C+ +G +V+E+M +G L +L ++G + AP L Q + +A
Sbjct: 83 CT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDV--APGPLGLGQLLAVA 135
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
VA + YL H DL N L+ + + DFG+++ + T V
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI----YSTDYYRVG 188
Query: 579 GT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
G I ++ P E L + + DV+S+G++L E+ T
Sbjct: 189 GRTMLPIRWM-PPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 113/306 (36%), Gaps = 60/306 (19%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVK-VLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G+FG V+ G L T++AVK L + E L+ H N+V+++ VC
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ +V E + G +L GA V+ LQ + D A ++
Sbjct: 182 T-----QKQPIYIVMELVQGGDFLTFLR-TEGARLRVK-----TLLQMVG---DAAAGME 227
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
YL C H DL N L+ + ++DFG+++ S + + + AP
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAP 284
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDS 646
G S DV+S+GILL E + + P+
Sbjct: 285 EALNYG-RYSSESDVWSFGILLWETFS-----------------LGASPYPN-------- 318
Query: 647 TLLADDEDLTITSNQRQRQ-----ARINNIMECLISVVRIGVACSMESPQDRMNMTIVVH 701
SNQ+ R+ R+ C +V R+ C P R + + +
Sbjct: 319 -----------LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367
Query: 702 ELQSIK 707
ELQSI+
Sbjct: 368 ELQSIR 373
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 119/307 (38%), Gaps = 62/307 (20%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVK-VLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
I G+FG V+ G L T++AVK L + E L+ H N+V+++ VC
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ K + +V E + G +L GA V+ LQ + D A ++
Sbjct: 182 T---QKQPIY--IVMELVQGGDFLTFLR-TEGARLRVK-----TLLQMVG---DAAAGME 227
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT-IGYIA 585
YL C H DL N L+ + ++DFG+++ + +S G++ + + A
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG-VXAASGGLRQVPVKWTA 283
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVD 645
P G S DV+S+GILL E + + P+
Sbjct: 284 PEALNYG-RYSSESDVWSFGILLWETFS-----------------LGASPYPN------- 318
Query: 646 STLLADDEDLTITSNQRQRQ-----ARINNIMECLISVVRIGVACSMESPQDRMNMTIVV 700
SNQ+ R+ R+ C +V R+ C P R + + +
Sbjct: 319 ------------LSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIY 366
Query: 701 HELQSIK 707
ELQSI+
Sbjct: 367 QELQSIR 373
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 21 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 78
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 79 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 131
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 132 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--XETDXXRKGGKGL 186
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 187 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 220
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 78
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G + + L +S D+ QR I ++A AL
Sbjct: 79 -YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----------QRTATYITELANAL 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 178
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 234
Query: 641 MD 642
+
Sbjct: 235 TE 236
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G I E +T +AVK +N + + I E S ++ ++V++
Sbjct: 28 GSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHVVRL 85
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
L V S KG +V E M +G L+ +L + + + I +A ++A
Sbjct: 86 LGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ H DL N ++ H+ T + DFG+ + + G KG
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 195
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP G + + D++S+G++L E+ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI-IAVKVLNLLHH---GASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + I V ++ L A+K + E + ++ + ++ ++L +
Sbjct: 60 GAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 119
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 120 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 165 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 222 -LESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 78
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G + + L +S D+ QR I ++A AL
Sbjct: 79 -YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE-----------QRTATYITELANAL 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLXGTLDYL- 178
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 234
Query: 641 MD 642
+
Sbjct: 235 TE 236
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKG-----ILDEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G I E +T +AVK +N + + I E S ++ ++V++
Sbjct: 27 GSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHVVRL 84
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
L V S KG +V E M +G L+ +L + + + I +A ++A
Sbjct: 85 LGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ H DL N ++ H+ T + DFG+ + + G KG
Sbjct: 140 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRKGGKGLLP 194
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP G + + D++S+G++L E+ +
Sbjct: 195 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITS 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 87
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 88 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 140
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 141 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--XETDXXRKGGKGL 195
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 196 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 74
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 75 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T S GT+ Y+
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYL- 174
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 230
Query: 641 MD 642
+
Sbjct: 231 TE 232
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 380 TIAVKLAAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN- 434
+ ++ A L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L
Sbjct: 2 AMGIRSGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 435 LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLH 494
A+K + E + ++ + ++ ++L +C + L+ + M G L
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCL----- 110
Query: 495 PVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554
D E + +N + +A + YL H DL NVL+
Sbjct: 111 ----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFGLAKLL + + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 380 TIAVKLAAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN- 434
+ ++ A L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L
Sbjct: 2 AMGIRSGEAPNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 435 LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLH 494
A+K + E + ++ + ++ ++L +C + L+ + M G L
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL----- 110
Query: 495 PVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554
D E + +N + +A + YL H DL NVL+
Sbjct: 111 ----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFGLAKLL + + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G+V+K E I+A+K + L G S++ E L+ ++HKN+V++ V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
D LV+EF + L+++ +G D E K F + L
Sbjct: 70 LHS-----DKKLTLVFEFC-DQDLKKYFDSCNG-DLDPEIVKSFLF--------QLLKGL 114
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ H H DLKP N+L++ +ADFGLA+ P ++ + T+ Y
Sbjct: 115 GFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV---VTLWYR 168
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625
P S + D++S G + EL RP +F GN
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAARP---LFPGN 206
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLNL-LHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKGI + +G+ + +A+KVL A+K + E + + + ++L +
Sbjct: 28 GAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGI 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + LV + M G L D E L +N + +A +
Sbjct: 88 CLTSTVQ------LVTQLMPYGCL---------LDHVRENRGRLGSQDLLNWCMQIAKGM 132
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL D + H DL NVL+ + DFGLA+LL + + G K I ++A
Sbjct: 133 SYLE-DVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 190 -LESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 87 CLTSTVQ------LIMQLMPFGXL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 189 -LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 29/230 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+E +H L+ ++ + A + P ++L ++ + +
Sbjct: 70 IHT-----ENKLYLVFEHVHQ-DLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P T + T+ Y
Sbjct: 122 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV---VTLWYR 169
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
AP E LG + S D++S G + E++TR+ +F G+ + R
Sbjct: 170 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFR 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 90 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 192 -LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 78
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 79 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 178
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 234
Query: 641 MD 642
+
Sbjct: 235 TE 236
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 99
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 100 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 147
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 199
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 255
Query: 641 MD 642
+
Sbjct: 256 TE 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 76
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 77 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 176
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 232
Query: 641 MD 642
+
Sbjct: 233 TE 234
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 74
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 75 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT----LCGTLDYL- 174
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 230
Query: 641 MD 642
+
Sbjct: 231 TE 232
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 86 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 188 -LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 89 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 191 -LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 24/228 (10%)
Query: 391 SVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSI 445
L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L A+K +
Sbjct: 6 QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 446 AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA 505
E + ++ + ++ ++L +C + L+ + M G L D E
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL---------LDYVREH 110
Query: 506 PKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL 565
+ +N + +A + YL H DL NVL+ + DFGLAKLL
Sbjct: 111 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
Query: 566 PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 168 GAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 78
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 79 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 178
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 234
Query: 641 MD 642
+
Sbjct: 235 TE 236
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 86 CLTSTVQ------LITQLMPFGXL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 188 -LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 88 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 190 -LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 380 TIAVKLAAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN- 434
+ ++ A L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L
Sbjct: 2 AMGIRSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 435 LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLH 494
A+K + E + ++ + ++ ++L +C + L+ + M G L
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL----- 110
Query: 495 PVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554
D E + +N + +A + YL H DL NVL+
Sbjct: 111 ----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFGLAKLL + + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHH-----GASKSSIAECSALRNIRHKNLVKILTV 465
G F +VYK I+A+K + L H G +++++ E L+ + H N++ +L
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLL-- 78
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+K + +LV++FM E L + + V P + + + L
Sbjct: 79 -DAFGHKSN--ISLVFDFM-----ETDLEVIIKDNSLVLTPSHIKAYMLMTLQ-----GL 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
+YLH Q H DLKP+N+LLD +ADFGLAK + V T Y A
Sbjct: 126 EYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRA 180
Query: 586 PAEYGLGSEV-SINGDVYSYGILLLELMTR 614
P E G+ + + D+++ G +L EL+ R
Sbjct: 181 P-ELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 87 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 189 -LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 86
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 87 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 139
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 140 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGL 194
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 195 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 36 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 90
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 91 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 138
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 139 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 190
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 191 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 246
Query: 641 MD 642
+
Sbjct: 247 TE 248
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 86 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 188 -LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 93
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 94 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 146
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 147 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI--YETDYYRKGGKGL 201
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 202 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 413 FGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIAECSALR-NIRHKNLVKILTVC 466
FG VYKG L E +A+K L G + + LR ++H N+V +L V
Sbjct: 39 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 98
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWL-----HPVSGA---DKTVEAPKCLNFLQRINIA 518
+ D ++++ + +G L E+L H G+ D+TV++ L +++
Sbjct: 99 TK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS--ALEPPDFVHLV 151
Query: 519 IDVACALKYL--HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+A ++YL HH H DL NVL+ ++ ++D GL + + A
Sbjct: 152 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I ++AP G + SI+ D++SYG++L E+ +
Sbjct: 207 SLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFS 242
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 42/235 (17%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVK 461
F L I GSFG VYKGI + K ++A+K+++L I + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-----------IT 69
Query: 462 ILTVCSG---VDYKGDDFKA----LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L+ C Y G K+ ++ E++ GS + L P P ++
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP---------GPLEETYIA- 119
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I ++ L YLH + + H D+K +NVLL + +ADFG+A L ++ +
Sbjct: 120 -TILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX 175
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629
GT ++AP E S D++S GI +EL + P N +LH
Sbjct: 176 F--VGTPFWMAP-EVIKQSAYDFKADIWSLGITAIELAKGEPP-------NSDLH 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 89 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 191 -LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 88 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 190 -LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASK-SSIAECSALRNIRHKNLVKILT 464
GSFG VY+G+ DE +T +A+K +N + + E S ++ ++V++L
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 82
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAIDVA 522
V S +G ++ E M G L+ +L + + V AP L+ + I +A ++A
Sbjct: 83 VVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 135
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLP 190
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 191 VRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 86 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 188 -LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 27 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 84
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 85 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 137
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 138 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGL 192
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 193 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 24/228 (10%)
Query: 391 SVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSI 445
L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L A+K +
Sbjct: 31 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 90
Query: 446 AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA 505
E + ++ + ++ ++L +C + L+ + M G L D E
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL---------LDYVREH 135
Query: 506 PKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL 565
+ +N + +A + YL H DL NVL+ + DFGLAKLL
Sbjct: 136 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
Query: 566 PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 193 GAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 36/215 (16%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVK 461
G FG V Y D ++AVK L L G + E LR + H+++VK
Sbjct: 19 GHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR----EIEILRTLYHEHIVK 74
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPK-CLNFLQRINIAID 520
C +G+ LV E++ GSL ++L P+ C+ Q + A
Sbjct: 75 YKGCCED---QGEKSVQLVMEYVPLGSLRDYL------------PRHCVGLAQLLLFAQQ 119
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ + YLH H L NVLLD++ + DFGLAK +P H + + G
Sbjct: 120 ICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGD 175
Query: 581 --IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + AP E + DV+S+G+ L EL+T
Sbjct: 176 SPVFWYAP-ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 89 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 191 -LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 92/215 (42%), Gaps = 36/215 (16%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVK 461
G FG V Y D ++AVK L L G + E LR + H+++VK
Sbjct: 20 GHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR----EIEILRTLYHEHIVK 75
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPK-CLNFLQRINIAID 520
C +G+ LV E++ GSL ++L P+ C+ Q + A
Sbjct: 76 YKGCCED---QGEKSVQLVMEYVPLGSLRDYL------------PRHCVGLAQLLLFAQQ 120
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ + YLH H L NVLLD++ + DFGLAK +P H + + G
Sbjct: 121 ICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGD 176
Query: 581 --IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + AP E + DV+S+G+ L EL+T
Sbjct: 177 SPVFWYAP-ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 72
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 73 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 120
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 121 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 172
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 228
Query: 641 MD 642
+
Sbjct: 229 TE 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 36 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 96 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 140
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 141 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 198 -LESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 89 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 133
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 191 -LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 86
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 87 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 139
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 140 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGL 194
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 195 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTV 465
G FG V Y D ++AVK L +S E LR + H++++K
Sbjct: 42 GHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGC 101
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C G LV E++ GSL ++L ++ + L F Q+I + A
Sbjct: 102 CEDA---GAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT--IGY 583
Y+H D L NVLLD++ + DFGLAK +P H + + G + +
Sbjct: 154 HYIHRD---------LAARNVLLDNDRLVKIGDFGLAKAVPEGH-EXYRVREDGDSPVFW 203
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMT 613
AP EY + DV+S+G+ L EL+T
Sbjct: 204 YAPECLKEY----KFYYASDVWSFGVTLYELLT 232
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASK-SSIAECSALRNIRHKNLVKILT 464
GSFG VY+G+ DE +T +A+K +N + + E S ++ ++V++L
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 89
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAIDVA 522
V S +G ++ E M G L+ +L + + V AP L+ + I +A ++A
Sbjct: 90 VVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGEIA 142
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG--T 580
+ YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGLLP 197
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 198 VRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 115
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 116 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 168
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N ++ + T + DFG+ + + G KG
Sbjct: 169 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGL 223
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 224 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 257
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKN 458
+ L I GS+G K I+ K L+ + + ++E + LR ++H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 459 LVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
+V+ +D + + +V E+ G L S K + + L+ + +
Sbjct: 67 IVRYYDRI--ID-RTNTTLYIVMEYCEGGDL------ASVITKGTKERQYLDEEFVLRVM 117
Query: 519 IDVACALKYLHH--DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+ ALK H D T H DLKP+NV LD + + DFGLA++L H + +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKA 175
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y++P + S + D++S G LL EL
Sbjct: 176 FVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYEL 209
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 38/216 (17%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNL----LHHGASKSSIAECSALRNIRHKNLVKI 462
G FG V Y D ++AVK L H K I LR + H++++K
Sbjct: 25 GHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI---DILRTLYHEHIIKY 81
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
C +G+ LV E++ GSL ++L ++ + L F Q+I +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT-- 580
A Y+H + L NVLLD++ + DFGLAK +P H + + G
Sbjct: 134 HAQHYIHRN---------LAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDSP 183
Query: 581 IGYIAP---AEYGLGSEVSINGDVYSYGILLLELMT 613
+ + AP EY + DV+S+G+ L EL+T
Sbjct: 184 VFWYAPECLKEY----KFYYASDVWSFGVTLYELLT 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 77
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 78 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 177
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 233
Query: 641 MD 642
+
Sbjct: 234 TE 235
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 32 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 92 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 136
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 137 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 194 -LESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 46/209 (22%)
Query: 429 AVKVLNLLHHGA---------SKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFKA 478
AVK++++ G+ ++++ E LR + H N++++ Y+ + F
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT-----YETNTFFF 100
Query: 479 LVYEFMHNGSLEEWL-HPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
LV++ M G L ++L V+ ++K E K + L ++V CAL L+
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEK--ETRKIMRAL------LEVICALHKLN------IV 146
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA---------E 588
H DLKP N+LLD +M + DFG + L P S V GT Y+AP
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS---VCGTPSYLAPEIIECSMNDNH 203
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKRP 617
G G EV D++S G+++ L+ P
Sbjct: 204 PGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+ + L++++ + A + P ++L ++ + +
Sbjct: 73 IHT-----ENKLYLVFEFL-SMDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 125 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 172
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 173 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 640 VM 641
V+
Sbjct: 228 VV 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 413 FGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIAECSALR-NIRHKNLVKILTVC 466
FG VYKG L E +A+K L G + + LR ++H N+V +L V
Sbjct: 22 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV 81
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWL-----HPVSGA---DKTVEAPKCLNFLQRINIA 518
+ D ++++ + +G L E+L H G+ D+TV++ L +++
Sbjct: 82 TK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS--ALEPPDFVHLV 134
Query: 519 IDVACALKYL--HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+A ++YL HH H DL NVL+ ++ ++D GL + + A
Sbjct: 135 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I ++AP G + SI+ D++SYG++L E+ +
Sbjct: 190 SLLPIRWMAPEAIMYG-KFSIDSDIWSYGVVLWEVFS 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 76
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 77 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 176
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 232
Query: 641 MD 642
+
Sbjct: 233 TE 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+ + L++++ + A + P ++L ++ + +
Sbjct: 74 IHT-----ENKLYLVFEFL-SMDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 126 RVLHRD---------LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 173
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 174 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 640 VM 641
V+
Sbjct: 229 VV 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 48/243 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIA-ECSALRNIRHKNLVKILTVCS 467
GSFG V + + +A+K ++ LL + E S L+ +RH +++K+ V +
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79
Query: 468 G-------VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID 520
++Y G + + E K + + F Q+I
Sbjct: 80 TPTDIVMVIEYAGGELFDYIVE-----------------KKRMTEDEGRRFFQQI----- 117
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
CA++Y H + H DLKP N+LLD + +ADFGL+ ++ + +S G+
Sbjct: 118 -ICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GS 170
Query: 581 IGYIAP----AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNM-NLHNFARTV 635
Y AP + G EV DV+S GI+L ++ + P D F N+ N V
Sbjct: 171 PNYAAPEVINGKLYAGPEV----DVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV 226
Query: 636 LPD 638
+PD
Sbjct: 227 MPD 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 35/223 (15%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVK 461
F L I GSFG V+KGI + + ++A+K+++L + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEIT 77
Query: 462 ILTVCSG---VDYKGDDFK----ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L+ C Y G K ++ E++ GS + L P P L+ Q
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---------GP--LDETQI 126
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I ++ L YLH + + H D+K +NVLL +ADFG+A L ++ ++
Sbjct: 127 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 183
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT ++AP E S D++S GI +EL + P
Sbjct: 184 F--VGTPFWMAP-EVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 20 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 79
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 80 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 125 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 182 -LESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 23 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 82
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 83 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAEGM 127
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFGLAKLL + + G K I ++A
Sbjct: 128 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 185 -LESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKN 458
+ L I GS+G K I+ K L+ + + ++E + LR ++H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 459 LVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
+V+ +D + + +V E+ G L S K + + L+ + +
Sbjct: 67 IVRYYDRI--ID-RTNTTLYIVMEYCEGGDL------ASVITKGTKERQYLDEEFVLRVM 117
Query: 519 IDVACALKYLHH--DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+ ALK H D T H DLKP+NV LD + + DFGLA++L H + +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKE 175
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y++P + S + D++S G LL EL
Sbjct: 176 FVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYEL 209
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+ + L++++ + A + P ++L ++ + +
Sbjct: 74 IHT-----ENKLYLVFEFL-SMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 126 RVLHRD---------LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 173
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 174 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 640 VM 641
V+
Sbjct: 229 VV 230
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 76
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 77 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYL- 176
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 232
Query: 641 MD 642
+
Sbjct: 233 TE 234
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+EF+ + L++++ + A + P ++L ++ + +
Sbjct: 72 IHT-----ENKLYLVFEFL-SMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH D LKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 124 RVLHRD---------LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 171
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 172 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 640 VM 641
V+
Sbjct: 227 VV 228
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 70
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 71 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 118
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 119 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 170
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 226
Query: 641 MD 642
+
Sbjct: 227 TE 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 46/209 (22%)
Query: 429 AVKVLNLLHHGA---------SKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFKA 478
AVK++++ G+ ++++ E LR + H N++++ Y+ + F
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT-----YETNTFFF 87
Query: 479 LVYEFMHNGSLEEWL-HPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
LV++ M G L ++L V+ ++K E K + L ++V CAL L+
Sbjct: 88 LVFDLMKKGELFDYLTEKVTLSEK--ETRKIMRAL------LEVICALHKLN------IV 133
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA---------E 588
H DLKP N+LLD +M + DFG + L P V GT Y+AP
Sbjct: 134 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLAPEIIECSMNDNH 190
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKRP 617
G G EV D++S G+++ L+ P
Sbjct: 191 PGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKN 458
+ L I GS+G K I+ K L+ + + ++E + LR ++H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 459 LVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
+V+ +D + + +V E+ G L S K + + L+ + +
Sbjct: 67 IVRYYDRI--ID-RTNTTLYIVMEYCEGGDL------ASVITKGTKERQYLDEEFVLRVM 117
Query: 519 IDVACALKYLHH--DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+ ALK H D T H DLKP+NV LD + + DFGLA++L H + +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKT 175
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y++P + S + D++S G LL EL
Sbjct: 176 FVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYEL 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 74
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 75 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 122
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 123 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYL- 174
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 230
Query: 641 MD 642
+
Sbjct: 231 TE 232
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V + G+ E + +AVK+L H K ++ +E + ++ +H+N+V +L
Sbjct: 49 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 108
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
C+ + G ++ E+ G L +L + AD E + L ++ + VA
Sbjct: 109 GACT---HGGPVL--VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT--- 580
+ +L H D+ NVLL + A + DFGLA+ + + S+ VKG
Sbjct: 164 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIVKGNARL 216
Query: 581 -IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP E ++ DV+SYGILL E+ +
Sbjct: 217 PVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTELCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 87/218 (39%), Gaps = 41/218 (18%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+FGSV Y + D ++AVK L + E L+ + +VK V
Sbjct: 18 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 77
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G G LV E++ +G L +FLQR +D + L
Sbjct: 78 YG---PGRPELRLVMEYLPSGCLR-------------------DFLQRHRARLDASRLLL 115
Query: 527 YLHHDCQ-------PTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK- 578
Y C+ H DL N+L++ E +ADFGLAKLLP L V+
Sbjct: 116 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDXXVVRE 172
Query: 579 ---GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
I + AP + S DV+S+G++L EL T
Sbjct: 173 PGQSPIFWYAPESLS-DNIFSRQSDVWSFGVVLYELFT 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 38/216 (17%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNL----LHHGASKSSIAECSALRNIRHKNLVKI 462
G FG V Y D ++AVK L H K I LR + H++++K
Sbjct: 25 GHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEI---DILRTLYHEHIIKY 81
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
C +G+ LV E++ GSL ++L S + Q + A +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-----------IGLAQLLLFAQQIC 127
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT-- 580
+ YLH H +L NVLLD++ + DFGLAK +P H + + G
Sbjct: 128 EGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGH-EYYRVREDGDSP 183
Query: 581 IGYIAP---AEYGLGSEVSINGDVYSYGILLLELMT 613
+ + AP EY + DV+S+G+ L EL+T
Sbjct: 184 VFWYAPECLKEY----KFYYASDVWSFGVTLYELLT 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 75
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 76 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYL- 175
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 231
Query: 641 MD 642
+
Sbjct: 232 TE 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 35/223 (15%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVK 461
F L I GSFG V+KGI + + ++A+K+++L + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEIT 57
Query: 462 ILTVCSG---VDYKGDDFK----ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L+ C Y G K ++ E++ GS + L P P L+ Q
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---------GP--LDETQI 106
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I ++ L YLH + + H D+K +NVLL +ADFG+A L ++ ++
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 163
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT ++AP E S D++S GI +EL + P
Sbjct: 164 F--VGTPFWMAP-EVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 78
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 79 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 126
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 127 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYL- 178
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 234
Query: 641 MD 642
+
Sbjct: 235 TE 236
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSIA---ECSALRNIRHKNLVKI 462
GSFG VY+G+ DE +T +A+K +N + + I E S ++ ++V++
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFLNEASVMKEFNCHHVVRL 80
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA--DKTVEAPKCLNFLQRINIAID 520
L V S +G ++ E M G L+ +L + + V AP L+ + I +A +
Sbjct: 81 LGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS--KMIQMAGE 133
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG- 579
+A + YL+ + H DL N + + T + DFG+ + + G KG
Sbjct: 134 IADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK--GGKGL 188
Query: 580 -TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ +++P G + DV+S+G++L E+ T
Sbjct: 189 LPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHK 457
+F F+ + GSFG V + E + AVKVL +L + ++ E L R+
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
+ L C ++ D V EF++ G L + + + + EA
Sbjct: 84 PFLTQLFCC----FQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARF-------Y 129
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A ++ AL +LH + DLK NVLLDHE +ADFG+ K + T++
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC- 185
Query: 578 KGTIGYIAPA---EYGLGSEVSINGDVYSYGILLLELMTRKRP-----SDIMFEGNMN 627
GT YIAP E G V D ++ G+LL E++ P D +FE +N
Sbjct: 186 -GTPDYIAPEILQEMLYGPAV----DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 238
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V + G+ E + +AVK+L H K ++ +E + ++ +H+N+V +L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
C+ + G ++ E+ G L +L + AD E + L ++ + VA
Sbjct: 117 GACT---HGGPVL--VITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT--- 580
+ +L H D+ NVLL + A + DFGLA+ + + S+ VKG
Sbjct: 172 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIVKGNARL 224
Query: 581 -IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP E ++ DV+SYGILL E+ +
Sbjct: 225 PVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTXLCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 410 MGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
+G+FG V G + +AVK+LN + E L+ RH +++K+ V
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
S D F +V E++ G L +++ + ++ + Q+I +D
Sbjct: 86 ST---PSDIF--MVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVD------ 130
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H + H DLKP NVLLD M A +ADFGL+ ++ S G+ Y AP
Sbjct: 131 YCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAP 184
Query: 587 ----AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
G EV D++S G++L L+ P D
Sbjct: 185 EVISGRLYAGPEV----DIWSSGVILYALLCGTLPFD 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 25/215 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNIRHKNLVKIL 463
I GSF +VYKG+ E T + V L +KS E L+ ++H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
KG LV E +G+L+ +L V C L+
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILK---------- 140
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEM-TAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
L++LH P H DLK N+ + + + D GLA L + + V GT
Sbjct: 141 GLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPE 195
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ AP Y + S+ DVY++G LE T + P
Sbjct: 196 FXAPEXYEEKYDESV--DVYAFGXCXLEXATSEYP 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 24/228 (10%)
Query: 391 SVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSI 445
L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L A+K +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 446 AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA 505
E + ++ + ++ ++L +C + L+ + M G L D E
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCL---------LDYVREH 112
Query: 506 PKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL 565
+ +N + +A + YL H DL NVL+ + DFG AKLL
Sbjct: 113 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 566 PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 24/239 (10%)
Query: 380 TIAVKLAAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN- 434
+ ++ A L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L
Sbjct: 2 AMGIRSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 435 LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLH 494
A+K + E + ++ + ++ ++L +C + L+ + M G L
Sbjct: 62 ATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL----- 110
Query: 495 PVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA 554
D E + +N + +A + YL H DL NVL+
Sbjct: 111 ----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHV 163
Query: 555 HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFG AKLL + + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+FGSV Y + D ++AVK L + E L+ + +VK V
Sbjct: 21 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 80
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G G LV E++ +G L +FLQR +D + L
Sbjct: 81 YG---PGRQSLRLVMEYLPSGCLR-------------------DFLQRHRARLDASRLLL 118
Query: 527 YLHHDCQ-------PTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK- 578
Y C+ H DL N+L++ E +ADFGLAKLLP L V+
Sbjct: 119 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVRE 175
Query: 579 ---GTIGYIAPAEYGLGSEV-SINGDVYSYGILLLELMT 613
I + AP L + S DV+S+G++L EL T
Sbjct: 176 PGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 75
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 76 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 123
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +A+FG + P + T + GT+ Y+
Sbjct: 124 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYL- 175
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 231
Query: 641 MD 642
+
Sbjct: 232 TE 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 411 GSFGSVYKGILDE-------GKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKIL 463
G+F ++KG+ E +T + +KVL+ H S+S S + + HK+LV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
VC + GD+ LV EF+ GSL+ +L + C+N L ++ +A +A
Sbjct: 79 GVC----FCGDE-NILVQEFVKFGSLDTYLK---------KNKNCINILWKLEVAKQLAW 124
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV------ 577
A+ +L + T H ++ N+LL E + KL P SI V
Sbjct: 125 AMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG----ISITVLPKDIL 177
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ I ++ P +++ D +S+G L E+ +
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 76
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 77 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYL- 176
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 232
Query: 641 MD 642
+
Sbjct: 233 TE 234
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 99
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 100 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 147
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCGTLDYL- 199
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 255
Query: 641 MD 642
+
Sbjct: 256 TE 257
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLH--HGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G+V+K E I+A+K + L G S++ E L+ ++HKN+V++ V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
D LV+EF + L+++ +G D E K F + L
Sbjct: 70 LHS-----DKKLTLVFEFC-DQDLKKYFDSCNG-DLDPEIVKSFLF--------QLLKGL 114
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ H H DLKP N+L++ +A+FGLA+ P ++ + T+ Y
Sbjct: 115 GFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV---VTLWYR 168
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625
P S + D++S G + EL RP +F GN
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP---LFPGN 206
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 88 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 132
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFG AKLL + + G K I ++A
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 190 -LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 46/209 (22%)
Query: 429 AVKVLNLLHHGA---------SKSSIAECSALRNIR-HKNLVKILTVCSGVDYKGDDFKA 478
AVK++++ G+ ++++ E LR + H N++++ Y+ + F
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT-----YETNTFFF 100
Query: 479 LVYEFMHNGSLEEWL-HPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
LV++ M G L ++L V+ ++K E K + L ++V CAL L+
Sbjct: 101 LVFDLMKKGELFDYLTEKVTLSEK--ETRKIMRAL------LEVICALHKLN------IV 146
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA---------E 588
H DLKP N+LLD +M + DFG + L P V GT Y+AP
Sbjct: 147 HRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCGTPSYLAPEIIECSMNDNH 203
Query: 589 YGLGSEVSINGDVYSYGILLLELMTRKRP 617
G G EV D++S G+++ L+ P
Sbjct: 204 PGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 26/197 (13%)
Query: 427 IIAVKVLNLLHHGASKSSI-AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
++A+K+++ G+ I E AL+N+RH+++ ++ V + +V E+
Sbjct: 37 MVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKI-----FMVLEYCP 91
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G L ++ + D+ E + F Q + A+ Y+H AH DLKP N
Sbjct: 92 GGELFDY---IISQDRLSEEETRVVFRQ-------IVSAVAYVH---SQGYAHRDLKPEN 138
Query: 546 VLLDHEMTAHVADFGLA---KLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVY 602
+L D + DFGL K HLQT G++ Y AP S + DV+
Sbjct: 139 LLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC----GSLAYAAPELIQGKSYLGSEADVW 194
Query: 603 SYGILLLELMTRKRPSD 619
S GILL LM P D
Sbjct: 195 SMGILLYVLMCGFLPFD 211
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 90 CLTSTVQ------LIMQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFG AKLL + + G K I ++A
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 192 -LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+FGSV Y + D ++AVK L + E L+ + +VK V
Sbjct: 22 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 81
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G G LV E++ +G L +FLQR +D + L
Sbjct: 82 YG---PGRQSLRLVMEYLPSGCLR-------------------DFLQRHRARLDASRLLL 119
Query: 527 YLHHDCQ-------PTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK- 578
Y C+ H DL N+L++ E +ADFGLAKLLP L V+
Sbjct: 120 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVRE 176
Query: 579 ---GTIGYIAPAEYGLGSEV-SINGDVYSYGILLLELMT 613
I + AP L + S DV+S+G++L EL T
Sbjct: 177 PGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVK 461
F L I GSFG V+KGI + + ++A+K+++L + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEIT 72
Query: 462 ILTVCSG---VDYKGDDFK----ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L+ C Y G K ++ E++ GS + L P P L+ Q
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---------GP--LDETQI 121
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I ++ L YLH + + H D+K +NVLL +ADFG+A L ++ +
Sbjct: 122 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 178
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT ++AP E S D++S GI +EL + P
Sbjct: 179 F--VGTPFWMAP-EVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 24/228 (10%)
Query: 391 SVLVGILLFVSFLFLCWIDMGSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSI 445
L+ IL F + + G+FG+VYKG+ + EG+ + +A+K L A+K +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 67
Query: 446 AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA 505
E + ++ + ++ ++L +C + L+ + M G L D E
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL---------LDYVREH 112
Query: 506 PKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL 565
+ +N + +A + YL H DL NVL+ + DFG AKLL
Sbjct: 113 KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
Query: 566 PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + G K I ++A E L + DV+SYG+ + ELMT
Sbjct: 170 GAEEKEYHAEGGKVPIKWMA-LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 411 GSFGSV----YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+FGSV Y + D ++AVK L + E L+ + +VK V
Sbjct: 34 GNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVS 93
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
G G LV E++ +G L +FLQR +D + L
Sbjct: 94 YG---PGRQSLRLVMEYLPSGCLR-------------------DFLQRHRARLDASRLLL 131
Query: 527 YLHHDCQ-------PTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK- 578
Y C+ H DL N+L++ E +ADFGLAKLLP L V+
Sbjct: 132 YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP---LDKDYYVVRE 188
Query: 579 ---GTIGYIAPAEYGLGSEV-SINGDVYSYGILLLELMT 613
I + AP L + S DV+S+G++L EL T
Sbjct: 189 PGQSPIFWYAPE--SLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 97/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY K I+A+KVL L G E ++RH N++++
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 73
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 74 -YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 121
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYL- 173
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQDTYKRISRVEFTFPDFV 229
Query: 641 MD 642
+
Sbjct: 230 TE 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 48/271 (17%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI- 106
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
D +A E M + L L GAD L+ +++ D C
Sbjct: 107 ---------NDIIRAPTIEQMKDVYLVTHL---MGAD-------LYKLLKTQHLSNDHIC 147
Query: 524 --------ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
LKY+H H DLKPSN+LL+ + DFGLA++ P H T +
Sbjct: 148 YFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 204
Query: 576 G-VKGTIGYIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
T Y AP E L S+ + + D++S G +L E+++ RP +F G L
Sbjct: 205 TEYVATRWYRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL-- 257
Query: 634 TVLPDHVMDIVDSTLLADDEDLTITSNQRQR 664
+H++ I+ S EDL N + R
Sbjct: 258 ----NHILGILGS---PSQEDLNCIINLKAR 281
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 76
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 77 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + + GT+ Y+
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCGTLDYL- 176
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 232
Query: 641 MD 642
+
Sbjct: 233 TE 234
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVK 461
F L I GSFG V+KGI + + ++A+K+++L + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEIT 57
Query: 462 ILTVCSG---VDYKGDDFK----ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L+ C Y G K ++ E++ GS + L P P L+ Q
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---------GP--LDETQI 106
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I ++ L YLH + + H D+K +NVLL +ADFG+A L ++ +
Sbjct: 107 ATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX 163
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT ++AP E S D++S GI +EL + P
Sbjct: 164 F--VGTPFWMAP-EVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 411 GSFGSVYKGI-LDEGKTI---IAVKVLN-LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G+FG+VYKG+ + EG+ + +A+K L A+K + E + ++ + ++ ++L +
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
C + L+ + M G L D E + +N + +A +
Sbjct: 86 CLTSTVQ------LITQLMPFGCL---------LDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL H DL NVL+ + DFG AKLL + + G K I ++A
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
E L + DV+SYG+ + ELMT
Sbjct: 188 -LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 76
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 77 -YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE-----------QRTATYITELANAL 124
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +A+FG + P + T + GT+ Y+
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT----LCGTLDYL- 176
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + K P FE N + R PD V
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFV 232
Query: 641 MD 642
+
Sbjct: 233 TE 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 35/227 (15%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVK 461
F L I GSFG V+KGI + + ++A+K+++L + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-----------EAEDEIEDIQQEIT 73
Query: 462 ILTVCSG---VDYKGDDFKA----LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L+ C Y G K ++ E++ GS + L P + Q
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---------GP--FDEFQI 122
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
+ ++ L YLH + + H D+K +NVLL + +ADFG+A L ++ ++
Sbjct: 123 ATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 179
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621
GT ++AP E S D++S GI +EL + P+ M
Sbjct: 180 F--VGTPFWMAP-EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK----NLVKILTVC 466
G+FGSV +G+ K I V + +L G K+ E I H+ +V+++ VC
Sbjct: 21 GNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 79
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ LV E G L ++L G + + L ++++ +K
Sbjct: 80 QA------EALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMG------MK 124
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL--PPAHLQTSSIGVKGTIGYI 584
YL + H DL NVLL + A ++DFGL+K L ++ S G K + +
Sbjct: 125 YLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWY 180
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+SYG+ + E ++
Sbjct: 181 APECINF-RKFSSRSDVWSYGVTMWEALS 208
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFI-NLQTLHMWDNQL 140
K LD+ +N L P + L L N NK+ +++PAGI K + NL+TL + DN+L
Sbjct: 40 KKLDLQSNKLSSL-PSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKL 97
Query: 141 SGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQC 199
+L NL L ++ N+L P +L KL L L N LQ S+P + +
Sbjct: 98 QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKL 156
Query: 200 QSLTTINLSYNNLSGTIPPQLMD-LTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISR 258
SL + L YNN +P D LT L L L NQL L L++L +
Sbjct: 157 TSLKELRL-YNNQLKRVPEGAFDKLTELKT-LKLDNNQLKRVPEGAFDSLEKLKMLQLQE 214
Query: 259 NMLEC 263
N +C
Sbjct: 215 NPWDC 219
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 77/184 (41%), Gaps = 3/184 (1%)
Query: 101 NFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAIN 160
N + L SNK+ + L+ L++ DN+L + EL+NL TL +
Sbjct: 34 NIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93
Query: 161 TNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQL 220
NKL L L +L L N L+ P LT ++L YN L ++P +
Sbjct: 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGV 152
Query: 221 MD-LTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTLGSCIKLEQLK 279
D LTSL L L NQL KL L+ L + N L+ S KL+ L+
Sbjct: 153 FDKLTSLK-ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQ 211
Query: 280 LGGN 283
L N
Sbjct: 212 LQEN 215
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 22/149 (14%)
Query: 3 VGVNRVQGGIPLDFGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVP 62
V N++Q +P+ L NL L L NQ+ + P + +KL + N L
Sbjct: 92 VTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK 150
Query: 63 SEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPA 122
F K T LK L + NN + G + L+TL ++N++ R +P
Sbjct: 151 GVFDKLT----------SLKELRLYNNQLKRVPEGAFDKLT-ELKTLKLDNNQLKR-VPE 198
Query: 123 GIGKFINLQTLHM-------WDNQLSGTI 144
G F +L+ L M WD +G I
Sbjct: 199 GA--FDSLEKLKMLQLQENPWDCTCNGII 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GS+GSVYK I E I+A+K + + + I E S ++ ++VK G
Sbjct: 40 GSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVKYY----GSY 93
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+K D +V E+ GS+ + + +KT+ + LQ L+YLH
Sbjct: 94 FKNTDL-WIVMEYCGAGSVSDI---IRLRNKTLTEDEIATILQ------STLKGLEYLHF 143
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYG 590
H D+K N+LL+ E A +ADFG+A L + + V GT ++AP
Sbjct: 144 ---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPE--- 195
Query: 591 LGSEVSIN--GDVYSYGILLLELMTRKRP 617
+ E+ N D++S GI +E+ K P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 411 GSFGSVYKGILDE-------GKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKIL 463
G+F ++KG+ E +T + +KVL+ H S+S S + + HK+LV
Sbjct: 19 GTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNY 78
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
VC GD+ LV EF+ GSL+ +L + C+N L ++ +A +A
Sbjct: 79 GVCVC----GDE-NILVQEFVKFGSLDTYLK---------KNKNCINILWKLEVAKQLAA 124
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV------ 577
A+ +L + T H ++ N+LL E + KL P SI V
Sbjct: 125 AMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG----ISITVLPKDIL 177
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ I ++ P +++ D +S+G L E+ +
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 41/229 (17%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V GI G +I +AVK+L + + ++ +E + + H+N+V +L
Sbjct: 56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLL 115
Query: 464 TVC--SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA----------DKTVEAPKCLN- 510
C SG Y L++E+ G L +L K +E + LN
Sbjct: 116 GACTLSGPIY-------LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 511 --FLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA 568
F + A VA +++L + H DL NVL+ H + DFGLA+ +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI--- 222
Query: 569 HLQTSSIGVKGT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ S+ V+G + ++AP G +I DV+SYGILL E+ +
Sbjct: 223 -MSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 128/320 (40%), Gaps = 62/320 (19%)
Query: 408 IDMGSFGSVYKG-ILDEGKTII--AVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
I G FG VY G +D+ + I A+K L+ + ++ + E +R + H N++ ++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
G+ + ++ +M +G L +++ + TV+ I+ + VA
Sbjct: 89 ----GIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVK--------DLISFGLQVAR 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
++YL + H DL N +LD T VADFGLA+ + L V+
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI----LDREYYSVQQHRHA 188
Query: 584 IAPAEY-GLGS----EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638
P ++ L S + DV+S+G+LL EL+TR P P
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP-------------------PY 229
Query: 639 HVMDIVDST-LLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRMNMT 697
+D D T LA R+ C S+ ++ C P R
Sbjct: 230 RHIDPFDLTHFLAQGR-------------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFR 276
Query: 698 IVVHELQSIKSILLGPKTVS 717
++V E++ I S LLG V
Sbjct: 277 VLVGEVEQIVSALLGDHYVQ 296
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+ G+VY + +A++ +NL + I E +R ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 84
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V E++ GSL + V C++ Q + + AL++
Sbjct: 85 --SYLVGDELWVVMEYLAGGSLTD-----------VVTETCMDEGQIAAVCRECLQALEF 131
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
LH + H D+K N+LL + + + DFG + P + S++ GT ++AP
Sbjct: 132 LHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYWMAPE 186
Query: 587 --AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G +V D++S GI+ +E++ + P
Sbjct: 187 VVTRKAYGPKV----DIWSLGIMAIEMIEGEPP 215
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 27/234 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
GSF VY+ +A+K+++ + G + E ++H +++++
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY-- 79
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
++ ++ LV E HNG + +L K + +F+ +I + Y
Sbjct: 80 ---FEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQI------ITGMLY 127
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
LH H DL SN+LL M +ADFGLA L H + ++ GT YI+P
Sbjct: 128 LH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISP- 181
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
E S + DV+S G + L+ + P F+ + + + VL D+ M
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPP----FDTDTVKNTLNKVVLADYEM 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 33/242 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNL--LHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G++G VYK ++A+K + L G ++I E S L+ + H N+VK+L V
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+E + + L++++ + A + P ++L ++ + +
Sbjct: 74 IH-----TENKLYLVFEHV-DQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
+ LH DLKP N+L++ E +ADFGLA+ P + T+ Y
Sbjct: 126 RVLHR---------DLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV---VTLWYR 173
Query: 585 APAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV----LPDH 639
AP E LG + S D++S G + E++TR+ +F G+ + R PD
Sbjct: 174 AP-EILLGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 640 VM 641
V+
Sbjct: 229 VV 230
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 26/213 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVKILTVCSG 468
G FG V G +G+ +AVK++ G+ E + + H LVK VCS
Sbjct: 19 GQFGVVKLGKW-KGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+Y +V E++ NG L L+ + K +E Q + + DV + +L
Sbjct: 75 -EYP----IYIVTEYISNGCL---LNYLRSHGKGLEPS------QLLEMCYDVCEGMAFL 120
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H DL N L+D ++ V+DFG+ + + SS+G K + + AP
Sbjct: 121 E---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEV 176
Query: 589 YGLGSEVSINGDVYSYGILLLELMTR-KRPSDI 620
+ + S DV+++GIL+ E+ + K P D+
Sbjct: 177 FHY-FKYSSKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A ++ C L+ LH + + DLKP N+LLD ++D GLA +P + G
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGR 345
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT+GY+AP E + + D ++ G LL E++ + P
Sbjct: 346 VGTVGYMAP-EVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A ++ C L+ LH + + DLKP N+LLD ++D GLA +P + G
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGR 345
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT+GY+AP E + + D ++ G LL E++ + P
Sbjct: 346 VGTVGYMAP-EVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 25/223 (11%)
Query: 399 FVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI--AECSALRNIRH 456
F FL ++ G ++KG +G I+ VKVL + KS EC LR H
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN 516
N++ +L C L+ + GSL LH G + V+ + + F
Sbjct: 67 PNVLPVLGACQSPPAP---HPTLITHWXPYGSLYNVLH--EGTNFVVDQSQAVKF----- 116
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
A+D A +L H +P L +V +D + TA ++ + S G
Sbjct: 117 -ALDXARGXAFL-HTLEPLIPRHALNSRSVXIDEDXTARISXADVK-------FSFQSPG 167
Query: 577 VKGTIGYIAPAEYGLGSEVS--INGDVYSYGILLLELMTRKRP 617
++AP E + + D +S+ +LL EL+TR+ P
Sbjct: 168 RXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP 210
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+ G+VY + +A++ +NL + I E +R ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 84
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V E++ GSL + V C++ Q + + AL++
Sbjct: 85 --SYLVGDELWVVMEYLAGGSLTD-----------VVTETCMDEGQIAAVCRECLQALEF 131
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
LH + H D+K N+LL + + + DFG + P + S + GT ++AP
Sbjct: 132 LHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM--VGTPYWMAPE 186
Query: 587 --AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G +V D++S GI+ +E++ + P
Sbjct: 187 VVTRKAYGPKV----DIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+ G+VY + +A++ +NL + I E +R ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 84
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V E++ GSL + V C++ Q + + AL++
Sbjct: 85 --SYLVGDELWVVMEYLAGGSLTD-----------VVTETCMDEGQIAAVCRECLQALEF 131
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
LH + H D+K N+LL + + + DFG + P + S + GT ++AP
Sbjct: 132 LHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYWMAPE 186
Query: 587 --AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G +V D++S GI+ +E++ + P
Sbjct: 187 VVTRKAYGPKV----DIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+ G+VY + +A++ +NL + I E +R ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 85
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V E++ GSL + V C++ Q + + AL++
Sbjct: 86 --SYLVGDELWVVMEYLAGGSLTD-----------VVTETCMDEGQIAAVCRECLQALEF 132
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
LH + H D+K N+LL + + + DFG + P + S + GT ++AP
Sbjct: 133 LHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM--VGTPYWMAPE 187
Query: 587 --AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G +V D++S GI+ +E++ + P
Sbjct: 188 VVTRKAYGPKV----DIWSLGIMAIEMIEGEPP 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 133
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 191 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 239
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S + EDL N + R
Sbjct: 240 GILGS---PEQEDLNCIINLKAR 259
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
+V E++ +L + +H E P + + I + D AL + H Q H
Sbjct: 110 IVMEYVDGVTLRDIVH--------TEGP--MTPKRAIEVIADACQALNFSH---QNGIIH 156
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
D+KP+N+++ V DFG+A+ + + + T + V GT Y++P E G V
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDA 215
Query: 598 NGDVYSYGILLLELMTRKRP 617
DVYS G +L E++T + P
Sbjct: 216 RSDVYSLGCVLYEVLTGEPP 235
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
+V E++ +L + +H E P + + I + D AL + H Q H
Sbjct: 93 IVMEYVDGVTLRDIVH--------TEGP--MTPKRAIEVIADACQALNFSH---QNGIIH 139
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
D+KP+N+++ V DFG+A+ + + + T + V GT Y++P E G V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDA 198
Query: 598 NGDVYSYGILLLELMTRKRP 617
DVYS G +L E++T + P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
+V E++ +L + +H E P + + I + D AL + H Q H
Sbjct: 93 IVMEYVDGVTLRDIVH--------TEGP--MTPKRAIEVIADACQALNFSH---QNGIIH 139
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
D+KP+N+++ V DFG+A+ + + + T + V GT Y++P E G V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDA 198
Query: 598 NGDVYSYGILLLELMTRKRP 617
DVYS G +L E++T + P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
+V E++ +L + +H E P + + I + D AL + H Q H
Sbjct: 93 IVMEYVDGVTLRDIVH--------TEGP--MTPKRAIEVIADACQALNFSH---QNGIIH 139
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
D+KP+N+++ V DFG+A+ + + + T + V GT Y++P E G V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDA 198
Query: 598 NGDVYSYGILLLELMTRKRP 617
DVYS G +L E++T + P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
+V E++ +L + +H E P + + I + D AL + H Q H
Sbjct: 93 IVMEYVDGVTLRDIVH--------TEGP--MTPKRAIEVIADACQALNFSH---QNGIIH 139
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
D+KP+N+++ V DFG+A+ + + + T + V GT Y++P E G V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP-EQARGDSVDA 198
Query: 598 NGDVYSYGILLLELMTRKRP 617
DVYS G +L E++T + P
Sbjct: 199 RSDVYSLGCVLYEVLTGEPP 218
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 409 DMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
++G FG VYK E + A KV++ + + E L + H N+VK+L
Sbjct: 19 ELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-- 76
Query: 469 VDYKGDDFKALVYEFMHNGSLE----EWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
Y ++ L+ EF G+++ E P++ + V + L+ A
Sbjct: 77 --YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-------------A 120
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYI 584
L YLH + H DLK N+L + +ADFG++ +Q + GT ++
Sbjct: 121 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI-GTPYWM 176
Query: 585 APA----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
AP E DV+S GI L+E+ + P
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 193 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 241
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 242 GILGS---PSQEDLNXIINLKAR 261
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 77
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 78 -YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----------QRTATYITELANAL 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT----LCGTLDYL- 177
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + P FE + + R PD V
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP----FEAHTYQETYRRISRVEFTFPDFV 233
Query: 641 MD 642
+
Sbjct: 234 TE 235
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL----- 77
Query: 468 GVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI-DVACAL 525
Y D + L+ E+ G++ L +S D+ QR I ++A AL
Sbjct: 78 -YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----------QRTATYITELANAL 125
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
Y H H D+KP N+LL +ADFG + P + T + GT+ Y+
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT----LCGTLDYL- 177
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART-----VLPDHV 640
P E G D++S G+L E + P FE + + R PD V
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP----FEAHTYQETYRRISRVEFTFPDFV 233
Query: 641 MD 642
+
Sbjct: 234 TE 235
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA-SKSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 197 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 245
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 246 GILGS---PSQEDLNCIINLKAR 265
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 197 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 245
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 246 GILGS---PSQEDLNCIINLKAR 265
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 193 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 241
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 242 GILGS---PSQEDLNCIINLKAR 261
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 457 KNLVKILT--------VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKC 508
KN ++I+T C G+ D+ ++YE+M N S+ ++ DK C
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEV-YIIYEYMENDSILKFDEYFFVLDKNYT---C 146
Query: 509 LNFLQRINIAID-VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPP 567
+Q I I V + Y+H+ + H D+KPSN+L+D ++DFG ++ +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 568 AHLQTSSIGVKGTIGYIAPAEYGLGSEVSING---DVYSYGILL 608
++ G +GT ++ P +E S NG D++S GI L
Sbjct: 205 KKIK----GSRGTYEFMPPE--FFSNESSYNGAKVDIWSLGICL 242
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 193 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 241
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 242 GILGS---PSQEDLNXIINLKAR 261
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 30/262 (11%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 584 IAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMD 642
E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHILG 246
Query: 643 IVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 247 ILGS---PSQEDLNCIINLKAR 265
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 107/262 (40%), Gaps = 30/262 (11%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 140
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + +
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 584 IAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMD 642
E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHILG 247
Query: 643 IVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 248 ILGS---PSQEDLNCIINLKAR 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 26 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM----- 80
Query: 468 GVDYKGDDFK-ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+Y D + L+ EF G L + L D+ A F++ ++A AL
Sbjct: 81 -YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA----TFME------ELADALH 129
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H + H D+KP N+L+ ++ +ADFG + P + GT+ Y+ P
Sbjct: 130 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL-P 181
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
E G D++ G+L E + P D
Sbjct: 182 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F +LEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKTLEE-FQDVYLVMELMDA----NLXQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 238
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM----- 79
Query: 468 GVDYKGDDFK-ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+Y D + L+ EF G L + L D+ A F++ ++A AL
Sbjct: 80 -YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA----TFME------ELADALH 128
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H + H D+KP N+L+ ++ +ADFG + P + GT+ Y+ P
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL-P 180
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
E G D++ G+L E + P D
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI----AECSALRNIRHK 457
F+F + G+FG V+ L E ++ +V+ ++ S+ + AE L+++ H
Sbjct: 24 FIFKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N++KI V DY +V E G L E + K + ++++
Sbjct: 81 NIIKIFEVFE--DYHN---MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM-- 133
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH----VADFGLAKLLPPAHLQTS 573
AL Y H H DLKP N+L + + H + DFGLA+L
Sbjct: 134 ----MNALAYFHSQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKS---DEH 182
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
S GT Y+AP + +V+ D++S G+++ L+T
Sbjct: 183 STNAAGTALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLT 220
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 155
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 213 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 261
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 262 GILGS---PSQEDLNCIINLKAR 281
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV--- 186
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 187 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 238
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+ G+VY + +A++ +NL + I E +R ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD--- 85
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V E++ GSL + V C++ Q + + AL++
Sbjct: 86 --SYLVGDELWVVMEYLAGGSLTD-----------VVTETCMDEGQIAAVCRECLQALEF 132
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP- 586
LH + H ++K N+LL + + + DFG + P + S++ GT ++AP
Sbjct: 133 LHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM--VGTPYWMAPE 187
Query: 587 --AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G +V D++S GI+ +E++ + P
Sbjct: 188 VVTRKAYGPKV----DIWSLGIMAIEMIEGEPP 216
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVK--VLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G+FG V+K + +A+K ++ G +++ E L+ ++H+N+V ++ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
C + KA LV++F H ++G V L+ ++R+ +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQML--L 135
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTI 581
L Y+H + H D+K +NVL+ + +ADFGLA+ A + Q + +
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 582 GYIAPAEYGLGS-EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632
+ P E LG + D++ G ++ E+ TR S IM +GN H A
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 143
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 201 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 249
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 250 GILGS---PSQEDLNCIINLKAR 269
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 193 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 241
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 242 GILGS---PSQEDLNCIINLKAR 261
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A +V AL+YLH + DLKP N+LLD + DFG AK +P + +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-----TYXL 163
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT YIAP E + + D +S+GIL+ E++ P
Sbjct: 164 CGTPDYIAP-EVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 133
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 191 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 239
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 240 GILGS---PSQEDLNCIINLKAR 259
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 137
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 195 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 243
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 244 GILGS---PSQEDLNCIINLKAR 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 28/213 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + K I+A+KVL L G E ++RH N++++
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM----- 79
Query: 468 GVDYKGDDFK-ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+Y D + L+ EF G L + L D+ A F++ ++A AL
Sbjct: 80 -YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA----TFME------ELADALH 128
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H + H D+KP N+L+ ++ +ADFG + P + GT+ Y+ P
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYL-P 180
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
E G D++ G+L E + P D
Sbjct: 181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 140
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 198 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 246
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 247 GILGS---PSQEDLNCIINLKAR 266
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 141
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 199 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 247
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 248 GILGS---PSQEDLNCIINLKAR 267
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 132
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 190 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 238
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 239 GILGS---PSQEDLNCIINLKAR 258
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 197 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 245
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 246 GILGS---PSQEDLNCIINLKAR 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 139
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS------GADKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 140 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 252 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 135
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 193 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 241
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 242 GILGS---PSQEDLNCIINLKAR 261
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 402 FLFLCWIDMGSFGS--VYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
++ L I GSFG + K D + +I ++ + + S E + L N++H N+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 460 VKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGAD--KTVEAPKCLNFL--QRI 515
V+ F NGSL + G D K + A K + F Q +
Sbjct: 86 VQYRE-----------------SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQIL 128
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSS 574
+ + + ALK++H H D+K N+ L + T + DFG+A++L L +
Sbjct: 129 DWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC 185
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
I GT Y++P E + D+++ G +L EL T K
Sbjct: 186 I---GTPYYLSP-EICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA------DKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 99 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 211 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAH 538
+V E++ +L + +H E P + + I + D AL + H Q H
Sbjct: 93 IVMEYVDGVTLRDIVH--------TEGP--MTPKRAIEVIADACQALNFSH---QNGIIH 139
Query: 539 CDLKPSNVLLDHEMTAHVADFGLAKLLPPAH---LQTSSIGVKGTIGYIAPAEYGLGSEV 595
D+KP+N+L+ V DFG+A+ + + QT++ V GT Y++P E G V
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAA--VIGTAQYLSP-EQARGDSV 196
Query: 596 SINGDVYSYGILLLELMTRKRP 617
DVYS G +L E++T + P
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP 218
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKCQHLSNDHICYFLYQ-------ILR 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 197 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 245
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 246 GILGS---PSQEDLNCIINLKAR 265
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G++G VY G + IA+K + S+ E + ++++HKN+V+ L
Sbjct: 19 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-----S 73
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ + F + E + GSL L G K E + + F + + LKYLH
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE--QTIGFYTK-----QILEGLKYLHD 126
Query: 531 DCQPTTAHCDLKPSNVLLD-HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
+ H D+K NVL++ + ++DFG +K L A + + GT+ Y+AP
Sbjct: 127 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEII 181
Query: 590 GLGSE-VSINGDVYSYGILLLELMTRKRP 617
G D++S G ++E+ T K P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + ++
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS------GADKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 99 LLGACTQ-----DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 211 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 32 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 91
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS------GADKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 92 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 204 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 19/209 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G++G VY G + IA+K + S+ E + ++++HKN+V+ L
Sbjct: 33 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-----S 87
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ + F + E + GSL L G K E + + F + + LKYLH
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE--QTIGFYTK-----QILEGLKYLHD 140
Query: 531 DCQPTTAHCDLKPSNVLLD-HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
+ H D+K NVL++ + ++DFG +K L A + + GT+ Y+AP
Sbjct: 141 N---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEII 195
Query: 590 GLGSE-VSINGDVYSYGILLLELMTRKRP 617
G D++S G ++E+ T K P
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 28 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 87
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS------GADKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 88 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 200 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS------GADKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 99 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 211 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 137
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 195 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 243
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 244 GILGS---PSQEDLNCIINLKAR 263
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKL-LPPAHLQTSSIG 576
+ +++ AL YLH + + DLK NVLLD E + D+G+ K L P ++
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC- 214
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621
GT YIAP E G + + D ++ G+L+ E+M + P DI+
Sbjct: 215 --GTPNYIAP-EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 31 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 90
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS------GADKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 91 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 203 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 83
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA------DKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 84 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 196 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIT 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A++ ++ H + ++ E L RH+N++ I
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 139
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 197 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 245
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 246 GILGS---PSQEDLNCIINLKAR 265
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 94/231 (40%), Gaps = 23/231 (9%)
Query: 408 IDMGSFGSVYKG--ILDEGKTIIA-VKVLNLLHHGASKSSIAECSALRNIRHKNLVKILT 464
I G F VY+ +LD + V++ +L+ A I E L+ + H N++K
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
+ D+ +V E G L + + + + + + A
Sbjct: 100 -----SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF------VQLCSA 148
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYI 584
L+++H H D+KP+NV + + D GL + + T++ + GT Y+
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYM 203
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
+P E + + D++S G LL E+ + P + MNL++ + +
Sbjct: 204 SP-ERIHENGYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKKI 250
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIH 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK----NLVKILTVC 466
G+FGSV +G+ K I V + +L G K+ E I H+ +V+++ VC
Sbjct: 347 GNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 405
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ LV E G L ++L G + + L ++++ +K
Sbjct: 406 QA------EALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMG------MK 450
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL--PPAHLQTSSIGVKGTIGYI 584
YL + H +L NVLL + A ++DFGL+K L ++ S G K + +
Sbjct: 451 YLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWY 506
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+SYG+ + E ++
Sbjct: 507 APECINF-RKFSSRSDVWSYGVTMWEALS 534
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 32 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 85
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 86 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 126
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 127 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 180
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 181 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 232
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 31 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 84
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 85 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 125
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 126 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 179
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 180 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 231
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKL-LPPAHLQTSSIG 576
+ +++ AL YLH + + DLK NVLLD E + D+G+ K L P T+S
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSXF 181
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621
GT YIAP E G + + D ++ G+L+ E+M + P DI+
Sbjct: 182 C-GTPNYIAP-EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVK--VLNLLHHGASKSSIAECSALRNIRHKNLVKI 462
L I G+FG V+K + +A+K ++ G +++ E L+ ++H+N+V +
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 463 LTVCSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAI 519
+ +C + K LV++F H ++G V L+ ++R+ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVK 578
L Y+H + H D+K +NVL+ + +ADFGLA+ A + Q + +
Sbjct: 135 --LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 579 GTIGYIAPAEYGLGS-EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632
+ P E LG + D++ G ++ E+ TR S IM +GN H A
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVY--KGI-LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V + I LD+ K KV + +L A++ I+E ++ I +HKN++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA------DKTVEAPKCLNFLQRI 515
+L C+ D ++ E+ G+L E+L + + + L+ +
Sbjct: 99 LLGACTQ-----DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ A VA ++YL H DL NVL+ + +ADFGLA+ + +
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+LL E+ T
Sbjct: 211 NGRLPVKWMAP-EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 76 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 129
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE+ V + ++A N Q I + +D
Sbjct: 130 --------------FTPQKTLEEF-QDVYLVMELMDA----NLCQVIQMELDHERMSYLL 170
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 171 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 224
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 225 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 276
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 32/263 (12%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-KSSIAECSALRNIRHKNLVKIL 463
L +I G++G V + K +A+K ++ H + ++ E L RH+N++ I
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
+ + +V + M E L+ + C Q +
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLM-----ETDLYKLLKTQHLSNDHICYFLYQ-------ILR 137
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG-VKGTIG 582
LKY+H H DLKPSN+LL+ + DFGLA++ P H T + T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVM 641
Y AP E L S+ + + D++S G +L E+++ RP +F G L +H++
Sbjct: 195 YRAP-EIMLNSKGYTKSIDIWSVGCILAEMLS-NRP---IFPGKHYLDQL------NHIL 243
Query: 642 DIVDSTLLADDEDLTITSNQRQR 664
I+ S EDL N + R
Sbjct: 244 GILGS---PSQEDLNCGINLKAR 263
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 54/252 (21%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-------HKNLVKIL 463
G++G V+K I ++AVK + A ++S R I H+N+V +L
Sbjct: 20 GAYGIVWKSIDRRTGEVVAVKKI----FDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V D LV+++M E LH V A+ L + + + +
Sbjct: 76 NVLRA---DNDRDVYLVFDYM-----ETDLHAVIRAN-------ILEPVHKQYVVYQLIK 120
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK----- 578
+KYLH H D+KPSN+LL+ E VADFGL++ T++I +
Sbjct: 121 VIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 579 --------------GTIGYIAPAEYGLGSEVSING-DVYSYGILLLELMTRKRPSDIMFE 623
T Y AP E LGS G D++S G +L E++ K +F
Sbjct: 178 ENFDDDQPILTDYVATRWYRAP-EILLGSTKYTKGIDMWSLGCILGEILCGKP----IFP 232
Query: 624 GNMNLHNFARTV 635
G+ ++ R +
Sbjct: 233 GSSTMNQLERII 244
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 186
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 187 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 238
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 115/283 (40%), Gaps = 47/283 (16%)
Query: 346 ASAISVFGNSKLCGGIPEFQLPICGLEKSKHKRLTIAVKLAAAIISVLVGILLFVSFLFL 405
+ +S ++ + G+ E++LP + +LT+ L
Sbjct: 50 TTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGE------------------ 91
Query: 406 CWIDMGSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RH 456
G FG V +D+ K AV V + +L A++ ++E ++ I +H
Sbjct: 92 -----GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LN 510
KN++ +L C+ D ++ E+ G+L E+L G + + + + +
Sbjct: 147 KNIINLLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 511 FLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHL 570
F ++ +A ++YL H DL NVL+ +ADFGLA+ +
Sbjct: 202 FKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 258
Query: 571 QTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + + ++AP E + DV+S+G+L+ E+ T
Sbjct: 259 YKKTTNGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 39 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 92
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 93 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 133
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 134 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 187
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 188 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 239
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 186
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 187 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 32 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 85
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 86 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 126
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 127 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 180
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 181 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 232
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 37 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 90
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 91 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 131
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 132 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 185
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 186 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 237
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 39 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 92
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 93 --------------FTPQKTLEE-FQDVYLVMELMDA----NLCQVIQMELDHERMSYLL 133
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 134 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 187
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 188 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 239
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG VYK E + A KV++ + + E L + H N+VK+L
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF---- 103
Query: 471 YKGDDFKALVYEFMHNGSLE----EWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
Y ++ L+ EF G+++ E P++ + V + L+ AL
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-------------ALN 149
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL-AKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK N+L + +ADFG+ AK + S I GT ++A
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI---GTPYWMA 203
Query: 586 PA----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E DV+S GI L+E+ + P
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG VYK E + A KV++ + + E L + H N+VK+L
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF---- 103
Query: 471 YKGDDFKALVYEFMHNGSLE----EWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
Y ++ L+ EF G+++ E P++ + V + L+ AL
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-------------ALN 149
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL-AKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK N+L + +ADFG+ AK + S I GT ++A
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI---GTPYWMA 203
Query: 586 PA----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E DV+S GI L+E+ + P
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKL-LPPAHLQTSSIG 576
+ +++ AL YLH + + DLK NVLLD E + D+G+ K L P T+S
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSXF 166
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621
GT YIAP E G + + D ++ G+L+ E+M + P DI+
Sbjct: 167 C-GTPNYIAP-EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 76 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 129
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE+ V + ++A N Q I + +D
Sbjct: 130 --------------FTPQKTLEEF-QDVYLVMELMDA----NLCQVIQMELDHERMSYLL 170
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 171 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 224
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 225 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 140/342 (40%), Gaps = 55/342 (16%)
Query: 382 AVKLAAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKV----LNLLH 437
A A I VLV ++ ++ G F ++ + K + A K+ L L
Sbjct: 3 AAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP 62
Query: 438 HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS 497
H K S+ E S R++ H+++V ++ +DF +V E SL E LH
Sbjct: 63 HQREKMSM-EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE-LH--- 112
Query: 498 GADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557
K + P+ +L++I + +YLH + H DLK N+ L+ ++ +
Sbjct: 113 KRRKALTEPEARYYLRQIVLGC------QYLHRN---RVIHRDLKLGNLFLNEDLEVKIG 163
Query: 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVSINGDVYSYGILLLELMTR 614
DFGLA + + ++ GT YIAP ++ G EV DV+S G ++ L+
Sbjct: 164 DFGLATKVEYDGERKKTLC--GTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVG 217
Query: 615 KRPSDIMFEGNMNLHNFART-----VLPDHVMDIVDS---TLLADDEDLTITSNQRQRQ- 665
K P FE + + R +P H+ + S +L D T N+
Sbjct: 218 KPP----FETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDE 273
Query: 666 --------ARINNIMECLISVVRIGVACSMESPQDRMNMTIV 699
AR+ + CL R +A S P +R +T++
Sbjct: 274 FFTSGYIPARLP--ITCLTIPPRFSIAPSSLDPSNRKPLTVL 313
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKL-LPPAHLQTSSIG 576
+ +++ AL YLH + + DLK NVLLD E + D+G+ K L P T+S
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--DTTSXF 170
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621
GT YIAP E G + + D ++ G+L+ E+M + P DI+
Sbjct: 171 C-GTPNYIAP-EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 408 IDMGSFGSVYKG-ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-----RHKNLVK 461
I G+FG V K I +G + A + + ASK + + + H N++
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAA--IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 462 ILTVCSGVDYKGDDFKALVY-------EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L C +++G + A+ Y +F+ + E + A+ T L+ Q
Sbjct: 81 LLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST---LSSQQL 134
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
++ A DVA + YL Q H DL N+L+ A +ADFGL++
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 183
Query: 575 IGVKGTIGYIAPAEYGLG----SEVSINGDVYSYGILLLELMT 613
+ VK T+G + + S + N DV+SYG+LL E+++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 408 IDMGSFGSVYKG-ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-----RHKNLVK 461
I G+FG V K I +G + A + + ASK + + + H N++
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAA--IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 462 ILTVCSGVDYKGDDFKALVY-------EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L C +++G + A+ Y +F+ + E + A+ T L+ Q
Sbjct: 91 LLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST---LSSQQL 144
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
++ A DVA + YL Q H DL N+L+ A +ADFGL++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 193
Query: 575 IGVKGTIGYIAPAEYGLG----SEVSINGDVYSYGILLLELMT 613
+ VK T+G + + S + N DV+SYG+LL E+++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V + G+ E + +AVK+L H K ++ +E + ++ +H+N+V +L
Sbjct: 42 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 101
Query: 464 TVCSG-------VDY--KGD--DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFL 512
C+ +Y GD +F E M SL P G DK E + L
Sbjct: 102 GACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP-EGLDK--EDGRPLELR 158
Query: 513 QRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT 572
++ + VA + +L H D+ NVLL + A + DFGLA+ + +
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI----MND 211
Query: 573 SSIGVKGT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
S+ VKG + ++AP E ++ DV+SYGILL E+ +
Sbjct: 212 SNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQ---RINIAIDVACALKYLHHDCQPT 535
L Y F G L L + G D K + F + + +A ++A AL +LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHLH---SLG 146
Query: 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV 595
+ DLKP N+LLD E + DFGL+K + + GT+ Y+AP
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 596 SINGDVYSYGILLLELMT 613
+ D +S+G+L+ E++T
Sbjct: 205 Q-SADWWSFGVLMFEMLT 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS---IAECSALRNIRHKNLVKILT 464
I GSFG+VY ++A+K ++ +++ I E L+ +RH N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ--- 118
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWL---HPVSGADKTVEAPKCLNFLQRINIAIDV 521
Y+G Y H WL + + A +E K LQ + IA
Sbjct: 119 ------YRG------CYLREHTA----WLVMEYCLGSASDLLEVHK--KPLQEVEIAAVT 160
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
AL+ L + H D+K N+LL + DFG A ++ PA+ GT
Sbjct: 161 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTP 214
Query: 582 GYIAPAEYGLGSEVSING--DVYSYGILLLELMTRKRP 617
++AP E +G DV+S GI +EL RK P
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQ---RINIAIDVACALKYLHHDCQPT 535
L Y F G L L + G D K + F + + +A ++A AL +LH
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHLH---SLG 147
Query: 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV 595
+ DLKP N+LLD E + DFGL+K + + GT+ Y+AP
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 205
Query: 596 SINGDVYSYGILLLELMT 613
+ D +S+G+L+ E++T
Sbjct: 206 Q-SADWWSFGVLMFEMLT 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVK--VLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G+FG V+K + +A+K ++ G +++ E L+ ++H+N+V ++ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
C + K LV++F H ++G V L+ ++R+ +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQML--L 135
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTI 581
L Y+H + H D+K +NVL+ + +ADFGLA+ A + Q + +
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 582 GYIAPAEYGLGS-EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632
+ P E LG + D++ G ++ E+ TR S IM +GN H A
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 240
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 29/220 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-AECSALRNIRHKNLVKILTVC--- 466
G FG V++ A+K + L + ++ + E AL + H +V+
Sbjct: 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEK 75
Query: 467 -SGVDYKGDDFKALVY---EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
+ + K +Y + +L++W++ ++ E CL+ I + +A
Sbjct: 76 NTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER-ERSVCLH------IFLQIA 128
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA----------KLLPPAHLQT 572
A+++LH H DLKPSN+ + V DFGL +L P
Sbjct: 129 EAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 573 SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
G GT Y++P + G+ S D++S G++L EL+
Sbjct: 186 RHTGQVGTKLYMSPEQIH-GNSYSHKVDIFSLGLILFELL 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 428 IAVKVLNLLHHGASKSSIAEC-SALRNIRH--KNLVKILTVCSGVD-YKGDDFKALVYEF 483
AVK++ + S + E A R H + + + + +D Y+ F LV++
Sbjct: 122 FAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL 181
Query: 484 MHNGSLEEWL-HPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLK 542
M G L ++L V+ ++K + I + A+ +LH + H DLK
Sbjct: 182 MRKGELFDYLTEKVALSEKETRS-----------IMRSLLEAVSFLHAN---NIVHRDLK 227
Query: 543 PSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---------AEYGLGS 593
P N+LLD M ++DFG + L P + GT GY+AP G G
Sbjct: 228 PENILLDDNMQIRLSDFGFSCHLEPGEKLRE---LCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 594 EVSINGDVYSYGILLLELMT 613
EV D+++ G++L L+
Sbjct: 285 EV----DLWACGVILFTLLA 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 33 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 92
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 93 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 205 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 35 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 94
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 95 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 207 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 496 VSGADKTVEAPKCLNF-LQRINI-AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553
++G D C F L R A ++ L++LH + DLK N+LLD +
Sbjct: 101 LNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGH 157
Query: 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ADFG+ K +T+ GT YIAP E LG + + + D +S+G+LL E++
Sbjct: 158 IKIADFGMCKENMLGDAKTNEFC--GTPDYIAP-EILLGQKYNHSVDWWSFGVLLYEMLI 214
Query: 614 RKRP 617
+ P
Sbjct: 215 GQSP 218
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 38 GCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 97
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ E+ G+L E+L G + + + + + F +
Sbjct: 98 LLGACTQ-----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 210 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRH 456
F FL + GSFG V + + A+K+L ++ + ++ E L +
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN 516
+ L C ++ D V E+++ G L ++ + K E Q +
Sbjct: 79 PPFLTQLHSC----FQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEP-------QAVF 124
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQ--TSS 574
A +++ L +LH + + DLK NV+LD E +ADFG+ K H+ ++
Sbjct: 125 YAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK----EHMMDGVTT 177
Query: 575 IGVKGTIGYIAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
GT YIAP A G V D ++YG+LL E++ + P D
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSV----DWWAYGVLLYEMLAGQPPFD 221
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 35/218 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS---IAECSALRNIRHKNLVKILT 464
I GSFG+VY ++A+K ++ +++ I E L+ +RH N ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ--- 79
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWL---HPVSGADKTVEAPKCLNFLQRINIAIDV 521
Y+G Y H WL + + A +E K LQ + IA
Sbjct: 80 ------YRG------CYLREHTA----WLVMEYCLGSASDLLEVHK--KPLQEVEIAAVT 121
Query: 522 ACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
AL+ L + H D+K N+LL + DFG A ++ PA+ GT
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTP 175
Query: 582 GYIAPAEYGLGSEVSING--DVYSYGILLLELMTRKRP 617
++AP E +G DV+S GI +EL RK P
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQ---RINIAIDVACALKYLHHDCQPT 535
L Y F G L L + G D K + F + + +A ++A L +LH
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALGLDHLH---SLG 150
Query: 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV 595
+ DLKP N+LLD E + DFGL+K + + GT+ Y+AP
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGH- 207
Query: 596 SINGDVYSYGILLLELMTRKRP 617
S + D +SYG+L+ E++T P
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLP 229
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 496 VSGADKTVEAPKCLNF-LQRINI-AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMT 553
++G D C F L R A ++ L++LH + DLK N+LLD +
Sbjct: 100 LNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGH 156
Query: 554 AHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ADFG+ K +T+ GT YIAP E LG + + + D +S+G+LL E++
Sbjct: 157 IKIADFGMCKENMLGDAKTNXFC--GTPDYIAP-EILLGQKYNHSVDWWSFGVLLYEMLI 213
Query: 614 RKRP 617
+ P
Sbjct: 214 GQSP 217
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 139/338 (41%), Gaps = 55/338 (16%)
Query: 386 AAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKV----LNLLHHGAS 441
A I VLV ++ ++ G F ++ + K + A K+ L L H
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 442 KSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADK 501
K S+ E S R++ H+++V ++ +DF +V E SL E LH K
Sbjct: 63 KMSM-EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE-LH---KRRK 112
Query: 502 TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL 561
+ P+ +L++I + +YLH + H DLK N+ L+ ++ + DFGL
Sbjct: 113 ALTEPEARYYLRQIVLGC------QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 562 AKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRPS 618
A + + ++ GT YIAP ++ G EV DV+S G ++ L+ K P
Sbjct: 164 ATKVEYDGERKKTLC--GTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPP- 216
Query: 619 DIMFEGNMNLHNFART-----VLPDHVMDIVDS---TLLADDEDLTITSNQRQRQ----- 665
FE + + R +P H+ + S +L D T N+
Sbjct: 217 ---FETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 273
Query: 666 ----ARINNIMECLISVVRIGVACSMESPQDRMNMTIV 699
AR+ + CL R +A S P +R +T++
Sbjct: 274 GYIPARLP--ITCLTIPPRFSIAPSSLDPSNRKPLTVL 309
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQ---RINIAIDVACALKYLHHDCQPT 535
L Y F G L L + G D K + F + + +A ++A AL +LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALDHLH---SLG 146
Query: 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV 595
+ DLKP N+LLD E + DFGL+K + + GT+ Y+AP
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHT 204
Query: 596 SINGDVYSYGILLLELMT 613
+ D +S+G+L+ E++T
Sbjct: 205 Q-SADWWSFGVLMFEMLT 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVK--VLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
I G+FG V+K + +A+K ++ G +++ E L+ ++H+N+V ++ +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
C + K LV++F H ++G V L+ ++R+ +
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCE--------HDLAGLLSNVLVKFTLSEIKRVMQML--L 134
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA-HLQTSSIGVKGTI 581
L Y+H + H D+K +NVL+ + +ADFGLA+ A + Q + +
Sbjct: 135 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 582 GYIAPAEYGLGS-EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFA 632
+ P E LG + D++ G ++ E+ TR S IM +GN H A
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR---SPIM-QGNTEQHQLA 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG V++ A K + H ++ E + +RH LV +
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA----- 222
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ D+ ++YEFM G L V+ + + + +++++ C K L H
Sbjct: 223 FEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQV-------C--KGLCH 270
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DLKP N++ + + + DFGL L P + S GT + AP E
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVTTGTAEFAAP-E 326
Query: 589 YGLGSEVSINGDVYSYGILLLELMT 613
G V D++S G+L L++
Sbjct: 327 VAEGKPVGYYTDMWSVGVLSYILLS 351
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 57/231 (24%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRN--------IRHKNLVKI 462
G +G V++G+ G+++ AVK+ SS E S R +RH N++
Sbjct: 19 GRYGEVWRGLW-HGESV-AVKIF---------SSRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 463 LTVCSGVDYKGDDFK-ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDV 521
+ S + + + L+ + +GSL ++L +T+E L +A+
Sbjct: 68 --IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALR------LAVSA 114
Query: 522 ACALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTS--- 573
AC L +LH + +P AH D K NVL+ + +AD GLA + H Q S
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM----HSQGSDYL 170
Query: 574 SIGVK---GTIGYIAPAEYGLGSEVSIN-------GDVYSYGILLLELMTR 614
IG GT Y+AP L ++ + D++++G++L E+ R
Sbjct: 171 DIGNNPRVGTKRYMAPEV--LDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG VYK E + A KV+ + I E L H +VK+L
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA----- 76
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPK----CLNFLQRINIAIDVACALK 526
Y D ++ EF G+++ + + D+ + P+ C L+ AL
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLE----------ALN 123
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL-AKLLPPAHLQTSSIGVKGTIGYIA 585
+LH H DLK NVL+ E +ADFG+ AK L + S I GT ++A
Sbjct: 124 FLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMA 177
Query: 586 PA----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E + D++S GI L+E+ + P
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN--IAIDVACALKYLHHDCQPTT 536
L+Y F G L L +SG + ++ + F++ +++ AL +LH Q
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKGI 142
Query: 537 AHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
+ DLKP N++L+H+ + DFGL K H T + GTI Y+AP E + S +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAP-EILMRSGHN 199
Query: 597 INGDVYSYGILLLELMT---------RKRPSDIMFEGNMNL 628
D +S G L+ +++T RK+ D + + +NL
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG VYK E + A KV+ + I E L H +VK+L
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA----- 84
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPK----CLNFLQRINIAIDVACALK 526
Y D ++ EF G+++ + + D+ + P+ C L+ AL
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLE----------ALN 131
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL-AKLLPPAHLQTSSIGVKGTIGYIA 585
+LH H DLK NVL+ E +ADFG+ AK L + S I GT ++A
Sbjct: 132 FLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMA 185
Query: 586 PA----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E + D++S GI L+E+ + P
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG V++ A K + H ++ E + +RH LV +
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA----- 116
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ D+ ++YEFM G L V+ + + + +++++ C K L H
Sbjct: 117 FEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQV-------C--KGLCH 164
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H DLKP N++ + + + DFGL L P + S GT + AP E
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKVTTGTAEFAAP-E 220
Query: 589 YGLGSEVSINGDVYSYGILLLELMT 613
G V D++S G+L L++
Sbjct: 221 VAEGKPVGYYTDMWSVGVLSYILLS 245
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 479 LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN--IAIDVACALKYLHHDCQPTT 536
L+Y F G L L +SG + ++ + F++ +++ AL +LH Q
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKGI 142
Query: 537 AHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
+ DLKP N++L+H+ + DFGL K H T + GTI Y+AP E + S +
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAP-EILMRSGHN 199
Query: 597 INGDVYSYGILLLELMT---------RKRPSDIMFEGNMNL 628
D +S G L+ +++T RK+ D + + +NL
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 89 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 133
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHXVMQEHRKV 186
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ AP + S D + +G+ L E+ T + I G+ LH
Sbjct: 187 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
I G+FG V L + A+K+LN +L + E L N K + +
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
++ D+ LV ++ G L L +S + + +L + IAID
Sbjct: 142 A-----FQDDNNLYLVMDYYVGGDL---LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA-KLLPPAHLQTSSIGVKGTIGY 583
L Y+H D +KP N+L+D +ADFG KL+ +Q SS+ V GT Y
Sbjct: 194 LHYVHRD---------IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-SSVAV-GTPDY 242
Query: 584 IAP----AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
I+P A G D +S G+ + E++ + P
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 93/234 (39%), Gaps = 34/234 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 79 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 123
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHXVMQEHRKV 176
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+ AP + S D + +G+ L E+ T + I G+ LH +
Sbjct: 177 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 93/234 (39%), Gaps = 34/234 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 83 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 127
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHYVMQEHRKV 180
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+ AP + S D + +G+ L E+ T + I G+ LH +
Sbjct: 181 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 32 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 85
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 86 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 126
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 127 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV--- 180
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 181 VTRYYRAP-EVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 232
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTV 465
I G FG V++G G+ + AVK+ + +S E + + RH+N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEV-AVKIFS---SREERSWFREAEIYQTVMLRHENILGFI-- 102
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
D K + LV ++ +GSL ++L+ + TVE I +A+ A
Sbjct: 103 --AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEG--------MIKLALSTA 149
Query: 523 CALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH + +P AH DLK N+L+ T +AD GLA A T +I +
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA---TDTIDI 206
Query: 578 K-----GTIGYIAPAEYGLGSEVSIN---------GDVYSYGILLLELMTR 614
GT Y+AP + SIN D+Y+ G++ E+ R
Sbjct: 207 APNHRVGTKRYMAPEVL----DDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 41/243 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G +G V+ G K +AVKV AS E +RH+N++ +
Sbjct: 45 IGKGRYGEVWMGKWRGEK--VAVKVF-FTTEEASWFRETEIYQTVLMRHENILGFI---- 97
Query: 468 GVDYKGDDFKALVY---EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
D KG +Y ++ NGSL ++L + K++ + +A
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----------LKLAYSSVSG 146
Query: 525 LKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLA-KLLPPAHLQTSSIGVK 578
L +LH + +P AH DLK N+L+ T +AD GLA K + T+ + +
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS----DTNEVDIP 202
Query: 579 -----GTIGYIAPA--EYGLGS---EVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628
GT Y+ P + L + I D+YS+G++L E+ R I+ E +
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
Query: 629 HNF 631
H+
Sbjct: 263 HDL 265
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTV 465
I G FG V++G G+ + AVK+ + +S E + + RH+N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEV-AVKIFS---SREERSWFREAEIYQTVMLRHENILGFI-- 89
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
D K + LV ++ +GSL ++L+ + TVE I +A+ A
Sbjct: 90 --AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGM--------IKLALSTA 136
Query: 523 CALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH + +P AH DLK N+L+ T +AD GLA A T +I +
Sbjct: 137 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA---TDTIDI 193
Query: 578 K-----GTIGYIAPAEYGLGSEVSIN---------GDVYSYGILLLELMTR 614
GT Y+AP + SIN D+Y+ G++ E+ R
Sbjct: 194 APNHRVGTKRYMAPEVL----DDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSAL-RNIRH 456
F FL I GSFG V + AVKVL +L K ++E + L +N++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN 516
LV + ++ D V ++++ G L + H ++ +C +
Sbjct: 99 PFLVGL-----HFSFQTADKLYFVLDYINGGEL--FYH--------LQRERCFLEPRARF 143
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
A ++A AL YLH + DLKP N+LLD + + DFGL K + TS+
Sbjct: 144 YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFC 200
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
GT Y+AP E D + G +L E++
Sbjct: 201 --GTPEYLAP-EVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 43 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 96
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 97 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 137
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + +
Sbjct: 138 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 194
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 195 ----YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG VYK E + A KV++ + + E L + H N+VK+L
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF---- 103
Query: 471 YKGDDFKALVYEFMHNGSLE----EWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
Y ++ L+ EF G+++ E P++ + V + L+ AL
Sbjct: 104 YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-------------ALN 149
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL-AKLLPPAHLQTSSIGVKGTIGYIA 585
YLH + H DLK N+L + +ADFG+ AK + I GT ++A
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI---GTPYWMA 203
Query: 586 PA----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
P E DV+S GI L+E+ + P
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P D + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 89 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 133
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 134 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHYVMQEHRKV 186
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ AP + S D + +G+ L E+ T + I G+ LH
Sbjct: 187 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 236
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTV 465
I G FG V++G G+ + AVK+ + +S E + + RH+N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEV-AVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFI-- 69
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
D K + LV ++ +GSL ++L+ + TVE I +A+ A
Sbjct: 70 --AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGM--------IKLALSTA 116
Query: 523 CALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH + +P AH DLK N+L+ T +AD GLA A T +I +
Sbjct: 117 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA---TDTIDI 173
Query: 578 K-----GTIGYIAPAEYGLGSEVSIN---------GDVYSYGILLLELMTR 614
GT Y+AP + SIN D+Y+ G++ E+ R
Sbjct: 174 APNHRVGTKRYMAPEVL----DDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 24/214 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA-SKSSIAECSALRNIRHKNLVKILTVCSGV 469
G++G V I+A+K + + ++ E L++ +H+N++ I +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
++ + ++ E M LH V + Q + A+K LH
Sbjct: 82 SFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR-------AVKVLH 129
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL--------PPAHLQTSSIGVKGTI 581
H DLKPSN+L++ V DFGLA+++ P Q+ + T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
Y AP ++ S DV+S G +L EL R+
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 79 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 123
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHYVMQEHRKV 176
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ AP + S D + +G+ L E+ T + I G+ LH
Sbjct: 177 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 226
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTV 465
I G FG V++G G+ + AVK+ + +S E + + RH+N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEV-AVKIFS---SREERSWFREAEIYQTVMLRHENILGFI-- 63
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
D K + LV ++ +GSL ++L+ + TVE I +A+ A
Sbjct: 64 --AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGM--------IKLALSTA 110
Query: 523 CALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH + +P AH DLK N+L+ T +AD GLA A T +I +
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA---TDTIDI 167
Query: 578 K-----GTIGYIAPAEYGLGSEVSIN---------GDVYSYGILLLELMTR 614
GT Y+AP + SIN D+Y+ G++ E+ R
Sbjct: 168 APNHRVGTKRYMAPEVL----DDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTV 465
I G FG V++G G+ + AVK+ + +S E + + RH+N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEV-AVKIFS---SREERSWFREAEIYQTVMLRHENILGFI-- 64
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
D K + LV ++ +GSL ++L+ + TVE I +A+ A
Sbjct: 65 --AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGM--------IKLALSTA 111
Query: 523 CALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH + +P AH DLK N+L+ T +AD GLA A T +I +
Sbjct: 112 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA---TDTIDI 168
Query: 578 K-----GTIGYIAPAEYGLGSEVSIN---------GDVYSYGILLLELMTR 614
GT Y+AP + SIN D+Y+ G++ E+ R
Sbjct: 169 APNHRVGTKRYMAPEVL----DDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 51/231 (22%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTV 465
I G FG V++G G+ + AVK+ + +S E + + RH+N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEV-AVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFI-- 66
Query: 466 CSGVDYKGDDFKA---LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
D K + LV ++ +GSL ++L+ + TVE I +A+ A
Sbjct: 67 --AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT---VTVEGM--------IKLALSTA 113
Query: 523 CALKYLHHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
L +LH + +P AH DLK N+L+ T +AD GLA A T +I +
Sbjct: 114 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA---TDTIDI 170
Query: 578 K-----GTIGYIAPAEYGLGSEVSIN---------GDVYSYGILLLELMTR 614
GT Y+AP + SIN D+Y+ G++ E+ R
Sbjct: 171 APNHRVGTKRYMAPEVL----DDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 92/231 (39%), Gaps = 34/231 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 83 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 127
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 128 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHYVMQEHRKV 180
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ AP + S D + +G+ L E+ T + I G+ LH
Sbjct: 181 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHK 230
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ + G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 93/234 (39%), Gaps = 34/234 (14%)
Query: 411 GSFGSVYKGILD--EGKTI-IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V +G D GKT+ +AVK L L A I E +A+ ++ H+NL+++
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
V K +V E GSL + L G L L R A+ VA
Sbjct: 79 VVLTPPMK------MVTELAPLGSLLDRLRKHQGH-------FLLGTLSRY--AVQVAEG 123
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV-----KG 579
+ YL H DL N+LL + DFGL + LP Q V K
Sbjct: 124 MGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP----QNDDHYVMQEHRKV 176
Query: 580 TIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+ AP + S D + +G+ L E+ T + I G+ LH +
Sbjct: 177 PFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 26/169 (15%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E S L+++ H N++K+ V ++ + LV EF G L E + D+ A
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA- 149
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAK 563
NI + + YLH + H D+KP N+LL+++ + + DFGL+
Sbjct: 150 ---------NIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ + GT YIAP L + + DV+S G+++ L+
Sbjct: 198 FFSKDYKLRDRL---GTAYYIAPE--VLKKKYNEKCDVWSCGVIMYILL 241
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L + + L +++IA V L YL Q
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEI--------LGKVSIA--VLRGLAYLREKHQ--IM 137
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y+AP E G+ S+
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMAP-ERLQGTHYSV 192
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+EL + P
Sbjct: 193 QSDIWSMGLSLVELAVGRYP 212
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 408 IDMGSFGSVYKG-ILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI-----RHKNLVK 461
I G+FG V K I +G + A + + ASK + + + H N++
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAA--IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 462 ILTVCSGVDYKGDDFKALVY-------EFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
+L C +++G + A+ Y +F+ + E + A+ T L+ Q
Sbjct: 88 LLGAC---EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST---LSSQQL 141
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
++ A DVA + YL Q H +L N+L+ A +ADFGL++
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR--------GQE 190
Query: 575 IGVKGTIGYIAPAEYGLG----SEVSINGDVYSYGILLLELMT 613
+ VK T+G + + S + N DV+SYG+LL E+++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 71
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 72 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 120
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 121 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P D + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P D + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P D + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
IA+ + AL++LH + H D+KPSNVL++ + DFG++ L + +T
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 576 GVKGTIGYIAPAEYGLGSEV-----SINGDVYSYGILLLELMTRKRPSD 619
G K Y+AP + E+ S+ D++S GI ++EL + P D
Sbjct: 215 GCK---PYMAPER--INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR 189
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 190 ----YYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 501 KTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560
K ++ P L ++ +AI AL YL + H D+KPSN+LLD + DFG
Sbjct: 115 KRMQGPIPERILGKMTVAI--VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFG 170
Query: 561 LAKLLPPAHLQTSSIGVKGTIGYIAPAEYG----LGSEVSINGDVYSYGILLLELMTRKR 616
++ L + S G Y+AP + I DV+S GI L+EL T +
Sbjct: 171 ISGRLVDDKAKDRSAGC---AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQF 227
Query: 617 P 617
P
Sbjct: 228 P 228
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G++GSV I +A+K L+ +K + E L++++H+N++ +L V +
Sbjct: 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 112
Query: 469 VDYKGD--DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ DF LV FM L + G + + E + L + + LK
Sbjct: 113 ASSLRNFYDF-YLVMPFMQTD-----LQKIMGMEFSEEKIQYLVY--------QMLKGLK 158
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y+H H DLKP N+ ++ + + DFGLA+ H G T Y AP
Sbjct: 159 YIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAP 210
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625
+ D++S G ++ E++T K +F+G
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGK----TLFKGK 245
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I GS G V + ++AVK ++L + E +R+ +H+N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 93
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V EF+ G+L + + ++ + A CL LQ AL
Sbjct: 94 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQ----------ALSV 140
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGY 583
LH H D+K ++LL H+ ++DFG ++K +P + GT +
Sbjct: 141 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYW 191
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+AP + G EV D++S GI+++E++ + P
Sbjct: 192 MAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I GS G V + ++AVK ++L + E +R+ +H+N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 138
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V EF+ G+L + + ++ + A CL LQ AL
Sbjct: 139 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQ----------ALSV 185
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGY 583
LH H D+K ++LL H+ ++DFG ++K +P + GT +
Sbjct: 186 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYW 236
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+AP + G EV D++S GI+++E++ + P
Sbjct: 237 MAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 269
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 32/239 (13%)
Query: 386 AAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKV----LNLLHHGAS 441
A I VLV ++ ++ G F ++ + K + A K+ L L H
Sbjct: 3 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 62
Query: 442 KSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADK 501
K S+ E S R++ H+++V ++ +DF +V E SL E LH K
Sbjct: 63 KMSM-EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE-LH---KRRK 112
Query: 502 TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL 561
+ P+ +L++I + +YLH + H DLK N+ L+ ++ + DFGL
Sbjct: 113 ALTEPEARYYLRQIVLGC------QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 163
Query: 562 AKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
A + + ++ GT YIAP ++ G EV DV+S G ++ L+ K P
Sbjct: 164 ATKVEYDGERKKTLC--GTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEV--- 186
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 187 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 73
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P D + P F ++ + YLH
Sbjct: 74 RREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVYLH 122
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I GS G V + ++AVK ++L + E +R+ +H+N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 95
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V EF+ G+L + + ++ + A CL LQ AL
Sbjct: 96 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQ----------ALSV 142
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGY 583
LH H D+K ++LL H+ ++DFG ++K +P + GT +
Sbjct: 143 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYW 193
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+AP + G EV D++S GI+++E++ + P
Sbjct: 194 MAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I GS G V + ++AVK ++L + E +R+ +H+N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 84
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V EF+ G+L + + ++ + A CL LQ AL
Sbjct: 85 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQ----------ALSV 131
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGY 583
LH H D+K ++LL H+ ++DFG ++K +P + GT +
Sbjct: 132 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYW 182
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+AP + G EV D++S GI+++E++ + P
Sbjct: 183 MAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 131/317 (41%), Gaps = 55/317 (17%)
Query: 407 WIDMGSFGSVYKGILDEGKTIIAVKV----LNLLHHGASKSSIAECSALRNIRHKNLVKI 462
++ G F ++ + K + A K+ L L H K S+ E S R++ H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 106
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
++ +DF +V E SL E LH K + P+ +L++I +
Sbjct: 107 HGF-----FEDNDFVFVVLELCRRRSLLE-LH---KRRKALTEPEARYYLRQIVLGC--- 154
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+YLH + H DLK N+ L+ ++ + DFGLA + + + GT
Sbjct: 155 ---QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPN 206
Query: 583 YIAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART----- 634
YIAP ++ G EV DV+S G ++ L+ K P FE + + R
Sbjct: 207 YIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEY 258
Query: 635 VLPDHVMDIVDS---TLLADDEDLTITSNQRQRQ---------ARINNIMECLISVVRIG 682
+P H+ + S +L D T N+ AR+ + CL R
Sbjct: 259 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP--ITCLTIPPRFS 316
Query: 683 VACSMESPQDRMNMTIV 699
+A S P +R +T++
Sbjct: 317 IAPSSLDPSNRKPLTVL 333
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 24/218 (11%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKV-LNLLHHGASKSS----IAECSALRNI-RHKNLVK 461
G+FG V +D+ K AV V + +L A++ ++E ++ I +HKN++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS--GADKTVEAPKC----LNFLQRI 515
+L C+ D ++ + G+L E+L G + + + + + F +
Sbjct: 106 LLGACTQ-----DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ +A ++YL H DL NVL+ +ADFGLA+ + +
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E + DV+S+G+L+ E+ T
Sbjct: 218 NGRLPVKWMAP-EALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G++G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P D + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGAS----KSSIAECSALRNIRHKNLVKILTVC 466
G++G+V + +G+T V + L S K + E L+++RH+N++ +L V
Sbjct: 36 GAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVF 93
Query: 467 SGVDYKGDDFK--ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
+ D DDF LV FM + H G D+ + FL +
Sbjct: 94 TP-DETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR-------IQFL-----VYQMLKG 140
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYI 584
L+Y+H H DLKP N+ ++ + + DFGLA+ + G T Y
Sbjct: 141 LRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYR 192
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNL 628
AP + D++S G ++ E++T K +F+G+ +L
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGK----TLFKGSDHL 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHH--GASKSSIAECSALRNIRHKNLVKILTVCSG 468
G++G VYK I +A+K + L H G ++I E S L+ ++H+N++++ +V
Sbjct: 45 GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-- 102
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ L++E+ N L++++ D ++ K +FL ++ ++ + + L
Sbjct: 103 ---HHNHRLHLIFEYAEN-DLKKYMD--KNPDVSMRVIK--SFLYQLINGVNFCHSRRCL 154
Query: 529 HHDCQPTTAHCDLKPSNVLL---DHEMTA--HVADFGLAKLLP-PAHLQTSSIGVKGTIG 582
H DLKP N+LL D T + DFGLA+ P T I T+
Sbjct: 155 HR---------DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI---ITLW 202
Query: 583 YIAPAEYGLGSE-VSINGDVYSYGILLLELMTR 614
Y P E LGS S + D++S + E++ +
Sbjct: 203 Y-RPPEILLGSRHYSTSVDIWSIACIWAEMLMK 234
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 131/317 (41%), Gaps = 55/317 (17%)
Query: 407 WIDMGSFGSVYKGILDEGKTIIAVKV----LNLLHHGASKSSIAECSALRNIRHKNLVKI 462
++ G F ++ + K + A K+ L L H K S+ E S R++ H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSM-EISIHRSLAHQHVVGF 104
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
++ +DF +V E SL E LH K + P+ +L++I +
Sbjct: 105 HGF-----FEDNDFVFVVLELCRRRSLLE-LH---KRRKALTEPEARYYLRQIVLGC--- 152
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+YLH + H DLK N+ L+ ++ + DFGLA + + + GT
Sbjct: 153 ---QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPN 204
Query: 583 YIAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFART----- 634
YIAP ++ G EV DV+S G ++ L+ K P FE + + R
Sbjct: 205 YIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEY 256
Query: 635 VLPDHVMDIVDS---TLLADDEDLTITSNQRQRQ---------ARINNIMECLISVVRIG 682
+P H+ + S +L D T N+ AR+ + CL R
Sbjct: 257 SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP--ITCLTIPPRFS 314
Query: 683 VACSMESPQDRMNMTIV 699
+A S P +R +T++
Sbjct: 315 IAPSSLDPSNRKPLTVL 331
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA----------KL 564
++I I +A A+++LH H DLKPSN+ + V DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 565 LPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
L P + G GT Y++P + G+ S D++S G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIH-GNNYSHKVDIFSLGLILFELL 270
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I GS G V + ++AVK ++L + E +R+ +H+N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 215
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V EF+ G+L + + ++ + A CL LQ AL
Sbjct: 216 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQ----------ALSV 262
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGY 583
LH H D+K ++LL H+ ++DFG ++K +P + GT +
Sbjct: 263 LHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYW 313
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+AP + G EV D++S GI+++E++ + P
Sbjct: 314 MAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 346
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 45/220 (20%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK L+ + +K + E L+ + HKN++ +L V F
Sbjct: 50 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV-----------------FTP 92
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VACALKYLHHDCQPT 535
+LEE V + ++A N Q I++ +D + C +K+LH
Sbjct: 93 QKTLEE-FQDVYLVMELMDA----NLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAG 144
Query: 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV 595
H DLKPSN+++ + T + DFGLA+ + T + + Y AP E LG
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR---YYRAP-EVILGMGY 200
Query: 596 SINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
N D++S G ++ EL+ ++F+G ++ + + +
Sbjct: 201 KENVDIWSVGCIMGELVK----GSVIFQGTDHIDQWNKVI 236
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I GS G V + ++AVK ++L + E +R+ +H+N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 88
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
Y D +V EF+ G+L + + ++ + A CL LQ AL
Sbjct: 89 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA-VCLAVLQ----------ALSV 135
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGY 583
LH H D+K ++LL H+ ++DFG ++K +P + GT +
Sbjct: 136 LHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYW 186
Query: 584 IAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+AP + G EV D++S GI+++E++ + P
Sbjct: 187 MAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPP 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 45/220 (20%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK L+ + +K + E L+ + HKN++ +L V F
Sbjct: 52 VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV-----------------FTP 94
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VACALKYLHHDCQPT 535
+LEE V + ++A N Q I++ +D + C +K+LH
Sbjct: 95 QKTLEE-FQDVYLVMELMDA----NLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAG 146
Query: 536 TAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEV 595
H DLKPSN+++ + T + DFGLA+ + T + + Y AP E LG
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTR---YYRAP-EVILGMGY 202
Query: 596 SINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
+ N D++S G ++ EL+ ++F+G ++ + + +
Sbjct: 203 AANVDIWSVGCIMGELVK----GCVIFQGTDHIDQWNKVI 238
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 43/230 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSI----AECSALRNIRHKNLVK 461
G FG V K G T +AVK +L AS S + +E + L+ + H +++K
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVK---MLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA------------DKTVEAP--K 507
+ CS D L+ E+ GSL +L +++ P +
Sbjct: 91 LYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 508 CLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPP 567
L I+ A ++ ++YL + + H DL N+L+ ++DFGL++
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR---- 198
Query: 568 AHLQTSSIGVKGTIGYIAPAEYGLGSE----VSINGDVYSYGILLLELMT 613
+ VK + G I + S + DV+S+G+LL E++T
Sbjct: 199 -DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F +LEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKTLEE-FQDVYLVMELMDA----NLXQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 XGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 238
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 190 ----YYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V + G+ E + +AVK+L H K ++ +E + ++ +H+N+V +L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKT----VEAPKCLNFLQRINIAI 519
C+ + G ++ E+ G L +L S +T A L+ ++ +
Sbjct: 117 GACT---HGGPVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
VA + +L H D+ NVLL + A + DFGLA+ + + S+ VKG
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSNYIVKG 224
Query: 580 T----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP E ++ DV+SYGILL E+ +
Sbjct: 225 NARLPVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 39 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 92
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 93 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 133
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + +
Sbjct: 134 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 191 ----YYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 22/231 (9%)
Query: 389 IISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIA 446
I VLV ++ ++ G F Y+ + K + A KV+ ++L K ++
Sbjct: 31 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
A+ HK+L V ++ DDF +V E SL E LH K V P
Sbjct: 91 TEIAI----HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVTEP 142
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP 566
+ F+++ ++YLH++ H DLK N+ L+ +M + DFGLA +
Sbjct: 143 EARYFMRQ------TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 567 PAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ ++ GT YIAP E S D++S G +L L+ K P
Sbjct: 194 FDGERKKTLC--GTPNYIAP-EVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 389 IISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIA 446
I VLV ++ ++ G F Y+ + K + A KV+ ++L K ++
Sbjct: 15 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 74
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
A+ HK+L V ++ DDF +V E SL E LH K V P
Sbjct: 75 TEIAI----HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVTEP 126
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP 566
+ F+++ ++YLH++ H DLK N+ L+ +M + DFGLA +
Sbjct: 127 EARYFMRQ------TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 177
Query: 567 PAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ + GT YIAP E S D++S G +L L+ K P
Sbjct: 178 FDGERKKDLC--GTPNYIAP-EVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 32/209 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
GS+G V K + I+A+K + K ++ E L+ +RH+NLV +L VC
Sbjct: 36 GSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-- 93
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
K LV+EF+ + L++ +G D V +Q+ I +
Sbjct: 94 ---KKKKRWYLVFEFVDHTILDDLELFPNGLDYQV--------VQKYLFQIINGIGFCHS 142
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGYIAP- 586
H H D+KP N+L+ + DFG A+ L P + + T Y AP
Sbjct: 143 H-----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV---ATRWYRAPE 194
Query: 587 ---AEYGLGSEVSINGDVYSYGILLLELM 612
+ G V DV++ G L+ E+
Sbjct: 195 LLVGDVKYGKAV----DVWAIGCLVTEMF 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAE---CSALRNIRHKNLVKILTVCS 467
G++G V + + +AVK++++ +I + +A+ N H+N+VK
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLN--HENVVKFY---- 71
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
G +G+ + L E+ G L + + P D + P F ++ + Y
Sbjct: 72 GHRREGN-IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQL------MAGVVY 120
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPA 587
LH H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEV--- 186
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 187 VTRYYRAP-EVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDYIDQWNKVI 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 60/234 (25%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V + G+ E + +AVK+L H K ++ +E + ++ +H+N+V +L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--------- 514
C+ H G PV + LNFL+R
Sbjct: 117 GACT-----------------HGG-------PVLVITEYCCYGDLLNFLRRKSRVLETDP 152
Query: 515 -INIAIDVACALKYLHHDCQPTTA----------HCDLKPSNVLLDHEMTAHVADFGLAK 563
IA A LH Q H D+ NVLL + A + DFGLA+
Sbjct: 153 AFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 564 LLPPAHLQTSSIGVKGT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + S+ VKG + ++AP E ++ DV+SYGILL E+ +
Sbjct: 213 DI----MNDSNYIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F SLEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + +
Sbjct: 133 YQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 190 ----YYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 24/214 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA-SKSSIAECSALRNIRHKNLVKILTVCSGV 469
G++G V I+A+K + + ++ E L++ +H+N++ I +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
++ + ++ E M LH V + Q + A+K LH
Sbjct: 82 SFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR-------AVKVLH 129
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL--------PPAHLQTSSIGVKGTI 581
H DLKPSN+L++ V DFGLA+++ P Q+ T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
Y AP ++ S DV+S G +L EL R+
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 441 SKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGAD 500
+K ++ E L++ +H N++ I + G+ FK+ VY + +E LH + +
Sbjct: 97 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE-FKS-VYVVL--DLMESDLHQIIHSS 152
Query: 501 KTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560
+ + FL ++ LKY+H H DLKPSN+L++ + DFG
Sbjct: 153 QPLTLEHVRYFLYQL------LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFG 203
Query: 561 LAKLL--PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPS 618
+A+ L PA Q T Y AP E + D++S G + E++ R++
Sbjct: 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-- 261
Query: 619 DIMFEGNMNLHNF 631
+F G +H
Sbjct: 262 --LFPGKNYVHQL 272
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 24/214 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA-SKSSIAECSALRNIRHKNLVKILTVCSGV 469
G++G V I+A+K + + ++ E L++ +H+N++ I +
Sbjct: 22 GAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD 81
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
++ + ++ E M LH V + Q + A+K LH
Sbjct: 82 SFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR-------AVKVLH 129
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL--------PPAHLQTSSIGVKGTI 581
H DLKPSN+L++ V DFGLA+++ P Q+ T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
Y AP ++ S DV+S G +L EL R+
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 389 IISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIA 446
I VLV ++ ++ G F Y+ + K + A KV+ ++L K ++
Sbjct: 31 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
A+ HK+L V ++ DDF +V E SL E LH K V P
Sbjct: 91 TEIAI----HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVTEP 142
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP 566
+ F+++ ++YLH++ H DLK N+ L+ +M + DFGLA +
Sbjct: 143 EARYFMRQ------TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 567 PAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ + GT YIAP E S D++S G +L L+ K P
Sbjct: 194 FDGERKKDLC--GTPNYIAP-EVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 43/230 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSI----AECSALRNIRHKNLVK 461
G FG V K G T +AVK +L AS S + +E + L+ + H +++K
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVK---MLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA------------DKTVEAP--K 507
+ CS D L+ E+ GSL +L +++ P +
Sbjct: 91 LYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 508 CLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPP 567
L I+ A ++ ++YL + H DL N+L+ ++DFGL++
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR---- 198
Query: 568 AHLQTSSIGVKGTIGYIAPAEYGLGSE----VSINGDVYSYGILLLELMT 613
+ VK + G I + S + DV+S+G+LL E++T
Sbjct: 199 -DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 31 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 84
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 85 --------------FTPQKTLEE-FQDVYLVMELMDA----NLXQVIQMELDHERMSYLL 125
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 126 YQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV--- 179
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 180 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 231
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSG 468
G + Y +LD +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 38 GIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV--- 91
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID-------- 520
F +LEE V + ++A N Q I + +D
Sbjct: 92 --------------FTPQKTLEE-FQDVYLVMELMDA----NLXQVIQMELDHERMSYLL 132
Query: 521 --VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
+ +K+LH H DLKPSN+++ + T + DFGLA+ + + T +
Sbjct: 133 YQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYV--- 186
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
T Y AP E LG N D++S G ++ E++ K I+F G + + + +
Sbjct: 187 VTRYYRAP-EVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQWNKVI 238
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKSLEE-FQDVYIVMELMDA----NLSQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 30/219 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTVCSG 468
G++GSV I +A+K L+ +K + E L++++H+N++ +L V +
Sbjct: 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 94
Query: 469 VDYKGD--DFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+ DF LV FM L + G + E + L + + LK
Sbjct: 95 ASSLRNFYDF-YLVMPFMQTD-----LQKIMGLKFSEEKIQYLVY--------QMLKGLK 140
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y+H H DLKP N+ ++ + + DFGLA+ H G T Y AP
Sbjct: 141 YIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAP 192
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625
+ D++S G ++ E++T K +F+G
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK----TLFKGK 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKSLEE-FQDVYIVMELMDA----NLSQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 94
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 95 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 135
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 187
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 389 IISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVL--NLLHHGASKSSIA 446
I VLV ++ ++ G F Y+ + K + A KV+ ++L K ++
Sbjct: 31 IPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS 90
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
A+ HK+L V ++ DDF +V E SL E LH K V P
Sbjct: 91 TEIAI----HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LH---KRRKAVTEP 142
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP 566
+ F+++ ++YLH++ H DLK N+ L+ +M + DFGLA +
Sbjct: 143 EARYFMRQ------TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE 193
Query: 567 PAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ + GT YIAP E S D++S G +L L+ K P
Sbjct: 194 FDGERKKXLC--GTPNYIAP-EVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 100
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 101 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 141
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 142 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 193
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 441 SKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGAD 500
+K ++ E L++ +H N++ I + G+ FK+ VY + +E LH + +
Sbjct: 98 AKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE-FKS-VYVVL--DLMESDLHQIIHSS 153
Query: 501 KTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFG 560
+ + FL ++ LKY+H H DLKPSN+L++ + DFG
Sbjct: 154 QPLTLEHVRYFLYQL------LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFG 204
Query: 561 LAKLL--PPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPS 618
+A+ L PA Q T Y AP E + D++S G + E++ R++
Sbjct: 205 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ-- 262
Query: 619 DIMFEGNMNLHNF 631
+F G +H
Sbjct: 263 --LFPGKNYVHQL 273
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 34/253 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+FG V + + I A+K+LN K + + + R + V + C
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILN-------KWEMLKRAETACFREERDVLVNGDCQ 150
Query: 468 GVD-----YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
+ ++ ++ LV ++ G L L +S + + ++ + +AID
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDL---LTLLSKFEDKLPEDMARFYIGEMVLAIDSI 207
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
L Y+H D +KP NVLLD +ADFG + SS+ V GT
Sbjct: 208 HQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPD 257
Query: 583 YIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP--SDIMFEGNMNLHNF-ART 634
YI+P E G+G + D +S G+ + E++ + P ++ + E + N R
Sbjct: 258 YISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 316
Query: 635 VLPDHVMDIVDST 647
P HV D+ +
Sbjct: 317 QFPSHVTDVSEEA 329
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 94
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 95 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 135
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGY 187
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKSLEE-FQDVYIVMELMDA----NLSQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
C +K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 43/230 (18%)
Query: 411 GSFGSVYKGIL-----DEGKTIIAVKVLNLLHHGASKSSI----AECSALRNIRHKNLVK 461
G FG V K G T +AVK +L AS S + +E + L+ + H +++K
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVK---MLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 462 ILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA------------DKTVEAP--K 507
+ CS D L+ E+ GSL +L +++ P +
Sbjct: 91 LYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 508 CLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPP 567
L I+ A ++ ++YL + H DL N+L+ ++DFGL++
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR---- 198
Query: 568 AHLQTSSIGVKGTIGYIAPAEYGLGSE----VSINGDVYSYGILLLELMT 613
+ VK + G I + S + DV+S+G+LL E++T
Sbjct: 199 -DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGA--SKSSIAECSALRNIRHKNLVKILTV 465
I GS+G V+K + I+A+K K ++ E L+ ++H NLV +L V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
++ LV+E+ + L E G + + LQ +N
Sbjct: 71 -----FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK----- 120
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP-PAHLQTSSIGVKGTIGYI 584
H+C H D+KP N+L+ + DFG A+LL P+ + T Y
Sbjct: 121 ----HNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV---ATRWYR 169
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMT 613
+P ++ DV++ G + EL++
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 32/239 (13%)
Query: 386 AAAIISVLVGILLFVSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKV----LNLLHHGAS 441
A I VLV ++ ++ G F ++ + K + A K+ L L H
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 442 KSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADK 501
K S+ E S R++ H+++V ++ +DF +V E SL E LH K
Sbjct: 61 KMSM-EISIHRSLAHQHVVGFHGF-----FEDNDFVFVVLELCRRRSLLE-LH---KRRK 110
Query: 502 TVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL 561
+ P+ +L++I + +YLH + H DLK N+ L+ ++ + DFGL
Sbjct: 111 ALTEPEARYYLRQIVLGC------QYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGL 161
Query: 562 AKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
A + + + GT YIAP ++ G EV DV+S G ++ L+ K P
Sbjct: 162 ATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFEV----DVWSIGCIMYTLLVGKPP 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK+++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 43 VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLVMEYAS 97
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 98 GGEVFDYL-VAHGRMKEKEAR--AKFRQ-------IVSAVQYCH---QKYIVHRDLKAEN 144
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + ++G K G+ Y AP + D
Sbjct: 145 LLLDGDMNIKIADFGFSNEF--------TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK+++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVMEYAS 96
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARA--KFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 143
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + + G K G+ Y AP + D
Sbjct: 144 LLLDADMNIKIADFGFSNEF--------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 104/249 (41%), Gaps = 34/249 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G+FG V + + I A+K+LN K + + + R + V + C
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILN-------KWEMLKRAETACFREERDVLVNGDCQ 134
Query: 468 GVD-----YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVA 522
+ ++ ++ LV ++ G L L +S + + ++ + +AID
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDL---LTLLSKFEDKLPEDMARFYIGEMVLAIDSI 191
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
L Y+H D +KP NVLLD +ADFG + SS+ V GT
Sbjct: 192 HQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV-GTPD 241
Query: 583 YIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP--SDIMFEGNMNLHNF-ART 634
YI+P E G+G + D +S G+ + E++ + P ++ + E + N R
Sbjct: 242 YISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 635 VLPDHVMDI 643
P HV D+
Sbjct: 301 QFPSHVTDV 309
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + IAVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 62 GAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 118
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 119 -----------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 159
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 160 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 211
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP ++ D++S G ++ EL+T
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 99 SICMEHMDGGSLDQVL------KKAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 146
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 201
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 202 QSDIWSMGLSLVEMAVGRYP 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK+++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVMEYAS 89
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 90 GGEVFDYL-VAHGWMKEKEARA--KFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 136
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + + G K G+ Y AP + D
Sbjct: 137 LLLDADMNIKIADFGFS--------NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 189 VWSLGVILYTLVSGSLPFD 207
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 86 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 126
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 178
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK+++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVMEYAS 96
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARA--KFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 143
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + + G K G+ Y AP + D
Sbjct: 144 LLLDADMNIKIADFGFSNEF--------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 131/327 (40%), Gaps = 49/327 (14%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKT---IIAVKVLNLLHHGASKSSIA-ECSALRNIRHK 457
F F + G+F V +L E K + AVK + +SSI E + LR I+H+
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+V + + Y+ + LV + + G L + + +K K + L R
Sbjct: 81 NIVALEDI-----YESPNHLYLVMQLVSGGELFDRI-----VEKGFYTEKDASTLIR--- 127
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAKLLPPAHLQTSS 574
V A+ YLH + H DLKP N+L D E ++DFGL+K+ + +++
Sbjct: 128 --QVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA 182
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP-----SDIMFEGNMNLH 629
GT GY+AP E S D +S G++ L+ P +FE +
Sbjct: 183 C---GTPGYVAP-EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAE 238
Query: 630 NFARTVLPDHVMDIVDS---TLLADDEDLTITSNQRQRQARI-------NNIMECLISVV 679
+ D + D L+ D + T Q R I NI E + + +
Sbjct: 239 YEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALNKNIHESVSAQI 298
Query: 680 RIGVACSMESPQDRMNMTIVVHELQSI 706
R A S + N T VV ++ +
Sbjct: 299 RKNFAKS--KWRQAFNATAVVRHMRKL 323
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 86
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 87 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 127
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 128 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 179
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 96 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 136
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGY 188
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 31 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 88 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 128
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 129 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 180
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 92 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 132
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 36/223 (16%)
Query: 411 GSFGSVYK----GILDEGKTI-IAVKVLNLLHHGASKSSI-AECSALRNI-RHKNLVKIL 463
G+FG V + G+ E + +AVK+L H K ++ +E + ++ +H+N+V +L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 464 TVCSG-------VDY--KGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR 514
C+ +Y GD L + LE +P ++ + + L+F
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRK--RPPGLEYSYNPSHNPEEQLSSRDLLHF--- 171
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
+ VA + +L H D+ NVLL + A + DFGLA+ + + S+
Sbjct: 172 ---SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI----MNDSN 221
Query: 575 IGVKGT----IGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
VKG + ++AP E ++ DV+SYGILL E+ +
Sbjct: 222 YIVKGNARLPVKWMAP-ESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 94
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 95 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 135
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 187
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGV 469
G+ G V + + +AVK++++ +I E + + H+N+VK G
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY----GH 72
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+G+ + L E+ G L + + P G + P F ++ + YLH
Sbjct: 73 RREGN-IQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQL------MAGVVYLH 121
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD ++DFGLA + + + + GT+ Y+AP
Sbjct: 122 ---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 590 GLGSEVSINGDVYSYGILLLELMTRKRPSD 619
+ DV+S GI+L ++ + P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 32 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 88
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 89 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 129
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 130 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 181
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 92 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 132
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 112
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 113 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 153
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 154 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGY 205
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 92 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 132
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGY 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 53 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 109
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 110 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 150
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 151 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 202
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSE--- 594
H D+KPSN+LLD + DFG++ L + +T G + Y+AP +
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCR---PYMAPERIDPSASRQG 205
Query: 595 VSINGDVYSYGILLLELMTRKRP 617
+ DV+S GI L EL T + P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 43 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 99
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 100 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 140
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 141 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 192
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 101
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 102 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 142
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 143 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 194
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 96
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 97 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 137
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 189
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 101
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 102 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 142
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 143 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 194
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 100
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 101 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 141
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 142 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 193
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 39/245 (15%)
Query: 428 IAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNG 487
+AVK ++L + E +R+ H N+V + + Y D +V EF+ G
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS-----SYLVGDELWVVMEFLEGG 127
Query: 488 SLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVL 547
+L + + ++ + A CL+ L+ AL YLH+ H D+K ++L
Sbjct: 128 ALTDIVTHTRMNEEQI-ATVCLSVLR----------ALSYLHNQ---GVIHRDIKSDSIL 173
Query: 548 LDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVSINGD 600
L + ++DFG ++K +P + GT ++AP + G+EV D
Sbjct: 174 LTSDGRIKLSDFGFCAQVSKEVP------KRKXLVGTPYWMAPEVISRLPYGTEV----D 223
Query: 601 VYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVD-STLLADDEDLTITS 659
++S GI+++E++ + P E + R LP V D+ S++L DL +
Sbjct: 224 IWSLGIMVIEMIDGEPP--YFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 660 NQRQR 664
QR
Sbjct: 282 EPSQR 286
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 86
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 87 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 127
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 128 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 179
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 94
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 95 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 135
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 136 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 187
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 86 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD--DHVQFL 126
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 178
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 105/235 (44%), Gaps = 30/235 (12%)
Query: 438 HGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS 497
G + E + L+ + H N+VK++ V +D +D +V+E ++ G + E
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVME------ 127
Query: 498 GADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVA 557
V K L+ Q D+ ++YLH+ H D+KPSN+L+ + +A
Sbjct: 128 -----VPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
Query: 558 DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING---DVYSYGILLLELMTR 614
DFG++ + S+ GT ++AP ++ +G DV++ G+ L +
Sbjct: 180 DFGVSNEFKGSDALLSN--TVGTPAFMAPESLSETRKI-FSGKALDVWAMGVTLYCFVFG 236
Query: 615 KRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLADD-EDLTITSNQRQRQARI 668
+ P M E M LH+ ++ ++ D +A+D +DL + ++RI
Sbjct: 237 QCP--FMDERIMCLHSKIKS----QALEFPDQPDIAEDLKDLITRMLDKNPESRI 285
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+A+K+++ L+ + + E ++ + H N+VK+ V + + L+ E+
Sbjct: 40 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLIMEYAS 94
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 95 GGEVFDYL-VAHGRMKEKEARS--KFRQ-------IVSAVQYCH---QKRIVHRDLKAEN 141
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + ++G K G+ Y AP + D
Sbjct: 142 LLLDADMNIKIADFGFSNEF--------TVGGKLDTFCGSPPYAAPELFQGKKYDGPEVD 193
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 194 VWSLGVILYTLVSGSLPFD 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 52 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 108
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 109 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 149
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 150 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 201
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGX 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 101
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 102 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 142
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 143 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 194
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 112
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 113 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 153
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 154 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 205
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 109
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 110 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 150
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 151 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 202
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 86 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 126
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 178
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 96 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 136
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 188
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 91
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 92 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 132
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 133 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 85
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 86 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 126
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 127 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGF 178
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 52 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 108
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 109 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 149
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 150 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 201
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 80 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 127
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 182
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 80 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 127
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 182
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 22/216 (10%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 39 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 97
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCL--NFL---QRINI 517
L C+ K ++ EF G+L +L + P+ L +FL I
Sbjct: 98 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
+ VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 211 RLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK+++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVMEYAS 96
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARA--KFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 143
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + + G K G Y AP + D
Sbjct: 144 LLLDADMNIKIADFGFSNEF--------TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 425 KTIIAVKVLNLLHHGASKSSI-AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEF 483
K +A+K +NL S + E A+ H N+V T + D LV +
Sbjct: 40 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT-----SFVVKDELWLVMKL 94
Query: 484 MHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKP 543
+ GS+ + + + K L+ I +V L+YLH + Q H D+K
Sbjct: 95 LSGGSVLDIIKHIVA--KGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKA 149
Query: 544 SNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK---GTIGYIAPAEYGLGSEVSINGD 600
N+LL + + +ADFG++ L T + K GT ++AP D
Sbjct: 150 GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 209
Query: 601 VYSYGILLLELMTRKRP 617
++S+GI +EL T P
Sbjct: 210 IWSFGITAIELATGAAP 226
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 107 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 154
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 209
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 210 QSDIWSMGLSLVEMAVGRYP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 142 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLREKHK--IM 189
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 244
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 245 QSDIWSMGLSLVEMAVGRYP 264
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 425 KTIIAVKVLNLLHHGASKSSI-AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEF 483
K +A+K +NL S + E A+ H N+V T + D LV +
Sbjct: 35 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT-----SFVVKDELWLVMKL 89
Query: 484 MHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKP 543
+ GS+ + + + K L+ I +V L+YLH + Q H D+K
Sbjct: 90 LSGGSVLDIIKHIVA--KGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKA 144
Query: 544 SNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK---GTIGYIAPAEYGLGSEVSINGD 600
N+LL + + +ADFG++ L T + K GT ++AP D
Sbjct: 145 GNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 204
Query: 601 VYSYGILLLELMTRKRP 617
++S+GI +EL T P
Sbjct: 205 IWSFGITAIELATGAAP 221
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 80 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLREKHK--IM 127
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 182
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 109
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 110 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 150
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 151 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGX 202
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 96
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 97 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 137
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGY 189
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 80 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 127
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 182
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 96
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 97 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 137
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGY 189
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 80 SICMEHMDGGSLDQVLK------KAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 127
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + + GT Y++P E G+ S+
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDSMANSFVGTRSYMSP-ERLQGTHYSV 182
Query: 598 NGDVYSYGILLLELMTRKRP 617
D++S G+ L+E+ + P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYP 202
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 96
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 97 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 137
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 138 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGY 189
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AV++++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVMEYAS 96
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARA--KFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 143
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + + G K G+ Y AP + D
Sbjct: 144 LLLDADMNIKIADFGFSNEF--------TFGNKLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 85/221 (38%), Gaps = 37/221 (16%)
Query: 446 AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA 505
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEA 253
Query: 506 PKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLA 562
L F Q + A++YLH + H DLKP NVLL + + + DFG +
Sbjct: 254 TCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 303
Query: 563 KLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------E 610
K+L L + + GT Y+AP N D +S G++L E
Sbjct: 304 KILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
Query: 611 LMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 361 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 401
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 84/204 (41%), Gaps = 20/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV-CSGV 469
GSFG V++ L E + KVL + E +R ++H N+V + S
Sbjct: 51 GSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVDLKAFFYSNG 105
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
D K + F LV E++ P + + K + + I + + L+ L
Sbjct: 106 DKKDEVFLNLVLEYV----------PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 530 HDCQPTTAHCDLKPSNVLLDHEM-TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
+ H D+KP N+LLD + DFG AK+L S I + Y AP
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR---YYRAPEL 212
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
+ + N D++S G ++ ELM
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELM 236
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AV++++ L+ + + E ++ + H N+VK+ V + + LV E+
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVI-----ETEKTLYLVMEYAS 96
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 97 GGEVFDYL-VAHGRMKEKEARA--KFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 143
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + + G K G+ Y AP + D
Sbjct: 144 LLLDADMNIKIADFGFSNEF--------TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 44 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------- 93
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 94 ----------FTPQKSLEE-FQDVYIVMELMDA----NLCQVIQMELDHERMSYLLYQML 138
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
C +K+LH H DLKPSN+++ + T + DFGLA+ + + + +
Sbjct: 139 CGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR---- 191
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 240
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 37/220 (16%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEAT 114
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAK 563
L F Q + A++YLH + H DLKP NVLL + + + DFG +K
Sbjct: 115 CKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------EL 611
+L L + + GT Y+AP N D +S G++L E
Sbjct: 165 ILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
Query: 612 MTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 222 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 261
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 37/220 (16%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEAT 115
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAK 563
L F Q + A++YLH + H DLKP NVLL + + + DFG +K
Sbjct: 116 CKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------EL 611
+L L + + GT Y+AP N D +S G++L E
Sbjct: 166 ILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 612 MTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 262
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+A+K+++ L+ + + E ++ + H N+VK+ V + + L+ E+
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKTLYLIMEYAS 97
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 98 GGEVFDYL-VAHGRMKEKEARS--KFRQ-------IVSAVQYCH---QKRIVHRDLKAEN 144
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD +M +ADFG + ++G K G Y AP + D
Sbjct: 145 LLLDADMNIKIADFGFSNEF--------TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVD 196
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTVCSG 468
G +G V++G +G+ + AVK+ + KS E + RH+N++ +
Sbjct: 19 GRYGEVWRGSW-QGENV-AVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ L+ + GSL ++L T++ CL I + +A L +L
Sbjct: 74 SRHSSTQL-WLITHYHEMGSLYDYLQLT-----TLDTVSCLR------IVLSIASGLAHL 121
Query: 529 HHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA--HLQTSSIGVKGTI 581
H + +P AH DLK N+L+ +AD GLA + + L + GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 582 GYIAPAEYGLGSEVSI-----NGDVYSYGILLLELMTR 614
Y+AP +V D++++G++L E+ R
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 37/220 (16%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEAT 115
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAK 563
L F Q + A++YLH + H DLKP NVLL + + + DFG +K
Sbjct: 116 CKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------EL 611
+L L + + GT Y+AP N D +S G++L E
Sbjct: 166 ILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 612 MTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 262
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTVCSG 468
G +G V++G +G+ + AVK+ + KS E + RH+N++ +
Sbjct: 19 GRYGEVWRGSW-QGENV-AVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ L+ + GSL ++L T++ CL I + +A L +L
Sbjct: 74 SRHSSTQL-WLITHYHEMGSLYDYLQLT-----TLDTVSCLR------IVLSIASGLAHL 121
Query: 529 HHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA--HLQTSSIGVKGTI 581
H + +P AH DLK N+L+ +AD GLA + + L + GT
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 582 GYIAPAEYGLGSEVSI-----NGDVYSYGILLLELMTR 614
Y+AP +V D++++G++L E+ R
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 31/218 (14%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI--RHKNLVKILTVCSG 468
G +G V++G +G+ + AVK+ + KS E + RH+N++ +
Sbjct: 48 GRYGEVWRGSW-QGENV-AVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYL 528
+ L+ + GSL ++L T++ CL I + +A L +L
Sbjct: 103 SRHSSTQL-WLITHYHEMGSLYDYLQLT-----TLDTVSCLR------IVLSIASGLAHL 150
Query: 529 HHDC-----QPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPA--HLQTSSIGVKGTI 581
H + +P AH DLK N+L+ +AD GLA + + L + GT
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 210
Query: 582 GYIAPAEYGLGSEVSI-----NGDVYSYGILLLELMTR 614
Y+AP +V D++++G++L E+ R
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 85/221 (38%), Gaps = 37/221 (16%)
Query: 446 AECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEA 505
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEA 239
Query: 506 PKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLA 562
L F Q + A++YLH + H DLKP NVLL + + + DFG +
Sbjct: 240 TCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289
Query: 563 KLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------E 610
K+L L + + GT Y+AP N D +S G++L E
Sbjct: 290 KILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
Query: 611 LMTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 347 HRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 387
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 37/220 (16%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEAT 115
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAK 563
L F Q + A++YLH + H DLKP NVLL + + + DFG +K
Sbjct: 116 CKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------EL 611
+L L + + GT Y+AP N D +S G++L E
Sbjct: 166 ILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 612 MTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 262
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 37/220 (16%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E L+ + H ++KI DY +V E M G L V G + EA
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGEL---FDKVVGNKRLKEAT 121
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAK 563
L F Q + A++YLH + H DLKP NVLL + + + DFG +K
Sbjct: 122 CKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING--DVYSYGILLL----------EL 611
+L L + + GT Y+AP N D +S G++L E
Sbjct: 172 ILGETSLMRT---LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Query: 612 MTRKRPSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
T+ D + G N + + +D+V L+ D
Sbjct: 229 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 268
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 96 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 136
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 188
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
IA+ + AL++LH + H D+KPSNVL++ + DFG++ L +
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 576 GVKGTIGYIAPAEYGLGSEV-----SINGDVYSYGILLLELMTRKRPSD 619
G K Y+AP + E+ S+ D++S GI ++EL + P D
Sbjct: 171 GCK---PYMAPER--INPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 39 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 96 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 136
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGLA+ H G
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGY 188
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 19/148 (12%)
Query: 478 ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTA 537
++ E M GSL++ L K P+ L +++IA V L YL +
Sbjct: 83 SICMEHMDGGSLDQVL------KKAGRIPE--QILGKVSIA--VIKGLTYLRE--KHKIM 130
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KPSN+L++ + DFG++ L + + GT Y++P E G+ S+
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQL----IDEMANEFVGTRSYMSP-ERLQGTHYSV 185
Query: 598 NGDVYSYGILLLELMTRK--RPSDIMFE 623
D++S G+ L+E+ + RP +FE
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAIFE 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNIRHK-NLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 40 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 98
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTV---EAPKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V EAP+ L +FL
Sbjct: 99 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 210 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 105 TLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKL 164
+++ +I N++ I +S+ GI N++ L + N+L A+ EL NL L + N+L
Sbjct: 42 SIDQIIANNSDI-KSV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQL 97
Query: 165 SGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQCQSLTTINLSYNNLSGTIPPQLMDL 223
L L +L L+EN LQ S+P + + +LT +NL++N L ++P + D
Sbjct: 98 QSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDK 155
Query: 224 TSLSVGLDLSRNQLVGSLPTEV-GKLINLEILFISRNMLE 262
+ LDLS NQL SLP V KL L+ L + +N L+
Sbjct: 156 LTNLTELDLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQLK 194
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 31/161 (19%)
Query: 106 LETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKL 164
L LI N++ +S+P G+ K NL+ L + +NQL +L NL L + N+L
Sbjct: 87 LTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQL 145
Query: 165 SGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQCQSLTTINLSYNNLSGTIPPQLMDL 223
S+P + + +LT ++LSYN L ++P + D
Sbjct: 146 Q-------------------------SLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDK 179
Query: 224 TSLSVGLDLSRNQLVGSLPTEV-GKLINLEILFISRNMLEC 263
+ L L +NQL S+P V +L +L+ +++ N +C
Sbjct: 180 LTQLKDLRLYQNQL-KSVPDGVFDRLTSLQYIWLHDNPWDC 219
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 95 LPGCICNFSITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLSGTISPAIGELQN 153
LP + + L+ L+ N++ +S+P G+ K NL L++ NQL +L N
Sbjct: 100 LPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTN 158
Query: 154 LVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQCQSLTTINLSYNNL 212
L L ++ N+L L +L L L +N L+ S+P + + SL I L N
Sbjct: 159 LTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPW 217
Query: 213 SGTIP 217
T P
Sbjct: 218 DCTCP 222
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + D+GLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKSLEE-FQDVYIVMELMDA----NLSQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G+++ E++ ++F G ++ + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGVIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKSLEE-FQDVYIVMELMDA----NLSQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G+++ E++ ++F G ++ + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGVIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V++ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DFGL + H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 50/242 (20%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKI 462
I GS+G V I ++ + I A+K++N ++ + E ++ + H N+ ++
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKT------------VEAPKC-- 508
V Y+ + + LV E H G L + L+ V D T P+C
Sbjct: 94 YEV-----YEDEQYICLVMELCHGGHLLDKLN-VFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 509 -------------LNFLQR----INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL--D 549
L+F+QR NI + AL YLH+ H D+KP N L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTN 204
Query: 550 HEMTAHVADFGLAK-LLPPAHLQTSSIGVK-GTIGYIAPAEYGLGSE-VSINGDVYSYGI 606
+ DFGL+K + + + K GT ++AP +E D +S G+
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 607 LL 608
LL
Sbjct: 265 LL 266
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 28 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 86
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 87 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 129
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 130 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 186
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 187 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 16 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 74
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 75 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 117
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 118 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 174
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 175 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 203
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L A K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQGKAFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 139
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPEL 193
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 38 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 96
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 97 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 139
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 140 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 196
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 197 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 38 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 96
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 97 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 139
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 140 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 196
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 197 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 36 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 94
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG-ADKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 95 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 137
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 138 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 194
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 195 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 18 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 76
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 77 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 119
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 120 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 176
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 177 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 22 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 80
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 81 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 123
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 124 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 180
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 181 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 22 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 80
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGA-DKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 81 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 123
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 124 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKW 180
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 181 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L A K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQGKAFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 139
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPEL 193
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA----KLLPPAHLQTS 573
A ++ L+++H+ + DLKP+N+LLD ++D GLA K P A +
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT GY+AP G + D +S G +L +L+ P
Sbjct: 352 -----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA----KLLPPAHLQTS 573
A ++ L+++H+ + DLKP+N+LLD ++D GLA K P A +
Sbjct: 298 AAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT GY+AP G + D +S G +L +L+ P
Sbjct: 352 -----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA----KLLPPAHLQTS 573
A ++ L+++H+ + DLKP+N+LLD ++D GLA K P A +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT GY+AP G + D +S G +L +L+ P
Sbjct: 352 -----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 88/212 (41%), Gaps = 30/212 (14%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIA-ECSALRNI-RHKNLVKILTVCSG 468
G++G VYKG + + A+KV+++ G + I E + L+ H+N+
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92
Query: 469 VDYKG-DDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
+ G DD LV EF GS+ + + G N L+ IA L+
Sbjct: 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-----------NTLKEEWIAYICREILRG 141
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK----GTIGY 583
L H Q H D+K NVLL + DFG++ L ++G + GT +
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL------DRTVGRRNTFIGTPYW 195
Query: 584 IAPA----EYGLGSEVSINGDVYSYGILLLEL 611
+AP + + D++S GI +E+
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 41/217 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ L+H ++ + E L++++H+N++ +L V
Sbjct: 39 GAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH---ARRTYRELRLLKHLKHENVIGLLDV 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ D + + + L + + +D+ V+ FL + L
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ------FL-----VYQLLRGL 144
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
KY+H H DLKPSNV ++ + + DFGLA+ G T Y A
Sbjct: 145 KYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRA 196
Query: 586 PAEYGLGSEVSING-------DVYSYGILLLELMTRK 615
P E+ +N D++S G ++ EL+ K
Sbjct: 197 P-------EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA----KLLPPAHLQTS 573
A ++ L+++H+ + DLKP+N+LLD ++D GLA K P A +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT GY+AP G + D +S G +L +L+ P
Sbjct: 351 -----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFLQVRKFS---------LDLASLILYAYQLST 122
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-KLPIKW 178
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 179 MAPESINFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L A K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQGKAFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 87 EKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 139
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPEL 193
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 411 GSFGSVYKGILDEGK---TIIAVK-VLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+F V IL E K ++A+K + G S E + L I+H N+V + +
Sbjct: 29 GAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI- 84
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAIDVACA 524
Y+ L+ + + G L D+ VE + +R + V A
Sbjct: 85 ----YESGGHLYLIMQLVSGGEL---------FDRIVEKG---FYTERDASRLIFQVLDA 128
Query: 525 LKYLHHDCQPTTAHCDLKPSNVL---LDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+KYLH H DLKP N+L LD + ++DFGL+K+ P + +++ GT
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GTP 182
Query: 582 GYIAP 586
GY+AP
Sbjct: 183 GYVAP 187
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 10/208 (4%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G G V+ + ++ +A+K + L + K ++ E +R + H N+VK+ +
Sbjct: 22 GGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSG 81
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
+ D + E ++E++ + +E L R+ + LKY+H
Sbjct: 82 SQLTDDVGSLTELNSVYIVQEYME--TDLANVLEQGPLLEEHARL-FMYQLLRGLKYIH- 137
Query: 531 DCQPTTAHCDLKPSNVLLDHE-MTAHVADFGLAKLLPPAHLQTSSIGVKG--TIGYIAPA 587
H DLKP+N+ ++ E + + DFGLA+++ P + + +G T Y +P
Sbjct: 138 --SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS-EGLVTKWYRSPR 194
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRK 615
+ + D+++ G + E++T K
Sbjct: 195 LLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 411 GSFGSVYKGILDEGK---TIIAVK-VLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+F V IL E K ++A+K + G S E + L I+H N+V + +
Sbjct: 29 GAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI- 84
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAIDVACA 524
Y+ L+ + + G L D+ VE + +R + V A
Sbjct: 85 ----YESGGHLYLIMQLVSGGEL---------FDRIVEKG---FYTERDASRLIFQVLDA 128
Query: 525 LKYLHHDCQPTTAHCDLKPSNVL---LDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+KYLH H DLKP N+L LD + ++DFGL+K+ P + +++ GT
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GTP 182
Query: 582 GYIAP 586
GY+AP
Sbjct: 183 GYVAP 187
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 122
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 179 MAPESINFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 411 GSFGSVYKGILDEGK---TIIAVK-VLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+F V IL E K ++A+K + G S E + L I+H N+V + +
Sbjct: 29 GAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI- 84
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAIDVACA 524
Y+ L+ + + G L D+ VE + +R + V A
Sbjct: 85 ----YESGGHLYLIMQLVSGGEL---------FDRIVEKG---FYTERDASRLIFQVLDA 128
Query: 525 LKYLHHDCQPTTAHCDLKPSNVL---LDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+KYLH H DLKP N+L LD + ++DFGL+K+ P + +++ GT
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GTP 182
Query: 582 GYIAP 586
GY+AP
Sbjct: 183 GYVAP 187
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 380 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 438
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG-ADKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 439 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 481
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 482 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 538
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 539 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 567
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 106 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 150
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 151 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 206
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 207 MAPESINFRRFTSAS-DVWMFGVCMWEIL 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT-SSIGVKGT----IGYIAPAEYGLG 592
H DL N+LL H + DFGLA+ H++ S+ VKG + ++AP E
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLAR-----HIKNDSNYVVKGNARLPVKWMAP-ESIFN 244
Query: 593 SEVSINGDVYSYGILLLELMT 613
+ DV+SYGI L EL +
Sbjct: 245 CVYTFESDVWSYGIFLWELFS 265
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 35/185 (18%)
Query: 411 GSFGSVYKGILDEGK---TIIAVK-VLNLLHHGASKSSIAECSALRNIRHKNLVKILTVC 466
G+F V IL E K ++A+K + G S E + L I+H N+V + +
Sbjct: 29 GAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI- 84
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAIDVACA 524
Y+ L+ + + G L D+ VE + +R + V A
Sbjct: 85 ----YESGGHLYLIMQLVSGGEL---------FDRIVEKG---FYTERDASRLIFQVLDA 128
Query: 525 LKYLHHDCQPTTAHCDLKPSNVL---LDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+KYLH H DLKP N+L LD + ++DFGL+K+ P + +++ GT
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC---GTP 182
Query: 582 GYIAP 586
GY+AP
Sbjct: 183 GYVAP 187
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 94/255 (36%), Gaps = 36/255 (14%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVKI 462
+C + GSFG V K + AVKV+N +S + E L+ + H N++K+
Sbjct: 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAID 520
+ F G L +G + E K F + I
Sbjct: 87 FEILEDSS-----------SFYIVGEL------YTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
V + Y+H + H DLKP N+LL + + + DFGL+ I
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-- 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637
GT YIAP L DV+S G++L L++ P F G R
Sbjct: 185 -GTAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVETG 237
Query: 638 DHVMDIVDSTLLADD 652
+ D+ ++DD
Sbjct: 238 KYAFDLPQWRTISDD 252
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 27/218 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 40 GAFGQVIEADAFGIDKTATXRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 98
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLH-------PVSGADKTVEAPKCLNFLQRI 515
L C+ K ++ EF G+L +L P D + L I
Sbjct: 99 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKD---FLTLEHLI 151
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
+ VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 152 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 576 GVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 209 DARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 122
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 179 MAPESINFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 139
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPEL 193
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L K+ E +R + H N+V++
Sbjct: 32 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 87
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 88 EKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 140
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 141 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPEL 194
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELL 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFLQVRKFS---------LDLASLILYAYQLST 122
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 123 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 178
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 179 MAPESINFRRFTSAS-DVWMFGVCMWEIL 206
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 139
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPEL 193
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 81 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 125
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 126 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 181
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 182 MAPESINFRRFTSAS-DVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 80 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 124
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 125 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 180
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 181 MAPESINFRRFTSAS-DVWMFGVCMWEIL 208
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 94/255 (36%), Gaps = 36/255 (14%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVKI 462
+C + GSFG V K + AVKV+N +S + E L+ + H N++K+
Sbjct: 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAID 520
+ F G L +G + E K F + I
Sbjct: 87 FEILEDSS-----------SFYIVGEL------YTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
V + Y+H + H DLKP N+LL + + + DFGL+ I
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-- 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637
GT YIAP L DV+S G++L L++ P F G R
Sbjct: 185 -GTAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVETG 237
Query: 638 DHVMDIVDSTLLADD 652
+ D+ ++DD
Sbjct: 238 KYAFDLPQWRTISDD 252
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 87
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 143
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 144 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 198 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 94/255 (36%), Gaps = 36/255 (14%)
Query: 405 LCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVKI 462
+C + GSFG V K + AVKV+N +S + E L+ + H N++K+
Sbjct: 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQR--INIAID 520
+ F G L +G + E K F + I
Sbjct: 87 FEILEDSS-----------SFYIVGEL------YTGGELFDEIIKRKRFSEHDAARIIKQ 129
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
V + Y+H + H DLKP N+LL + + + DFGL+ I
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-- 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLP 637
GT YIAP L DV+S G++L L++ P F G R
Sbjct: 185 -GTAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPP----FYGKNEYDILKRVETG 237
Query: 638 DHVMDIVDSTLLADD 652
+ D+ ++DD
Sbjct: 238 KYAFDLPQWRTISDD 252
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 83 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 127
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 128 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 183
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 184 MAPESINFRRFTSAS-DVWMFGVCMWEIL 211
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSI-----AECSALRNIRHKNLVKILTV 465
G+FG+V KG + K ++ + +L + A+ ++ AE + ++ + + +V+++ +
Sbjct: 381 GNFGTVKKGYY-QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGI 439
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSG-ADKTVEAPKCLNFLQRINIAIDVACA 524
C + LV E G L ++L DK + I + V+
Sbjct: 440 CEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNI-----------IELVHQVSMG 482
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLL-PPAHLQTSSIGVKGTIGY 583
+KYL + H DL NVLL + A ++DFGL+K L + + K + +
Sbjct: 483 MKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW 539
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELMT 613
AP + S DV+S+G+L+ E +
Sbjct: 540 YAPECINY-YKFSSKSDVWSFGVLMWEAFS 568
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 208 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 75 GVIT------ENPVWIIMELCTLGELRSFLQVRKYS---------LDLASLILYAYQLST 119
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 120 ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 175
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 176 MAPESINFRRFTSAS-DVWMFGVCMWEIL 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVL---NLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
G FG+VY + I+A+KVL + G E ++ H N++++
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY---- 89
Query: 468 GVDYKGDDFK-ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
+Y D + L+ E+ G L + L D+ A I ++A AL
Sbjct: 90 --NYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA----------TIMEELADALM 137
Query: 527 YLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
Y H H D+KP N+LL + +ADFG + P +T GT+ Y+ P
Sbjct: 138 YCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYL-P 189
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638
E G + D++ G+L EL+ P FE + + R V D
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPP----FESASHNETYRRIVKVD 237
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 94
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 95 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 150
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 151 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 205 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 41/217 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ L+H ++ + E L++++H+N++ +L V
Sbjct: 39 GAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH---ARRTYRELRLLKHLKHENVIGLLDV 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ D + + + L + + +D+ V+ FL + L
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ------FL-----VYQLLRGL 144
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
KY+H H DLKPSNV ++ + + DFGLA+ G T Y A
Sbjct: 145 KYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRA 196
Query: 586 PAEYGLGSEVSING-------DVYSYGILLLELMTRK 615
P E+ +N D++S G ++ EL+ K
Sbjct: 197 P-------EIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 410 MGSFGS--VYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRHKNLVKI 462
+GS GS V++ +L+E K I A+K +NL + ++ IA + L+ +H + KI
Sbjct: 20 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSD--KI 74
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQRINIAID 520
+ + DY+ D +Y M G+++ WL + K ++ +R + +
Sbjct: 75 IRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERKSYWKN 119
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ A+ +H Q H DLKP+N L+ M + DFG+A + P GT
Sbjct: 120 MLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGT 175
Query: 581 IGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ Y+ P S NG DV+S G +L + K P + LH
Sbjct: 176 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 235
Query: 631 FARTVLPDHVMDIVD 645
+ P+H ++ D
Sbjct: 236 I---IDPNHEIEFPD 247
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 103/246 (41%), Gaps = 51/246 (20%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ L+H ++ + E L++++H+N++ +L V
Sbjct: 31 GAYGSVCSAYDARLRQKVAVKKLSRPFQSLIH---ARRTYRELRLLKHLKHENVIGLLDV 87
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ D + + + L + + +D+ V+ FL + L
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ------FL-----VYQLLRGL 136
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
KY+H H DLKPSNV ++ + + DFGLA+ G T Y A
Sbjct: 137 KYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRA 188
Query: 586 PAEYGLGSEVSING-------DVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTVLPD 638
P E+ +N D++S G ++ EL+ K +F G+ + R
Sbjct: 189 P-------EIMLNWMHYNQTVDIWSVGCIMAELLQGK----ALFPGSDYIDQLKR----- 232
Query: 639 HVMDIV 644
+M++V
Sbjct: 233 -IMEVV 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 83
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 84 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 139
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 140 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 194 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 79
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 80 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 135
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 136 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 190 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNIVRLRYFF---- 82
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
Y + K +VY + + E ++ V A A + L + + +L Y+H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRV--ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR---YYRAPELI 194
Query: 590 GLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 87
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 88 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 199 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 410 MGSFGS--VYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRHKNLVKI 462
+GS GS V++ +L+E K I A+K +NL + ++ IA + L+ +H + KI
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSD--KI 90
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQRINIAID 520
+ + DY+ D +Y M G+++ WL + K ++ +R + +
Sbjct: 91 IRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERKSYWKN 135
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ A+ +H Q H DLKP+N L+ M + DFG+A + P GT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGT 191
Query: 581 IGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ Y+ P S NG DV+S G +L + K P + LH
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251
Query: 631 FARTVLPDHVMDIVD 645
+ P+H ++ D
Sbjct: 252 I---IDPNHEIEFPD 263
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT----IGYIAPAEYGLGS 593
H DL N+LL H + DFGLA+ + S+ VKG + ++AP E
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAP-ESIFNC 238
Query: 594 EVSINGDVYSYGILLLELMT 613
+ DV+SYGI L EL +
Sbjct: 239 VYTFESDVWSYGIFLWELFS 258
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
GSFG VY+ L + ++A+K +L K+ E +R + H N+V++
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 471 YKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
K D+ + LV +++ H S A +T+ ++ ++ +L Y+H
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL------FRSLAYIH 139
Query: 530 HDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAE 588
H D+KP N+LLD + + DFG AK L S I + Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR---YYRAPEL 193
Query: 589 YGLGSEVSINGDVYSYGILLLELM 612
++ + + DV+S G +L EL+
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 87
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 88 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 143
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 144 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 198 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 109
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 165
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 166 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 220 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 48/233 (20%)
Query: 415 SVYKGILDEGKTIIAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK 472
+ Y IL+ +A+K L+ + +K + E ++ + HKN++ +L V
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------- 91
Query: 473 GDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAID----------VA 522
F SLEE V + ++A N Q I + +D +
Sbjct: 92 ----------FTPQKSLEE-FQDVYIVMELMDA----NLSQVIQMELDHERMSYLLYQML 136
Query: 523 CALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+K+LH H DLKPSN+++ + T + DFGLA+ + + T + T
Sbjct: 137 VGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYV---VTRY 190
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFARTV 635
Y AP E LG N D++S G ++ E++ ++F G ++ + + +
Sbjct: 191 YRAP-EVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNKVI 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT----IGYIAPAEYGLGS 593
H DL N+LL H + DFGLA+ + S+ VKG + ++AP E
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAP-ESIFNC 240
Query: 594 EVSINGDVYSYGILLLELMT 613
+ DV+SYGI L EL +
Sbjct: 241 VYTFESDVWSYGIFLWELFS 260
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVK-VLNLLHHGAS-KSSIAECSALRNIRHKNLVKILTV 465
I GS+G V + K ++A+K +L + K + E + L + H ++VK+L +
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
D + D +V E S K P L L + ++ +
Sbjct: 121 VIPKDVEKFDELYVVLEIAD-----------SDFKKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563
KY+H H DLKP+N L++ + + V DFGLA+
Sbjct: 170 KYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 458 GVIT------ENPVWIIMELCTLGELRSFLQVRKFS---------LDLASLILYAYQLST 502
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 558
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 559 MAPESINFRRFTSAS-DVWMFGVCMWEIL 586
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 410 MGSFGS--VYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRHKNLVKI 462
+GS GS V++ +L+E K I A+K +NL + ++ IA + L+ +H + KI
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSD--KI 90
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQRINIAID 520
+ + DY+ D +Y M G+++ WL + K ++ +R + +
Sbjct: 91 IRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERKSYWKN 135
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ A+ +H Q H DLKP+N L+ M + DFG+A + P GT
Sbjct: 136 MLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGT 191
Query: 581 IGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ Y+ P S NG DV+S G +L + K P + LH
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251
Query: 631 FARTVLPDHVMDIVD 645
+ P+H ++ D
Sbjct: 252 I---IDPNHEIEFPD 263
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 46/255 (18%)
Query: 410 MGSFGS--VYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRHKNLVKI 462
+GS GS V++ +L+E K I A+K +NL + ++ IA + L+ +H + KI
Sbjct: 16 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSD--KI 70
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQRINIAID 520
+ + DY+ D +Y M G+++ WL D N L+
Sbjct: 71 IRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLE------- 118
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
A+ +H Q H DLKP+N L+ M + DFG+A + P GT
Sbjct: 119 ---AVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGT 171
Query: 581 IGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ Y+ P S NG DV+S G +L + K P + LH
Sbjct: 172 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 231
Query: 631 FARTVLPDHVMDIVD 645
+ P+H ++ D
Sbjct: 232 I---IDPNHEIEFPD 243
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 87
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 88 LGACT----KPGGPLMVITEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 199 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 83/201 (41%), Gaps = 38/201 (18%)
Query: 452 RNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNF 511
R++RH N+V+ V + A+V E+ G L E + A + E + F
Sbjct: 70 RSLRHPNIVRFKEVILTPTHL-----AIVMEYASGGELFER---ICNAGRFSED-EARFF 120
Query: 512 LQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH--VADFGLAKLLPPAH 569
Q++ + A A++ AH DLK N LLD +ADFG +K +
Sbjct: 121 FQQLISGVSYAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SV 168
Query: 570 LQTSSIGVKGTIGYIAPAEYGLGSEVSIN-GDVYSYGILLLELMTRKRPSDIMFEGNMNL 628
L + GT YIAP E L E DV+S G+ L ++ P FE
Sbjct: 169 LHSQPKSAVGTPAYIAP-EVLLKKEYDGKVADVWSCGVTLYVMLVGAYP----FEDPEEP 223
Query: 629 HNFARTV---------LPDHV 640
NF +T+ +PD+V
Sbjct: 224 KNFRKTIHRILNVQYAIPDYV 244
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 88
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 89 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 144
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 145 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 199 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + FGLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT----IGYIAPAEYGLGS 593
H DL N+LL H + DFGLA+ + S+ VKG + ++AP E
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAP-ESIFNC 222
Query: 594 EVSINGDVYSYGILLLELMT 613
+ DV+SYGI L EL +
Sbjct: 223 VYTFESDVWSYGIFLWELFS 242
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 410 MGSFGS--VYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRHKNLVKI 462
+GS GS V++ +L+E K I A+K +NL + ++ IA + L+ +H + KI
Sbjct: 17 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSD--KI 71
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQRINIAID 520
+ + DY+ D +Y M G+++ WL + K ++ +R + +
Sbjct: 72 IRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERKSYWKN 116
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ A+ +H Q H DLKP+N L+ M + DFG+A + P GT
Sbjct: 117 MLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGT 172
Query: 581 IGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ Y+ P S NG DV+S G +L + K P + LH
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232
Query: 631 FARTVLPDHVMDIVD 645
+ P+H ++ D
Sbjct: 233 I---IDPNHEIEFPD 244
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 208 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 27/201 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G+FG V++ + + K +N + + E S + + H L+ +
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--- 118
Query: 471 YKGDDFK-ALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC-ALKYL 528
D ++ L+ EF+ G L ++ D + + +N++++ AC LK++
Sbjct: 119 ---DKYEMVLILEFLSGGEL---FDRIAAEDYKMSEAEVINYMRQ-------ACEGLKHM 165
Query: 529 HHDCQPTTAHCDLKPSNVLLDHEMTAHVA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
H + + H D+KP N++ + + + V DFGLA L P + + V A
Sbjct: 166 H---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI----VKVTTATAEFAA 218
Query: 587 AEYGLGSEVSINGDVYSYGIL 607
E V D+++ G+L
Sbjct: 219 PEIVDREPVGFYTDMWAIGVL 239
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT----IGYIAPAEYGLGS 593
H DL N+LL H + DFGLA+ + S+ VKG + ++AP E
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIK----NDSNYVVKGNARLPVKWMAP-ESIFNC 245
Query: 594 EVSINGDVYSYGILLLELMT 613
+ DV+SYGI L EL +
Sbjct: 246 VYTFESDVWSYGIFLWELFS 265
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + DF LA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKC----LNFLQRINIA 518
L C+ K ++ EF G+L +L S ++ V L I +
Sbjct: 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
VA +++L H DL N+LL + + DFGLA+ + +
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 579 GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ ++AP E +I DV+S+G+LL E+ +
Sbjct: 208 LPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 75 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 134 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 245 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 80
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 81 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 136
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 137 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 191 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + D GLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 33/199 (16%)
Query: 428 IAVKVLN--LLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
+AVK+++ L+ + + E + + H N+VK+ V + + LV E+
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVI-----ETEKTLYLVXEYAS 96
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G + ++L G K EA F Q + A++Y H Q H DLK N
Sbjct: 97 GGEVFDYL-VAHGRXKEKEAR--AKFRQ-------IVSAVQYCH---QKFIVHRDLKAEN 143
Query: 546 VLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGD 600
+LLD + +ADFG + + G K G Y AP + D
Sbjct: 144 LLLDADXNIKIADFGFSNEF--------TFGNKLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 601 VYSYGILLLELMTRKRPSD 619
V+S G++L L++ P D
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 103
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 104 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFR- 161
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 162 -----SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 214 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 154
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 155 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 210
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 211 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 265 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 38 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 208 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 408 IDMGSFGSVYKGIL---DEGKTIIAVKVL-NLLHHGASKSSIAECSALRNIRHKNLVKIL 463
I G FG V++GI + +A+K N + + E +R H ++VK++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 464 TVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVAC 523
V + ++ ++ E G L +L + L+ I A ++
Sbjct: 458 GVIT------ENPVWIIMELCTLGELRSFLQVRKFS---------LDLASLILYAYQLST 502
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGY 583
AL YL H D+ NVL+ + DFGL++ + + +S G K I +
Sbjct: 503 ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKW 558
Query: 584 IAPAEYGLGSEVSINGDVYSYGILLLELM 612
+AP S + DV+ +G+ + E++
Sbjct: 559 MAPESINFRRFTSAS-DVWMFGVCMWEIL 586
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 109
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 110 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 165
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 166 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 220 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + D GLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 111
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 112 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQLFR- 169
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 170 -----SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 222 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 86/226 (38%), Gaps = 41/226 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSS--IAECSALRNIRHKNLVKILTVC-- 466
G+FG V K A+K + H K S ++E L ++ H+ +V+
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIR---HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 467 --------SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
+ V K F + E+ NG+L + +H + + E +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQM--EYCENGTLYDLIHSENLNQQRDEYWRLFR-------- 123
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK---------LLPPAH 569
+ AL Y+H H DLKP N+ +D + DFGLAK L +
Sbjct: 124 -QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 570 LQTSSIGVKGTIG---YIAPAEYGLGSEVSINGDVYSYGILLLELM 612
L SS + IG Y+A + D+YS GI+ E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
VS+ I GSFG VY+ L + ++A+K +L K+ E +R + H N+
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKNR--ELQIMRKLDHCNI 113
Query: 460 VKILTVCSGVDYKGDD-FKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
V++ K D+ + LV +++ H S A +T+ ++ ++
Sbjct: 114 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMYQL--- 169
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGV 577
+L Y+H H D+KP N+LLD + + DFG AK L S I
Sbjct: 170 ---FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ Y AP ++ + + DV+S G +L EL+
Sbjct: 224 R---YYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 42/231 (18%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G + V++ I + VK+L + K E L N+R I+T+ V
Sbjct: 48 GKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLR--GGPNIITLADIVK 102
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
ALV+E ++N ++ ++ D + F ++ AL Y H
Sbjct: 103 DPVSRTPALVFEHVNNTDFKQLYQTLTDYD--------IRFY-----MYEILKALDYCH- 148
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEY 589
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y
Sbjct: 149 --SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRY 196
Query: 590 GLGSEVSINGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
G E+ ++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 XGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 27/207 (13%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVD 470
G FG V+K +A K++ + E S + + H NL+++
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA----- 154
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ + LV E++ G L D+ ++ L L I + ++++H
Sbjct: 155 FESKNDIVLVMEYVDGGEL---------FDRIIDESYNLTELDTILFMKQICEGIRHMH- 204
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAP-- 586
Q H DLKP N+L + + DFGLA+ P + GT ++AP
Sbjct: 205 --QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEV 259
Query: 587 AEYGLGSEVSINGDVYSYGILLLELMT 613
Y VS D++S G++ L++
Sbjct: 260 VNYDF---VSFPTDMWSVGVIAYMLLS 283
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NVL+DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 12/116 (10%)
Query: 98 CICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTL 157
C C+ +TL+ N S+PAGI + Q L + +NQ++ L NL L
Sbjct: 10 CSCD-----QTLVNCQNIRLASVPAGIPT--DKQRLWLNNNQITKLEPGVFDHLVNLQQL 62
Query: 158 AINTNKLSGNIPPSI-GNLKKLLQLYLIENFLQVSIP-SSLGQCQSLTTINLSYNN 211
N+NKL+ IP + L +L QL L +N L+ SIP + +SLT I L YNN
Sbjct: 63 YFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLK-SIPRGAFDNLKSLTHIYL-YNN 115
Score = 38.1 bits (87), Expect = 0.020, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 82 KHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQL 140
+ L +NNN L PG + + + L+ L FNSNK+ +IP G+ K L L + DN L
Sbjct: 36 QRLWLNNNQITKLEPG-VFDHLVNLQQLYFNSNKL-TAIPTGVFDKLTQLTQLDLNDNHL 93
Query: 141 SGTISPAIGELQNLVTLAINTN 162
A L++L + + N
Sbjct: 94 KSIPRGAFDNLKSLTHIYLYNN 115
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 87
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 88 LGACT----KPGGPLMVITEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 199 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + VADFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 AGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + VADFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + VADFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 46/255 (18%)
Query: 410 MGSFGS--VYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRHKNLVKI 462
+GS GS V++ +L+E K I A+K +NL + ++ IA + L+ +H + KI
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QHSD--KI 118
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQRINIAID 520
+ + DY+ D +Y M G+++ WL + K ++ +R + +
Sbjct: 119 IRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWERKSYWKN 163
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
+ A+ +H Q H DLKP+N L+ M + DFG+A + P GT
Sbjct: 164 MLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 581 IGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEGNMNLHN 630
+ Y+ P S NG DV+S G +L + K P + LH
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279
Query: 631 FARTVLPDHVMDIVD 645
+ P+H ++ D
Sbjct: 280 I---IDPNHEIEFPD 291
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
IA+ + AL++LH + H D+KPSNVL++ DFG++ L +
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 576 GVKGTIGYIAPAEYGLGSEV-----SINGDVYSYGILLLELMTRKRPSD 619
G K Y AP + E+ S+ D++S GI +EL + P D
Sbjct: 198 GCK---PYXAPER--INPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 44/261 (16%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRH 456
+ L I G V++ +L+E K I A+K +NL + ++ IA + L+ +H
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 114
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQR 514
+ KI+ + DY+ D +Y M G+++ WL + K ++ +R
Sbjct: 115 SD--KIIRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWER 157
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
+ ++ A+ +H Q H DLKP+N L+ M + DFG+A + P
Sbjct: 158 KSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVK 213
Query: 575 IGVKGTIGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEG 624
GT+ Y+ P S NG DV+S G +L + K P +
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 625 NMNLHNFARTVLPDHVMDIVD 645
LH + P+H ++ D
Sbjct: 274 ISKLHAI---IDPNHEIEFPD 291
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 29 GAFGQVIEADAFGIDKTATCRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 87
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVE---APKCL--NFL---QR 514
L C+ K ++ EF G+L +L S ++ V AP+ L +FL
Sbjct: 88 LGACT----KPGGPLMVITEFCKFGNLSTYLR--SKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I + VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 199 GDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 406 CWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTV 465
C + G++G VYK +GK + + G S S+ E + LR ++H N++ + V
Sbjct: 27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKV 86
Query: 466 -CSGVDYKGDDFKALVYEFMHNGSLEEW----LHPVSGADKT-VEAPKCLNFLQRINIAI 519
S D K V+ + W H S A+K V+ P+ + ++
Sbjct: 87 FLSHADRK-------VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMV----KSLLY 135
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH----VADFGLAKLL-----PPAHL 570
+ + YLH + H DLKP+N+L+ E +AD G A+L P A L
Sbjct: 136 QILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 571 QTSSIGVKGTIGYIAPAEYGLGSEVSING-DVYSYGILLLELMT 613
+ T Y AP E LG+ D+++ G + EL+T
Sbjct: 193 DPVVV----TFWYRAP-ELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + VADFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLN-----LLHHGASKSSIAECSALRNIRHKNLVKILTV 465
G++GSV + +AVK L+ ++H +K + E L++++H+N++ +L V
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIH---AKRTYRELRLLKHMKHENVIGLLDV 89
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEW-----LHPVSGAD--KTVEAPKCLNFLQRINIA 518
F SLEE+ + + GAD V+ K + +
Sbjct: 90 -----------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD--DHVQFL 130
Query: 519 I-DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
I + LKY+H H DLKPSN+ ++ + + D GLA+ H G
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGY 182
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
T Y AP + D++S G ++ EL+T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 35/221 (15%)
Query: 411 GSFGSVYKGI---LDEGKTIIAVKVLNLLHHGASKSS----IAECSALRNI-RHKNLVKI 462
G+FG V + +D+ T V V +L GA+ S ++E L +I H N+V +
Sbjct: 38 GAFGQVIEADAFGIDKTATXRTVAV-KMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96
Query: 463 LTVCSGVDYKGDDFKALVYEFMHNGSLEEWLH-------PVSGADK---TVEAPKCLNFL 512
L C+ K ++ EF G+L +L P K T+E C +F
Sbjct: 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF- 151
Query: 513 QRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQT 572
VA +++L H DL N+LL + + DFGLA+ +
Sbjct: 152 -------QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 201
Query: 573 SSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E +I DV+S+G+LL E+ +
Sbjct: 202 RKGDARLPLKWMAP-ETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 202
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 243
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 201
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 202 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 242
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P + + G +Y +
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM---YD 210
Query: 597 INGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+ D++S G +L ++ RK P F G+ N R
Sbjct: 211 YSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 153 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 202
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 203 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 243
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P Q ++ V + Y G E+
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--QEYNVRV--------ASRYFKGPELL 203
Query: 597 INGDVYSY-------GILLLELMTRKRPSDIMFEGNMNLHNFAR 633
++ +Y Y G +L ++ RK P F G+ N R
Sbjct: 204 VDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIG 582
AL Y H H D+KP NV++DH+ + D+GLA+ PA + + G
Sbjct: 144 ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 200
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+Y + + D++S G +L ++ R+ P F G N R
Sbjct: 201 PELLVDYQM---YDYSLDMWSLGCMLASMIFRREP---FFHGQDNYDQLVR 245
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 10/111 (9%)
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIG 582
AL Y H H D+KP NV++DH+ + D+GLA+ PA + + G
Sbjct: 149 ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKG 205
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+Y + + D++S G +L ++ R+ P F G N R
Sbjct: 206 PELLVDYQM---YDYSLDMWSLGCMLASMIFRREP---FFHGQDNYDQLVR 250
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 115/275 (41%), Gaps = 40/275 (14%)
Query: 397 LLFVSFLFLCW-IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS-----KSSIAECSA 450
+LF LC I G+F V + I E AVK++++ +S + E S
Sbjct: 20 VLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASI 79
Query: 451 LRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLN 510
++H ++V++L Y D +V+EFM L + + A +
Sbjct: 80 CHMLKHPHIVELLET-----YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134
Query: 511 FLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL---DHEMTAHVADFGLAKLLPP 567
++++I AL+Y H + H D+KP NVLL ++ + DFG+A L
Sbjct: 135 YMRQI------LEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE 185
Query: 568 AHLQTSSIGVKGTIGYIAP---AEYGLGSEVSINGDVYSYGILLLELM--------TRKR 616
+ L G GT ++AP G V DV+ G++L L+ T++R
Sbjct: 186 SGLVAG--GRVGTPHFMAPEVVKREPYGKPV----DVWGCGVILFILLSGCLPFYGTKER 239
Query: 617 PSDIMFEGNMNLHNFARTVLPDHVMDIVDSTLLAD 651
+ + +G ++ + + + D+V L+ D
Sbjct: 240 LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLD 274
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 538 HCDLKPSNVLLDHEMTA-HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVS 596
H D+KP NV++DHE + D+GLA+ P + + G +Y +
Sbjct: 159 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM---YD 215
Query: 597 INGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNFAR 633
+ D++S G +L ++ RK P F G+ N R
Sbjct: 216 YSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 249
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ ++ +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTL 219
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 220 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFGLAK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 15/97 (15%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPA---EYGLGSEVSINGDVYSYGILLLEL 611
GT Y+APA G V D ++ G+L+ E+
Sbjct: 199 CGTPEYLAPAIILSKGYNKAV----DWWALGVLIYEM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 193
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 194 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 226
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK---------LLPPAHLQTSS 574
AL Y+H H DLKP N+ +D + DFGLAK L +L SS
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 575 IGVKGTIG---YIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ IG Y+A + D+YS GI+ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 129/336 (38%), Gaps = 71/336 (21%)
Query: 402 FLFLCWIDMGSFGSV--YKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNL 459
+LF+ + G F V +G+ D A+K + + + E R H N+
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHD--GHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 460 VKILTVCSGVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIA 518
++++ C + +G +A L+ F G+L + + + + L L I
Sbjct: 89 LRLVAYC--LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146
Query: 519 IDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVK 578
++ A Y AH DLKP+N+LL E + D G + + I V+
Sbjct: 147 LEAIHAKGY---------AHRDLKPTNILLGDEGQPVLMDLG--------SMNQACIHVE 189
Query: 579 G---------------TIGYIAPAEYGLGSEVSIN--GDVYSYGILLLELMTRKRPSDIM 621
G TI Y AP + + S I+ DV+S G +L +M + P D++
Sbjct: 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
Query: 622 FEGNMNLHNFARTVLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRI 681
F+ DS LA L+I + R A + ++ +++V
Sbjct: 250 FQKG-------------------DSVALAVQNQLSIPQSPRHSSA-LWQLLNSMMTV--- 286
Query: 682 GVACSMESPQDRMNMTIVVHELQSIKSILLGPKTVS 717
P R ++ +++ +L++++ G T
Sbjct: 287 -------DPHQRPHIPLLLSQLEALQPPAPGQHTTQ 315
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 191
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 192 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 224
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 134 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXL 185
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 186 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 218
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 38/198 (19%)
Query: 428 IAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCSGVDYK----GDDFKALVYEF 483
+AVK+++L + E +R+ +H N+V++ YK G++ L+ EF
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM--------YKSYLVGEELWVLM-EF 123
Query: 484 MHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKP 543
+ G+L + + V ++ + A C LQ AL YLH H D+K
Sbjct: 124 LQGGALTDIVSQVRLNEEQI-ATVCEAVLQ----------ALAYLHAQ---GVIHRDIKS 169
Query: 544 SNVLLDHEMTAHVADFG----LAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSING 599
++LL + ++DFG ++K +P + GT ++AP E S +
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKX------LVGTPYWMAP-EVISRSLYATEV 222
Query: 600 DVYSYGILLLELMTRKRP 617
D++S GI+++E++ + P
Sbjct: 223 DIWSLGIMVIEMVDGEPP 240
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTL 184
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 185 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 217
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 191
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 192 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 224
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 540 DLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVS 596
DLK NV+LD E +ADFG+ K + T GT YIAP A G V
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIAYQPYGKSV- 523
Query: 597 INGDVYSYGILLLELMTRKRP-----SDIMFEGNMNLHNFA 632
D +++G+LL E++ + P D +F+ M HN A
Sbjct: 524 ---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-HNVA 560
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 219
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 220 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFGLAK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 427 IIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
I + L+ G S+ I E + LR IRH N I+T+ + K D L+ E +
Sbjct: 37 FIKKRRLSSSRRGVSREEIEREVNILREIRHPN---IITLHDIFENKTD--VVLILELVS 91
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G L ++L +++ + FL++I +D + YLH AH DLKP N
Sbjct: 92 GGELFDFL----AEKESLTEDEATQFLKQI---LD---GVHYLH---SKRIAHFDLKPEN 138
Query: 546 V-LLDHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDV 601
+ LLD + + DFG+A + + + GT ++AP E + + D+
Sbjct: 139 IMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAP-EIVNYEPLGLEADM 194
Query: 602 YSYGILLLELMTRKRP 617
+S G++ L++ P
Sbjct: 195 WSIGVITYILLSGASP 210
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 427 IIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
I + L+ G S+ I E + LR IRH N I+T+ + K D L+ E +
Sbjct: 44 FIKKRRLSSSRRGVSREEIEREVNILREIRHPN---IITLHDIFENKTD--VVLILELVS 98
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G L ++L +++ + FL++I +D + YLH AH DLKP N
Sbjct: 99 GGELFDFL----AEKESLTEDEATQFLKQI---LD---GVHYLH---SKRIAHFDLKPEN 145
Query: 546 V-LLDHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDV 601
+ LLD + + DFG+A + + + GT ++AP E + + D+
Sbjct: 146 IMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAP-EIVNYEPLGLEADM 201
Query: 602 YSYGILLLELMTRKRP 617
+S G++ L++ P
Sbjct: 202 WSIGVITYILLSGASP 217
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 219
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 220 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 252
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 540 DLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---AEYGLGSEVS 596
DLK NV+LD E +ADFG+ K + T GT YIAP A G V
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFC--GTPDYIAPEIIAYQPYGKSV- 202
Query: 597 INGDVYSYGILLLELMTRKRP-----SDIMFEGNMNLHNFA 632
D +++G+LL E++ + P D +F+ M HN A
Sbjct: 203 ---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-HNVA 239
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 94/242 (38%), Gaps = 59/242 (24%)
Query: 411 GSFGSVYK---GILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK--NLVKILTV 465
G F VY+ +L EG +NL+ I E +IR + V++L
Sbjct: 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQ 66
Query: 466 CSG--------VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
C G ++ +D LV+E M GS+ +H + N L+ +
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH----------KRRHFNELEASVV 116
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLA------------ 562
DVA AL +LH+ AH DLKP N+L +H + DFGL
Sbjct: 117 VQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Query: 563 ---KLLPPAHLQTSSIGVKGTIGYIAPAEY-GLGSEVSI---NGDVYSYGILLLELMTRK 615
+LL P G+ Y+AP E SI D++S G++L L++
Sbjct: 174 STPELLTPC----------GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223
Query: 616 RP 617
P
Sbjct: 224 PP 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
I G+F V + + + A+K++N +L G E L N + + ++
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHF 128
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
++ +++ LV E+ G L L +S + + A +L I +AID
Sbjct: 129 A-----FQDENYLYLVMEYYVGGDL---LTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYI 584
L Y+H D +KP N+LLD +ADFG L S + V GT Y+
Sbjct: 181 LGYVHRD---------IKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYL 230
Query: 585 AP 586
+P
Sbjct: 231 SP 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 28/184 (15%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKA-LVYEFMHNGSLEEWLHPVSGADKTVEA 505
E LR +RHKN+++++ V Y + K +V E+ G ++E L V
Sbjct: 56 EIQLLRRLRHKNVIQLVDVL----YNEEKQKMYMVMEYCVCG-MQEMLDSVP----EKRF 106
Query: 506 PKCLN---FLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLA 562
P C F Q I+ L+YLH H D+KP N+LL T ++ G+A
Sbjct: 107 PVCQAHGYFCQLID-------GLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVA 156
Query: 563 KLLPPAHLQTSSIGVKGTIGYIAPA-EYGLGSEVSINGDVYSYGILLLELMTRKRPSDIM 621
+ L P + +G+ + P GL + D++S G+ L + T P
Sbjct: 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP---- 212
Query: 622 FEGN 625
FEG+
Sbjct: 213 FEGD 216
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 89 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 133
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 134 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 189
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y + D++S G + ++ RK P F G+ N
Sbjct: 190 SRYFKGPELLVDLQDY------DYSLDMWSLGCMFAGMIFRKEP---FFYGHDN 234
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 132 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 188 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 232
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 132 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 188 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 232
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 107/261 (40%), Gaps = 44/261 (16%)
Query: 402 FLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG-----ASKSSIAECSALRNIRH 456
+ L I G V++ +L+E K I A+K +NL + ++ IA + L+ +H
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 114
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLE--EWLHPVSGADKTVEAPKCLNFLQR 514
+ KI+ + DY+ D +Y M G+++ WL + K ++ +R
Sbjct: 115 SD--KIIRL---YDYEITD--QYIYMVMECGNIDLNSWL----------KKKKSIDPWER 157
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
+ ++ A+ +H Q H DLKP+N L+ M + DFG+A + P
Sbjct: 158 KSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVK 213
Query: 575 IGVKGTIGYIAPAEYGLGSEVSING----------DVYSYGILLLELMTRKRPSDIMFEG 624
G + Y+ P S NG DV+S G +L + K P +
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
Query: 625 NMNLHNFARTVLPDHVMDIVD 645
LH + P+H ++ D
Sbjct: 274 ISKLHAI---IDPNHEIEFPD 291
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 88 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 132
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 133 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 189 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 233
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 427 IIAVKVLNLLHHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMH 485
I + L G S+ I E + LR IRH N I+T+ + K D L+ E +
Sbjct: 58 FIKKRRLXSSRRGVSREEIEREVNILREIRHPN---IITLHDIFENKTD--VVLILELVS 112
Query: 486 NGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSN 545
G L ++L +++ + FL++I +D + YLH AH DLKP N
Sbjct: 113 GGELFDFL----AEKESLTEDEATQFLKQI---LD---GVHYLH---SKRIAHFDLKPEN 159
Query: 546 V-LLDHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDV 601
+ LLD + + DFG+A + + + GT ++AP E + + D+
Sbjct: 160 IMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAP-EIVNYEPLGLEADM 215
Query: 602 YSYGILLLELMTRKRP 617
+S G++ L++ P
Sbjct: 216 WSIGVITYILLSGASP 231
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 132 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 188 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 232
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 88 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 132
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 133 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 189 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 233
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 132 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y + D++S G + ++ RK P F G+ N
Sbjct: 188 SRYFKGPELLVDLQDY------DYSLDMWSLGCMFAGMIFRKEP---FFYGHDN 232
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 132 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 188 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 232
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 87 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 131
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 132 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y D++S G + ++ RK P F G+ N
Sbjct: 188 SRYFKGPELLVDLQDYDYSL------DMWSLGCMFAGMIFRKEP---FFYGHDN 232
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 458 NLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
N+VK+L + K +L++E+++N D V P ++ R I
Sbjct: 108 NIVKLLDIVRDQHSKT---PSLIFEYVNN------------TDFKVLYPTLTDYDIRYYI 152
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTA-HVADFGLAKLLPPA---HLQTS 573
++ AL Y H H D+KP NV++DHE+ + D+GLA+ P +++ +
Sbjct: 153 -YELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 208
Query: 574 SIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMN 627
S KG + +Y + D++S G + ++ RK P F G+ N
Sbjct: 209 SRYFKGPELLVDLQDY------DYSLDMWSLGCMFAGMIFRKEP---FFYGHDN 253
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 32/210 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSA--LRNIRHKNLVKILTVCSG 468
G+F V + + A K++N A E A R ++H N+V++ S
Sbjct: 42 GAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 101
Query: 469 VDYKGDDFKALVYEFMHNGSLEEWL---HPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
+ F LV++ + G L E + S AD A C++ + L
Sbjct: 102 -----EGFHYLVFDLVTGGELFEDIVAREYYSEAD----ASHCIHQI------------L 140
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAHLQTSSIGVKGTIG 582
+ ++H Q H DLKP N+LL + +ADFGLA + Q + G GT G
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPG 198
Query: 583 YIAPAEYGLGSEVSINGDVYSYGILLLELM 612
Y++P E D+++ G++L L+
Sbjct: 199 YLSP-EVLRKDPYGKPVDIWACGVILYILL 227
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPAFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S LR + H N++ + V Y+ L+ E + G L ++L
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-- 106
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEM-T 553
+++ + +F+++I +D + YLH AH DLKP N+ LLD +
Sbjct: 107 --AQKESLSEEEATSFIKQI---LD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 554 AHVA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
H+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 156 PHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 211
Query: 612 MTRKRP 617
++ P
Sbjct: 212 LSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S LR + H N++ + V Y+ L+ E + G L ++L
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-- 106
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEM-T 553
+++ + +F+++I +D + YLH AH DLKP N+ LLD +
Sbjct: 107 --AQKESLSEEEATSFIKQI---LD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPI 155
Query: 554 AHVA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
H+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 156 PHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 211
Query: 612 MTRKRP 617
++ P
Sbjct: 212 LSGASP 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 439 GASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS 497
G S+ I E S LR + H N++ + V Y+ L+ E + G L ++L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL---- 106
Query: 498 GADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEM-TAH 555
+++ + +F+++I +D + YLH AH DLKP N+ LLD + H
Sbjct: 107 AQKESLSEEEATSFIKQI---LD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 556 VA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFGLA + + GT ++AP E + + D++S G++ L++
Sbjct: 158 IKLIDFGLAHEIEDG---VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLS 213
Query: 614 RKRP 617
P
Sbjct: 214 GASP 217
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ ++
Sbjct: 199 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYQM 231
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXL 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E L + D ++ G+L+ E+
Sbjct: 200 CGTPEYLAP-EIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H D+KP N+L+ + A++ DFG+A L T GT+ Y AP + S +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKL-TQLGNTVGTLYYXAPERFSE-SHATY 214
Query: 598 NGDVYSYGILLLELMTRKRP 617
D+Y+ +L E +T P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 439 GASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS 497
G S+ I E S LR + H N++ + V Y+ L+ E + G L ++L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL---- 106
Query: 498 GADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEM-TAH 555
+++ + +F+++I +D + YLH AH DLKP N+ LLD + H
Sbjct: 107 AQKESLSEEEATSFIKQI---LD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 556 VA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFGLA + + GT ++AP E + + D++S G++ L++
Sbjct: 158 IKLIDFGLAHEIEDG---VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLS 213
Query: 614 RKRP 617
P
Sbjct: 214 GASP 217
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 32/213 (15%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGV 469
GSF K + + AVK+++ ++ I +AL+ H N+VK+ V
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEI---TALKLCEGHPNIVKLHEV---- 74
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+ LV E ++ G L E ++ K + + I + A+ ++H
Sbjct: 75 -FHDQLHTFLVMELLNGGELFE----------RIKKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 530 HDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAKLLPPAH--LQTSSIGVKGTIGYI 584
H DLKP N+L E + + DFG A+L PP + L+T T+ Y
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF----TLHYA 176
Query: 585 APAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
AP E + + D++S G++L +++ + P
Sbjct: 177 AP-ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 27/184 (14%)
Query: 439 GASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVS 497
G S+ I E S LR + H N++ + V Y+ L+ E + G L ++L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL---- 106
Query: 498 GADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEM-TAH 555
+++ + +F+++I +D + YLH AH DLKP N+ LLD + H
Sbjct: 107 AQKESLSEEEATSFIKQI---LD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 556 VA--DFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ DFGLA + + GT ++AP E + + D++S G++ L++
Sbjct: 158 IKLIDFGLAHEIEDG---VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLS 213
Query: 614 RKRP 617
P
Sbjct: 214 GASP 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 16/126 (12%)
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDH---EMTAHVADFGLAKLLPPAHLQTSSIGVKGT 580
A+ YLH + H DLKP N+L + +ADFGL+K++ L + V GT
Sbjct: 160 AVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT---VCGT 213
Query: 581 IGYIAPAEYGLGSEVSINGDVYSYGILL------LELMTRKRPSDIMFEGNMNLHNFART 634
GY AP E G D++S GI+ E +R MF +N + +
Sbjct: 214 PGYCAP-EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFIS 272
Query: 635 VLPDHV 640
D V
Sbjct: 273 PWWDEV 278
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 167 NIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSL 226
NI +I L +LYL N L +P+ + +L ++LS+N L+ ++P +L L
Sbjct: 238 NISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQL 295
Query: 227 SVGLDLSRNQLVGSLPTEVGKLINLEILFISRNMLECEILSTL 269
+ +V +LP E G L NL+ L + N LE + L L
Sbjct: 296 KYFYFF--DNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 515 INIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSS 574
I+ + VA +++L H DL N+LL + DFGLA+ +
Sbjct: 202 ISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 575 IGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
+ + ++AP E S DV+SYG+LL E+ +
Sbjct: 259 GDTRLPLKWMAP-ESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H DL N+LL + + DFGLA+ + + + ++AP E +I
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTI 274
Query: 598 NGDVYSYGILLLELMT 613
DV+S+G+LL E+ +
Sbjct: 275 QSDVWSFGVLLWEIFS 290
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 411 GSFGSVYKGILDEGKTI---IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V IL + K AVKV++ + +S + E L+ + H N++K+
Sbjct: 43 GSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
++ + LV E G L D+ + + K + + I V
Sbjct: 100 F-----FEDKGYFYLVGEVYTGGEL---------FDEII-SRKRFSEVDAARIIRQVLSG 144
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+ Y+H + H DLKP N+LL+ + + DFGL+ + I GT
Sbjct: 145 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTA 198
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
YIAP L DV+S G++L L++
Sbjct: 199 YYIAPE--VLHGTYDEKCDVWSTGVILYILLS 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H DL N+LL + + DFGLA+ + + + ++AP E +I
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTI 279
Query: 598 NGDVYSYGILLLELMT 613
DV+S+G+LL E+ +
Sbjct: 280 QSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H DL N+LL + + DFGLA+ + + + ++AP E +I
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTI 272
Query: 598 NGDVYSYGILLLELMT 613
DV+S+G+LL E+ +
Sbjct: 273 QSDVWSFGVLLWEIFS 288
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+++D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT Y+AP E + + D ++ G+L+ E+
Sbjct: 199 CGTPEYLAP-EIIISKGYNKAVDWWALGVLIYEM 231
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G+ +V++G + + A+KV N + + E L+ + HKN+VK+ +
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET 79
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+ K L+ EF GSL L S A E+ + + DV + +L
Sbjct: 80 TTR---HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-------VLRDVVGGMNHLR 129
Query: 530 HDCQPTTAHCDLKPSNVLL----DHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
+ H ++KP N++ D + + DFG A+ L + + GT Y+
Sbjct: 130 ENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVSLYGTEEYLH 183
Query: 586 PAEY 589
P Y
Sbjct: 184 PDMY 187
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Query: 538 HCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSI 597
H DL N+LL + + DFGLA+ + + + ++AP E +I
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP-ETIFDRVYTI 281
Query: 598 NGDVYSYGILLLELMT 613
DV+S+G+LL E+ +
Sbjct: 282 QSDVWSFGVLLWEIFS 297
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 110
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK--LLPPAHLQTS 573
++ AL+YLH + D+K N++LD + + DFGL K + A ++T
Sbjct: 111 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 165
Query: 574 SIGVKGTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT Y+AP +YG D + G+++ E+M + P
Sbjct: 166 C----GTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 104
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 105 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 153
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 154 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 209
Query: 612 MTRKRP 617
++ P
Sbjct: 210 LSGASP 215
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 110
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK--LLPPAHLQTS 573
++ AL+YLH + D+K N++LD + + DFGL K + A ++T
Sbjct: 111 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 165
Query: 574 SIGVKGTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT Y+AP +YG D + G+++ E+M + P
Sbjct: 166 C----GTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 104
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 105 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 153
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 154 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 209
Query: 612 MTRKRP 617
++ P
Sbjct: 210 LSGASP 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHH-GASKSSIAECSALRNIRHKNLVKILTVCSGV 469
G+ +V++G + + A+KV N + + E L+ + HKN+VK+ +
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET 79
Query: 470 DYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLH 529
+ K L+ EF GSL L S A E+ + + + DV + +L
Sbjct: 80 TTR---HKVLIMEFCPCGSLYTVLEEPSNAYGLPES-------EFLIVLRDVVGGMNHLR 129
Query: 530 HDCQPTTAHCDLKPSNVLL----DHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
+ H ++KP N++ D + + DFG A+ L + + GT Y+
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED---DEQFVXLYGTEEYLH 183
Query: 586 PAEY 589
P Y
Sbjct: 184 PDMY 187
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILILELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 152 EFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H + + + +
Sbjct: 210 HPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFH--------LSRERVFSEDRAR 254
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK--LLPPAHLQTS 573
++ AL YLH + + DLK N++LD + + DFGL K + A ++T
Sbjct: 255 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 312
Query: 574 SIGVKGTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT Y+AP +YG D + G+++ E+M + P
Sbjct: 313 C----GTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 351
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 9 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 67 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 113
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK--LLPPAHLQTS 573
++ AL+YLH + D+K N++LD + + DFGL K + A ++T
Sbjct: 114 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 168
Query: 574 SIGVKGTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT Y+AP +YG D + G+++ E+M + P
Sbjct: 169 C----GTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 207
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 149 EFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H + + + +
Sbjct: 207 HPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFH--------LSRERVFSEDRAR 251
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK--LLPPAHLQTS 573
++ AL YLH + + DLK N++LD + + DFGL K + A ++T
Sbjct: 252 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 309
Query: 574 SIGVKGTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
GT Y+AP +YG D + G+++ E+M + P
Sbjct: 310 C----GTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 348
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 411 GSFGSVYKGILDEGKTI---IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V IL + K AVKV++ + +S + E L+ + H N++K+
Sbjct: 37 GSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
++ + LV E G L D+ + + K + + I V
Sbjct: 94 F-----FEDKGYFYLVGEVYTGGEL---------FDEII-SRKRFSEVDAARIIRQVLSG 138
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+ Y+H + H DLKP N+LL+ + + DFGL+ + I GT
Sbjct: 139 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTA 192
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
YIAP L DV+S G++L L++
Sbjct: 193 YYIAPE--VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 30/259 (11%)
Query: 20 LPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQ 79
LP+L +LSL +N I + P S + S L + V + Q +
Sbjct: 271 LPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWL-K 329
Query: 80 HLKHLDINNNN--------FGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQ 131
+L++L++++NN F GL+ + S T +L +N+ F S+ L
Sbjct: 330 YLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSP-----LL 384
Query: 132 TLHMWDNQLS----GTISPAIGELQNLVTLAIN--TNKLSGNIPPSIGNLKKLLQLYLIE 185
TL++ N +S GT S +G+L+ ++ L +N KLSG L+ + ++YL
Sbjct: 385 TLNLTKNHISKIANGTFS-WLGQLR-ILDLGLNEIEQKLSGQ---EWRGLRNIFEIYLSY 439
Query: 186 N-FLQVSIPSSLGQCQSLTTINLSYNNLSGT--IPPQLMDLTSLSVGLDLSRNQLVGSLP 242
N +LQ+S SS SL + L L P L +L++ LDLS N +
Sbjct: 440 NKYLQLST-SSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTI-LDLSNNNIANINE 497
Query: 243 TEVGKLINLEILFISRNML 261
+ L NLEIL N L
Sbjct: 498 DLLEGLENLEILDFQHNNL 516
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL------DHEMTAHVADFGLAKLLPPAH 569
I+ + L Y+H C H D+KP NVL+ ++ + +AD G A +
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 570 LQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629
T+SI T Y +P E LG+ D++S L+ EL+T D +FE + H
Sbjct: 193 --TNSI---QTREYRSP-EVLLGAPWGCGADIWSTACLIFELIT----GDFLFEPDEG-H 241
Query: 630 NFARTVLPDHVMDIVD 645
++ + DH+ I++
Sbjct: 242 SYTKD--DDHIAQIIE 255
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ D + +V E+M G L ++ +S D V + + +A+D ++ ++H
Sbjct: 143 FQDDRYLYMVMEYMPGGDL---VNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---A 587
D +KP N+LLD +ADFG + + V GT YI+P
Sbjct: 198 D---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLK 247
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G D +S G+ L E++ P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ D + +V E+M G L ++ +S D V + + +A+D ++ ++H
Sbjct: 138 FQDDRYLYMVMEYMPGGDL---VNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIHR 192
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---A 587
D +KP N+LLD +ADFG + + V GT YI+P
Sbjct: 193 D---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLK 242
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G D +S G+ L E++ P
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ D + +V E+M G L ++ +S D V + + +A+D ++ ++H
Sbjct: 143 FQDDRYLYMVMEYMPGGDL---VNLMSNYD--VPEKWARFYTAEVVLALDAIHSMGFIHR 197
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---A 587
D +KP N+LLD +ADFG + + V GT YI+P
Sbjct: 198 D---------VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLK 247
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G D +S G+ L E++ P
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL------DHEMTAHVADFGLAKLLPPAH 569
I+ + L Y+H C H D+KP NVL+ ++ + +AD G A +
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 570 LQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGNMNLH 629
T+SI T Y +P E LG+ D++S L+ EL+T D +FE + H
Sbjct: 193 --TNSI---QTREYRSP-EVLLGAPWGCGADIWSTACLIFELIT----GDFLFEPDEG-H 241
Query: 630 NFARTVLPDHVMDIVD 645
++ + DH+ I++
Sbjct: 242 SYTKD--DDHIAQIIE 255
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 521 VACALKYLHHDCQPTTAHCDLKPSNVLLD-HEMTA--HVADFGLAKLLPPAHLQTSSIGV 577
V + YLH + H DLKP N+LL+ E A + DFGL+ + +
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-- 199
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
GT YIAP L + DV+S G++L L+
Sbjct: 200 -GTAYYIAPE--VLRKKYDEKCDVWSIGVILFILLA 232
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 31/159 (19%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI----- 454
F L I G FGSV+K + I A+K G S+ E +ALR +
Sbjct: 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG----SVDEQNALREVYAHAV 66
Query: 455 --RHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFL 512
+H ++V+ + + DD + E+ + GSL AD E + +++
Sbjct: 67 LGQHSHVVRYFSA-----WAEDDHMLIQNEYCNGGSL---------ADAISENYRIMSYF 112
Query: 513 QRI---NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLL 548
+ ++ + V L+Y+H + H D+KPSN+ +
Sbjct: 113 KEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 18/150 (12%)
Query: 471 YKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKYLHH 530
++ D + +V E+M G L ++ +S D + K + + +A+D ++ +H
Sbjct: 144 FQDDKYLYMVMEYMPGGDL---VNLMSNYDVPEKWAKF--YTAEVVLALDAIHSMGLIHR 198
Query: 531 DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP---A 587
D +KP N+LLD +ADFG + + V GT YI+P
Sbjct: 199 D---------VKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLK 248
Query: 588 EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G D +S G+ L E++ P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 93/242 (38%), Gaps = 59/242 (24%)
Query: 411 GSFGSVYK---GILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHK--NLVKILTV 465
G F VY+ +L EG +NL+ I E +IR + V++L
Sbjct: 8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQ 66
Query: 466 CSG--------VDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINI 517
C G ++ +D LV+E M GS+ +H + N L+ +
Sbjct: 67 CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH----------KRRHFNELEASVV 116
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLA------------ 562
DVA AL +LH+ AH DLKP N+L +H + DF L
Sbjct: 117 VQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173
Query: 563 ---KLLPPAHLQTSSIGVKGTIGYIAPAEY-GLGSEVSI---NGDVYSYGILLLELMTRK 615
+LL P G+ Y+AP E SI D++S G++L L++
Sbjct: 174 STPELLTPC----------GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223
Query: 616 RP 617
P
Sbjct: 224 PP 225
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI----- 454
F L I G FGSV+K + I A+K G S+ E +ALR +
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG----SVDEQNALREVYAHAV 64
Query: 455 --RHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFL 512
+H ++V+ + + DD + E+ + GSL AD E + +++
Sbjct: 65 LGQHSHVVRYFSA-----WAEDDHMLIQNEYCNGGSL---------ADAISENYRIMSYF 110
Query: 513 QRINIA---IDVACALKYLHHDCQPTTAHCDLKPSNVLL 548
+ + + V L+Y+H + H D+KPSN+ +
Sbjct: 111 KEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 411 GSFGSVYKGILDEGKTI---IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V IL + K AVKV++ + +S + E L+ + H N++K+
Sbjct: 60 GSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
++ + LV E G L D+ + + K + + I V
Sbjct: 117 F-----FEDKGYFYLVGEVYTGGEL---------FDEII-SRKRFSEVDAARIIRQVLSG 161
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+ Y+H + H DLKP N+LL+ + + DFGL+ + I GT
Sbjct: 162 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTA 215
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
YIAP L DV+S G++L L++
Sbjct: 216 YYIAPEV--LHGTYDEKCDVWSTGVILYILLS 245
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI----- 454
F L I G FGSV+K + I A+K G S+ E +ALR +
Sbjct: 7 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG----SVDEQNALREVYAHAV 62
Query: 455 --RHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFL 512
+H ++V+ + + DD + E+ + GSL AD E + +++
Sbjct: 63 LGQHSHVVRYFSA-----WAEDDHMLIQNEYCNGGSL---------ADAISENYRIMSYF 108
Query: 513 QRINIA---IDVACALKYLHHDCQPTTAHCDLKPSNVLL 548
+ + + V L+Y+H + H D+KPSN+ +
Sbjct: 109 KEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 411 GSFGSVYKGILDEGKTI---IAVKVLN---LLHHGASKSSIAECSALRNIRHKNLVKILT 464
GSFG V IL + K AVKV++ + +S + E L+ + H N++K+
Sbjct: 61 GSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 465 VCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACA 524
++ + LV E G L D+ + + K + + I V
Sbjct: 118 F-----FEDKGYFYLVGEVYTGGEL---------FDEII-SRKRFSEVDAARIIRQVLSG 162
Query: 525 LKYLHHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPAHLQTSSIGVKGTI 581
+ Y+H + H DLKP N+LL+ + + DFGL+ + I GT
Sbjct: 163 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI---GTA 216
Query: 582 GYIAPAEYGLGSEVSINGDVYSYGILLLELMT 613
YIAP L DV+S G++L L++
Sbjct: 217 YYIAPEV--LHGTYDEKCDVWSTGVILYILLS 246
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 520 DVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKG 579
++ AL++LH + + D+K N+LLD + DFGL+K A + G
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCG 222
Query: 580 TIGYIAPA-EYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFEGN 625
TI Y+AP G S D +S G+L+ EL+T P + E N
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN 269
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 27/186 (14%)
Query: 437 HHGASKSSIA-ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHP 495
G S+ I E S L+ I+H N++ + V Y+ L+ E + G L ++L
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEV-----YENKTDVILIGELVAGGELFDFL-- 105
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEMTA 554
+++ + FL++I + Y H Q AH DLKP N+ LLD +
Sbjct: 106 --AEKESLTEEEATEFLKQILNGV-------YYLHSLQ--IAHFDLKPENIMLLDRNVPK 154
Query: 555 ---HVADFGLAKLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
+ DFGLA + + GT ++AP E + + D++S G++ L
Sbjct: 155 PRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYIL 210
Query: 612 MTRKRP 617
++ P
Sbjct: 211 LSGASP 216
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 31/159 (19%)
Query: 400 VSFLFLCWIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNI----- 454
F L I G FGSV+K + I A+K G S+ E +ALR +
Sbjct: 9 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG----SVDEQNALREVYAHAV 64
Query: 455 --RHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFL 512
+H ++V+ + + DD + E+ + GSL AD E + +++
Sbjct: 65 LGQHSHVVRYFSA-----WAEDDHMLIQNEYCNGGSL---------ADAISENYRIMSYF 110
Query: 513 QRINIA---IDVACALKYLHHDCQPTTAHCDLKPSNVLL 548
+ + + V L+Y+H + H D+KPSN+ +
Sbjct: 111 KEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 538 HCDLKPSNVLLDH-----EMTAHVADFGLAKLLPPA-HLQTSSIGVKGTIGYIAP 586
H DLKP N+L+ ++ A ++DFGL K L H + GV GT G+IAP
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 445 IAECSALRNIRHKNLVKILTVCSGVDYKG---------DDFKALVYEFMHNGSLEEWLHP 495
+E + + K+ +K +DY G +FK Y FM L L
Sbjct: 81 FSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQK 140
Query: 496 VSGADKTVEAPKCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAH 555
+SG + T + L R+ +DV L+Y+H + H D+K +N+LL ++
Sbjct: 141 ISGQNGTFKKSTVLQLGIRM---LDV---LEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191
Query: 556 V--ADFGLAKLLPP-----AHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILL 608
V AD+GL+ P + + G GTI + + + G +S DV G +
Sbjct: 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK-GVALSRRSDVEILGYCM 250
Query: 609 LELMTRKRPSD 619
L + K P +
Sbjct: 251 LRWLCGKLPWE 261
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 15/101 (14%)
Query: 524 ALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK---------LLPPAHLQTSS 574
AL Y+H H +LKP N+ +D + DFGLAK L +L SS
Sbjct: 128 ALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 575 IGVKGTIG---YIAPAEYGLGSEVSINGDVYSYGILLLELM 612
+ IG Y+A + D YS GI+ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 519 IDVACALK-------YLHHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPA 568
+D A +K YLH + H DLKP N+LL+ + + DFGL+ A
Sbjct: 121 VDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-----A 172
Query: 569 HLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFE 623
H + +G K GT YIAP L + DV+S G++L L+ P F
Sbjct: 173 HFE---VGGKMKERLGTAYYIAPE--VLRKKYDEKCDVWSCGVILYILLCGYPP----FG 223
Query: 624 GNMNLHNFARTVLPDHVMDIVDSTLLADD 652
G + R D D T ++D+
Sbjct: 224 GQTDQEILKRVEKGKFSFDPPDWTQVSDE 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 110
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL+YLH + D+K N++LD + + DFGL K + S
Sbjct: 111 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISD 158
Query: 576 GVK-----GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G GT Y+AP +YG D + G+++ E+M + P
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 110
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL+YLH + D+K N++LD + + DFGL K + S
Sbjct: 111 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISD 158
Query: 576 GVK-----GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G GT Y+AP +YG D + G+++ E+M + P
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 6 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 64 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 110
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL+YLH + D+K N++LD + + DFGL K + S
Sbjct: 111 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISD 158
Query: 576 GVK-----GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G GT Y+AP +YG D + G+++ E+M + P
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 518 AIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGV 577
A + +YLH + DLKP N+L+D + V DFG AK ++ + +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXL 198
Query: 578 KGTIGYIAPAEYGLGSEVSINGDVYSYGILLLEL 611
GT +AP E L + D ++ G+L+ E+
Sbjct: 199 CGTPEALAP-EIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 146 PAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTI 205
P + L L L ++ N LS P S L L +L++I++ +QV ++ QSL I
Sbjct: 201 PNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260
Query: 206 NLSYNNLS 213
NL++NNL+
Sbjct: 261 NLAHNNLT 268
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 4/115 (3%)
Query: 95 LPGCICNFSITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLSGTISPAIGELQN 153
LP + + L+ L+ N++ +S+P G+ K NL L+++ NQL +L N
Sbjct: 100 LPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTN 158
Query: 154 LVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQCQSLTTINL 207
L L ++ N+L L +L QL L +N L+ S+P + + SLT I L
Sbjct: 159 LTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDRLTSLTHIWL 212
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 122 AGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQL 181
+ + + NL L + NQL + +L NL L + N+L L L L
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 182 YLIENFLQVSIPSSLGQCQSLTTINLSYNNLSGTIPPQLMDLTSLSVGLDLSRNQLVGSL 241
YL N LQ + +LT ++L N L ++P + D + L L+ NQL S+
Sbjct: 139 YLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQL-KSV 196
Query: 242 PTEV-GKLINLEILFISRNMLEC 263
P V +L +L +++ N +C
Sbjct: 197 PDGVFDRLTSLTHIWLLNNPWDC 219
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 106 LETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKL 164
L LI N++ +S+P G+ K NL+ L + +NQL +L NL L + N+L
Sbjct: 87 LTYLILTGNQL-QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQL 145
Query: 165 SGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQCQSLTTINLSYNNLSGTIPPQLMD- 222
L L +L L N LQ S+P + + L ++L+ N L ++P + D
Sbjct: 146 QSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFDR 203
Query: 223 LTSLS 227
LTSL+
Sbjct: 204 LTSLT 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 48/232 (20%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 11 DFDYLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H T E +
Sbjct: 69 HPFLTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY------ 115
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL+YLH + D+K N++LD + + DFGL K + S
Sbjct: 116 --GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------EGISD 163
Query: 576 GVK-----GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G GT Y+AP +YG D + G+++ E+M + P
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 209
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E S LR + H N++ + V Y+ L+ E + G L ++L +++
Sbjct: 65 EVSILRQVLHPNIITLHDV-----YENRTDVVLILELVSGGELFDFL----AQKESLSEE 115
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNV-LLDHEM-TAHVA--DFGLA 562
+ +F+++I +D + YLH AH DLKP N+ LLD + H+ DFGLA
Sbjct: 116 EATSFIKQI---LD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Query: 563 KLLPPAHLQTSSIGVKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRP 617
+ + GT ++AP E + + D++S G++ L++ P
Sbjct: 167 HEIEDG---VEFKNIFGTPEFVAP-EIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 411 GSFGSVYKGIL--DEGKTI-IAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKILTVC 466
G FG VY+G+ +G+ I +AVK +K ++E ++N+ H ++VK++ +
Sbjct: 35 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 94
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
++ ++ E G L +L + L L + ++ + A+
Sbjct: 95 E------EEPTWIIMELYPYGELGHYLERNKNS---------LKVLTLVLYSLQICKAMA 139
Query: 527 YLHH-DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL +C H D+ N+L+ + DFGL++ + +S+ + I +++
Sbjct: 140 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMS 194
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
P + DV+ + + + E+++
Sbjct: 195 PESINF-RRFTTASDVWMFAVCMWEILS 221
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 30/169 (17%)
Query: 451 LRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLN 510
L + H ++V+I D GD +V E++ SL+ S K L
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR-----SKGQK-------LP 180
Query: 511 FLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHL 570
+ I +++ AL YLH + DLKP N++L E + D G A
Sbjct: 181 VAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLI-DLG-------AVS 229
Query: 571 QTSSIG-VKGTIGYIAPAEYGLGSEVSINGDVYSYG----ILLLELMTR 614
+ +S G + GT G+ AP G V+ D+Y+ G L L+L TR
Sbjct: 230 RINSFGYLYGTPGFQAPEIVRTGPTVAT--DIYTVGRTLAALTLDLPTR 276
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 67 KATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGK 126
+A + C C+ +D + + + G T + L N+I + P +
Sbjct: 5 RARGSACPSQCSCSGTTVDCSGKSLASVPTG----IPTTTQVLYLYDNQITKLEPGVFDR 60
Query: 127 FINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIEN 186
L L + +NQL+ + +L L L++N N+L + NLK L ++L+ N
Sbjct: 61 LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 120
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 113 SNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSI 172
S K S+P GI Q L+++DNQ++ L L L ++ N+L+
Sbjct: 25 SGKSLASVPTGIPT--TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF 82
Query: 173 GNLKKLLQLYLIENFLQVSIP-SSLGQCQSLTTINLSYN 210
L +L QL L +N L+ SIP + +SLT I L N
Sbjct: 83 DKLTQLTQLSLNDNQLK-SIPRGAFDNLKSLTHIWLLNN 120
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 86/221 (38%), Gaps = 30/221 (13%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIRHKNLVKILTVCS 467
I G FG VY G G+ I + + + K+ E A R RH+N+V + C
Sbjct: 41 IGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 468 GVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
+ A++ + L+ V K V L+ + IA ++ + Y
Sbjct: 100 SPPH-----LAIITSLCKGRT----LYSVVRDAKIV-----LDVNKTRQIAQEIVKGMGY 145
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGL---AKLLPPAHLQTSSIGVKGTIGYI 584
LH H DLK NV D+ + DFGL + +L + G + ++
Sbjct: 146 LH---AKGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHL 201
Query: 585 APA---EYGLGSE-----VSINGDVYSYGILLLELMTRKRP 617
AP + +E S + DV++ G + EL R+ P
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 37/245 (15%)
Query: 1 SDVGVNRVQGGIPLDFGF-----------------TLPNLLFLSLGFNQITGVIPSSMFN 43
SD+G+ +V +P D L NL L L N+I+ + P +
Sbjct: 39 SDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP 98
Query: 44 ASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQN-------------CNQHL-KHLDINNN 89
KLE ++ N L E+P + K + V NQ + L N
Sbjct: 99 LVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 90 NFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIG 149
G+ G I ++N +IP G+ +L LH+ N+++ + ++
Sbjct: 158 KSSGIENGAFQGMKKLSYIRIADTN--ITTIPQGLPP--SLTELHLDGNKITKVDAASLK 213
Query: 150 ELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSY 209
L NL L ++ N +S S+ N L +L+L N L V +P L + + + L
Sbjct: 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHN 272
Query: 210 NNLSG 214
NN+S
Sbjct: 273 NNISA 277
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Query: 84 LDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT 143
LD+ NN + G N L TLI +NKI + P + L+ L++ NQL
Sbjct: 57 LDLQNNKITEIKDGDFKNLK-NLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL 115
Query: 144 ISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVS-IPSSLGQ-CQS 201
LQ L ++ N+++ L +++ + L N L+ S I + Q +
Sbjct: 116 PEKMPKTLQ---ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172
Query: 202 LTTINLSYNNLSGT---IPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISR 258
L+ I ++ N++ +PP L + L L N++ + L NL L +S
Sbjct: 173 LSYIRIADTNITTIPQGLPPSLTE-------LHLDGNKITKVDAASLKGLNNLAKLGLSF 225
Query: 259 NMLECEILSTLGSCIKLEQLKLGGN 283
N + +L + L +L L N
Sbjct: 226 NSISAVDNGSLANTPHLRELHLNNN 250
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 37/245 (15%)
Query: 1 SDVGVNRVQGGIPLDFGF-----------------TLPNLLFLSLGFNQITGVIPSSMFN 43
SD+G+ +V +P D L NL L L N+I+ + P +
Sbjct: 39 SDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP 98
Query: 44 ASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQN-------------CNQHL-KHLDINNN 89
KLE ++ N L E+P + K + V NQ + L N
Sbjct: 99 LVKLERLYLSKNQLK-ELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 90 NFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIG 149
G+ G I ++N +IP G+ +L LH+ N+++ + ++
Sbjct: 158 KSSGIENGAFQGMKKLSYIRIADTN--ITTIPQGLPP--SLTELHLDGNKITKVDAASLK 213
Query: 150 ELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSY 209
L NL L ++ N +S S+ N L +L+L N L V +P L + + + L
Sbjct: 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHN 272
Query: 210 NNLSG 214
NN+S
Sbjct: 273 NNISA 277
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Query: 84 LDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGT 143
LD+ NN + G N L TLI +NKI + P + L+ L++ NQL
Sbjct: 57 LDLQNNKITEIKDGDFKNLK-NLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL 115
Query: 144 ISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVS-IPSSLGQ-CQS 201
LQ L ++ N+++ L +++ + L N L+ S I + Q +
Sbjct: 116 PEKMPKTLQ---ELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172
Query: 202 LTTINLSYNNLSGT---IPPQLMDLTSLSVGLDLSRNQLVGSLPTEVGKLINLEILFISR 258
L+ I ++ N++ +PP L + L L N++ + L NL L +S
Sbjct: 173 LSYIRIADTNITTIPQGLPPSLTE-------LHLDGNKITKVDAASLKGLNNLAKLGLSF 225
Query: 259 NMLECEILSTLGSCIKLEQLKLGGN 283
N + +L + L +L L N
Sbjct: 226 NSISAVDNGSLANTPHLRELHLNNN 250
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 411 GSFGSVYKGIL--DEGKTI-IAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKILTVC 466
G FG VY+G+ +G+ I +AVK +K ++E ++N+ H ++VK++ +
Sbjct: 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 82
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
++ ++ E G L +L + L L + ++ + A+
Sbjct: 83 E------EEPTWIIMELYPYGELGHYLERNKNS---------LKVLTLVLYSLQICKAMA 127
Query: 527 YLHH-DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL +C H D+ N+L+ + DFGL++ + +S+ + I +++
Sbjct: 128 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMS 182
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
P + DV+ + + + E+++
Sbjct: 183 PESINF-RRFTTASDVWMFAVCMWEILS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 411 GSFGSVYKGIL--DEGKTI-IAVKVLNLLHHGASKSS-IAECSALRNIRHKNLVKILTVC 466
G FG VY+G+ +G+ I +AVK +K ++E ++N+ H ++VK++ +
Sbjct: 19 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII 78
Query: 467 SGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALK 526
++ ++ E G L +L + L L + ++ + A+
Sbjct: 79 E------EEPTWIIMELYPYGELGHYLERNKNS---------LKVLTLVLYSLQICKAMA 123
Query: 527 YLHH-DCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIA 585
YL +C H D+ N+L+ + DFGL++ + +S+ + I +++
Sbjct: 124 YLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRLPIKWMS 178
Query: 586 PAEYGLGSEVSINGDVYSYGILLLELMT 613
P + DV+ + + + E+++
Sbjct: 179 PESINF-RRFTTASDVWMFAVCMWEILS 205
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDN 138
L L + NN L P + + L+ L N++ +S+P+G+ + L+ L + N
Sbjct: 84 ELGTLGLANNQLASL-PLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTN 141
Query: 139 QLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL 196
QL + A +L NL TL+++TN+L + L KL + L N S +L
Sbjct: 142 QLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETL 199
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 19/149 (12%)
Query: 20 LPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQ 79
L L +L+L +NQ+ + + ++L + +N L F
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVF-------------D 104
Query: 80 HLKHLD---INNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG-IGKFINLQTLHM 135
HL LD + N L P + + L+ L N+N++ +SIPAG K NLQTL +
Sbjct: 105 HLTQLDKLYLGGNQLKSL-PSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSL 162
Query: 136 WDNQLSGTISPAIGELQNLVTLAINTNKL 164
NQL A L L T+ + N+
Sbjct: 163 STNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 77 CNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMW 136
CN+ K +D + + G E L S + A L L++
Sbjct: 12 CNEGKKEVDCQGKSLDSVPSG----IPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLD 67
Query: 137 DNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSI-GNLKKLLQLYLIENFLQVSIPSS 195
NQL + +L L TL + N+L+ ++P + +L +L +LYL N L+ S+PS
Sbjct: 68 YNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSG 125
Query: 196 L-GQCQSLTTINLSYNNLSGTIPPQLMD-LTSLSVGLDLSRNQLVGSLPTEVGKLINLEI 253
+ + L + L+ N L +IP D LT+L L LS NQL +L L+
Sbjct: 126 VFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQT-LSLSTNQLQSVPHGAFDRLGKLQT 183
Query: 254 LFISRNMLECEILSTL 269
+ + N +C TL
Sbjct: 184 ITLFGNQFDCSRCETL 199
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 408 IDMGSFGSVYKGILDEGKTIIAVKVLNLLHHG--ASKSSIAECSALRNIRHKNLVKILTV 465
I GS+G VY +A+K +N + K + E + L ++ ++++ +
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 466 CSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACAL 525
D D +V E + + + P+ ++ V+ I ++
Sbjct: 96 IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKT-----------ILYNLLLGE 144
Query: 526 KYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAK 563
K++H + H DLKP+N LL+ + + + DFGLA+
Sbjct: 145 KFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 80 HLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDN 138
L L + NN L P + + L+ L N++ +S+P+G+ + L+ L + N
Sbjct: 84 ELGTLGLANNQLASL-PLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTN 141
Query: 139 QLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVS 191
QL + A +L NL TL+++TN+L + L KL + L N S
Sbjct: 142 QLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 19/149 (12%)
Query: 20 LPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQ 79
L L +L+L +NQ+ + + ++L + +N L F
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVF-------------D 104
Query: 80 HLKHLD---INNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAG-IGKFINLQTLHM 135
HL LD + N L P + + L+ L N+N++ +SIPAG K NLQTL +
Sbjct: 105 HLTQLDKLYLGGNQLKSL-PSGVFDRLTKLKELRLNTNQL-QSIPAGAFDKLTNLQTLSL 162
Query: 136 WDNQLSGTISPAIGELQNLVTLAINTNKL 164
NQL A L L T+ + N+
Sbjct: 163 STNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 16/197 (8%)
Query: 77 CNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINLQTLHMW 136
CN+ K +D + + G E L S + A L L++
Sbjct: 12 CNEGKKEVDCQGKSLDSVPSG----IPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLD 67
Query: 137 DNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSI-GNLKKLLQLYLIENFLQVSIPSS 195
NQL + +L L TL + N+L+ ++P + +L +L +LYL N L+ S+PS
Sbjct: 68 YNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLK-SLPSG 125
Query: 196 L-GQCQSLTTINLSYNNLSGTIPPQLMD-LTSLSVGLDLSRNQLVGSLP----TEVGKLI 249
+ + L + L+ N L +IP D LT+L L LS NQL S+P +GKL
Sbjct: 126 VFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQT-LSLSTNQLQ-SVPHGAFDRLGKLQ 182
Query: 250 NLEILFISRNMLECEIL 266
+ + + CEIL
Sbjct: 183 TITLFGNQFDCSRCEIL 199
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 62/149 (41%), Gaps = 32/149 (21%)
Query: 519 IDVACALK-------YLHHDCQPTTAHCDLKPSNVLLD---HEMTAHVADFGLAKLLPPA 568
+D A +K YLH + H DLKP N+LL+ + + DFGL+ A
Sbjct: 104 VDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS-----A 155
Query: 569 HLQTSSIGVK-----GTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRKRPSDIMFE 623
H + +G K GT YIAP L + DV+S G++L L+ P F
Sbjct: 156 HFE---VGGKMKERLGTAYYIAPE--VLRKKYDEKCDVWSCGVILYILLCGYPP----FG 206
Query: 624 GNMNLHNFARTVLPDHVMDIVDSTLLADD 652
G + R D D T ++D+
Sbjct: 207 GQTDQEILKRVEKGKFSFDPPDWTQVSDE 235
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 109 LIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGN 167
L+ N N++ R G+ G+ +L L + NQL+G A ++ L + NK+
Sbjct: 34 LLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI 93
Query: 168 IPPSIGNLKKLLQLYLIENFLQVSIPSSLGQCQSLTTINLSYN 210
L +L L L +N + +P S SLT++NL+ N
Sbjct: 94 SNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 16 FGFTLPNLLFLSLGFNQITGVIPSSMFNASKLEVFQVTSNNL 57
FG LP+L+ L L NQ+TG+ P++ AS ++ Q+ N +
Sbjct: 50 FG-RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 48 EVFQVTSNNLTGEVPSEFGKATKAYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLE 107
E+ +++S+ L G +P HL L++ N G+ P S ++
Sbjct: 40 ELGRISSDGLFGRLP-----------------HLVKLELKRNQLTGIEPNAFEGAS-HIQ 81
Query: 108 TLIFNSNKIFRSIPAGIGKFINLQTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGN 167
L NKI L+TL+++DNQ+S + + L +L +L + +N + N
Sbjct: 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 123/314 (39%), Gaps = 60/314 (19%)
Query: 411 GSFGSVYKGILDEGKTIIAVKVLNLLHHGASKSSIAECSALRNIR-HKNLVKILTVCSGV 469
G F VY+ A+K L +++ I E ++ + H N+V+ + S
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIG 98
Query: 470 DYKGDDFKA--LVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRINIAIDVACALKY 527
+ D +A L+ + G L E+L K +E+ L+ + I A+++
Sbjct: 99 KEESDTGQAEFLLLTELCKGQLVEFL-------KKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 528 LHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLP--PAH--------LQTSSIGV 577
+H +P H DLK N+LL ++ T + DFG A + P + L I
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 578 KGTIGYIAPAEYGLGSEVSI--NGDVYSYGILLLELMTRKRPSDIMFEGNMNLHNF-ART 634
T Y P L S I D+++ G +L L R+ P FE L +
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----FEDGAKLRIVNGKY 266
Query: 635 VLPDHVMDIVDSTLLADDEDLTITSNQRQRQARINNIMECLISVVRIGVACSMESPQDRM 694
+P H D T+ ++++ ++ V +P++R+
Sbjct: 267 SIPPH------------DTQYTV----------FHSLIRAMLQV----------NPEERL 294
Query: 695 NMTIVVHELQSIKS 708
++ VVH+LQ I +
Sbjct: 295 SIAEVVHQLQEIAA 308
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 83 HLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGI-GKFINLQTLHMWDNQLS 141
+LD+ N+ L P + + +L L NK+ +S+P G+ K +L L++ NQL
Sbjct: 32 YLDLETNSLKSL-PNGVFDELTSLTQLYLGGNKL-QSLPNGVFNKLTSLTYLNLSTNQLQ 89
Query: 142 GTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQVSIPSSL-GQCQ 200
+ +L L LA+NTN+L L +L L L +N L+ S+P + +
Sbjct: 90 SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLT 148
Query: 201 SLTTINLSYNNLSGTIP 217
SL I L N T P
Sbjct: 149 SLQYIWLHDNPWDCTCP 165
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 55/236 (23%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 9 EFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H + + + +
Sbjct: 67 HPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFH--------LSRERVFSEDRAR 111
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL YLH + + DLK N++LD + + DFGL K
Sbjct: 112 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE----------- 158
Query: 576 GVK---------GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G+K GT Y+AP +YG D + G+++ E+M + P
Sbjct: 159 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 208
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 7/158 (4%)
Query: 71 AYCVQNCNQHLKHLDINNNNFGGLLPGCICNFSITLETLIFNSNKIFRSIPAGIGKFINL 130
A C C+ +D + + G N I L + N+I + P INL
Sbjct: 11 AACPSQCSCSGTTVDCRSKRHASVPAGIPTNAQI----LYLHDNQITKLEPGVFDSLINL 66
Query: 131 QTLHMWDNQLSGTISPAIGELQNLVTLAINTNKLSGNIPPSIGNLKKLLQLYLIENFLQV 190
+ L++ NQL L L L + TN+L+ L L +L++ N L
Sbjct: 67 KELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL-T 125
Query: 191 SIPSSLGQCQSLTTINLSYNNLSGTIPPQLMD-LTSLS 227
+P + + LT + L N L +IP D L+SL+
Sbjct: 126 ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLT 162
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 55/236 (23%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 11 EFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H + + + +
Sbjct: 69 HPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFH--------LSRERVFSEDRAR 113
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL YLH + + DLK N++LD + + DFGL K
Sbjct: 114 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE----------- 160
Query: 576 GVK---------GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G+K GT Y+AP +YG D + G+++ E+M + P
Sbjct: 161 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 30/172 (17%)
Query: 447 ECSALRNIRHKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAP 506
E R ++H N+V++ S + F LV++ + G L E + + EA
Sbjct: 53 EARICRLLKHSNIVRLHDSISE-----EGFHYLVFDLVTGGELFE---DIVAREYYSEAD 104
Query: 507 KCLNFLQRINIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHE---MTAHVADFGLAK 563
+ +Q+I L+ + H Q H DLKP N+LL + +ADFGLA
Sbjct: 105 AS-HCIQQI---------LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA- 153
Query: 564 LLPPAHLQTSSIGVKGTIGYIAPA---EYGLGSEVSINGDVYSYGILLLELM 612
+ Q + G GT GY++P + G V D+++ G++L L+
Sbjct: 154 -IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPV----DIWACGVILYILL 200
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 92/236 (38%), Gaps = 55/236 (23%)
Query: 401 SFLFLCWIDMGSFGSVYKGILDEGKT--IIAVKVLN---LLHHGASKSSIAECSALRNIR 455
F +L + G+FG V ++ E T A+K+L ++ ++ E L+N R
Sbjct: 10 EFEYLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 456 HKNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRI 515
H L + ++ D V E+ + G L + H + + + +
Sbjct: 68 HPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFH--------LSRERVFSEDRAR 112
Query: 516 NIAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSI 575
++ AL YLH + + DLK N++LD + + DFGL K
Sbjct: 113 FYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE----------- 159
Query: 576 GVK---------GTIGYIAPA-----EYGLGSEVSINGDVYSYGILLLELMTRKRP 617
G+K GT Y+AP +YG D + G+++ E+M + P
Sbjct: 160 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAV------DWWGLGVVMYEMMCGRLP 209
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 530 HDCQPTTAHCDLKPSNVLLDHEM---TAHVADFGLAKLLPPAHLQTSSIGVKGTIGYIAP 586
H Q H DLKP N+LL ++ +ADFGLA + Q + G GT GY++P
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSP 193
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 26/219 (11%)
Query: 407 WIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS----------KSSIAECSALRNIRH 456
+I GS+G+V G+ EG + +V N + G + K + E L + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN 516
N++ + + + LV E M L + +H + V +P+ + +
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHD----QRIVISPQHIQYFM--- 140
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+ L LH + H DL P N+LL + DF LA+ +T +
Sbjct: 141 --YHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
+ Y AP + D++S G ++ E+ RK
Sbjct: 196 HR---WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 84/219 (38%), Gaps = 26/219 (11%)
Query: 407 WIDMGSFGSVYKGILDEGKTIIAVKVLNLLHHGAS----------KSSIAECSALRNIRH 456
+I GS+G+V G+ EG + +V N + G + K + E L + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 457 KNLVKILTVCSGVDYKGDDFKALVYEFMHNGSLEEWLHPVSGADKTVEAPKCLNFLQRIN 516
N++ + + + LV E M L + +H + V +P+ + +
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD----QRIVISPQHIQYFM--- 140
Query: 517 IAIDVACALKYLHHDCQPTTAHCDLKPSNVLLDHEMTAHVADFGLAKLLPPAHLQTSSIG 576
+ L LH + H DL P N+LL + DF LA+ +T +
Sbjct: 141 --YHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 577 VKGTIGYIAPAEYGLGSEVSINGDVYSYGILLLELMTRK 615
+ Y AP + D++S G ++ E+ RK
Sbjct: 196 HR---WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,278,630
Number of Sequences: 62578
Number of extensions: 807820
Number of successful extensions: 3852
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 557
Number of HSP's that attempted gapping in prelim test: 2182
Number of HSP's gapped (non-prelim): 1243
length of query: 741
length of database: 14,973,337
effective HSP length: 106
effective length of query: 635
effective length of database: 8,340,069
effective search space: 5295943815
effective search space used: 5295943815
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)